# terms

id: GO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aerobic respiration","termid":"GO:1903715"},{"relation_name":"regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of oxidative phosphorylation","synonyms":[{"name":"OXPHOS","type":"exact"}],"termid":"GO:0002082"}


id: GO:1905791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mechanosensory behavior.","definition_xrefs":["GOC:TermGenie","PMID:8692859","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of mechanosensory behavior","termid":"GO:1905790"},{"relation_name":"negatively_regulates","term_name":"mechanosensory behavior","termid":"GO:0007638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mechanosensory behavior","synonyms":[{"name":"down regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"down regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"down regulation of mechanosensory behavior","type":"exact"},{"name":"down regulation of mechanosensory behaviour","type":"exact"},{"name":"down-regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"down-regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"down-regulation of mechanosensory behavior","type":"exact"},{"name":"down-regulation of mechanosensory behaviour","type":"exact"},{"name":"downregulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"downregulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"downregulation of mechanosensory behavior","type":"exact"},{"name":"downregulation of mechanosensory behaviour","type":"exact"},{"name":"inhibition of behavioral response to mechanical stimulus","type":"narrow"},{"name":"inhibition of behavioural response to mechanical stimulus","type":"narrow"},{"name":"inhibition of mechanosensory behavior","type":"narrow"},{"name":"inhibition of mechanosensory behaviour","type":"narrow"},{"name":"negative regulation of behavioral response to mechanical stimulus","type":"exact"},{"name":"negative regulation of behavioural response to mechanical stimulus","type":"exact"},{"name":"negative regulation of mechanosensory behaviour","type":"exact"}],"termid":"GO:1905791"}


id: PBO:0070196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 120 pseudogene","termid":"PBO:0070196"}


id: GO:0050441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + glyoxylate + H2O = 3-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:10500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3-ethylmalate synthase activity","secondary_identifiers":["KEGG_REACTION:R01180","MetaCyc:3-ETHYLMALATE-SYNTHASE-RXN","EC:2.3.3.7"],"synonyms":[{"name":"2-ethyl-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"3-ethylmalate glyoxylate-lyase (CoA-butanoylating) activity","type":"related"},{"name":"butanoyl-CoA:glyoxylate C-butanoyltransferase (thioester-hydrolysing, 1-carboxypropyl-forming)","type":"related"}],"termid":"GO:0050441"}


id: PBO:0027159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_interphase_microtubule_nucleation","termid":"PBO:0027159"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mannan 1,3-beta-mannosidase activity (obsolete GO:0052789)","termid":"GO:0052789"}


id: PBO:0068095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 402","termid":"PBO:0068095"}


id: FYPO:0004880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more lipid metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Lipid metabolism RNAs are transcribed from genes whose products are involved in any lipid metabolic process.","definition_xrefs":["PMID:26366556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of lipid metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of lipid metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of lipid metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of lipid metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased lipid metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of lipid metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004880"}


id: GO:0001411
data:
  {"annotated_genes":["SJAG_03625","SJAG_01196","SJAG_03915","SJAG_04960","SJAG_03011","SJAG_04624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119718,119720,119722,119724,119726,119728],"is_not":false,"summary":null,"term":"GO:0001411"}]},"cv_name":"cellular_component","definition":"The end, or tip, of a fungal hypha, where polarized growth occurs during hyphal elongation.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of polarized growth","termid":"GO:0030427"},{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_03011":null,"SJAG_03625":null,"SJAG_03915":null,"SJAG_04624":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal tip","references_by_uniquename":{"PMID:30726171":null},"termid":"GO:0001411","terms_by_termid":{"GO:0001411":null}}


id: FYPO:0000681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that has abnormal morphology and contains two diploid spores.","definition_xrefs":["PMID:11156975","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","termid":"FYPO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of two-spore ascus","synonyms":[{"name":"abnormal ascospore formation resulting in formation of two-spore ascus","type":"exact"},{"name":"abnormal sporulation resulting in formation of two-spore asci","type":"exact"}],"termid":"FYPO:0000681"}


id: MONDO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-encapsulated, well defined pulmonary blastoma, composed of irregular tubular structures. It affects mostly middle-aged adults and it is rare in children. The prognosis is better compared to the biphasic pulmonary blastoma.","definition_xrefs":["NCIT:C36053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary blastoma","termid":"MONDO:0005933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelial predominant pulmonary blastoma","secondary_identifiers":["DOID:4768","UMLS:C1333420","MEDGEN:234222"],"synonyms":[{"name":"epithelial predominant pulmonary blastoma","type":"exact"}],"termid":"MONDO:0003129","xrefs":{"Monarch":{"xref_id":"0003129"}}}


id: MONDO:0968947
data:
  {"annotated_genes":["SJAG_04936"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87512],"is_not":false,"summary":null,"term":"MONDO:0968947"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder plus optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620784","UMLS:C5935605","MEDGEN:1859522"],"termid":"MONDO:0968947","terms_by_termid":{"MONDO:0968947":null},"xrefs":{"Monarch":{"xref_id":"0968947"}}}


id: PBO:0048752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 3","termid":"PBO:0048752"}


id: PBO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Prr1","termid":"PBO:0002167"}


id: GO:0061150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that divides an the renal system into a series of segments along its proximal/distal axis.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"is_a","term_name":"renal system pattern specification","termid":"GO:0072048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system segmentation","synonyms":[{"name":"urinary tract segmentation","type":"exact"}],"termid":"GO:0061150"}


id: GO:0102831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = stachyose + sucrose.","definition_xrefs":["PMID:12060258","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"stachyose synthase activity","secondary_identifiers":["MetaCyc:RXN-8287"],"termid":"GO:0102831"}


id: PATO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's being uneven in color.","definition_xrefs":["PATOC:NC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable color","synonyms":[{"name":"murky","type":"related"}],"termid":"PATO:0001515"}


id: FYPO:0006697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular methionine level","synonyms":[{"name":"increased cellular L-methionine level","type":"exact"},{"name":"increased cellular methionine level during mitotic cell cycle","type":"related"},{"name":"increased cellular methionine level during vegetative growth","type":"exact"},{"name":"increased level of methionine in cell","type":"exact"},{"name":"induced cellular methionine level","type":"exact"}],"termid":"FYPO:0006697"}


id: GO:0106011
data:
  {"annotated_genes":["SJAG_04597","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[98756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that regulates the localization of a protein to the medial cortex.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03602":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106011","terms_by_termid":{"GO:0120047":null,"GO:0140325":null}}


id: PBO:0085997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; shows homology with N-terminal end of Bul1p; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; readthrough expression includes YNR068C and the locus for this readthrough is termed BUL3; Bul3p is involved in ubiquitin-mediated sorting of plasma membrane proteins; readthrough and shortened forms of Bul3p interact with Rsp5p differently in vitro","termid":"PBO:0085997"}


id: FYPO:0001884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of Calcofluor White than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to Calcofluor White","synonyms":[{"name":"resistance to Calcofluor White during mitotic cell cycle","type":"related"},{"name":"resistance to Calcofluor White during vegetative growth","type":"exact"},{"name":"resistant to Calcofluor White","type":"exact"}],"termid":"FYPO:0001884"}


id: PR:000050526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.03c","termid":"PR:000050526"}


id: GO:1900878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900878"}


id: PBO:0046199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member C, pseudogene","termid":"PBO:0046199"}


id: MONDO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tonsillar tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"lymphoid system disorder","termid":"MONDO:0044986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"tonsillitis","secondary_identifiers":["DOID:10456","NCIT:C116006","MESH:D014069","ICD10CM:J35.01","MEDGEN:1781351","UMLS:C0740402","ICD9:474.00","SCTID:90979004"],"synonyms":[{"name":"chronic tonsillitis","type":"exact"},{"name":"inflammation of tonsil","type":"exact"},{"name":"throat infection - tonsillitis","type":"exact"},{"name":"tonsil inflammation","type":"exact"},{"name":"tonsilitis","type":"exact"}],"termid":"MONDO:0001039","xrefs":{"Monarch":{"xref_id":"0001039"}}}


id: GO:0140355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a cargo receptor and initiates endocytosis.","definition_xrefs":["PMID:15797858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cargo receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-3000074","Reactome:R-HSA-3000120","Reactome:R-HSA-3132759"],"synonyms":[{"name":"cargo","type":"related"}],"termid":"GO:0140355"}


id: MONDO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roussy-Levy syndrome","secondary_identifiers":["MEDGEN:64430","NORD:1679","icd11.foundation:1790389383","UMLS:C0205713","OMIM:180800","Orphanet:3115","SCTID:45853006","GARD:4741","ICD9:334.3"],"synonyms":[{"name":"Charcot-Marie-Tooth disease (variant)","type":"related"},{"name":"Charcot-Marie-Tooth-Roussy-levy disease","type":"related"},{"name":"HMSN I","type":"related"},{"name":"Roussy Lévy Syndrome","type":"exact"},{"name":"Roussy levy hereditary areflexic dystasia","type":"related"},{"name":"Roussy levy syndrome","type":"exact"},{"name":"Roussy-Lévy syndrome","type":"exact"},{"name":"Roussy-levy disease","type":"exact"},{"name":"Roussy-levy hereditary areflexic dystasia","type":"related"},{"name":"Roussy-levy syndrome","type":"exact"},{"name":"hereditary areflexic dystasia","type":"related"},{"name":"hereditary areflexic dystasia, Roussy-Lévy type","type":"exact"},{"name":"hereditary areflexic dystasia, Roussy-levy type","type":"exact"},{"name":"hereditary motor sensory neuropathy I","type":"related"}],"termid":"MONDO:0008392","xrefs":{"Monarch":{"xref_id":"0008392"}}}


id: MONDO:0018324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired myasthenia gravis (MG) is an autoimmune disorder of the neuromuscular junction characterized by fatigable muscle weakness with frequent ocular signs and/or generalized muscle weakness, and occasionally associated with thymoma.","definition_xrefs":["Orphanet:391490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia gravis","termid":"MONDO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"adult-onset myasthenia gravis","secondary_identifiers":["EFO:1001490","UMLS:C5680024","MEDGEN:1843050","GARD:21623"],"synonyms":[{"name":"adult-onset acquired myasthenia","type":"exact"},{"name":"adult-onset autoimmune myasthenia gravis","type":"exact"}],"termid":"MONDO:0018324","xrefs":{"Monarch":{"xref_id":"0018324"}}}


id: FYPO:0001467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases normally following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal increase in steady-state intracellular calcium level following extracellular calcium stimulus (obsolete FYPO:0001467)","synonyms":[{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001467"}


id: PBO:0081836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 771","termid":"PBO:0081836"}


id: MONDO:0016114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A bulbospinal muscular atrophy that occurs during childhood.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete bulbospinal muscular atrophy of childhood (obsolete MONDO:0016114)","secondary_identifiers":["Orphanet:206704"],"synonyms":[{"name":"bulbospinal muscular atrophy of childhood","type":"exact"},{"name":"childhood bulbospinal muscular atrophy","type":"exact"},{"name":"paediatric bulbospinal muscular atrophy","type":"exact"},{"name":"pediatric bulbospinal muscular atrophy","type":"exact"}],"termid":"MONDO:0016114","xrefs":{"Monarch":{"xref_id":"0016114"}}}


id: PBO:0111899
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain","termid":"PBO:0111899"}


id: GO:0033278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the midbrain.","definition_xrefs":["GO_REF:0000021","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in midbrain","synonyms":[{"name":"cell proliferation in mesencephalon","type":"exact"},{"name":"mesencepahalic cell proliferation","type":"related"}],"termid":"GO:0033278"}


id: GO:1902607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["PMID:23407708","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of potassium ion transmembrane transporter activity","termid":"GO:1901017"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of large conductance calcium-activated potassium channel activity","synonyms":[{"name":"down regulation of BK KCa channels","type":"exact"},{"name":"down regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"down regulation of BK channel activity","type":"related"},{"name":"down regulation of large conductance KCa channels","type":"exact"},{"name":"down regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"down-regulation of BK KCa channels","type":"exact"},{"name":"down-regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"down-regulation of BK channel activity","type":"related"},{"name":"down-regulation of large conductance KCa channels","type":"exact"},{"name":"down-regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"downregulation of BK KCa channels","type":"exact"},{"name":"downregulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"downregulation of BK channel activity","type":"related"},{"name":"downregulation of large conductance KCa channels","type":"exact"},{"name":"downregulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"inhibition of BK KCa channels","type":"narrow"},{"name":"inhibition of BK calcium-activated potassium channel activity","type":"narrow"},{"name":"inhibition of BK channel activity","type":"related"},{"name":"inhibition of large conductance KCa channels","type":"narrow"},{"name":"inhibition of large conductance calcium-activated potassium channel activity","type":"narrow"},{"name":"negative regulation of BK KCa channels","type":"exact"},{"name":"negative regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"negative regulation of BK channel activity","type":"related"},{"name":"negative regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902607"}


id: GO:0032399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a HECT, 'Homologous to the E6-AP Carboxy-Terminus', domain of a protein.","definition_xrefs":["Pfam:PF00632","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"HECT domain binding","termid":"GO:0032399"}


id: PBO:0116293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myosin-like protein associated with the nuclear envelope; nuclear basket protein that connects the nuclear pore complex (NPC) with the nuclear interior; involved with Tel1p in telomere length control; forms a coiled-coil parallel homodimer; recruitment and docking of Mlp1p filaments onto the NPC Y-complex involves Nup60p; involved along with Pml1p and Pml39p in nuclear retention of unspliced mRNAs; MLP1 has a paralog, MLP2, that arose from the whole genome duplication","termid":"PBO:0116293"}


id: RO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"during_which_starts","termid":"RO:0002088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encompasses","termid":"RO:0002085"}


id: FYPO:0005841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cortex of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein transport along microtubule to cell tip during vegetative growth","termid":"FYPO:0005828"},{"relation_name":"is_a","term_name":"normal protein localization to cell cortex of cell tip","termid":"FYPO:0006876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein transport along microtubule to cell tip cortex during vegetative growth","secondary_identifiers":["FYPO:0005829"],"synonyms":[{"name":"normal protein movement along microtubule to cell tip cortex during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell cortex of cell tip during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell tip cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005841"}


id: GO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of vanadium (V) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vanadium ion transport","termid":"GO:0015676"}


id: PBO:0039469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 17","termid":"PBO:0039469"}


id: MONDO:0100097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital alveolar dysplasia in which the cause of the disease is a mutation in the TBX4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital alveolar dysplasia","termid":"MONDO:0100077"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia due to TBX4","synonyms":[{"name":"CAD due to TBX4","type":"exact"}],"termid":"MONDO:0100097","xrefs":{"Monarch":{"xref_id":"0100097"}}}


id: GO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the LSU-rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleaveage between LSU-rRNA and 4.5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002105"}


id: GO:2000524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of T cell costimulation","termid":"GO:2000523"},{"relation_name":"negatively_regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell costimulation","synonyms":[{"name":"negative regulation of T cell co-stimulation","type":"exact"},{"name":"negative regulation of T lymphocyte costimulation","type":"exact"},{"name":"negative regulation of T-cell co-stimulation","type":"exact"},{"name":"negative regulation of T-cell costimulation","type":"exact"},{"name":"negative regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000524"}


id: MONDO:0011428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any EEC syndrome in which the cause of the disease is a mutation in the TP63 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EEC syndrome","termid":"MONDO:0010004"},{"relation_name":"is_a","term_name":"TP63-related ectodermal dysplasia spectrum with limb and orofacial malformations","termid":"MONDO:1040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome 3","secondary_identifiers":["MEDGEN:347666","MESH:C565799","OMIM:604292","UMLS:C1858562","DOID:0060783"],"synonyms":[{"name":"EEC syndrome 3","type":"exact"},{"name":"EEC syndrome caused by mutation in TP63","type":"exact"},{"name":"EEC3","type":"exact"},{"name":"TP63 EEC syndrome","type":"exact"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft LIP/palate syndrome 3","type":"related"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft Lip/palate syndrome type 3","type":"exact"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome type 3","type":"exact"}],"termid":"MONDO:0011428","xrefs":{"Monarch":{"xref_id":"0011428"}}}


id: PBO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM22 inner membrane protein import complex subunit Tim40 (predicted)","termid":"PBO:0000938"}


id: PBO:0113499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane sensor of the cell wall integrity pathway (CWI); involved in cell integrity signaling and stress response during glucose starvation and oxidative stress; structurally and functionally similar to Mid2p; MTL1 has a paralog, MID2, that arose from the whole genome duplication","termid":"PBO:0113499"}


id: PBO:0089640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox14","termid":"PBO:0089640"}


id: PBO:0079996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 34","termid":"PBO:0079996"}


id: MOD:00398
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a carbamoyl (carboxamido) group. Replacement of an amino hydrogen produces a ureido group.","definition_xrefs":["DeltaMass:56","PubMed:12203680","Unimod:5","PubMed:10978403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoylated residue","synonyms":[{"name":"Carbamyl","type":"related"},{"name":"Carbamylation","type":"exact"}],"termid":"MOD:00398"}


id: PBO:0034241
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_structural_organization_of","termid":"PBO:0034241"}


id: PBO:0089896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-aconitate 3-methyltransferase","termid":"PBO:0089896"}


id: GO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-isopropylacetanilide + OH- = N-isopropylaniline + acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-isopropylacetanilide amidohydrolase activity (obsolete GO:0034576)","termid":"GO:0034576"}


id: PATO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's one edge of its surface being wholly rolled up in another.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convolute","termid":"PATO:0001966"}


id: PR:Q9USZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02755","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1306.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1306.02","secondary_identifiers":["UniProtKB:Q9USZ0"],"synonyms":[{"name":"Spom972h-WDR6","type":"exact"}],"termid":"PR:Q9USZ0"}


id: GO:0102970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7-deoxyloganetate = H+ + 7-deoxyloganate + UDP.","definition_xrefs":["EC:2.4.1.323","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"7-deoxyloganetic acid glucosyltransferase activity","secondary_identifiers":["RHEA:39895","MetaCyc:RXN-9372"],"termid":"GO:0102970"}


id: PR:O59814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.04c gene.","definition_xrefs":["UniProtKB:O59814","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C794.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.04c","synonyms":[{"name":"Spom972h-SPCC794.04c","type":"exact"}],"termid":"PR:O59814"}


id: PR:O14108
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eta2 gene.","definition_xrefs":["UniProtKB:O14108","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein eta2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.10","synonyms":[{"name":"Spom972h-eta2","type":"exact"}],"termid":"PR:O14108"}


id: GO:0032411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a transporter.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"},{"relation_name":"is_a","term_name":"positive regulation of molecular function","termid":"GO:0044093"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transporter activity","synonyms":[{"name":"activation of transporter activity","type":"narrow"},{"name":"stimulation of transporter activity","type":"narrow"},{"name":"up regulation of transporter activity","type":"exact"},{"name":"up-regulation of transporter activity","type":"exact"},{"name":"upregulation of transporter activity","type":"exact"}],"termid":"GO:0032411"}


id: PBO:0075393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp6 transcription factor","termid":"PBO:0075393"}


id: PBO:0057904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3605","termid":"PBO:0057904"}


id: MONDO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine adnexa cancer","secondary_identifiers":["ICD9:183","ICD9:183.9","MEDGEN:509333","UMLS:C0153584","DOID:11747"],"termid":"MONDO:0001351","xrefs":{"Monarch":{"xref_id":"0001351"}}}


id: MONDO:0007994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thanatophoric dysplasia type 2","termid":"MONDO:0008547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"micromelic bone dysplasia with cloverleaf skull","secondary_identifiers":["UMLS:C1834928","MEDGEN:322531","MESH:C536429","GARD:1404","OMIM:156830"],"synonyms":[{"name":"micromelic bone dysplasia with cloverleaf skull","type":"exact"}],"termid":"MONDO:0007994","xrefs":{"Monarch":{"xref_id":"0007994"}}}


