# terms

id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: PBO:0013826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein Atg16","termid":"PBO:0013826"}


id: PBO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 9","termid":"PBO:0060062"}


id: PBO:0084403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine permease; one of three amino acid permeases (Alp1p, Can1p, Lyp1p) responsible for uptake of cationic amino acids","termid":"PBO:0084403"}


id: MONDO:0016257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosarcoma of the corpus uteri (obsolete MONDO:0016257)","termid":"MONDO:0016257","xrefs":{"Monarch":{"xref_id":"0016257"}}}


id: PBO:0056467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase family member 4","termid":"PBO:0056467"}


id: GO:0005947
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Mitochondrial complex that possesses alpha-ketoglutarate dehydrogenase activity.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial alpha-ketoglutarate dehydrogenase complex (obsolete GO:0005947)","synonyms":[{"name":"2-oxoglutarate dehydrogenase complex","type":"broad"}],"termid":"GO:0005947"}


id: PBO:0052573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KMT5A pseudogene 1","termid":"PBO:0052573"}


id: PBO:0051319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR10-1 (pseudogene)","termid":"PBO:0051319"}


id: GO:0062231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of larval somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of somatic muscle development","termid":"GO:0062224"},{"relation_name":"is_a","term_name":"regulation of larval somatic muscle development","termid":"GO:0062229"},{"relation_name":"positively_regulates","term_name":"larval somatic muscle development","termid":"GO:0007526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of larval somatic muscle development","termid":"GO:0062231"}


id: SO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that contains a CDS but has no stop codon before the polyA site is reached.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSD_transcript","synonyms":[{"name":"non_stop_decay_transcript","type":"exact"}],"termid":"SO:0002130"}


id: MONDO:1012899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrallantois that occurs in cattle due to a mutation in the SLC12A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"hydrallantois, cattle","termid":"MONDO:1012503"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, SLC12A1-related, cattle","secondary_identifiers":["OMIA:002444-9913"],"termid":"MONDO:1012899","xrefs":{"Monarch":{"xref_id":"1012899"}}}


id: GO:0080050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed development.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed development","termid":"GO:0080050"}


id: GO:0140757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An thiol-dependent isopeptidase activity that cleaves NEDD8 from a target protein to which it is conjugated.","definition_xrefs":["PMID:25628956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"deNEDDylase activity","termid":"GO:0019784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"cysteine-type deNEDDylase activity","termid":"GO:0140757"}


id: PBO:0074367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 4 pseudogene 1","termid":"PBO:0074367"}


id: GO:0060249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within a defined anatomical structure of an organism, including control of cellular proliferation and death and control of metabolic function. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure homeostasis","synonyms":[{"name":"anatomical structure maintenance","type":"exact"}],"termid":"GO:0060249"}


id: GO:0080102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylthiopropyl-glucosinolate = 3-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methylthiopropyl glucosinolate S-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-2221"],"termid":"GO:0080102"}


id: PBO:0083676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein involved in turnover of plasma membrane proteins; member of the DUP380 subfamily of conserved, often subtelomeric COS genes; required for the multivesicular vesicle body sorting pathway that internalizes plasma membrane proteins for degradation; Cos proteins provide ubiquitin in trans for nonubiquitinated cargo proteins","termid":"PBO:0083676"}


id: PBO:0041689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 2","termid":"PBO:0041689"}


id: GO:0008531
data:
  {"annotated_genes":["SJAG_04845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73043],"is_not":false,"summary":null,"term":"GO:0008531"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + riboflavin = ADP + FMN + 2 H+.","definition_xrefs":["RHEA:14357","EC:2.7.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"riboflavin kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00549","Reactome:R-HSA-196964","MetaCyc:RIBOFLAVINKIN-RXN"],"synonyms":[{"name":"ATP:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"FK","type":"related"},{"name":"flavokinase activity","type":"related"},{"name":"riboflavin kinase (phosphorylating)","type":"related"},{"name":"riboflavine kinase activity","type":"related"}],"termid":"GO:0008531","terms_by_termid":{"GO:0008531":null}}


id: GO:0008509
data:
  {"annotated_genes":["SJAG_01168","SJAG_01973","SJAG_03401","SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[79450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[73815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[72013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a negatively charged ion from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion transmembrane transporter activity","termid":"GO:0015075"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_01168":null,"SJAG_01973":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"monoatomic anion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-166214"],"synonyms":[{"name":"anion transmembrane transporter activity","type":"broad"},{"name":"anion transporter activity","type":"exact"}],"termid":"GO:0008509","terms_by_termid":{"GO:0005254":null,"GO:0008308":null,"GO:0015379":null,"GO:1903425":null}}


id: GO:0015039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oxidized adrenodoxin + NADPH + H+ = reduced adrenodoxin + NADP+.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH-adrenodoxin reductase activity (obsolete GO:0015039)","synonyms":[{"name":"NADPH:adrenodoxin oxidoreductase activity","type":"related"},{"name":"adrenodoxin reductase activity","type":"broad"},{"name":"adrenodoxin-type ferredoxin reductase activity","type":"exact"}],"termid":"GO:0015039"}


id: PR:O74832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet127 gene.","definition_xrefs":["UniProtKB:O74832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA degradation protein pet127, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.04c","synonyms":[{"name":"Spom972h-pet127","type":"exact"}],"termid":"PR:O74832"}


id: FYPO:0006856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 37 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K37 methylation","termid":"FYPO:0006855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K37 methylation","synonyms":[{"name":"increased histone H3 K37 methylation","type":"exact"},{"name":"increased histone H3K37me","type":"exact"},{"name":"increased histone lysine H3 K37 methylation","type":"exact"}],"termid":"FYPO:0