id: MONDO:0007328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroidal osteoma, bilateral","secondary_identifiers":["MEDGEN:396164","MESH:C566124","UMLS:C1861558","OMIM:118865"],"synonyms":[{"name":"choroidal osteoma, bilateral","type":"exact"}],"termid":"MONDO:0007328","xrefs":{"Monarch":{"xref_id":"0007328"}}}


id: PBO:0087109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P2 beta; a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P2 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm","termid":"PBO:0087109"}


id: MOD:01840
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to L-allo-isoleucine.","definition_xrefs":["ChEBI:43433","PubMed:20805503","RESID:AA0546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-allo-isoleucine","synonyms":[{"name":"(2S,3R)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"L-allo-isoleucine","type":"exact"},{"name":"L-threo-isoleucine","type":"exact"},{"name":"MOD_RES L-allo-isoleucine","type":"exact"},{"name":"allo-L-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:01840"}


id: FYPO:0008074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is increased during mitotic interphase.","definition_xrefs":["PMID:10930468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to medial cortical node","termid":"FYPO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to medial cortical node during interphase","termid":"FYPO:0008074"}


id: PBO:0057742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1537","termid":"PBO:0057742"}


id: PBO:0073143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 homolog A, COPII coat complex component","termid":"PBO:0073143"}


id: GO:0018447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: chloral hydrate = 3 H+ + 2 e- + trichloroacetate, and chloral hydrate + H2 = H2O + trichloroethanol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chloral hydrate dehydrogenase activity (obsolete GO:0018447)","termid":"GO:0018447"}


id: SO:0000029
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The canonical base pair, where two bases interact via WC edges, with glycosidic bonds oriented cis relative to the axis of orientation.","definition_xrefs":["PMID:12177293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base_pair","termid":"SO:0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WC_base_pair","synonyms":[{"name":"WC base pair","type":"exact"},{"name":"Watson Crick base pair","type":"exact"},{"name":"Watson-Crick base pair","type":"related"},{"name":"Watson-Crick pair","type":"exact"},{"name":"canonical base pair","type":"exact"}],"termid":"SO:0000029"}


id: PBO:0057669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260b","termid":"PBO:0057669"}


id: PBO:0051336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-38 (pseudogene)","termid":"PBO:0051336"}


id: MONDO:0700186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Histiocytic sarcoma occurring in a cat.","definition_xrefs":["NCIT:C157503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"},{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline histiocytic sarcoma","termid":"MONDO:0700186","xrefs":{"Monarch":{"xref_id":"0700186"}}}


id: GO:0046378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving enterobacterial common antigen, an acidic polysaccharide containing N-acetyl-D-glucosamine, N-acetyl-D-mannosaminouronic acid, and 4-acetamido-4,6-dideoxy-D-galactose. A major component of the cell wall outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"enterobacterial common antigen metabolic process","synonyms":[{"name":"enterobacterial common antigen metabolism","type":"exact"}],"termid":"GO:0046378"}


id: PBO:0088087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose-4-epimerase; catalyzes interconversion of UDP-galactose and UDP-D-glucose in galactose metabolism; also catalyzes conversion of alpha-D-glucose or alpha-D-galactose to their beta-anomers; human homolog GALE implicated in galactosemia, can complement yeast null mutant","termid":"PBO:0088087"}


id: MONDO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system germinoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germinoma","termid":"MONDO:0002999"},{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system germinoma","secondary_identifiers":["DOID:7867","MEDGEN:234581","NCIT:C5792","UMLS:C1370504"],"synonyms":[{"name":"adult CNS germinoma","type":"exact"},{"name":"adult central nervous system germinoma","type":"exact"},{"name":"central nervous system germinoma","type":"broad"},{"name":"central nervous system germinoma of adults","type":"exact"},{"name":"germinoma of adult CNS","type":"exact"},{"name":"germinoma of adult central nervous system","type":"exact"},{"name":"germinoma of the adult CNS","type":"exact"},{"name":"germinoma of the adult central nervous system","type":"exact"}],"termid":"MONDO:0004383","xrefs":{"Monarch":{"xref_id":"0004383"}}}


id: GO:1902663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-L-cysteine S-palmitoylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23444136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidyl-L-cysteine S-palmitoylation","termid":"GO:1902662"},{"relation_name":"is_a","term_name":"negative regulation of protein lipidation","termid":"GO:1903060"},{"relation_name":"negatively_regulates","term_name":"peptidyl-L-cysteine S-palmitoylation","termid":"GO:0018230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-L-cysteine S-palmitoylation","synonyms":[{"name":"down regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"down-regulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-L-cysteine S-palmitoylation","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"downregulation of peptidyl-cysteine S-palmitoylation","type":"exact"},{"name":"inhibition of peptidyl-L-cysteine S-palmitoylation","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"narrow"},{"name":"inhibition of peptidyl-cysteine S-palmitoylation","type":"narrow"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine biosynthetic process from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-S-palmitoyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"},{"name":"negative regulation of peptidyl-cysteine S-palmitoylation","type":"exact"}],"termid":"GO:1902663"}


id: PBO:0059324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 9","termid":"PBO:0059324"}


id: GO:0035619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tip portion of an outgrowth of a root epidermal cell.","definition_xrefs":["PMID:16567499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"},{"relation_name":"part_of","term_name":"root hair","termid":"GO:0035618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"root hair tip","synonyms":[{"name":"root hair cell tip","type":"exact"}],"termid":"GO:0035619"}


id: MONDO:0011216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hemochromatosis type 2 in which the cause of the disease is a mutation in the HJV gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemochromatosis type 2","termid":"MONDO:0019257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 2A","secondary_identifiers":["MEDGEN:356321","OMIM:602390","UMLS:C1865614","DOID:0111027"],"synonyms":[{"name":"HFE2A","type":"exact"},{"name":"HJV hemochromatosis type 2","type":"exact"},{"name":"hemochromatosis type 2 caused by mutation in HJV","type":"exact"},{"name":"hemochromatosis type 2A","type":"exact"},{"name":"hemochromatosis, juvenile","type":"related"},{"name":"hemochromatosis, type 2","type":"related"},{"name":"hemochromatosis, type 2A","type":"related"}],"termid":"MONDO:0011216","xrefs":{"Monarch":{"xref_id":"0011216"}}}


id: PBO:0057270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 494","termid":"PBO:0057270"}


id: GO:0019369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"arachidonate metabolic process","secondary_identifiers":["Reactome:R-HSA-2142753","Reactome:R-HSA-426048","Wikipedia:Arachidonic_acid"],"synonyms":[{"name":"arachidonic acid metabolic process","type":"exact"},{"name":"arachidonic acid metabolism","type":"exact"}],"termid":"GO:0019369"}


id: PATO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter exhibits an excessive accumulation of cerebral spinal fluid.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edematous","termid":"PATO:0001450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalic","termid":"PATO:0001853"}


id: GO:0102042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-2,3,7-trideoxy-D-lyxo-hept-6-ulosonic acid + H2O + NAD = 3-dehydroquinate + ammonium + NADH + H+.","definition_xrefs":["RHEA:25956","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dehydroquinate synthase activity","secondary_identifiers":["MetaCyc:RXN-10032","EC:1.4.1.24"],"termid":"GO:0102042"}


id: PBO:0057370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548al","termid":"PBO:0057370"}


id: PBO:0109826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase Sgp1/Lcb3","termid":"PBO:0109826"}


id: FYPO:0001830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing gluconate as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0005447","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on gluconate carbon source","synonyms":[{"name":"decreased growth on gluconate carbon source","type":"broad"},{"name":"decreased vegetative cell growth on gluconate carbon source","type":"exact"},{"name":"reduced cell growth on gluconate carbon source","type":"exact"},{"name":"slow cell growth on gluconate carbon source","type":"narrow"}],"termid":"FYPO:0001830"}


id: PBO:0076849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis associated actin remodelling kinase 1","termid":"PBO:0076849"}


id: MONDO:1011840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta 9-tetrahydrocannabinol seizure, non-human animal","secondary_identifiers":["OMIA:000267"],"termid":"MONDO:1011840","xrefs":{"Monarch":{"xref_id":"1011840"}}}


id: GO:0035193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reorganization of the pre-existing, functional larval central nervous system into one that can serve the novel behavioral needs of the adult. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","PMID:9647692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval central nervous system remodeling","synonyms":[{"name":"CNS metamorphosis","type":"exact"},{"name":"central nervous system metamorphosis","type":"exact"},{"name":"larval central nervous system remodelling","type":"exact"}],"termid":"GO:0035193"}


id: SO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codon TGG.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan","synonyms":[{"name":"Trp","type":"exact"},{"name":"W","type":"exact"}],"termid":"SO:0001440"}


id: PBO:0003675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein Fic1","termid":"PBO:0003675"}


id: MONDO:1012284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stomach ulcer that occurs in pigs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach ulcer, non-human animal","termid":"MONDO:1011662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomach ulcer, pig","secondary_identifiers":["OMIA:001027-9823"],"termid":"MONDO:1012284","xrefs":{"Monarch":{"xref_id":"1012284"}}}


id: PBO:0075879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 antisense RNA 1 (head to head)","termid":"PBO:0075879"}


id: GO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of an acetyl group or groups from an acetylated sterol.","definition_xrefs":["GOC:rb","PMID:18034159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0019213","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"steryl deacetylase activity","synonyms":[{"name":"sterol deacetylase activity","type":"exact"},{"name":"steryl acetyl hydrolase activity","type":"exact"}],"termid":"GO:0034084"}


id: PBO:0076828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis, prostate and placenta expressed","termid":"PBO:0076828"}


id: GO:0031384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the start of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating projection assembly","termid":"GO:0031383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of initiation of mating projection growth","termid":"GO:0031384"}


id: PBO:0031398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_conjugation","termid":"PBO:0031398"}


id: MONDO:1011496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, rabbit","secondary_identifiers":["OMIA:000327-9986"],"termid":"MONDO:1011496","xrefs":{"Monarch":{"xref_id":"1011496"}}}


id: PBO:0069147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 398, pseudogene","termid":"PBO:0069147"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: PBO:0054609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2014","termid":"PBO:0054609"}


id: PBO:0054644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2049","termid":"PBO:0054644"}


id: MONDO:0021699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders stemming from the misuse and abuse of alcohol.","definition_xrefs":["MESH:D020751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol-induced disorders","secondary_identifiers":["UMLS:C0236970","MEDGEN:65935","SCTID:719848005"],"synonyms":[{"name":"alcohol induced disorders","type":"related"},{"name":"alcohol-induced disorder","type":"related"}],"termid":"MONDO:0021699","xrefs":{"Monarch":{"xref_id":"0021699"}}}


id: PBO:0076675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A1","termid":"PBO:0076675"}


id: GO:0018445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of prothoracicotrophic hormone, a peptide hormone that is secreted by the brain and, upon receptor binding, acts on the prothoracic gland to stimulate the release of ecdysone in insects.","definition_xrefs":["GOC:mah","PMID:3301403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"positively_regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0038023","GO:0005515","GO:0003674","GO:0005488","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"prothoracicotrophic hormone activity","termid":"GO:0018445"}


id: MONDO:0011002
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86849],"is_not":false,"summary":null,"term":"MONDO:0011002"}]},"cv_name":"mondo","definition":"Any hereditary motor and sensory neuropathy type 6 in which the cause of the disease is a mutation in the MFN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"},{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy type 6","termid":"MONDO:0019551"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, type 6A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18091","OMIM:601152"],"synonyms":[{"name":"Charcot-Marie-Tooth disease, type 6","type":"broad"},{"name":"Charcot-Marie-Tooth disease, type 6A","type":"exact"},{"name":"HMSN 6A","type":"related"},{"name":"HMSN6A","type":"exact"},{"name":"MFN2 hereditary motor and sensory neuropathy type 6","type":"exact"},{"name":"hereditary motor and sensory neuropathy VIA","type":"exact"},{"name":"hereditary motor and sensory neuropathy type 6 caused by mutation in MFN2","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type 6","type":"broad"},{"name":"neuropathy, hereditary motor and sensory, type VIA","type":"exact"},{"name":"peripheral neuropathy and optic atrophy","type":"broad"}],"termid":"MONDO:0011002","terms_by_termid":{"MONDO:0011002":null},"xrefs":{"Monarch":{"xref_id":"0011002"}}}


id: PBO:0073593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOC2 leucine rich repeat scaffold protein","termid":"PBO:0073593"}


id: FYPO:0001175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing maltose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on maltose carbon source","synonyms":[{"name":"normal cell population growth on maltose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on maltose carbon source","type":"exact"}],"termid":"FYPO:0001175"}


id: GO:0016507
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multienzyme complex possessing three activities in two subunits (alpha and beta) that catalyzes three steps of the fatty acid beta-oxidation cycle within the mitochondrial matrix. The alpha subunit comprises the enoyl-CoA hydratase (ECH) and 3-hydroxyacyl-CoA dehydrogenase (HACD) activities, and the beta subunit contains the acetyl-CoA C-acyltransferase (KACT)/thiolase activity.","definition_xrefs":["PMID:29915090","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation multienzyme complex","termid":"GO:0036125"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"mitochondrial fatty acid beta-oxidation multienzyme complex","synonyms":[{"name":"fatty acid beta-oxidation multienzyme complex","type":"broad"},{"name":"trifunctional enzyme","type":"related"}],"termid":"GO:0016507"}


id: MONDO:0006892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent focal onset seizures which have sensory (i.e., olfactory, visual, tactile, gustatory, or auditory) manifestations. Partial seizures that feature alterations of consciousness are referred to as complex partial seizures (epilepsy, complex partial).","definition_xrefs":["MESH:D020937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"partial sensory epilepsy","secondary_identifiers":["UMLS:C0544645","MEDGEN:107460","DOID:3330"],"termid":"MONDO:0006892","xrefs":{"Monarch":{"xref_id":"0006892"}}}


id: MONDO:0021683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE A disease that can be transmitted from one organism to another, typically but not always by an infectious process.","gene_count":0,"genotype_count":0,"name":"obsolete transmissible disease (obsolete MONDO:0021683)","termid":"MONDO:0021683","xrefs":{"Monarch":{"xref_id":"0021683"}}}


id: GO:0015667
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA cytosine = S-adenosyl-L-homocysteine + DNA N4-methylcytosine.","definition_xrefs":["EC:2.1.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"DNA-methyltransferase activity","termid":"GO:0009008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"site-specific DNA-methyltransferase (cytosine-N4-specific) activity","secondary_identifiers":["RHEA:16857","MetaCyc:2.1.1.113-RXN"],"synonyms":[{"name":"DNA[cytosine-N4]methyltransferase activity","type":"related"},{"name":"N(4)-cytosine-specific DNA methylase activity","type":"related"},{"name":"N4-cytosine-specific DNA methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine 4-N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:DNA-cytosine N4-methyltransferase activity","type":"related"},{"name":"m4C-forming MTase activity","type":"related"},{"name":"modification methylase activity","type":"related"},{"name":"restriction-modification system activity","type":"related"}],"termid":"GO:0015667"}


id: FYPO:0006746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal at one or both cell tips.","definition_xrefs":["PMID:29689193","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall thickness during vegetative growth","termid":"FYPO:0002163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002946","FYPO:0001320"],"is_obsolete":false,"name":"decreased cell wall thickness at cell tip during vegetative growth","synonyms":[{"name":"decreased cell wall thickness at cell end during vegetative growth","type":"exact"},{"name":"decreased cell wall thickness at cell tip during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness at cell tip during vegetative growth","type":"exact"},{"name":"thin cell wall at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0006746"}


id: PBO:0031517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_binding","termid":"PBO:0031517"}


id: PBO:0063438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6A","termid":"PBO:0063438"}


id: PR:Q9UTL1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTL1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.15c","synonyms":[{"name":"COG complex subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog1","type":"exact"}],"termid":"PR:Q9UTL1"}


id: GO:0103014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ethyl-(2R)-methyl-(3S)-hydroxybutanoate + NADP = ethyl-2-methylacetoacetate + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-keto ester reductase activity (obsolete GO:0103014)","termid":"GO:0103014"}


id: MONDO:0003787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mixed germ cell neoplasm that arises from the testis during childhood.","definition_xrefs":["NCIT:C6542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed testicular germ cell cancer","termid":"MONDO:0003120"},{"relation_name":"is_a","term_name":"childhood testicular germ cell tumor","termid":"MONDO:0003758"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood testicular mixed germ cell cancer","secondary_identifiers":["DOID:6161","UMLS:C1333009","MEDGEN:272471"],"synonyms":[{"name":"childhood mixed testicular germ cell cancer","type":"exact"},{"name":"childhood testicular mixed germ cell neoplasm","type":"related"},{"name":"childhood testicular mixed germ cell tumor","type":"related"},{"name":"childhood testicular mixed germ cell tumour","type":"related"},{"name":"mixed testicular germ cell cancer of childhood","type":"exact"},{"name":"paediatric mixed testicular germ cell cancer","type":"exact"},{"name":"paediatric testicular mixed germ cell neoplasm","type":"related"},{"name":"paediatric testicular mixed germ cell tumour","type":"related"},{"name":"pediatric mixed testicular germ cell cancer","type":"exact"},{"name":"pediatric testicular mixed germ cell neoplasm","type":"related"},{"name":"pediatric testicular mixed germ cell tumor","type":"related"}],"termid":"MONDO:0003787","xrefs":{"Monarch":{"xref_id":"0003787"}}}


id: GO:0061303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cornea over time, from its formation to the mature structure. The cornea is the transparent structure that covers the anterior of the eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cornea development in camera-type eye","termid":"GO:0061303"}


id: PBO:0066749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 47","termid":"PBO:0066749"}


id: PR:P87114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft1 gene.","definition_xrefs":["UniProtKB:P87114","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.08c","synonyms":[{"name":"Fun thirty-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft1","type":"exact"}],"termid":"PR:P87114"}


id: FYPO:0007780
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119486],"is_not":false,"summary":null,"term":"FYPO:0007780"}],"single_locus_phenotype":[{"annotations":[119443,119474,119490,119495,119498,119675,119677],"is_not":false,"summary":null,"term":"FYPO:0007780"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the mycelium formed by fission yeast undergoing hyphal growth covers a smaller area than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_01787":null,"SJAG_02013":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":8,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta__pmk1delta":{"display_name":"pck1delta pmk1delta","display_uniquename":"pck1delta__pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01787","SJAG_04551"],"name":"decreased mycelial expansion","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00124","SJAG_02013","SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta","pmk1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pyp1delta","SJAG_00124delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0007780","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007780":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PR:O59760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1020.07 gene.","definition_xrefs":["UniProtKB:O59760","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C1020.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.07","synonyms":[{"name":"Spom972h-SPCC1020.07","type":"exact"}],"termid":"PR:O59760"}


id: PBO:0071319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 3","termid":"PBO:0071319"}


id: PBO:0091018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase Ryh1","termid":"PBO:0091018"}


id: PBO:0063678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 2","termid":"PBO:0063678"}


id: PBO:0043127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 1","termid":"PBO:0043127"}


id: GO:0100064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter (obsolete GO:0100064)","termid":"GO:0100064"}


id: MONDO:1012264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, dog","secondary_identifiers":["OMIA:000991-9615"],"synonyms":[{"name":"AIS, dog","type":"exact"}],"termid":"MONDO:1012264","xrefs":{"Monarch":{"xref_id":"1012264"}}}


id: PBO:0030676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_size","termid":"PBO:0030676"}


id: FYECO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which P-factor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ mating pheromone","termid":"FYECO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ P-factor","synonyms":[{"name":"P factor added","type":"exact"}],"termid":"FYECO:0000039"}


id: GO:0031446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:ef","GOC:dph","GOC:mtg_muscle","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"},{"relation_name":"regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"regulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031446"}


id: MONDO:0017958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magic syndrome","secondary_identifiers":["UMLS:C0406568","MEDGEN:590513","Orphanet:324972","GARD:13371"],"synonyms":[{"name":"mouth and genital ulcers with inflamed cartilage","type":"exact"}],"termid":"MONDO:0017958","xrefs":{"Monarch":{"xref_id":"0017958"}}}


id: PBO:0003568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane receptor Wsc1 (predicted)","termid":"PBO:0003568"}


id: PBO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2263","termid":"PBO:0054849"}


id: PBO:0003516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2","termid":"PBO:0003516"}


id: PBO:0003617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD homolog (predicted)","termid":"PBO:0003617"}


id: GO:2000628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA metabolic process","synonyms":[{"name":"regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000628"}


id: PBO:0047833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P4","termid":"PBO:0047833"}


id: PBO:0055325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2753","termid":"PBO:0055325"}


id: PBO:0077949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 8-2","termid":"PBO:0077949"}


id: GO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipid or protein within a plasma lipoprotein particle by oxidation of the lipid or one or more amino acids.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle oxidation","synonyms":[{"name":"plasma lipoprotein oxidation","type":"related"}],"termid":"GO:0034441"}


id: MONDO:1011683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprine-like generalized hypoplasia syndrome, non-human animal","secondary_identifiers":["OMIA:001502"],"termid":"MONDO:1011683","xrefs":{"Monarch":{"xref_id":"1011683"}}}


id: PBO:0060863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 6","termid":"PBO:0060863"}


id: GO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gastric acid secretion","synonyms":[{"name":"hydrochloric acid secretion","type":"narrow"}],"termid":"GO:0001696"}


id: GO:0035519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 29 of the ubiquitin monomers, is added to a protein. K29-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:17028573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K29-linked ubiquitination","synonyms":[{"name":"protein K29-linked polyubiquitination","type":"exact"}],"termid":"GO:0035519"}


id: PATO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001124 pressure value (obsolete PATO:0001124)","termid":"PATO:0001124"}


id: GO:0075247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dikaryotic spore of typically a rust fungus is produced in an aecium; in heteroecious rusts, the aeciospore is a spore stage that infects the alternate host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aeciospore formation","termid":"GO:0075247"}


id: PBO:0108568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo-type fold protein, zf-MYND type zinc finger protein, Mub1-Rad6-Ubr2 ubiquitin ligase complex Mub1","termid":"PBO:0108568"}


id: GO:0005102
data:
  {"annotated_genes":["SJAG_02264","SJAG_02233","SJAG_00891","SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70946,75036],"is_not":false,"summary":null,"term":"GO:0005102"},{"annotations":[74634,80720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001664"}]},"cv_name":"molecular_function","definition":"Binding to one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:ceb","ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00891":null,"SJAG_02233":null,"SJAG_02264":null,"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"signaling receptor binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Ligand_(biochemistry)"],"synonyms":[{"name":"receptor binding","type":"broad"},{"name":"receptor ligand","type":"narrow"},{"name":"receptor-associated protein activity","type":"related"}],"termid":"GO:0005102","terms_by_termid":{"GO:0001664":null,"GO:0005102":null}}


id: GO:0021966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a neuron that is part of the corticospinal tract is directed from the cerebral cortex layer V to the spinal cord dorsal funiculus in response to a combination of attractive and repulsive cues.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","PMID:9878731","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal tract morphogenesis","termid":"GO:0021957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance","synonyms":[{"name":"corticospinal neuron axon pathfinding","type":"exact"}],"termid":"GO:0021966"}


id: PBO:0074290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 5","termid":"PBO:0074290"}


id: SO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an unverified region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted","secondary_identifiers":["http://en.wikipedia.org/wiki/Predicted"],"termid":"SO:0000732"}


id: GO:0033689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"negatively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoblast proliferation","synonyms":[{"name":"down regulation of osteoblast proliferation","type":"exact"},{"name":"down-regulation of osteoblast proliferation","type":"exact"},{"name":"downregulation of osteoblast proliferation","type":"exact"},{"name":"inhibition of osteoblast proliferation","type":"narrow"}],"termid":"GO:0033689"}


id: GO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of production of phytoalexins as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont phytoalexin production (obsolete GO:0052463)","synonyms":[{"name":"modulation by organism of symbiont phytoalexin production","type":"exact"}],"termid":"GO:0052463"}


id: PBO:0016067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring myosin V regulator Rng8","termid":"PBO:0016067"}


id: GO:0000943
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of the retrotransposon RNA genome, reverse transcriptase, integrase, and associated molecules required for reproduction and integration of the retrotransposon into the host genome; the main structural molecule of the nucleocapsid is often a gag protein homolog.","definition_xrefs":["GOC:clt","PMID:10861903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleus","termid":"GO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"retrotransposon nucleocapsid","secondary_identifiers":["Wikipedia:Virus-like_particle"],"synonyms":[{"name":"VLP","type":"exact"},{"name":"Virus-like particle","type":"exact"}],"termid":"GO:0000943"}


id: GO:0004601
data:
  {"annotated_genes":["SJAG_00141","SJAG_04632","SJAG_00489","SJAG_01199","SJAG_03166","SJAG_04823","SJAG_02630","SJAG_02515","SJAG_03623","SJAG_05181","SJAG_01292","SJAG_01216"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79905,107114],"is_not":false,"summary":null,"term":"GO:0004601"},{"annotations":[71319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004096"},{"annotations":[99601,89746,98279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004602"},{"annotations":[63726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051920"},{"annotations":[79776,76169,95533,109150,70659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a donor + a peroxide = an oxidized donor + 2 H2O.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on peroxide as acceptor","termid":"GO:0016684"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03623":null,"SJAG_04632":null,"SJAG_04823":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"peroxidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Peroxidase","GO:0016687","Reactome:R-HSA-8933635","GO:0016693","KEGG_REACTION:R03532","Reactome:R-HSA-140359","GO:0016686","Reactome:R-HSA-209925","Reactome:R-HSA-2309773","Reactome:R-HSA-3341296","Reactome:R-HSA-209973","Reactome:R-HSA-350901","Reactome:R-HSA-6789031","Reactome:R-HSA-209815","Reactome:R-HSA-6789126","Reactome:R-HSA-1222346","GO:0016685","Reactome:R-HSA-8855490","Reactome:R-HSA-2559639","Reactome:R-HSA-5631885","Reactome:R-HSA-209840","EC:1.11.1.-"],"synonyms":[{"name":"MPO","type":"related"},{"name":"bacterial catalase-peroxidase activity","type":"narrow"},{"name":"donor:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"eosinophil peroxidase activity","type":"narrow"},{"name":"extensin peroxidase","type":"narrow"},{"name":"guaiacol peroxidase","type":"narrow"},{"name":"heme peroxidase","type":"narrow"},{"name":"horseradish peroxidase (HRP)","type":"narrow"},{"name":"japanese radish peroxidase","type":"narrow"},{"name":"lactoperoxidase activity","type":"narrow"},{"name":"myeloperoxidase activity","type":"narrow"},{"name":"oxyperoxidase activity","type":"related"},{"name":"peroxidase reaction","type":"exact"},{"name":"protoheme peroxidase","type":"narrow"},{"name":"pyrocatechol peroxidase","type":"narrow"},{"name":"scopoletin peroxidase","type":"narrow"},{"name":"secretory plant peroxidase activity","type":"narrow"},{"name":"thiocyanate peroxidase","type":"narrow"},{"name":"verdoperoxidase","type":"narrow"}],"termid":"GO:0004601","terms_by_termid":{"GO:0004096":null,"GO:0004601":null,"GO:0004602":null,"GO:0008379":null,"GO:0051920":null}}


id: PBO:0026862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere","termid":"PBO:0026862"}


id: GO:0047440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-arabinonate = glycolaldehyde + pyruvate.","definition_xrefs":["EC:4.1.2.28","RHEA:20609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-pentonate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01782","MetaCyc:4.1.2.28-RXN"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-pentonate glycolaldehyde-lyase activity","type":"related"},{"name":"2-keto-3-deoxy-D-pentonate aldolase activity","type":"related"},{"name":"3-deoxy-D-pentulosonic acid aldolase","type":"broad"}],"termid":"GO:0047440"}


id: GO:0007101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Centrosome duplication and separation in the context of a meiotic cell cycle in a male organism.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete male meiosis centrosome cycle (obsolete GO:0007101)","synonyms":[{"name":"centrosome cycle involved in male meiotic cell cycle","type":"exact"}],"termid":"GO:0007101"}


id: PBO:0072800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 6","termid":"PBO:0072800"}


id: PBO:0088713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circularly permuted 1,3-beta-glucanase","termid":"PBO:0088713"}


id: PR:P87242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HD domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain-containing protein C4G3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.17","secondary_identifiers":["UniProtKB:P87242"],"synonyms":[{"name":"Spom972h-HDDC2","type":"exact"}],"termid":"PR:P87242"}


id: MONDO:1012626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive degenerative myeloencephalopathy that occurs in dogs due to a mutation in the PNPLA8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myeloencephalopathy, non-human animal","termid":"MONDO:1011866"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive degenerative myeloencephalopathy, PNPLA8-related, dog","secondary_identifiers":["OMIA:000827-9615"],"synonyms":[{"name":"hereditary ataxia, dog","type":"related"},{"name":"myeloencephalopathy, progressive degenerative, PNPLA8-related, dog","type":"exact"}],"termid":"MONDO:1012626","xrefs":{"Monarch":{"xref_id":"1012626"}}}


id: PBO:0089103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxin family transmembrane transporter","termid":"PBO:0089103"}


id: PBO:0071114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 116","termid":"PBO:0071114"}


id: PBO:0031577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization","termid":"PBO:0031577"}


id: FYPO:0000190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"abnormal actin cortical patch localization during vegetative growth","synonyms":[{"name":"abnormal F-actin patch localization during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch location during vegetative growth","type":"related"},{"name":"abnormal actin patch localization during vegetative growth","type":"exact"}],"termid":"FYPO:0000190"}


id: MONDO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to CD45 deficiency","secondary_identifiers":["GARD:17052","DOID:0060014","MEDGEN:1842877","Orphanet:169157","UMLS:C5679579"],"synonyms":[{"name":"CD45 deficiency","type":"exact"},{"name":"T-B+ SCID due to CD45 deficiency","type":"exact"}],"termid":"MONDO:0015702","xrefs":{"Monarch":{"xref_id":"0015702"}}}


id: PBO:0072586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 8","termid":"PBO:0072586"}


id: PBO:0113098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; modifies pre-tRNAs at U47 of the variable arm; contains a consensus oleate response element (ORE) in its promoter region; forms nuclear foci upon DNA replication stress","termid":"PBO:0113098"}


id: PBO:0045808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EED pseudogene 1","termid":"PBO:0045808"}


id: PBO:0003670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER triose phosphate transmembrane transporter (predicted)","termid":"PBO:0003670"}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: PR:O14026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set2 gene.","definition_xrefs":["UniProtKB:O14026","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-36 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.02c","synonyms":[{"name":"SET domain-containing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set2","type":"exact"},{"name":"lysine N-methyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14026"}


id: FYPO:0002296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which the colony spreads laterally to a lesser extent, and grows vertically to a greater extent, resulting in a more conical shape, than a wild-type colony.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"cone-shaped colony morphology","synonyms":[{"name":"piled-up colony morphology","type":"exact"}],"termid":"FYPO:0002296"}


id: MONDO:0032737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 80, autosomal dominant","secondary_identifiers":["DOID:0112341","OMIM:618418","MEDGEN:1682111","UMLS:C5193084","Orphanet:631068"],"synonyms":[{"name":"SPASTIC PARAPLEGIA 80, AUTOSOMAL DOMINANT","type":"exact"},{"name":"SPG80","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 80","type":"exact"}],"termid":"MONDO:0032737","xrefs":{"Monarch":{"xref_id":"0032737"}}}


id: PBO:0064800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 catalytic subunit beta","termid":"PBO:0064800"}


id: PBO:0079741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBXN7 antisense RNA 1","termid":"PBO:0079741"}


id: GO:0052327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the symbiont organism mediated by a substance secreted by the other organism by a type II secretion system. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via protein secreted by type II secretion system (obsolete GO:0052327)","synonyms":[{"name":"interaction with symbiont via protein secreted by type II secretion system","type":"exact"}],"termid":"GO:0052327"}


id: PBO:0068414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanylyltransferase and 5'-phosphatase","termid":"PBO:0068414"}


id: GO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of mitochondria along microtubules in axons away from the cell body and towards the presynapse.","definition_xrefs":["PMID:24302729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of anterograde axonal transport of mitochondrion","termid":"GO:0061880"},{"relation_name":"negatively_regulates","term_name":"anterograde axonal transport of mitochondrion","termid":"GO:0098957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anterograde axonal transport of mitochondrion","synonyms":[{"name":"negative regulation of anterograde axon transport of mitochondria","type":"exact"}],"termid":"GO:0061882"}


id: MONDO:0015422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Orofaciodigital syndrome type 13 is a rare subtype of orofaciodigital syndrome, with sporadic occurrence, characterized by cardiac (mitral and tricuspid valve dysplasia) and neuropsychiatric manifestations (epilepsy, depression), in addition to oral, facial and digital malformations (lingual hamartomas, cleft lip, and brachydactyly, clinodactyly, syndactyly of hands and feet). Leukoaraiosis, on brain MRI examination, is also associated.","definition_xrefs":["Orphanet:141330"],"gene_count":0,"genotype_count":0,"name":"obsolete orofaciodigital syndrome type 13 (obsolete MONDO:0015422)","secondary_identifiers":["UMLS:C2932680","MEDGEN:420203","MESH:C548035","SCTID:763835004","GARD:10694"],"synonyms":[{"name":"Degner syndrome","type":"exact"},{"name":"OFD syndrome 13","type":"related"},{"name":"OFD13","type":"exact"},{"name":"OFDS 13","type":"related"},{"name":"oral facial digital syndrome 13","type":"related"},{"name":"oral facial digital syndrome type 13","type":"related"},{"name":"oral-facial-digital syndrome 13","type":"related"},{"name":"oral-facial-digital syndrome XIII","type":"related"},{"name":"oral-facial-digital syndrome type 13","type":"exact"},{"name":"orofaciodigital syndrome 13","type":"related"},{"name":"orofaciodigital syndrome XIII","type":"related"}],"termid":"MONDO:0015422","xrefs":{"Monarch":{"xref_id":"0015422"}}}


id: MONDO:0015199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aniridia-intellectual disability syndrome is an extremely rare autosomal dominant developmental defect of the eye described in several members of one family that is characterized by the association of moderate intellectual disability with aniridia, lens dislocation, optic nerve hypoplasia and cataracts. There have been no further descriptions in the literature since 1974.","definition_xrefs":["Orphanet:1068"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia - intellectual disability syndrome","secondary_identifiers":["UMLS:C2931243","MEDGEN:419752","GARD:5530","MESH:C536568"],"synonyms":[{"name":"Walker Dyson syndrome","type":"related"},{"name":"Walker-Dyson syndrome","type":"exact"},{"name":"aniridia associated with intellectual disability and other eye abnormalities","type":"related"},{"name":"aniridia associated with mental retardation and other eye abnormalities","type":"related"}],"termid":"MONDO:0015199","xrefs":{"Monarch":{"xref_id":"0015199"}}}


id: GO:0033545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1D-myo-inositol 1,2,3,4,5,6-hexakisphosphate, phytate, by a pathway using inositol 1,4,5-trisphosphate produced from phosphatidylinositol 4,5-biphosphate hydrolysis by phospholipase C.","definition_xrefs":["MetaCyc:PWY-6555","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate biosynthetic process","termid":"GO:0010264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process, lipid-dependent","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, lipid-dependent","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthesis, lipid-dependent","type":"exact"},{"name":"phytate biosynthetic process, lipid-dependent","type":"exact"}],"termid":"GO:0033545"}


id: GO:0075086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075086)","synonyms":[{"name":"downregulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"inhibition by host of symbiont transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"negative regulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075086"}


id: MONDO:0011728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary twitching of the eyelid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"benign essential blepharospasm","secondary_identifiers":["MEDGEN:419660","DOID:529","SCTID:59026006","UMLS:C2930898","ICD10CM:G24.5","MESH:D001764","icd11.foundation:1127235959","ICD9:333.81"],"synonyms":[{"name":"BEB","type":"related"},{"name":"benign essential blepharospasm","type":"exact"},{"name":"blepharospasm","type":"exact"},{"name":"blepharospasm, benign essential","type":"related"}],"termid":"MONDO:0011728","xrefs":{"Monarch":{"xref_id":"0011728"}}}


id: PBO:0027008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_ascospore_wall","termid":"PBO:0027008"}


id: PR:P79051
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P79051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase rhp16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.01c","synonyms":[{"name":"DNA repair protein rhp16 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RAD16 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp16","type":"exact"}],"termid":"PR:P79051"}


id: GO:0018219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of peptidyl-cysteine to form peptidyl-S-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0056"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine S-acetylation (obsolete GO:0018219)","termid":"GO:0018219"}


id: PBO:0059044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMS19 homolog, cytosolic iron-sulfur assembly component","termid":"PBO:0059044"}


id: GO:0061609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose-1-phosphate = D-glyceraldehyde + dihydroxyacetone phosphate.","definition_xrefs":["ISBN:0201090910","GOC:glycolysis","RHEA:30851","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"fructose-1-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-5656438","MetaCyc:RXN-8631","Reactome:R-HSA-70342"],"termid":"GO:0061609"}


id: GO:0004563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides.","definition_xrefs":["EC:3.2.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-N-acetylhexosaminidase activity","secondary_identifiers":["MetaCyc:3.2.1.52-RXN","Reactome:R-HSA-9035982","Reactome:R-HSA-9035983","Reactome:R-HSA-2162225","Reactome:R-HSA-9840833","Reactome:R-HSA-1638053","Reactome:R-HSA-3662344","Reactome:R-HSA-9638076","Reactome:R-HSA-3656259","Reactome:R-HSA-9035978","Reactome:R-HSA-9638078","Reactome:R-HSA-1605632","Reactome:R-HSA-9035976","Reactome:R-HSA-9840884","Reactome:R-HSA-2105001","Reactome:R-HSA-1605595","Reactome:R-HSA-9638075"],"synonyms":[{"name":"N-acetyl-beta-D-hexosaminidase activity","type":"related"},{"name":"N-acetyl-beta-glucosaminidase activity","type":"related"},{"name":"N-acetyl-beta-hexosaminidase activity","type":"related"},{"name":"N-acetylhexosaminidase activity","type":"related"},{"name":"beta-D-N-acetylhexosaminidase activity","type":"related"},{"name":"beta-D-hexosaminidase activity","type":"related"},{"name":"beta-N-acetyl-D-hexosaminidase activity","type":"related"},{"name":"beta-N-acetyl-D-hexosaminide N-acetylhexosaminohydrolase activity","type":"related"},{"name":"beta-acetylaminodeoxyhexosidase activity","type":"related"},{"name":"beta-acetylhexosaminidinase activity","type":"related"},{"name":"beta-hexosaminidase activity","type":"related"},{"name":"hexosaminidase A","type":"related"}],"termid":"GO:0004563"}


id: GO:0072266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric capsule from unspecified parts. The metanephric capsule is the tough fibrous layer surrounding the metanephros, covered in a thick layer of perinephric adipose tissue. It provides some protection from trauma and damage.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal capsule formation","termid":"GO:0072129"},{"relation_name":"part_of","term_name":"metanephric capsule morphogenesis","termid":"GO:0072265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric capsule formation","termid":"GO:0072266"}


id: PBO:0117149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNRD1 antisense RNA 1","termid":"PBO:0117149"}


id: MONDO:0003170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor affecting young people. Morphologically, it is characterized by the presence of collagenous tissue surrounding neoplastic astrocytes. In some cases the collagen is produced by the tumor cells (desmoplastic astrocytoma), whereas in others it is produced by mesenchymal cells (mixed glioma/fibroma).","definition_xrefs":["NCIT:C5419"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliofibroma","secondary_identifiers":["MEDGEN:226850","DOID:4856","ICDO:9442/1","UMLS:C1266178"],"synonyms":[{"name":"gliofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003170","xrefs":{"Monarch":{"xref_id":"0003170"}}}


id: PBO:0079482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma pseudogene, Y-linked","termid":"PBO:0079482"}


id: GO:0019236
data:
  {"annotated_genes":["SJAG_01718","SJAG_03209","SJAG_00993","SJAG_02923","SJAG_01978","SJAG_01345","SJAG_00990","SJAG_03340"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97376,106598,89574,93669,96712,92527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[71204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"},{"annotations":[105845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000749"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02923":null,"SJAG_03209":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pheromone","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pheromone response","type":"exact"}],"termid":"GO:0019236","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0071507":null}}


id: GO:1902065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an L-glutamate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23574009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to L-glutamate","termid":"GO:1902065"}


id: GO:0014063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of serotonin.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of serotonin secretion","termid":"GO:0014062"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"serotonin secretion","termid":"GO:0001820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of serotonin secretion","synonyms":[{"name":"down regulation of serotonin secretion","type":"exact"},{"name":"down-regulation of serotonin secretion","type":"exact"},{"name":"downregulation of serotonin secretion","type":"exact"},{"name":"inhibition of serotonin secretion","type":"narrow"},{"name":"positive regulation of serotonin release","type":"related"}],"termid":"GO:0014063"}


id: GO:0034104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tissue remodeling","synonyms":[{"name":"negative regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034104"}


id: PBO:0027012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_catalytic_activity","termid":"PBO:0027012"}


id: PBO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily U member 1","termid":"PBO:0052219"}


id: MONDO:1012470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pentalogy of Fallot, non-human animal","termid":"MONDO:1011650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, horse","secondary_identifiers":["OMIA:001857-9796"],"termid":"MONDO:1012470","xrefs":{"Monarch":{"xref_id":"1012470"}}}


id: GO:2000410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte migration","synonyms":[{"name":"regulation of immature T cell migration","type":"related"},{"name":"regulation of immature T lymphocyte migration","type":"related"},{"name":"regulation of immature T-cell migration","type":"related"},{"name":"regulation of immature T-lymphocyte migration","type":"related"},{"name":"regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000410"}


id: GO:0080053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylalanine","termid":"GO:0080053"}


id: GO:0086090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of an SA node cell contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in SA node cell action potential repolarization","synonyms":[{"name":"voltage-gated potassium channel activity involved in SAN cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinoatrial node cell action potential","type":"exact"},{"name":"voltage-gated potassium channel activity involved in sinus node cell action potential","type":"narrow"}],"termid":"GO:0086090"}


id: MONDO:0013271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontonasal dysplasia - severe microphthalmia - severe facial clefting syndrome","secondary_identifiers":["GARD:12640","UMLS:C3150706","OMIM:613456","MEDGEN:462056","Orphanet:306542","DOID:0081047"],"synonyms":[{"name":"ALX1-related frontonasal dysplasia","type":"exact"},{"name":"FND3","type":"related"},{"name":"frontonasal dysplasia 3","type":"related"},{"name":"frontonasal dysplasia type 3","type":"exact"}],"termid":"MONDO:0013271","xrefs":{"Monarch":{"xref_id":"0013271"}}}


id: MONDO:0044253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatoglyphics--palmar triradius d, absence of (obsolete MONDO:0044253)","secondary_identifiers":["OMIM:221760"],"synonyms":[{"name":"dermatoglyphics--palmar triradius d, absence of","type":"related"}],"termid":"MONDO:0044253","xrefs":{"Monarch":{"xref_id":"0044253"}}}


id: GO:0102047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + glycine + ATP(4-) = H+ + indole-3-acetyl-glycine + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz","PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"indole-3-acetyl-glycine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10429"],"termid":"GO:0102047"}


id: PBO:0073650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of IKBKE 1","termid":"PBO:0073650"}


id: GO:0008854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides.","definition_xrefs":["EC:3.1.11.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0003824","GO:0016787","GO:0004527","GO:0003674"],"is_obsolete":false,"name":"exodeoxyribonuclease V activity","secondary_identifiers":["MetaCyc:RXN0-2605"],"synonyms":[{"name":"E. coli exonuclease V","type":"related"},{"name":"E. coli exonuclease V activity","type":"narrow"},{"name":"Escherichia coli exonuclease V","type":"related"},{"name":"RecBC deoxyribonuclease activity","type":"related"},{"name":"exonuclease V activity","type":"related"},{"name":"gene recBC DNase activity","type":"related"},{"name":"gene recBC endoenzyme","type":"related"},{"name":"gene recBCD enzymes","type":"related"}],"termid":"GO:0008854"}


id: PBO:0075755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi repeat containing protein X-linked 2","termid":"PBO:0075755"}


id: PBO:0085638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in inserting tail-anchored proteins into ER membranes; forms a complex with Get4p; required for efficient mating; involved in shmoo formation and nuclear migration in the pre-zygote; associates with ribosomes","termid":"PBO:0085638"}


id: PBO:0048847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphate transferase subunit gamma","termid":"PBO:0048847"}


id: PBO:0087162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C11; mediates pol III RNA cleavage activity and is important for termination of transcription; homologous to TFIIS","termid":"PBO:0087162"}


id: PR:P87055
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A10.07 gene.","definition_xrefs":["UniProtKB:P87055","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A10.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.07","synonyms":[{"name":"Spom972h-SPAC57A10.07","type":"exact"}],"termid":"PR:P87055"}


id: PBO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1 pseudogene 1","termid":"PBO:0043181"}


id: PBO:0029598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium:hydrogen_antiporter_activity","termid":"PBO:0029598"}


id: PBO:0012298
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligomeric","termid":"PBO:0012298"}


id: PBO:0091911
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Coiled-coil Protein","termid":"PBO:0091911"}


id: GO:0120225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["GOC:krc","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"coenzyme A binding","synonyms":[{"name":"CoA binding","type":"exact"}],"termid":"GO:0120225"}


id: FYPO:0003315
data:
  {"alleles_by_uniquename":{"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119732],"is_not":false,"summary":null,"term":"FYPO:0003315"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable actin cables.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":1,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"actin cables absent from cell","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_04703"],"single_locus_genotype_uniquenames":["for3delta"],"synonyms":[{"name":"absent actin cables","type":"exact"},{"name":"actin cables absent from cell during mitotic cell cycle","type":"related"},{"name":"actin cables absent from cell during vegetative growth","type":"exact"},{"name":"formin-nucleated actin cables absent from cell","type":"exact"}],"termid":"FYPO:0003315","terms_by_termid":{"FYPO:0003315":null}}


id: MONDO:0002888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the intraorbital structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"orbital cancer","termid":"MONDO:0002889"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"orbit neoplasm","termid":"MONDO:0024611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraorbital meningioma","secondary_identifiers":["MEDGEN:272773","DOID:4141","NCIT:C6778","UMLS:C1334261"],"synonyms":[{"name":"intraorbital meningioma","type":"exact"}],"termid":"MONDO:0002888","xrefs":{"Monarch":{"xref_id":"0002888"}}}


id: GO:0035948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17875938","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035948)","synonyms":[{"name":"regulation of gluconeogenesis by activation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by stimulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of gluconeogenesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of glucose biosynthetic process by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of glucose biosynthetic process by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035948"}


id: MONDO:0034989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic multiple congenital anomalies/dysmorphic syndrome characterized by intrauterine and postnatal growth restriction, global developmental delay, intellectual disability, and dysmorphic facial features (such as broad nasal root, anteverted nares, long philtrum, low-set and posteriorly rotated ears, and short neck). Additional reported manifestations are microcephaly, short stature, vertebral abnormalities, joint laxity, ocular, cardiac, and renal defects, and minor limb anomalies. Brain imaging may show hypoplastic corpus callosum, delayed myelination, and cerebral atrophy.","definition_xrefs":["Orphanet:508498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-cardiac anomalies-short stature-joint laxity syndrome","secondary_identifiers":["UMLS:C5568572","MEDGEN:1799995","GARD:17948"],"termid":"MONDO:0034989","xrefs":{"Monarch":{"xref_id":"0034989"}}}


id: PBO:0082286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3p polarization-specific docking factor; required for the polarized distribution of the ADP-ribosylation factor, Arf3p; participates in polarity development and maintenance of a normal haploid budding pattern; interacts with Cnm7p","termid":"PBO:0082286"}


id: PBO:0053158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDLR antisense RNA 1","termid":"PBO:0053158"}


id: GO:0032655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-12 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-12 production","termid":"GO:0032615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-12 production","secondary_identifiers":["GO:2001182","GO:0045075"],"synonyms":[{"name":"regulation of CLMF production","type":"related"},{"name":"regulation of IL-12 production","type":"exact"},{"name":"regulation of NKSF production","type":"related"},{"name":"regulation of interleukin-12 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-12 secretion","type":"narrow"}],"termid":"GO:0032655"}


id: FYPO:0008366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance","termid":"FYPO:0008366"}


id: PBO:0109432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog","termid":"PBO:0109432"}


id: GO:1902682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in the pericentric heterochromatin.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, centromeric region","termid":"GO:0071459"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to pericentric heterochromatin","synonyms":[{"name":"protein localisation in centromeric heterochromatin","type":"exact"}],"termid":"GO:1902682"}


id: PR:O13931
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit J, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.11","synonyms":[{"name":"Spom972h-atp18","type":"exact"}],"termid":"PR:O13931"}


id: PBO:0071498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 1","termid":"PBO:0071498"}


id: PR:O60070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A set1/Ash2 histone methyltransferase complex subunit ASH2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10598:SF0","OMA:SCHPO03834","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component ash2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.08c","secondary_identifiers":["UniProtKB:O60070"],"synonyms":[{"name":"COMPASS component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lid2C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ASH2L","type":"exact"},{"name":"complex proteins associated with set1 protein ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid2 complex component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60070"}


id: MONDO:0011773
data:
  {"annotated_genes":["SJAG_03952","SJAG_04582"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054561"},{"annotations":[85877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030019"}]},"cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia that is characterized by the prenatal onset of extreme short stature, an adult height of less than 85 cm, hypodontia, and mild mental retardation.","definition_xrefs":["DOID:0050640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03952":null,"SJAG_04582":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"anauxetic dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C538256","OMIMPS:607095","DOID:0080942","MEDGEN:375972","Orphanet:93347","UMLS:C1846796","GARD:9657","icd11.foundation:1897630209"],"synonyms":[{"name":"ANXD1","type":"related"},{"name":"anauxetic dysplasia","type":"exact"},{"name":"anauxetic dysplasia 1","type":"related"},{"name":"anauxetic dysplasia type 1","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, Menger type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, anauxetic type","type":"exact"},{"name":"spondylometaepiphyseal dysplasia Menger type","type":"related"},{"name":"spondylometaepiphyseal dysplasia anauxetic type","type":"related"},{"name":"spondylometaepiphyseal dysplasia, Menger type","type":"exact"},{"name":"spondylometaepiphyseal dysplasia, anauxetic type","type":"related"}],"termid":"MONDO:0011773","terms_by_termid":{"MONDO:0030019":null,"MONDO:0054561":null},"xrefs":{"Monarch":{"xref_id":"0011773"}}}


id: GO:1902208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bacterial-type flagellum assembly.","definition_xrefs":["GOC:TermGenie","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"bacterial-type flagellum assembly","termid":"GO:0044780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of bacterial-type flagellum assembly","synonyms":[{"name":"regulation of bacterial flagellum assembly","type":"exact"}],"termid":"GO:1902208"}


id: PBO:0112867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 lysine methyltransferase Set3","termid":"PBO:0112867"}


id: PBO:0077312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 50B","termid":"PBO:0077312"}


id: FYPO:0006779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of spermidine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to spermidine","synonyms":[{"name":"resistance to spermidine during mitotic cell cycle","type":"related"},{"name":"resistance to spermidine during vegetative growth","type":"exact"},{"name":"resistant to spermidine","type":"exact"}],"termid":"FYPO:0006779"}


id: PBO:0051943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine triphosphatase","termid":"PBO:0051943"}


id: GO:0032470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum calcium ion homeostasis","termid":"GO:0032469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"positive regulation of endoplasmic reticulum calcium ion concentration","synonyms":[{"name":"elevation of ER calcium ion concentration","type":"exact"},{"name":"elevation of calcium ion concentration in endoplasmic reticulum","type":"exact"},{"name":"elevation of endoplasmic reticulum calcium ion concentration","type":"exact"},{"name":"endoplasmic reticulum calcium ion concentration elevation","type":"exact"}],"termid":"GO:0032470"}


id: GO:0008154
data:
  {"annotated_genes":["SJAG_04479","SJAG_03380","SJAG_02700","SJAG_04982","SJAG_03086","SJAG_00677","SJAG_01268","SJAG_04100","SJAG_00521","SJAG_02245","SJAG_00279","SJAG_03025","SJAG_02566","SJAG_01894","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70324,73774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[65083,99163,94164,98050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[79524,92665,80555,76057],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[67297,68426,76970,77641,79783],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Assembly or disassembly of actin filaments by the addition or removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_01268":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03380":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"actin polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0008154","terms_by_termid":{"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0051016":null}}


id: PBO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Pep5/Vps11-like (predicted)","termid":"PBO:0001872"}


id: PBO:0091739
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic TRNA thioUridylase","termid":"PBO:0091739"}


id: PBO:0088833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase","termid":"PBO:0088833"}


id: FYPO:0004844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lagging strand elongation during nuclear DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic DNA replication lagging strand elongation","synonyms":[{"name":"abnormal DNA replication lagging strand elongation during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication lagging strand elongation during vegetative growth","type":"exact"},{"name":"abnormal mitotic DNA replication lagging strand synthesis","type":"exact"}],"termid":"FYPO:0004844"}


id: PR:Q92354
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2401 gene.","definition_xrefs":["UniProtKB:Q92354","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L24-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.09c","synonyms":[{"name":"Spom972h-rpl2401","type":"exact"}],"termid":"PR:Q92354"}


id: FYPO:0005341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is decreased during a cellular response to hydroxyurea. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased chromatin binding during cellular response to hydroxyurea","synonyms":[{"name":"decreased chromatin binding during cellular response to HU","type":"exact"},{"name":"reduced chromatin binding during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005341"}


id: PBO:0036076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_mitosis","termid":"PBO:0036076"}


id: PBO:0116800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCAF12 antisense RNA 1","termid":"PBO:0116800"}


id: PBO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc2 family (predicted)","termid":"PBO:0002768"}


id: PBO:0040949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 20","termid":"PBO:0040949"}


id: GO:0060520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by androgen binding to its receptor in the urogenital sinus mesenchyme that initiates prostate induction. Prostate induction is the close range interaction of the urogenital sinus mesenchyme and the urogenital sinus epithelium that causes the cells of the urogenital sinus epithelium to change their fates and specify the development of the prostate gland.","definition_xrefs":["GOC:dph","PMID:18977204","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of prostate induction by androgen receptor signaling pathway (obsolete GO:0060520)","synonyms":[{"name":"activation of prostate induction by androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060520"}


id: GO:0008231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a heterodimer of Ecdysone receptor (EcR) and ultraspiracle (usp) plus an associated corepressor such as SMRTER, which represses transcription of target genes.","definition_xrefs":["PMID:10488333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone receptor holocomplex","termid":"GO:0008230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"repressor ecdysone receptor complex","synonyms":[{"name":"repressor ecdysone receptor holocomplex","type":"related"}],"termid":"GO:0008231"}


id: PBO:0078753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 44 homolog","termid":"PBO:0078753"}


id: PBO:0046732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"even-skipped homeobox 2","termid":"PBO:0046732"}


id: PBO:0062841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 7","termid":"PBO:0062841"}


id: FYPO:0006730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which strand elongation during nuclear DNA replication is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic DNA replication elongation","synonyms":[{"name":"abnormal DNA replication elongation during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication elongation during vegetative growth","type":"exact"},{"name":"abnormal DNA replication strand elongation","type":"exact"},{"name":"abnormal DNA strand elongation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"FYPO:0006730"}


id: GO:0008843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, endochitinases cleave randomly within the chitin chain.","definition_xrefs":["PMID:11468293","GOC:bf","GOC:kah","GOC:pde","EC:3.2.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitinase activity","termid":"GO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"endochitinase activity","secondary_identifiers":["MetaCyc:3.2.1.14-RXN"],"synonyms":[{"name":"1,4-beta-poly-N-acetylglucosaminidase","type":"exact"},{"name":"chitinase","type":"exact"},{"name":"chitodextrinase","type":"exact"},{"name":"poly-beta-glucosaminidase","type":"exact"}],"termid":"GO:0008843"}


id: GO:0021764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the amygdala over time from its initial formation until its mature state. The amygdala is an almond-shaped set of neurons in the medial temporal lobe of the brain that play a key role in processing emotions such as fear and pleasure.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","ISBN:0878937420","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amygdala development","termid":"GO:0021764"}


id: PBO:0062840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 6","termid":"PBO:0062840"}


id: PR:O94235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RAF proto-oncogene serine/threonine-protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02427","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase mph1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.01","secondary_identifiers":["UniProtKB:O94235"],"synonyms":[{"name":"Spom972h-RAF1","type":"exact"}],"termid":"PR:O94235"}


id: MONDO:0030619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 92","secondary_identifiers":["UMLS:C5562022","OMIM:619614","MEDGEN:1794232"],"synonyms":[{"name":"RP92","type":"exact"},{"name":"retinitis pigmentosa 92","type":"exact"}],"termid":"MONDO:0030619","xrefs":{"Monarch":{"xref_id":"0030619"}}}


id: PBO:0029218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_rDNA","termid":"PBO:0029218"}


id: FYPO:0002283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002283)","synonyms":[{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat shock","type":"narrow"},{"name":"protein phosphorylation abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0002283"}


id: GO:0036175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyribonucleoside diphosphate + glutaredoxin disulfide + H2O -> ribonucleoside diphosphate + glutaredoxin.","definition_xrefs":["GOC:pde","PMID:19176520","PMID:7476363","PMID:31266802","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase activity","termid":"GO:0061731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase activity, glutaredoxin disulfide as acceptor","secondary_identifiers":["Reactome:R-HSA-8866405","Reactome:R-HSA-111742"],"termid":"GO:0036175"}


id: PBO:0087258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; regulates the orientation checkpoint, the morphogenesis checkpoint and the metabolic switch from fermentative to oxidative metabolism by phosphorylating the activation loop of Kin4p, Hsl1p and Snf1p respectively; cooperates with Hsl7p in recruiting Hsl1p to the septin ring, a prerequisite for subsequent recruitment, phosphorylation, and degradation of Swe1p; forms part of the bud neck ring; regulates cytokinesis","termid":"PBO:0087258"}


id: GO:0046834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid phosphorylation","termid":"GO:0046834"}


id: PBO:0016085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any1","termid":"PBO:0016085"}


id: PBO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat","termid":"PBO:0000328"}


id: PBO:0002932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sec7 domain protein, ARF GEF (predicted)","termid":"PBO:0002932"}


id: PBO:0004466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractile ring protein Imp2","termid":"PBO:0004466"}


id: GO:0042861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of achromobactin, a citrate siderophore.","definition_xrefs":["GOC:jl","PMID:10928541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"achromobactin metabolic process","termid":"GO:0042860"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"achromobactin biosynthetic process","secondary_identifiers":["GO:0031182","GO:0031181"],"synonyms":[{"name":"achromobactin anabolism","type":"exact"},{"name":"achromobactin biosynthesis","type":"exact"},{"name":"achromobactin formation","type":"exact"},{"name":"achromobactin synthesis","type":"exact"}],"termid":"GO:0042861"}


id: PR:P15567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade6 gene.","definition_xrefs":["UniProtKB:P15567","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.13","synonyms":[{"name":"AIR carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AIRC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade6","type":"exact"}],"termid":"PR:P15567"}


id: GO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antimicrobial peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide production","termid":"GO:0002225"},{"relation_name":"is_a","term_name":"positive regulation of peptide secretion","termid":"GO:0002793"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide secretion","termid":"GO:0002794"},{"relation_name":"positively_regulates","term_name":"antimicrobial peptide secretion","termid":"GO:0002776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of antimicrobial peptide secretion","synonyms":[{"name":"activation of antimicrobial peptide secretion","type":"narrow"},{"name":"stimulation of antimicrobial peptide secretion","type":"narrow"},{"name":"up regulation of antimicrobial peptide secretion","type":"exact"},{"name":"up-regulation of antimicrobial peptide secretion","type":"exact"},{"name":"upregulation of antimicrobial peptide secretion","type":"exact"}],"termid":"GO:0002796"}


id: PBO:0042762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 55","termid":"PBO:0042762"}


id: PBO:0084081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP/GDP exchange factor for Rsr1p (Bud1p); required for both axial and bipolar budding patterns; mutants exhibit random budding in all cell types","termid":"PBO:0084081"}


id: PBO:0039178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 8 pseudogene 1","termid":"PBO:0039178"}


id: MONDO:0011831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 8","secondary_identifiers":["DOID:0110076","MESH:C564400","OMIM:607450","MEDGEN:336069","UMLS:C1843896"],"synonyms":[{"name":"ARVC8","type":"exact"},{"name":"ARVD8","type":"exact"},{"name":"DSP arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 8","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in DSP","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 8","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 8","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 8","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 8","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 8","type":"exact"}],"termid":"MONDO:0011831","xrefs":{"Monarch":{"xref_id":"0011831"}}}


id: PBO:0081027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 8","termid":"PBO:0081027"}


id: RO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has active ingredient","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active_ingredient_in'","termid":"RO:0002249"}


id: PBO:0070255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 200 pseudogene","termid":"PBO:0070255"}


id: MONDO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an impairment in the development of an individual's expressive language which is in contrast to his/her nonverbal intellect and receptive language development. The impairment may be acquired (i.e., due to a brain lesion or head trauma) or developmental (i.e., no known neurological insult).","definition_xrefs":["NCIT:C92562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressive language disorder","secondary_identifiers":["DOID:11385","ICD10CM:F80.1","SCTID:229733002","UMLS:C0236826","ICD9:315.31","MEDGEN:452300"],"synonyms":[{"name":"developmental expressive language disorder","type":"exact"},{"name":"expressive language disorder","type":"exact"}],"termid":"MONDO:0001276","xrefs":{"Monarch":{"xref_id":"0001276"}}}


id: PBO:0070303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 9","termid":"PBO:0070303"}


id: GO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an amino group from L-tyrosine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete L-tyrosine aminotransferase activity (obsolete GO:0070547)","termid":"GO:0070547"}


id: GO:0048217
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The gel-like pectin matrix consists of the interlinked acidic and neutral pectin networks that are further cross-linked by calcium bridges. Pectins consist largely of long chains of mostly galacturonic acid units (typically 1,4 linkages and sometimes methyl esters). Three major pectic polysaccharides (homogalacturonan, rhamnogalacturonan I and rhamnogalacturonan II) are thought to occur in all primary cell walls.","definition_xrefs":["PMID:11554482","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"pectic matrix","termid":"GO:0048217"}


id: GO:0048359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage metabolic process","termid":"GO:0010191"},{"relation_name":"part_of","term_name":"seed coat development","termid":"GO:0010214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage metabolic process involved in seed coat development","synonyms":[{"name":"mucilage metabolic process during seed coat development","type":"related"},{"name":"mucilage metabolism during seed coat development","type":"exact"}],"termid":"GO:0048359"}


id: MONDO:0007504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thickened earlobes-conductive deafness syndrome is characterized by microtia with thickened ear lobes, micrognathia and conductive hearing loss due to congenital ossicular anomalies. It has been described in two families. The mode of inheritance is autosomal dominant.","definition_xrefs":["Orphanet:2405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thickened earlobes-conductive deafness syndrome","secondary_identifiers":["UMLS:C1851896","OMIM:128980","SCTID:722476007","GARD:2195","MEDGEN:343676"],"synonyms":[{"name":"Escher Hirt syndrome","type":"related"},{"name":"Escher-Hirt syndrome","type":"exact"},{"name":"earlobes, thickened, with conductive deafness from incudostapedial abnormalities","type":"related"}],"termid":"MONDO:0007504","xrefs":{"Monarch":{"xref_id":"0007504"}}}


id: MONDO:0010546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central incisors, absence of","secondary_identifiers":["UMLS:C1844886","MEDGEN:337110","OMIM:302400"],"synonyms":[{"name":"central incisors, absence of","type":"exact"}],"termid":"MONDO:0010546","xrefs":{"Monarch":{"xref_id":"0010546"}}}


id: FYPO:0007844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monomethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:17363370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 monomethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 monomethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 monomethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007844"}


id: PBO:0058335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4709","termid":"PBO:0058335"}


id: FYPO:0001802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to caffeine (obsolete FYPO:0001802)","synonyms":[{"name":"elongated cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"elongated in response to caffeine","type":"exact"}],"termid":"FYPO:0001802"}


id: GO:0010670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving dioxygen (O2), or any of the reactive oxygen species, e.g. superoxide anions (O2-), hydrogen peroxide (H2O2), and hydroxyl radicals (-OH).","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of oxygen and reactive oxygen species metabolic process (obsolete GO:0010670)","synonyms":[{"name":"positive regulation of oxygen and reactive oxygen species metabolic process","type":"exact"}],"termid":"GO:0010670"}


id: PBO:0000426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA Z5","termid":"PBO:0000426"}


id: PBO:0045317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 2","termid":"PBO:0045317"}


id: PBO:0072198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 15","termid":"PBO:0072198"}


id: PBO:0085255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagic vesicle formation; also required for vesicle formation during pexophagy and the cytoplasm-to-vaucole targeting (Cvt) pathway; involved in Atg9p cycling between the phagophore assembly site and mitochondria; contains an APT1 domain that binds phosphatidylinositol-3-phosphate; essential for cell cycle progression from G2/M to G1 under nitrogen starvation; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085255"}


id: GO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of neuroblast polarity","secondary_identifiers":["GO:0043340","GO:0043343"],"synonyms":[{"name":"establishment of neuroblast cell polarity","type":"exact"}],"termid":"GO:0045200"}


id: GO:1901913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of capsule organization","synonyms":[{"name":"regulation of capsule organisation","type":"exact"},{"name":"regulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901913"}


id: PBO:0076481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAPT1 antisense RNA 1 (head to head)","termid":"PBO:0076481"}


id: GO:0006680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosylceramides, any compound formed by the replacement of the glycosidic hydroxyl group of a cyclic form of glucose by a ceramide group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylceramide metabolic process","termid":"GO:0006678"},{"relation_name":"is_a","term_name":"glycosylceramide catabolic process","termid":"GO:0046477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glucosylceramide catabolic process","synonyms":[{"name":"glucosylceramide breakdown","type":"exact"},{"name":"glucosylceramide catabolism","type":"exact"},{"name":"glucosylceramide degradation","type":"exact"}],"termid":"GO:0006680"}


id: GO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21781281"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of voltage-gated sodium channel activity in another organism (obsolete GO:0044489)","synonyms":[{"name":"negative regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044489"}


id: MONDO:0030976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor-abducens synkinesis","secondary_identifiers":["MEDGEN:1789067","OMIM:619215","UMLS:C5543116"],"synonyms":[{"name":"OCABSN","type":"exact"}],"termid":"MONDO:0030976","xrefs":{"Monarch":{"xref_id":"0030976"}}}


id: PBO:0004536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp12-like (predicted)","termid":"PBO:0004536"}


id: MONDO:0019327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"phakomatosis spilorosea","secondary_identifiers":["icd11.foundation:1064958823","Orphanet:79485","SCTID:703285005","ICD9:759.6","UMLS:C3839763","MEDGEN:825608","GARD:19025"],"synonyms":[{"name":"phakomatosis pigmentovascularis type 3","type":"exact"}],"termid":"MONDO:0019327","xrefs":{"Monarch":{"xref_id":"0019327"}}}


id: MOD:00145
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues iron atom to tetrakis-L-cysteinyl iron.","definition_xrefs":["PubMed:1303768","RESID:AA0136","PubMed:2244884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl iron","synonyms":[{"name":"METAL Iron","type":"exact"},{"name":"tetrakis(cysteinato-kappaS)-iron","type":"exact"},{"name":"tetrakis-L-cysteinyl iron","type":"exact"}],"termid":"MOD:00145"}


id: GO:0050017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + HCN = sulfide + L-3-cyanoalanine.","definition_xrefs":["MetaCyc:L-3-CYANOALANINE-SYNTHASE-RXN","EC:4.4.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"L-3-cyanoalanine synthase activity","secondary_identifiers":["RHEA:17821"],"synonyms":[{"name":"L-cysteine hydrogen-sulfide-lyase (adding HCN)","type":"related"},{"name":"L-cysteine hydrogen-sulfide-lyase (adding hydrogen cyanide; L-3-cyanoalanine-forming)","type":"related"},{"name":"beta-cyano-L-alanine synthase activity","type":"related"},{"name":"beta-cyanoalanine synthase activity","type":"related"},{"name":"beta-cyanoalanine synthetase activity","type":"related"}],"termid":"GO:0050017"}


id: MONDO:0015923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of peripheral neuropathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"acquired peripheral neuropathy","secondary_identifiers":["GARD:20243","UMLS:C5680596","Orphanet:182086","MEDGEN:1842976"],"synonyms":[{"name":"acquired peripheral neuropathy","type":"exact"}],"termid":"MONDO:0015923","xrefs":{"Monarch":{"xref_id":"0015923"}}}


id: MONDO:0007892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lenz-Majewski hyperostotic dwarfism is an extremely rare syndrome associating dwarfism, characteristic facial appearance, cutis laxa and progressive bone sclerosis.","definition_xrefs":["Orphanet:2658"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lenz-Majewski hyperostotic dwarfism","secondary_identifiers":["icd11.foundation:1509425242","GARD:3223","MESH:C537115","OMIM:151050","UMLS:C0432269","DOID:0111507","MEDGEN:98483"],"synonyms":[{"name":"LMHD","type":"related"},{"name":"Lenz Majewski hyperostotic dwarfism","type":"related"},{"name":"Lenz-Majewski hyperostotic dwarfism","type":"exact"},{"name":"Lenz-Majewski hyperostotic dysplasia","type":"related"},{"name":"Lenz-Majewski syndrome","type":"related"},{"name":"hyperostotic dwarfism Lenz-Majewski type","type":"related"},{"name":"multiple congenital anomalies, intellectual disability and progressive skeletal sclerosis","type":"related"},{"name":"multiple congenital anomalies, mental retardation and progressive skeletal sclerosis","type":"related"}],"termid":"MONDO:0007892","xrefs":{"Monarch":{"xref_id":"0007892"}}}


id: PBO:0003773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp4","termid":"PBO:0003773"}


id: GO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An N-terminal peptidyl-proline dimethylation process that contributes to translation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-proline dimethylation involved in translation (obsolete GO:0071891)","termid":"GO:0071891"}


id: GO:0006753
data:
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id: PBO:0084979
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; involved in the detoxification of acetaldehyde, glycolaldehyde, furfural, formaldehyde and propionaldehyde; localizes to the endoplasmic reticulum; member of the classical short-chain dehydrogenase/reductase (SDR) family","termid":"PBO:0084979"}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: MONDO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Argentine hemorrhagic fever (obsolete MONDO:0000277)","termid":"MONDO:0000277","xrefs":{"Monarch":{"xref_id":"0000277"}}}


id: PBO:0044370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoglobin","termid":"PBO:0044370"}


id: PATO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having parallel chains in undulate fashion on the border.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curled","termid":"PATO:0000405"}


id: MONDO:0011019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of total alopecia (present at birth), mild intellectual deficit and hypergonadotropic hypogonadism.","definition_xrefs":["Orphanet:1014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia-intellectual disability-hypergonadotropic hypogonadism syndrome","secondary_identifiers":["OMIM:601217","MESH:C563370","GARD:16553","SCTID:720981000","UMLS:C1832593","MEDGEN:321990"],"synonyms":[{"name":"Devriendt-Vandenberghe-Fryns syndrome","type":"exact"},{"name":"alopecia-intellectual disability syndrome with convulsions and hypergonadotropic hypogonadism","type":"related"},{"name":"alopecia-mental retardation syndrome with convulsions and hypergonadotropic hypogonadism","type":"related"}],"termid":"MONDO:0011019","xrefs":{"Monarch":{"xref_id":"0011019"}}}


id: PBO:0050117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 27","termid":"PBO:0050117"}


id: PBO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein (predicted)","termid":"PBO:0000856"}


id: MONDO:0010226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 2","secondary_identifiers":["MESH:C535601","NANDO:1200404","MEDGEN:341190","OMIM:300018","GARD:9159","UMLS:C1848296","DOID:0111777"],"synonyms":[{"name":"46,XY SEX reversal 2","type":"related"},{"name":"46,XY Sex reversal type 2","type":"exact"},{"name":"46,XY Sex reversal, Dax1-related","type":"related"},{"name":"46,XY sex reversal 2","type":"exact"},{"name":"46XY sex reversal 2, dosage-sensitive","type":"exact"},{"name":"SRXY2","type":"related"},{"name":"dosage-sensitive Sex reversal","type":"related"}],"termid":"MONDO:0010226","xrefs":{"Monarch":{"xref_id":"0010226"}}}


id: PBO:0108898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 11","termid":"PBO:0108898"}


id: GO:0070094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of glucagon.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucagon secretion","termid":"GO:0070092"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"glucagon secretion","termid":"GO:0070091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of glucagon secretion","synonyms":[{"name":"activation of glucagon secretion","type":"narrow"},{"name":"stimulation of glucagon secretion","type":"narrow"},{"name":"up regulation of glucagon secretion","type":"exact"},{"name":"up-regulation of glucagon secretion","type":"exact"},{"name":"upregulation of glucagon secretion","type":"exact"}],"termid":"GO:0070094"}


id: GO:0001853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3dg product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"complement component C3dg binding","termid":"GO:0001853"}


id: MONDO:0015929
data:
  {"annotated_genes":["SJAG_01065","SJAG_03847","SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[86534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[87171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory or thoracic malformation","termid":"MONDO:0020001"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01065":null,"SJAG_01370":null,"SJAG_03847":null},"genotype_count":0,"is_obsolete":false,"name":"thoracic malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842414","Orphanet:182108","NANDO:2201008","UMLS:C5680597","GARD:20248"],"termid":"MONDO:0015929","terms_by_termid":{"MONDO:0009670":null,"MONDO:0054565":null,"MONDO:0100104":null},"xrefs":{"Monarch":{"xref_id":"0015929"}}}


id: MONDO:0030480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 119","secondary_identifiers":["OMIM:619615","MEDGEN:1794233","UMLS:C5562023"],"synonyms":[{"name":"DFNB119","type":"exact"},{"name":"deafness, autosomal recessive 119","type":"narrow"}],"termid":"MONDO:0030480","xrefs":{"Monarch":{"xref_id":"0030480"}}}


id: GO:0045291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of two independently transcribed RNAs, where the one that provides the 5' portion of the final mRNA is from a splice leader RNA (SL-RNA). The SL-RNA, or mini-exon donor sequence, is added to the 5'-end of the acceptor RNA molecule which provides the mRNA body.","definition_xrefs":["GOC:krc","ISBN:0879695897","PMID:2675423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA trans splicing, via spliceosome","termid":"GO:0000365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA trans splicing, SL addition","synonyms":[{"name":"nuclear mRNA trans splicing, SL addition","type":"exact"},{"name":"nuclear mRNA trans splicing, spliced leader addition","type":"exact"}],"termid":"GO:0045291"}


id: GO:0032938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to oxidative stress","termid":"GO:0032938"}


id: MONDO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"FLOTCH syndrome is a rare, genetic, cutaneous disorder characterized by leuchonychia and multiple, recurrent pilar cysts, associated or not with ciliar dystrophy and/or koilonychia. Renal calculi have also been reported.","definition_xrefs":["Orphanet:2045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLOTCH syndrome","secondary_identifiers":["MEDGEN:419074","MESH:C537065","GARD:2346","UMLS:C2931411"],"synonyms":[{"name":"familial occurrence of total leukonychia, trichilemmal cysts and ciliary dystrophy with dominant autosomal heredity","type":"related"},{"name":"leukonychia totalis-trichilemmal cysts-ciliary dystrophy syndrome","type":"exact"}],"termid":"MONDO:0016083","xrefs":{"Monarch":{"xref_id":"0016083"}}}


id: PR:O36024
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.12","synonyms":[{"name":"Spom972h-fta1","type":"exact"},{"name":"sim4 complex subunit fta1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36024"}


id: FYPO:0000427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G1 to G0 transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal G1 to G0 transition","synonyms":[{"name":"abnormal G1/G0 transition","type":"exact"},{"name":"abnormal cell cycle quiescence","type":"related"},{"name":"abnormal establishment of cell quiescence","type":"exact"}],"termid":"FYPO:0000427"}


id: MONDO:0004567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Decrease in peristalsis in the absence of a mechanical bowel obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ileus","secondary_identifiers":["SCTID:710572000","UMLS:C1258215","DOID:8440","MESH:D045823","MEDGEN:219874","NCIT:C37979"],"synonyms":[{"name":"ileus of intestine","type":"exact"}],"termid":"MONDO:0004567","xrefs":{"Monarch":{"xref_id":"0004567"}}}


id: PBO:0061296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptides B and W receptor 1","termid":"PBO:0061296"}


id: PBO:0036375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr10","termid":"PBO:0036375"}


id: PBO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to regulate endocytosis of plasma membrane proteins; regulates by recruiting the ubiquitin ligase Rsp5p to its target in the plasma membrane; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086098"}


id: SO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U12 small nuclear (snRNA), together with U4atac/U6atac, U5, and U11 snRNAs and associated proteins, forms a spliceosome that cleaves a divergent class of low-abundance pre-mRNA introns.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U12_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U12_snRNA"],"synonyms":[{"name":"U12 small nuclear RNA","type":"exact"},{"name":"U12 snRNA","type":"exact"},{"name":"small nuclear RNA U12","type":"exact"},{"name":"snRNA U12","type":"exact"}],"termid":"SO:0000399"}


id: PBO:0058817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7974","termid":"PBO:0058817"}


id: PBO:0066212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 5","termid":"PBO:0066212"}


id: PBO:0045358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidase 2","termid":"PBO:0045358"}


id: PBO:0072485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 14","termid":"PBO:0072485"}


id: PBO:0076251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 pseudogene 2","termid":"PBO:0076251"}


id: PBO:0070044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear","termid":"PBO:0070044"}


id: PBO:0046451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl-prolyl-tRNA synthetase 1","termid":"PBO:0046451"}


id: PBO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd1","termid":"PBO:0002564"}


id: GO:0019292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tyrosine from other compounds, including chorismate, via the intermediate 4-hydroxyphenylpyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine biosynthetic process","termid":"GO:0006571"},{"relation_name":"is_a","term_name":"chorismate metabolic process","termid":"GO:0046417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","secondary_identifiers":["MetaCyc:TYRSYN"],"synonyms":[{"name":"L-tyrosine anabolism from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine biosynthetic process from chorismate via p-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine formation from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"L-tyrosine synthesis from chorismate via 4-hydroxyphenylpyruvate","type":"exact"},{"name":"tyrosine biosynthetic process from chorismate via 4-hydroxyphenylpyruvate","type":"broad"}],"termid":"GO:0019292"}


id: PBO:0068969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 213, pseudogene","termid":"PBO:0068969"}


id: GO:0032784
data:
  {"annotated_genes":["SJAG_01707","SJAG_01149","SJAG_02057","SJAG_01213","SJAG_01151","SJAG_00150","SJAG_03061","SJAG_03118","SJAG_03967"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"},{"annotations":[80125,70630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[117293,106367,71901,71350,78428,79935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01707":null,"SJAG_02057":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of DNA-templated transcription elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"regulation of DNA-templated transcription, elongation","type":"exact"},{"name":"regulation of RNA elongation","type":"broad"},{"name":"regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"regulation of transcriptional elongation","type":"broad"},{"name":"transcription elongation regulator activity","type":"related"}],"termid":"GO:0032784","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0034244":null}}


id: GO:0019385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of methane, a colorless, odorless, flammable gas with the formula CH4, from other components, including acetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanogenesis, from acetate","secondary_identifiers":["MetaCyc:METH-ACETATE-PWY"],"synonyms":[{"name":"methane biosynthesis from acetate","type":"exact"},{"name":"methane biosynthetic process from acetate","type":"exact"}],"termid":"GO:0019385"}


id: GO:0048760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a parenchymal cell. Parenchymal cells are the most abundant and versatile cells in plants. They have very few distinguishing characteristics and botanists classify them as any cell type that cannot be assigned to any other structural or functional class. They can redifferentiate and dedifferentiate and are involved in storage, basic metabolism and other processes. The cells are polyhedral, typically with thin, non-lignified cellulose cell walls and nucleate living protoplasm. They vary in size, form, and wall structure.","definition_xrefs":["ISBN:069716957X","GOC:jid","PO:0005421","CL:0000668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant parenchymal cell differentiation","synonyms":[{"name":"parenchymal cell differentiation","type":"exact"}],"termid":"GO:0048760"}


id: PBO:0056025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 3","termid":"PBO:0056025"}


id: PBO:0077987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 9-1","termid":"PBO:0077987"}


id: GO:0052546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"},{"relation_name":"part_of","term_name":"plant-type cell wall organization","termid":"GO:0009664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall pectin metabolic process","synonyms":[{"name":"cell wall pectin metabolism","type":"exact"},{"name":"cellulose and pectin-containing cell wall pectin metabolic process","type":"exact"},{"name":"pectin metabolism during cell wall biogenesis","type":"exact"},{"name":"plant-type cell wall pectin metabolic process","type":"exact"}],"termid":"GO:0052546"}


id: MONDO:0006882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of one or both testes due to viral or bacterial infections. Signs and symptoms include enlargement or tenderness of the affected testis, inguinal lymphadenopathy, blood in the semen, and pain during urination, intercourse, or ejaculation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orchitis","secondary_identifiers":["ICD10CM:N45.2","DOID:2518","MedDRA:10031064","HP:0100796","NCIT:C97145","SCTID:274718005","UMLS:C0029191","MEDGEN:18191","MESH:D009920","EFO:1001078"],"synonyms":[{"name":"Inflammation of testis","type":"exact"},{"name":"Orchititis","type":"exact"},{"name":"inflammation of testis","type":"exact"},{"name":"orchitis","type":"exact"},{"name":"orchitis (disease)","type":"exact"},{"name":"testis inflammation","type":"exact"},{"name":"testisitis","type":"exact"}],"termid":"MONDO:0006882","xrefs":{"Monarch":{"xref_id":"0006882"}}}


id: GO:0044492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the activity of a voltage-gated sodium channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","GOC:jl","PMID:21781281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of ion channel activity","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of voltage-gated sodium channel activity","synonyms":[{"name":"envenomation resulting in modulation of voltage-gated sodium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in modulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044492"}


id: PBO:0052925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-8","termid":"PBO:0052925"}


id: MONDO:0014941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, with impaired proprioception and touch","secondary_identifiers":["UMLS:C4310692","MEDGEN:934659","OMIM:617146"],"synonyms":[{"name":"DAIPT","type":"exact"},{"name":"arthrogryposis, distal, with impaired proprioception and touch","type":"exact"},{"name":"arthrogryposis, distal, with impaired proprioception and touch; DAIPT","type":"exact"}],"termid":"MONDO:0014941","xrefs":{"Monarch":{"xref_id":"0014941"}}}


id: PR:O94629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro1 gene.","definition_xrefs":["UniProtKB:O94629","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.11","synonyms":[{"name":"Spom972h-sro1","type":"exact"}],"termid":"PR:O94629"}


id: GO:1990355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of L-methionine from methionine sulphoxide.","definition_xrefs":["PMID:24118096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-methionine salvage from methionine sulphoxide","synonyms":[{"name":"methionine salvage from methionine sulphoxide","type":"broad"}],"termid":"GO:1990355"}


id: PATO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is higher than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased sensitivity toward","synonyms":[{"name":"high sensitivity toward","type":"exact"},{"name":"increased sensitivity","type":"exact"}],"termid":"PATO:0001549"}


id: PBO:0059702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 10","termid":"PBO:0059702"}


id: PBO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 14","termid":"PBO:0047360"}


id: PBO:0047831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P2","termid":"PBO:0047831"}


id: MONDO:0957815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without epilepsy","secondary_identifiers":["OMIM:620540","UMLS:C5882702","MEDGEN:1848555"],"termid":"MONDO:0957815","xrefs":{"Monarch":{"xref_id":"0957815"}}}


id: PBO:0081408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 256","termid":"PBO:0081408"}


id: MOD:00808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-galactosylserine.","definition_xrefs":["PubMed:666730","RESID:AA0400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"galactosylated residue","termid":"MOD:00476"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Gal) serine","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"O-galactosyl-L-serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O3-galactosylserine","type":"exact"},{"name":"OGalSer","type":"exact"}],"termid":"MOD:00808"}


id: PBO:0044197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin F","termid":"PBO:0044197"}


id: GO:0050511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate + UDP-N-acetyl-alpha-D-glucosamine = beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamm-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate + H+ + UDP.","definition_xrefs":["RHEA:23192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8976"],"synonyms":[{"name":"MurG transferase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:N-acetyl-alpha-D-muramyl(oyl-L-Ala- gamma-D-Glu-L-Lys-D-Ala-D-Ala)-diphosphoundecaprenol beta-1,4-N-acetylglucosaminlytransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase activity","type":"related"},{"name":"undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase activity","type":"related"},{"name":"undecaprenyldiphospho-muramoylpentapeptide b-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0050511"}


id: FYECO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing glycerol and ethanol as the carbon sources, yeast extract and other components.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol and ethanol rich medium","synonyms":[{"name":"YCEG","type":"narrow"},{"name":"YEGES","type":"narrow"},{"name":"glycerol + ethanol YE","type":"related"},{"name":"glycerol and ethanol YE","type":"related"},{"name":"non-fermentable glycerol and ethanol rich medium","type":"exact"},{"name":"nonfermentable glycerol and ethanol rich medium","type":"exact"}],"termid":"FYECO:0000139"}


id: PBO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1P (pseudogene)","termid":"PBO:0051089"}


id: PBO:0085983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for efficient 5' processing of mitochondrial tRNAs, for respiratory growth and mitochondrial genome maintenance; localizes to the matrix side of the inner mitochondrial membrane","termid":"PBO:0085983"}


id: PR:P87059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermembrane space import and assembly protein 40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21622:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space import and assembly protein 40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.11c","secondary_identifiers":["UniProtKB:P87059"],"synonyms":[{"name":"SPAC57A10.11c","type":"related"},{"name":"Spom972h-CHCHD4","type":"exact"},{"name":"mitochondrial import inner membrane translocase TIM40 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim40","type":"related"}],"termid":"PR:P87059"}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: GO:0034672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the pronephros along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in pronephros development","synonyms":[{"name":"anterior/posterior pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0034672"}


id: GO:1902757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bis(molybdopterin guanine dinucleotide)molybdenum.","definition_xrefs":["GO_REF:0000068","GOC:dph","GOC:TermGenie","PMID:23201473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolic process","synonyms":[{"name":"bis(molybdopterin guanine dinucleotide)molybdenum metabolism","type":"exact"}],"termid":"GO:1902757"}


id: MONDO:0019818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral malformation","termid":"MONDO:0016582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft mitral valve","secondary_identifiers":["MEDGEN:473080","UMLS:C0344772","Orphanet:95465","GARD:19267"],"termid":"MONDO:0019818","xrefs":{"Monarch":{"xref_id":"0019818"}}}


id: PBO:0034547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization_to_nucleus","termid":"PBO:0034547"}


id: PATO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001048 relative resistance (obsolete PATO:0001048)","termid":"PATO:0001048"}


id: PBO:0081365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 202","termid":"PBO:0081365"}


id: GO:2001178
data:
  {"annotated_genes":["SJAG_03421","SJAG_00973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88556,106017],"is_not":false,"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"positively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001178","terms_by_termid":{"GO:2001178":null}}


id: MONDO:0032917
data:
  {"annotated_genes":["SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87061],"is_not":false,"summary":null,"term":"MONDO:0032917"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 76","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18154","MEDGEN:1710038","UMLS:C5394080","OMIM:618787","DOID:0112167"],"synonyms":[{"name":"DEAFNESS, AUTOSOMAL DOMINANT 76","type":"narrow"},{"name":"DFNA76","type":"narrow"},{"name":"deafness, autosomal dominant 76","type":"narrow"}],"termid":"MONDO:0032917","terms_by_termid":{"MONDO:0032917":null},"xrefs":{"Monarch":{"xref_id":"0032917"}}}


id: PBO:0075625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 2","termid":"PBO:0075625"}


id: GO:1900645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chanoclavine-I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chanoclavine-I biosynthetic process (obsolete GO:1900645)","synonyms":[{"name":"activation of chanoclavine-I anabolism","type":"exact"},{"name":"activation of chanoclavine-I biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I formation","type":"exact"},{"name":"activation of chanoclavine-I synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I formation","type":"exact"},{"name":"positive regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I formation","type":"exact"},{"name":"up regulation of chanoclavine-I synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I formation","type":"exact"},{"name":"up-regulation of chanoclavine-I synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I formation","type":"exact"},{"name":"upregulation of chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900645"}


id: GO:0005082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein tyrosine phosphatase signaling protein activity (obsolete GO:0005082)","synonyms":[{"name":"receptor signaling protein tyrosine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein tyrosine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005082"}


id: MONDO:0006227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the stomach. The vast majority of cases arise from the corpus-fundus region. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent. It may be associated with autoimmune chronic atrophic gastritis, multiple endocrine neoplasia type 1, or it may be sporadic.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoid tumor","termid":"MONDO:0005369"},{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:83885","NCIT:C4635","EFO:1000275","UMLS:C0349529"],"synonyms":[{"name":"gastric ECL cell NET","type":"exact"},{"name":"gastric ECL cell NET G1","type":"exact"},{"name":"gastric ECL cell, histamine-producing NET","type":"exact"},{"name":"gastric ECL-cell carcinoid tumor","type":"exact"},{"name":"gastric ECL-cell carcinoid tumour","type":"exact"},{"name":"gastric NET G1","type":"exact"},{"name":"gastric carcinoid tumor","type":"exact"},{"name":"gastric carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell carcinoid tumour","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumor","type":"exact"},{"name":"gastric enterochromaffin-like cell neuroendocrine tumour","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of stomach","type":"exact"},{"name":"stomach NET G1","type":"exact"},{"name":"stomach carcinoid tumor","type":"exact"},{"name":"stomach carcinoid tumour","type":"exact"},{"name":"stomach neuroendocrine neoplasm G1","type":"exact"},{"name":"stomach neuroendocrine tumor, well differentiated, low grade","type":"exact"}],"termid":"MONDO:0006227","xrefs":{"Monarch":{"xref_id":"0006227"}}}


id: MONDO:0009589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dwarfism-cleft palate-camptodactyly syndrome is characterized by mesomelic shortening and bowing of the limbs, camptodactyly, skin dimpling and cleft palate with retrognathia and mandibular hypoplasia. It has been described in a brother and sister born to consanguineous parents. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesomelic dwarfism-cleft palate-camptodactyly syndrome","secondary_identifiers":["SCTID:715471007","UMLS:C1855273","MEDGEN:340833","GARD:3552","MESH:C565404","OMIM:249710"],"synonyms":[{"name":"Reardon-Hall-Slaney syndrome","type":"exact"},{"name":"mesomelic dwarfism cleft palate camptodactyly","type":"related"},{"name":"mesomelic dysplasia, Kozlowski-Reardon type","type":"exact"},{"name":"mesomelic dysplasia, Reardon type","type":"exact"},{"name":"mesomelic limb shortening and bowing","type":"related"}],"termid":"MONDO:0009589","xrefs":{"Monarch":{"xref_id":"0009589"}}}


id: MONDO:0014847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SYCE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 15","secondary_identifiers":["GARD:16173","MEDGEN:934746","UMLS:C4310779","DOID:0070172","OMIM:616950"],"synonyms":[{"name":"SPGF15","type":"exact"},{"name":"SYCE1 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in SYCE1","type":"exact"},{"name":"spermatogenic failure 15","type":"exact"},{"name":"spermatogenic failure 15; SPGF15","type":"exact"},{"name":"spermatogenic failure type 15","type":"exact"}],"termid":"MONDO:0014847","xrefs":{"Monarch":{"xref_id":"0014847"}}}


id: PBO:0053102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope pseudogene 1","termid":"PBO:0053102"}


id: FYPO:0004560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to BE49385A (a GPI synthesis inhibitor, also called YW3548). Cells stop growing (and may die) at a concentration of BE49385A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to BE49385A","synonyms":[{"name":"hypersensitive to BE49385A","type":"exact"},{"name":"sensitive to BE49385A during mitotic cell cycle","type":"related"},{"name":"sensitive to BE49385A during vegetative growth","type":"exact"},{"name":"sensitive to YW3548","type":"exact"}],"termid":"FYPO:0004560"}


id: FYPO:0001023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cisplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on cisplatin","synonyms":[{"name":"normal cell population growth in presence of cisplatin","type":"exact"},{"name":"normal cell population growth on cisplatin","type":"exact"},{"name":"normal cellular response to cisplatin","type":"related"},{"name":"normal growth on cis-DDP","type":"exact"},{"name":"normal vegetative cell population growth on cisplatin","type":"exact"}],"termid":"FYPO:0001023"}


id: FYPO:0005670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype with abnormal chromosome segregation that is observed when a cell is exposed to methyl methanesulfonate. In this type of cut phenotype, a cell undergoes septation despite abnormal chromosome segregation such that the nucleus forms a single mass through which the septum forms.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut with abnormal chromosome segregation during cellular response to methyl methanesulfonate (obsolete FYPO:0005670)","synonyms":[{"name":"cut with abnormal chromosome segregation during cellular response to MMS","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"cut with abnormal chromosome segregation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"cut with abnormal chromosome segregation during cellular response to methyl methanesulphonate","type":"exact"},{"name":"cut with abnormal chromosome segregation in response to methyl methanesulfonate","type":"exact"},{"name":"cut with abnormal mitotic chromosome segregation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"septation following abnormal chromosome segregation during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0005670"}


id: PBO:0072113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 2","termid":"PBO:0072113"}


id: MONDO:0800358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 17","secondary_identifiers":["MEDGEN:482154","UMLS:C3280524"],"synonyms":[{"name":"SCZD17","type":"exact"}],"termid":"MONDO:0800358","xrefs":{"Monarch":{"xref_id":"0800358"}}}


id: GO:2001155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glycolytic fermentation to ethanol","termid":"GO:2001154"},{"relation_name":"negatively_regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"negative regulation of glycolytic fermentation to ethanol","synonyms":[{"name":"negative regulation of ethanol fermentation","type":"exact"},{"name":"negative regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001155"}


id: PBO:0062291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 2 pseudogene","termid":"PBO:0062291"}


id: GO:0098827
data:
  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distinct region of the endoplasmic reticulum.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle subcompartment","termid":"GO:0031984"},{"relation_name":"part_of","term_name":"endoplasmic 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id: GO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(4-hydroxyphenyl)lactate + NAD+ = 3-(4-hydroxyphenyl)pyruvate + NADH.","definition_xrefs":["RHEA:10780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxyphenylpyruvate reductase activity","secondary_identifiers":["EC:1.1.1.237","MetaCyc:HYDROXYPHENYLPYRUVATE-REDUCTASE-RXN"],"synonyms":[{"name":"4-hydroxyphenyllactate:NAD+ oxidoreductase activity","type":"related"},{"name":"HPRP","type":"related"}],"termid":"GO:0047995"}


id: GO:0032421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A bundle of cross-linked stereocilia, arranged around a kinocilium on the apical surface of a sensory hair cell (e.g. a neuromast, auditory or vestibular hair cell). Stereocilium bundles act as mechanosensory organelles by responding to fluid motion or fluid pressure changes.","definition_xrefs":["PMID:15661519","GOC:ecd","PMID:7840137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cluster of actin-based cell projections","termid":"GO:0098862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium bundle","synonyms":[{"name":"stereocilia bundle","type":"exact"}],"termid":"GO:0032421"}


id: PBO:0030370
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0030370"}


id: PBO:0068452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 28, pseudogene","termid":"PBO:0068452"}


id: PBO:0091657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane hexose:proton symporter, unknown specificity Ght4","termid":"PBO:0091657"}


id: GO:0010960
data:
  {"annotated_genes":["SJAG_02578","SJAG_03516","SJAG_04111"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57576],"is_not":false,"summary":null,"term":"GO:0010960"},{"annotations":[70520,74796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of magnesium ions within an organism or cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"magnesium ion homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0010960","terms_by_termid":{"GO:0010960":null,"GO:0010961":null}}


id: PBO:0043021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1A","termid":"PBO:0043021"}


id: PBO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt2","termid":"PBO:0001149"}


id: PBO:0048993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 4","termid":"PBO:0048993"}


id: PBO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light chain","termid":"PBO:0060841"}


id: PBO:0049240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 8","termid":"PBO:0049240"}


id: PBO:0065607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 1","termid":"PBO:0065607"}


id: PBO:0066237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 44","termid":"PBO:0066237"}


id: FYPO:0002630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the outer surface of the fungal-type cell wall is rougher and less regular than normal.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology during vegetative growth","termid":"FYPO:0000351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"irregular cell wall during vegetative growth","synonyms":[{"name":"irregular cell wall during mitotic cell cycle","type":"related"},{"name":"irregular cell wall surface texture during vegetative growth","type":"exact"},{"name":"rough cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002630"}


id: SO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding RNA that is generated by backsplicing of exons or introns, resulting in a covalently closed loop without a 5’ cap or 3’ polyA tail.","definition_xrefs":["PMID:29182528","PMID:29626935","PMID:29086764","PMID:29230098","PMID:29576969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_ncRNA","synonyms":[{"name":"circRNA","type":"broad"},{"name":"circular ncRNA","type":"exact"},{"name":"noncoding circRNA","type":"exact"}],"termid":"SO:0002291"}


id: PBO:0065333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 57","termid":"PBO:0065333"}


id: PBO:0049461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 1","termid":"PBO:0049461"}


id: PBO:0066655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIO kinase 3","termid":"PBO:0066655"}


id: MONDO:0014476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 8","secondary_identifiers":["MEDGEN:863545","UMLS:C4015108","OMIM:616055","Orphanet:401953","DOID:0050996","GARD:17665"],"synonyms":[{"name":"EA8","type":"related"},{"name":"episodic ataxia type 8","type":"exact"},{"name":"episodic ataxia with slurred speech","type":"related"},{"name":"episodic ataxia, type 8","type":"related"}],"termid":"MONDO:0014476","xrefs":{"Monarch":{"xref_id":"0014476"}}}


id: GO:0021645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the vagus nerve. This process pertains to the physical shaping of a rudimentary structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"vagus nerve morphogenesis","termid":"GO:0021644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve structural organization","synonyms":[{"name":"CN X structural organization","type":"related"},{"name":"vagus nerve structural organisation","type":"exact"}],"termid":"GO:0021645"}


id: PBO:0079549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 2","termid":"PBO:0079549"}


id: PBO:0073623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 9","termid":"PBO:0073623"}


id: PR:O59742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.06c","synonyms":[{"name":"Spom972h-clu1","type":"exact"},{"name":"protein TIF31 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59742"}


id: GO:0016592
data:
  {"annotated_genes":["SJAG_04099","SJAG_02849","SJAG_02494","SJAG_04820","SJAG_04705","SJAG_00342","SJAG_03590","SJAG_00904","SJAG_03981","SJAG_01952","SJAG_00156","SJAG_02391","SJAG_00909","SJAG_03573","SJAG_01403","SJAG_04647","SJAG_03622","SJAG_05203","SJAG_00613","SJAG_00297","SJAG_01778","SJAG_05341"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57743,59024,59434,59746,59785,61911,64051,64199,64374,66953,67356,68455,70171,74560,74926,76304,77789,77981,78624,79458,79847,94784],"is_not":false,"summary":null,"term":"GO:0016592"}]},"cv_name":"cellular_component","definition":"A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The mediator complex is required for activation of transcription of most protein-coding genes, but can also act as a transcriptional corepressor. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:11454195","PMID:17870225","PMID:16168358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00613":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01778":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02849":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_03981":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mediator complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Mediator_(coactivator)","GO:0000119"],"synonyms":[{"name":"CDK8-containing TRAP/mediator complex","type":"related"},{"name":"L mediator complex","type":"exact"},{"name":"Srb-mediator complex","type":"exact"},{"name":"TRAP complex","type":"narrow"}],"termid":"GO:0016592","terms_by_termid":{"GO:0016592":null}}


id: MONDO:0004962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endometrial carcinoma is a carcinoma that arises from the endometrium (the lining of the uterus or womb). It is the result of the abnormal growth of cells that have the ability to invade or spread to other parts of the body. The first sign is most often vaginal bleeding not associated with a menstrual period. Other symptoms include pain with urination or sexual intercourse, or pelvic pain. Endometrial cancer occurs most commonly after menopause. In stage II the cancer has spread from the body of the uterus and is growing into the supporting connective tissue of the cervix (called the cervical stroma). The cancer has spread into connective tissue of the cervix, but has not spread outside the uterus.","definition_xrefs":["EFO:0000206"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete stage of disease (obsolete MONDO:0021007)","termid":"MONDO:0021007"},{"relation_name":"is_a","term_name":"endometrioid adenocarcinoma","termid":"MONDO:0005026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"stage II endometrioid carcinoma","termid":"MONDO:0004962","xrefs":{"Monarch":{"xref_id":"0004962"}}}


id: GO:0015822
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"ornithine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-ornithine transport","type":"narrow"}],"termid":"GO:0015822","terms_by_termid":{"GO:1990575":null}}


id: PBO:0013789
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPS1","termid":"PBO:0013789"}


id: MOD:01604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 4x(15)N labeled L-arginine.","definition_xrefs":["URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=600113|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(15)N labeled L-arginine","termid":"MOD:01604"}


id: PBO:0089225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38","termid":"PBO:0089225"}


id: GO:0004575
data:
  {"annotated_genes":["SJAG_04301"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77167],"is_not":false,"summary":null,"term":"GO:0004575"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + H2O = alpha-D-glucose + beta-D-fructose.","definition_xrefs":["RHEA:33795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-fructofuranosidase activity","termid":"GO:0004564"},{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"sucrose alpha-glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.2.1.48","KEGG_REACTION:R00802","Reactome:R-HSA-189069","Reactome:R-HSA-5659926","MetaCyc:3.2.1.48-RXN"],"synonyms":[{"name":"alpha-D-glucopyranosyl beta-D-fructofuranoside hydrolysis","type":"broad"},{"name":"beta-D-fructofuranosyl alpha-D-glucopyranoside hydrolysis","type":"broad"},{"name":"intestinal sucrase activity","type":"related"},{"name":"sucrase activity","type":"related"},{"name":"sucrase(invertase)","type":"related"},{"name":"sucrase-isomaltase activity","type":"related"},{"name":"sucrose alpha-D-glucohydrolase activity","type":"exact"},{"name":"sucrose alpha-glucohydrolase activity","type":"related"},{"name":"sucrose hydrolysis","type":"broad"},{"name":"sucrose-alpha-D-glucohydrolase activity","type":"related"}],"termid":"GO:0004575","terms_by_termid":{"GO:0004575":null}}


id: PR:Q10475
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SAFB-like transcription modulator that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.03","secondary_identifiers":["UniProtKB:Q10475"],"synonyms":[{"name":"Spom972h-SLTM","type":"exact"},{"name":"eIF-4-gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF-4G (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10475"}


id: GO:0016532
data:
  {"annotated_genes":["SJAG_04403"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93482],"is_not":false,"summary":null,"term":"GO:0016532"}]},"cv_name":"molecular_function","definition":"A copper chaperone activity that specifically delivers copper to the Cu-Zn superoxide dismutase, to activate superoxide dismutase activity.","definition_xrefs":["GOC:vw","PMID:9295278","PMID:15064408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper chaperone activity","termid":"GO:0016531"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"superoxide dismutase copper chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"superoxide dismutase copper carrier activity","type":"exact"}],"termid":"GO:0016532","terms_by_termid":{"GO:0016532":null}}


id: FYECO:0000403
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with L-glutamine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, glutamine nitrogen source","synonyms":[{"name":"EMMG","type":"related"},{"name":"glucose minimal medium, glutamine nitrogen source","type":"exact"},{"name":"standard glucose minimal medium, glutamine nitrogen source","type":"related"}],"termid":"FYECO:0000403"}


id: MONDO:0019906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 11 syndrome is an autosomal anomaly characterized by variable clinical features, including early growth retardation and short stature, microcephaly, developmental delay, some degree of intellectual disability, facial dysmorphism and café-au-lait spots. In some cases, congenital heart disease and endocrine abnormalities have been reported.","definition_xrefs":["Orphanet:96175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 11 disorder","termid":"MONDO:0700018"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 11","secondary_identifiers":["ICD9:758.89","SCTID:111310003","UMLS:C0265444","GARD:10846","MEDGEN:539256"],"synonyms":[{"name":"RC11","type":"exact"},{"name":"Ring 11","type":"related"},{"name":"Ring chromosome 11 syndrome","type":"related"},{"name":"Ring chromosome type 11","type":"exact"},{"name":"chromosome 11 ring","type":"related"},{"name":"r(11) syndrome","type":"exact"},{"name":"r11","type":"related"}],"termid":"MONDO:0019906","xrefs":{"Monarch":{"xref_id":"0019906"}}}


id: PBO:0084573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein of the plasma membrane and ER; interacts specifically in vivo with the phospholipid translocase (flippase) Dnf1p; involved in translocation of phospholipids and alkylphosphocholine drugs across the plasma membrane; null mutant requires tryptophan due to mislocalization of tryptophan permease Tat2p","termid":"PBO:0084573"}


id: PR:O74314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.09c","synonyms":[{"name":"O-succinylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC15D4.09c","type":"exact"}],"termid":"PR:O74314"}


id: MONDO:0006791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe, intractable vomiting during pregnancy (usually the first trimester) accompanied by dehydration, weight loss, and electrolyte imbalances.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperemesis gravidarum","secondary_identifiers":["MESH:D006939","HP:0012188","EFO:1000971","UMLS:C0020450","MedDRA:10020614","SCTID:14094001","MEDGEN:43776"],"synonyms":[{"name":"hyperemesis gravidarum","type":"exact"},{"name":"hyperemesis gravidarum (disease)","type":"exact"},{"name":"pernicious vomiting of pregnancy","type":"related"},{"name":"pregnancy pernicious vomiting","type":"related"}],"termid":"MONDO:0006791","xrefs":{"Monarch":{"xref_id":"0006791"}}}


id: PBO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 6","termid":"PBO:0005689"}


id: GO:0006460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-prolyl isomerase B reaction (obsolete GO:0006460)","synonyms":[{"name":"peptidyl-prolyl isomerase B reaction","type":"exact"}],"termid":"GO:0006460"}


id: PBO:0059079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoacylglycerol O-acyltransferase 2","termid":"PBO:0059079"}


id: FYPO:0000526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pexophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased peroxisome degradation","synonyms":[{"name":"decreased pexophagy","type":"exact"},{"name":"pexophagy: decreased","type":"related"},{"name":"reduced peroxisome degradation","type":"exact"}],"termid":"FYPO:0000526"}


id: MONDO:0008381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized pigmentary retinal degeneration with onset in the teens leading to blindness in the sixth ans seventh decades of life.","definition_xrefs":["DOID:0110420","PMID:3618160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"dominant pericentral pigmentary retinopathy","secondary_identifiers":["UMLS:C1867261","GARD:15111","ICD10CM:H35.5","MEDGEN:357237","MESH:C566713","OMIM:180210"],"synonyms":[{"name":"retinopathy, pericentral pigmentary, dominant","type":"related"}],"termid":"MONDO:0008381","xrefs":{"Monarch":{"xref_id":"0008381"}}}


id: PBO:0079601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E4 pseudogene","termid":"PBO:0079601"}


id: MOD:00769
data:
  {"annotated_genes":["SJAG_03524","SJAG_03632","SJAG_02980","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80978,81039,80988,81000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 71.0-71.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 71.0-71.1 Da","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:00769","terms_by_termid":{"MOD:01154":null}}


id: PBO:0030034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_leptomycin_B_binding","termid":"PBO:0030034"}


id: MONDO:0030533
data:
  {"annotated_genes":["SJAG_01826"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87440],"is_not":false,"summary":null,"term":"MONDO:0030533"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01826":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 73","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676902","DOID:0081233","OMIM:619717","MEDGEN:1802013"],"synonyms":[{"name":"MRT73","type":"exact"}],"termid":"MONDO:0030533","terms_by_termid":{"MONDO:0030533":null},"xrefs":{"Monarch":{"xref_id":"0030533"}}}


id: GO:0071564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that is found in neural stem or progenitor cells, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, PHF10/BAF45A, ACTL6A/BAF53A genes. The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells.","definition_xrefs":["GOC:mah","GOC:ss","PMID:17640523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"npBAF complex","termid":"GO:0071564"}


id: MONDO:0016039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"superficial Fibromatosis","termid":"MONDO:0016037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infantile digital fibromatosis","secondary_identifiers":["HP:0025197","ICD9:238.8","MEDGEN:232929","SCTID:399903008","GARD:8487","NCIT:C3456","UMLS:C1318562","Orphanet:199267"],"synonyms":[{"name":"IDF","type":"related"},{"name":"Reye tumor","type":"exact"},{"name":"Reye tumour","type":"exact"},{"name":"Reye's tumor","type":"exact"},{"name":"Reye's tumour","type":"exact"},{"name":"asymptomatic nodular proliferation of fibrous tissue on the dorsal and lateral aspects of the fingers or toes","type":"related"},{"name":"digital fibrous tumor of Reye","type":"exact"},{"name":"digital fibrous tumour of Reye","type":"exact"},{"name":"inclusion body fibromatosis","type":"exact"},{"name":"inclusion body fibromatosis (disease)","type":"exact"},{"name":"infantile digital fibroma/fibromatosis","type":"exact"},{"name":"infantile digital fibromatosis","type":"exact"},{"name":"recurring digital fibrous tumor of childhood","type":"exact"},{"name":"recurring digital fibrous tumour of childhood","type":"exact"}],"termid":"MONDO:0016039","xrefs":{"Monarch":{"xref_id":"0016039"}}}


id: FYPO:0000453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of DNA in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"DNA content decreased during vegetative growth","synonyms":[{"name":"DNA content decreased during mitotic cell cycle","type":"related"},{"name":"DNA content reduced during vegetative growth","type":"exact"},{"name":"decreased DNA content during vegetative growth","type":"exact"},{"name":"decreased DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0000453"}


id: MONDO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of spindle to ovoid cells which show phenotypic features similar to those of interdigitating dendritic cells. The clinical course is generally aggressive. (WHO, 2008)","definition_xrefs":["NCIT:C9282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"interdigitating dendritic cell sarcoma","secondary_identifiers":["MEDGEN:266040","DOID:7848","icd11.foundation:214592620","ICDO:9757/1","MESH:D054739","EFO:0007329","ONCOTREE:IDCS","UMLS:C1260326","NANDO:2200035","SCTID:715664005","icd11.foundation:2024362257","ICDO:9757/3"],"synonyms":[{"name":"interdigitating Dendritic cell sarcoma","type":"exact"},{"name":"interdigitating Dendritic cell sarcoma/tumor","type":"exact"},{"name":"interdigitating cell sarcoma","type":"broad"},{"name":"interdigitating cell sarcoma/tumor","type":"exact"}],"termid":"MONDO:0005813","xrefs":{"Monarch":{"xref_id":"0005813"}}}


id: MONDO:0015862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete embryonal carcinoma (obsolete MONDO:0015862)","termid":"MONDO:0015862","xrefs":{"Monarch":{"xref_id":"0015862"}}}


id: MONDO:0018900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticosteroid-sensitive aseptic abscesses syndrome is a well-defined entity within the group of autoinflammatory disorders.","definition_xrefs":["Orphanet:54251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"corticosteroid-sensitive aseptic abscess syndrome","secondary_identifiers":["UMLS:C4303863","GARD:10946","SCTID:720751000","MEDGEN:929532"],"synonyms":[{"name":"aseptic abscesses syndrome","type":"exact"},{"name":"aseptic systemic abscesses","type":"exact"},{"name":"corticosteroid-sensitive aseptic abscesses","type":"related"},{"name":"disseminated aseptic abscesses","type":"exact"}],"termid":"MONDO:0018900","xrefs":{"Monarch":{"xref_id":"0018900"}}}


id: MONDO:0800300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black locks with albinism and deafness syndrome","secondary_identifiers":["UMLS:C0268501","MEDGEN:82812"],"synonyms":[{"name":"BADS","type":"exact"}],"termid":"MONDO:0800300","xrefs":{"Monarch":{"xref_id":"0800300"}}}


id: PBO:0045390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 1","termid":"PBO:0045390"}


id: GO:0016480
data:
  {"annotated_genes":["SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74062],"is_not":false,"summary":null,"term":"GO:0016480"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase III.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase III","termid":"GO:0006359"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"downregulation of transcription from RNA polymerase III promoter","type":"exact"},{"name":"inhibition of transcription from RNA polymerase III promoter","type":"narrow"},{"name":"negative regulation of transcription from Pol III promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0016480","terms_by_termid":{"GO:0016480":null}}


id: MONDO:0020308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by childhood to mid-adolescence onset of frequent, brief, diurnal simple partial seizures which usually begin with visual hallucinations (e.g. phosphenes) and/or ictal blindness and may associate non visual seizures (such as deviation of the eyes, oculoclonic seizures), forced eyelid closure and blinking and sensory hallucinations. Post-ictal headache is common while impairment of consciousness is rare.","definition_xrefs":["Orphanet:98816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-limited childhood occipital epilepsy","termid":"MONDO:0007558"},{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood occipital visual epilepsy","secondary_identifiers":["MEDGEN:581521","GARD:19582","UMLS:C0393677"],"synonyms":[{"name":"COVE","type":"exact"},{"name":"benign childhood occipital epilepsy, Gastaut type","type":"exact"},{"name":"childhood occipital epilepsy (Gastaut type)","type":"exact"},{"name":"late-onset benign childhood occipital epilepsy","type":"exact"}],"termid":"MONDO:0020308","xrefs":{"Monarch":{"xref_id":"0020308"}}}


id: SO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"RNA_chromosome","termid":"SO:0000961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_RNA_chromosome","synonyms":[{"name":"double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000965"}


id: MONDO:0013838
data:
  {"annotated_genes":["SJAG_01865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86652],"is_not":false,"summary":null,"term":"MONDO:0013838"}]},"cv_name":"mondo","definition":"Any coenzyme Q10 deficiency in which the cause of the disease is a mutation in the PDSS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0004069"],"is_obsolete":false,"name":"coenzyme Q10 deficiency, primary, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070240","MEDGEN:766272","GARD:18379","UMLS:C3553358","OMIM:614652"],"synonyms":[{"name":"COQ10D3","type":"related"},{"name":"PDSS2 coenzyme Q10 deficiency","type":"exact"},{"name":"coenzyme Q10 deficiency caused by mutation in PDSS2","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 3","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, type 3","type":"exact"}],"termid":"MONDO:0013838","terms_by_termid":{"MONDO:0013838":null},"xrefs":{"Monarch":{"xref_id":"0013838"}}}


id: GO:0071950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the reduced form, FADH2, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin adenine dinucleotide binding","termid":"GO:0050660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FADH2 binding","synonyms":[{"name":"reduced flavin adenine dinucleotide binding","type":"exact"},{"name":"reduced flavine-adenine dinucleotide binding","type":"exact"}],"termid":"GO:0071950"}


id: FYPO:0000766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of N-ethylmaleimide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to N-ethylmaleimide","synonyms":[{"name":"resistance to N-ethylmaleimide during mitotic cell cycle","type":"related"},{"name":"resistance to N-ethylmaleimide during vegetative growth","type":"exact"},{"name":"resistant to N-ethylmaleimide","type":"exact"}],"termid":"FYPO:0000766"}


id: GO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stereocilia link that is formed by a fine filament running more or less vertically upward from the tip of each shorter stereocilium to attach at a higher point on its adjacent taller neighbor. Tilting the bundle puts tension on the filaments, which pull on mechanically gated ion channels in the membrane of the stereocilia.","definition_xrefs":["PMID:1108787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia coupling link","termid":"GO:0002139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia tip link","termid":"GO:0002140"}


id: PBO:0063284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 10","termid":"PBO:0063284"}


id: PBO:0055069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2485","termid":"PBO:0055069"}


id: PBO:0069320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 578, pseudogene","termid":"PBO:0069320"}


id: PBO:0077596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 7","termid":"PBO:0077596"}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: GO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the metanephric nephron acquire their identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in metanephric nephron development","termid":"GO:0072272"},{"relation_name":"part_of","term_name":"metanephric nephron tubule formation","termid":"GO:0072289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"}


id: PBO:0031397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytokinesis","termid":"PBO:0031397"}


id: GO:0120155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A trimeric complex involved in cytokinesis. Proposed to bridge actomyosin ring contraction and septum synthesis in yeast, resulting in the coordination of these processes, and leading to plasma membrane ingression and fusion. In the yeast Saccharomyces cerevisiae this complex consists of Mlc1p, Iqg1p and Hof1p proteins.","definition_xrefs":["PMID:24413167","PMID:24895401","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MIH complex","synonyms":[{"name":"Mlc1p-Iqg1p-Hof1p complex","type":"exact"}],"termid":"GO:0120155"}


id: PBO:0086000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to medium chain dehydrogenase/reductases; expression induced by stresses including osmotic shock, DNA damaging agents, and other chemicals; GFP-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0086000"}


id: PATO:0001220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001220 angle_unit (obsolete PATO:0001220)","termid":"PATO:0001220"}


id: PBO:0072660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 2","termid":"PBO:0072660"}


id: PBO:0071591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 8","termid":"PBO:0071591"}


id: PBO:0070553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 19","termid":"PBO:0070553"}


id: GO:0071276
data:
  {"annotated_genes":["SJAG_03497","SJAG_00044","SJAG_00988","SJAG_02599","SJAG_04516","SJAG_01351","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89223],"is_not":false,"summary":null,"term":"GO:0071276"},{"annotations":[97344,93651,71183,108746,97382,118502],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cadmium ion","termid":"GO:0046686"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03497":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cadmium ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to cadmium","type":"exact"}],"termid":"GO:0071276","terms_by_termid":{"GO:0071276":null,"GO:0098849":null}}


id: MONDO:0013688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Linear and whorled nevoid hypermelanosis (LWNH) is a rare skin condition characterized by swirling streaks of hyperpigmented (darkened) skin. The pigmentation follows the lines of Blashko and is mainly located on the trunk and limbs. It is present at birth or appears in the first few weeks of life. It typically progresses for one to two years and then stabilizes. Hyperpigmentation is usually the only symptom but there are isolated reports of other symptoms, involving mostly the central nervous system, musculoskeletal system, and heart. While most cases of LWNH are sporadic, apparent genetic transmission rarely has been described. A few people with LWNH have been diagnosed with chromosomal mosaicism.","direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"Becker nevus syndrome","termid":"MONDO:0011500"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"linear and whorled nevoid hypermelanosis","secondary_identifiers":["UMLS:C1304501","SCTID:403803002","OMIM:614323","MEDGEN:473394","GARD:11004","NCIT:C3924","Orphanet:79150"],"synonyms":[{"name":"Becker Nevus","type":"exact"},{"name":"Becker's Nevus","type":"exact"},{"name":"LWNH","type":"related"},{"name":"hyperpigmentation, progressive cribriform and zosteriform","type":"related"},{"name":"linear and whorled hypermelanosis","type":"related"},{"name":"linear papular ectodermal-mesodermal hamartoma","type":"exact"},{"name":"melanosis Neviformis","type":"exact"},{"name":"nevoid hypermelanosis, linear and whorled","type":"related"},{"name":"pigmented hairy Epidermal Nevus","type":"exact"},{"name":"pigmented hairy Nevus of Becker","type":"exact"},{"name":"progressive cribriform and zosteriform hyperpigmentation","type":"exact"},{"name":"reticulate hyperpigmentation of Iijima","type":"related"},{"name":"zebra-like hyperpigmentation","type":"related"},{"name":"zosteriform hyperpigmentation","type":"related"},{"name":"zosteriform lentiginous nevus","type":"related"}],"termid":"MONDO:0013688","xrefs":{"Monarch":{"xref_id":"0013688"}}}


id: PBO:0030953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation","termid":"PBO:0030953"}


id: MONDO:0021159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An salpingitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal salpingitis","secondary_identifiers":["SCTID:237038001","MEDGEN:574651","UMLS:C0341811"],"synonyms":[{"name":"Neisseria gonorrhoeae caused salpingitis","type":"exact"},{"name":"Neisseria gonorrhoeae salpingitis","type":"exact"}],"termid":"MONDO:0021159","xrefs":{"Monarch":{"xref_id":"0021159"}}}


id: PBO:0030707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_nitrogen_starvation","termid":"PBO:0030707"}


id: GO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:7744868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"very long-chain fatty acid metabolic process","termid":"GO:0000038"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"very long-chain fatty acid catabolic process","synonyms":[{"name":"very-long-chain fatty acid breakdown","type":"exact"},{"name":"very-long-chain fatty acid catabolic process","type":"exact"},{"name":"very-long-chain fatty acid catabolism","type":"exact"},{"name":"very-long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042760"}


id: GO:0019834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of phospholipase A2.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase inhibitor activity","termid":"GO:0004859"},{"relation_name":"negatively_regulates","term_name":"phospholipase A2 activity","termid":"GO:0004623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016788"},{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0030234","GO:0004857","GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phospholipase A2 inhibitor activity","termid":"GO:0019834"}


id: PBO:0113096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine phosphate lyase; regulates intracellular levels of sphingolipid long-chain base phosphates (LCBPs), degrades phosphorylated long chain bases, prefers C16 dihydrosphingosine-l-phosphate as a substrate; localizes to the ER and to the peroxisome","termid":"PBO:0113096"}


id: GO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized from the pulmonary artery endothelium. An pulmonary artery endothelium is an epithelium that lines the pulmonary artery.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"},{"relation_name":"part_of","term_name":"pulmonary artery morphogenesis","termid":"GO:0061156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary artery endothelial tube morphogenesis","termid":"GO:0061155"}


id: GO:0010780
data:
  {"annotated_genes":["SJAG_00100","SJAG_05333","SJAG_00908","SJAG_04303","SJAG_03048","SJAG_02652","SJAG_03720","SJAG_00172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90676,105198,109061,109957,111437],"is_not":false,"summary":null,"term":"GO:0010780"},{"annotations":[102694,108672],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905263"},{"annotations":[116534],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062209"}]},"cv_name":"biological_process","definition":"The cell cycle process in which double-strand breaks are generated at defined hotspots throughout the genome during meiosis I resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00172":null,"SJAG_00908":null,"SJAG_02652":null,"SJAG_03048":null,"SJAG_03720":null,"SJAG_04303":null,"SJAG_05333":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0140013","GO:0006310","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010780","terms_by_termid":{"GO:0010780":null,"GO:0062209":null,"GO:1905263":null}}


id: GO:0035656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to melanosomes.","definition_xrefs":["PMID:19841138"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated melanosomal adaptor activity (obsolete GO:0035656)","synonyms":[{"name":"kinesin-melanosome adaptor activity","type":"exact"}],"termid":"GO:0035656"}


id: PBO:0041830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASC3 exon junction complex subunit","termid":"PBO:0041830"}


id: PBO:0065722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWP1 homolog, endonuclein","termid":"PBO:0065722"}


id: PBO:0029624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0029624"}


id: MONDO:0014441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the MKS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 13","secondary_identifiers":["GARD:16037","MESH:C567140","OMIM:615990","UMLS:C2673873","MEDGEN:393032","DOID:0110135"],"synonyms":[{"name":"BBS13","type":"exact"},{"name":"Bardet-Biedl syndrome 13","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in MKS1","type":"exact"},{"name":"Bardet-Biedl syndrome type 13","type":"exact"},{"name":"MKS1 Bardet-Biedl syndrome","type":"exact"}],"termid":"MONDO:0014441","xrefs":{"Monarch":{"xref_id":"0014441"}}}


id: FYPO:0006250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA aminoacylation, the formation of an ester bond between a tRNA molecule and an amino acid specified by the tRNA anticodon, is abnormal. All tRNAs aminoacylation may be abnormal, or the aminoacylation of one or more specific tRNAs may be affected.","definition_xrefs":["GO:0006418","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abnormal tRNA aminoacylation","synonyms":[{"name":"abnormal tRNA aminoacylation during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA aminoacylation during vegetative growth","type":"exact"},{"name":"abnormal tRNA aminoacylation for protein translation","type":"exact"},{"name":"abnormal tRNA charging","type":"narrow"}],"termid":"FYPO:0006250"}


id: PBO:0080329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 93 pseudogene","termid":"PBO:0080329"}


id: PBO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.48","termid":"PBO:0000388"}


id: PBO:0044195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin D","termid":"PBO:0044195"}


id: SO:0001189
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of LNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"LNA","termid":"SO:0001188"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Locked_nucleic_acid"],"synonyms":[{"name":"LNA oligo","type":"exact"},{"name":"locked nucleic acid","type":"exact"}],"termid":"SO:0001189"}


id: PBO:0061887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid binding protein/cell adhesion molecule like","termid":"PBO:0061887"}


id: FYPO:0008224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which trimethylation of lysine at position 20 of histone H4 is decreased.","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H4-K20 trimethylation during vegetative growth","termid":"FYPO:0004224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H4-K20 trimethylation during mitotic G2/M phase","termid":"FYPO:0008224"}


id: GO:0070920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulatory non-coding RNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of regulatory ncRNA processing","synonyms":[{"name":"regulation of gene silencing by RNA, production of guide RNA","type":"exact"},{"name":"regulation of gene silencing by RNA, production of small RNA","type":"exact"},{"name":"regulation of production of small RNA involved in gene silencing by RNA","type":"narrow"}],"termid":"GO:0070920"}


id: GO:1990271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with anti-Mullerian hormone to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","PMID:23624077"],"gene_count":0,"genotype_count":0,"name":"obsolete anti-Mullerian hormone (obsolete GO:1990271)","synonyms":[{"name":"anti-Mullerian hormone","type":"exact"}],"termid":"GO:1990271"}


id: MONDO:0022820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital articular rigidity","secondary_identifiers":["MEDGEN:108568","UMLS:C0595987"],"termid":"MONDO:0022820","xrefs":{"Monarch":{"xref_id":"0022820"}}}


id: MONDO:0018175
data:
  {"annotated_genes":["SJAG_02839"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009206"}]},"cv_name":"mondo","definition":"Combined deficiency of factor V and factor VIII is an inherited bleeding disorder due to the reduction in activity and antigen levels of both factor V (FV) and factor VIII (FVIII) and characterized by mild-to-moderate bleeding symptoms.","definition_xrefs":["Orphanet:35909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02839":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"combined deficiency of factor V and factor VIII","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200686","UMLS:C1856883","icd11.foundation:184219764","SCTID:715559004","MEDGEN:384006","GARD:16639"],"synonyms":[{"name":"F5F8D","type":"exact"},{"name":"FV and FVIII combined deficiency","type":"exact"},{"name":"combined deficiency of factor V and factor type VIII","type":"exact"},{"name":"familial multiple coagulation factor deficiency","type":"exact"}],"termid":"MONDO:0018175","terms_by_termid":{"MONDO:0009206":null},"xrefs":{"Monarch":{"xref_id":"0018175"}}}


id: PATO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration quality inhering in a bearer by virtue of the bearer's catalytic activity divided by the volume of the system.","definition_xrefs":["IUPAC:IUPAC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concentration of","termid":"PATO:0000033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic (activity) concentration","termid":"PATO:0001674"}


id: MONDO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amelogenesis imperfecta (AI) represents a group of developmental conditions affecting the structure and clinical appearance of the enamel of all or nearly all the teeth in a more or less equal manner, and which may be associated with morphologic or biochemical changes elsewhere in the body.","definition_xrefs":["Orphanet:88661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dental enamel hypoplasia","termid":"MONDO:0004038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta","secondary_identifiers":["icd11.foundation:1923123066","DOID:2187","ICD9:520.5","CSP:0828-0533","MESH:D000567","NORD:765","SCTID:78494001","GARD:5791","OMIMPS:104500","MEDGEN:240","UMLS:C0002452"],"termid":"MONDO:0019507","xrefs":{"Monarch":{"xref_id":"0019507"}}}


id: PR:O13633
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily B member 12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02851","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C17A3.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.05c","secondary_identifiers":["UniProtKB:O13633"],"synonyms":[{"name":"Spom972h-DNAJB12","type":"exact"}],"termid":"PR:O13633"}


id: GO:0043362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a nucleate erythrocyte to attain its fully functional state. A nucleate erythrocyte is an erythrocyte with a nucleus.","definition_xrefs":["GOC:devbiol","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte maturation","termid":"GO:0043249"},{"relation_name":"part_of","term_name":"nucleate erythrocyte development","termid":"GO:0048823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleate erythrocyte maturation","synonyms":[{"name":"nucleate RBC maturation","type":"exact"},{"name":"nucleate red blood cell maturation","type":"exact"}],"termid":"GO:0043362"}


id: MONDO:0030294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megacystis-microcolon-intestinal hypoperistalsis syndrome","termid":"MONDO:0025986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 3","secondary_identifiers":["UMLS:C5543513","MEDGEN:1780019","OMIM:619362"],"synonyms":[{"name":"MMIHS3","type":"exact"},{"name":"megacystis-microcolon-intestinal hypoperistalsis syndrome 3","type":"exact"}],"termid":"MONDO:0030294","xrefs":{"Monarch":{"xref_id":"0030294"}}}


id: GO:0034617
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a tetrahydrobiopterin, 5,6,7,8-tetrahydrobiopterin or a derivative thereof; tetrahydrobiopterins are enzyme cofactors that carry electrons in redox reactions.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tetrahydrobiopterin binding","secondary_identifiers":["Reactome:R-HSA-1497784"],"synonyms":[{"name":"BH4 binding","type":"exact"},{"name":"H4biopterin binding","type":"exact"},{"name":"sapropterin binding","type":"exact"}],"termid":"GO:0034617"}


id: PBO:0074754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 113","termid":"PBO:0074754"}


id: MONDO:0013545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the ABCC9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 12","secondary_identifiers":["UMLS:C3279695","GARD:15748","OMIM:614050","MEDGEN:481325"],"synonyms":[{"name":"ABCC9 familial atrial fibrillation","type":"exact"},{"name":"ATFB12","type":"related"},{"name":"atrial fibrillation, familial, 12","type":"exact"},{"name":"atrial fibrillation, familial, type 12","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in ABCC9","type":"exact"}],"termid":"MONDO:0013545","xrefs":{"Monarch":{"xref_id":"0013545"}}}


id: GO:0021987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the cerebral cortex over time from its initial formation until its mature state. The cerebral cortex is the outer layered region of the telencephalon.","definition_xrefs":["GOC:dph","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pallium development","termid":"GO:0021543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex development","synonyms":[{"name":"corticogenesis","type":"narrow"},{"name":"neocortex development","type":"related"}],"termid":"GO:0021987"}


id: PBO:0043386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citramalyl-CoA lyase","termid":"PBO:0043386"}


id: PBO:0051046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-20","termid":"PBO:0051046"}


id: PBO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 8","termid":"PBO:0071169"}


id: PBO:0071792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p38","termid":"PBO:0071792"}


id: MONDO:0100163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A inflammatory syndrome in children infected by the SARS-CoV-2 with similarities to Kawasaki disease. Clinical manifestations range from fever and inflammation to myocardial injury, shock, and development of coronary artery aneurysms.","definition_xrefs":["PMID:32529358","PMID:32511692","PMID:32630212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"multisystem inflammatory syndrome in children and adults","termid":"MONDO:0035375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COVID-19–associated multisystem inflammatory syndrome in children","secondary_identifiers":["DOID:0080711","NCIT:C172127"],"synonyms":[{"name":"COVID-19 -related paediatric inflammatory multisystem syndrome","type":"exact"},{"name":"COVID-19 -related pediatric inflammatory multisystem syndrome","type":"exact"},{"name":"COVID-19 Kawasaki-like syndrome","type":"exact"},{"name":"COVID-19 associated multisystem inflammatory syndrome in children","type":"exact"},{"name":"MIS-C","type":"exact"},{"name":"PIMS","type":"exact"},{"name":"PIMS-TS","type":"exact"},{"name":"PMIS","type":"exact"},{"name":"SARS-CoV-2 Kawasaki-like syndrome","type":"exact"},{"name":"multisystem inflammatory syndrome in children","type":"exact"},{"name":"multisystem inflammatory syndrome in children associated with COVID-19","type":"exact"},{"name":"multisystem inflammatory syndrome in children associated with coronavirus disease 2019","type":"exact"},{"name":"paediatric inflammatory multisystem syndrome","type":"exact"},{"name":"paediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2","type":"exact"},{"name":"paediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2","type":"exact"},{"name":"paediatric multi-system inflammatory syndrome potentially associated with COVID-19","type":"exact"},{"name":"paediatric multisystem inflammatory syndrome","type":"exact"},{"name":"pediatric inflammatory multisystem syndrome","type":"exact"},{"name":"pediatric inflammatory multisystem syndrome temporally associated with SARS-CoV-2","type":"exact"},{"name":"pediatric inflammatory multisystem syndrome: temporally associated with SARS-CoV-2","type":"exact"},{"name":"pediatric multi-system inflammatory syndrome potentially associated with COVID-19","type":"exact"},{"name":"pediatric multisystem inflammatory syndrome","type":"exact"}],"termid":"MONDO:0100163","xrefs":{"Monarch":{"xref_id":"0100163"}}}


id: SO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a translocation, which is then a region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocaton_attribute","synonyms":[{"name":"translocation attribute","type":"exact"}],"termid":"SO:0001520"}


id: GO:0062095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an endoplasmic reticulum membrane to a peroxisome via molecular tethers that physically bridge the two membranes and attach them to each other.","definition_xrefs":["PMID:28463579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome localization","termid":"GO:0060151"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum-peroxisome tethering","termid":"GO:0062095"}


id: PBO:0052154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 3","termid":"PBO:0052154"}


id: GO:0006288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The ligation by DNA ligase of DNA strands. Ligation occurs after polymerase action to fill the gap left by the action of endonucleases during base-excision repair.","definition_xrefs":["ISBN:1550091131"],"gene_count":0,"genotype_count":0,"name":"obsolete base-excision repair, DNA ligation (obsolete GO:0006288)","termid":"GO:0006288"}


id: GO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles, 50-150 nm in diameter, that are formed when some eukaryotic host cells are homogenized and that sediment on centrifugation at 100000 g.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete host cell microsome (obsolete GO:0044189)","synonyms":[{"name":"host cell microsomal membrane","type":"exact"},{"name":"host cell microsome","type":"exact"}],"termid":"GO:0044189"}


id: PBO:0040131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 16","termid":"PBO:0040131"}


id: PBO:0067527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 671, pseudogene","termid":"PBO:0067527"}


id: GO:1901859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitochondrial DNA metabolic process.","definition_xrefs":["GOC:yaf","PMID:23150719","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of mitochondrial DNA metabolic process","termid":"GO:1901858"},{"relation_name":"negatively_regulates","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitochondrial DNA metabolic process","synonyms":[{"name":"down regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down regulation of mtDNA metabolic process","type":"exact"},{"name":"down regulation of mtDNA metabolism","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"down-regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"down-regulation of mtDNA metabolic process","type":"exact"},{"name":"down-regulation of mtDNA metabolism","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolic process","type":"exact"},{"name":"downregulation of mitochondrial DNA metabolism","type":"exact"},{"name":"downregulation of mtDNA metabolic process","type":"exact"},{"name":"downregulation of mtDNA metabolism","type":"exact"},{"name":"inhibition of mitochondrial DNA metabolic process","type":"narrow"},{"name":"inhibition of mitochondrial DNA metabolism","type":"exact"},{"name":"inhibition of mtDNA metabolic process","type":"exact"},{"name":"inhibition of mtDNA metabolism","type":"exact"},{"name":"negative regulation of mitochondrial DNA metabolism","type":"exact"},{"name":"negative regulation of mtDNA metabolic process","type":"exact"},{"name":"negative regulation of mtDNA metabolism","type":"exact"}],"termid":"GO:1901859"}


id: PBO:0080398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS28 subunit of ESCRT-I","termid":"PBO:0080398"}


id: MONDO:0009559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibulofacial dysostosis with mental deficiency","secondary_identifiers":["UMLS:C4692584","MEDGEN:1632207","MESH:C565420","OMIM:248400"],"synonyms":[{"name":"mandibulofacial dysostosis with intellectual disability","type":"related"},{"name":"mandibulofacial dysostosis with mental deficiency","type":"exact"},{"name":"mandibulofacial dysostosis with mental retardation","type":"related"}],"termid":"MONDO:0009559","xrefs":{"Monarch":{"xref_id":"0009559"}}}


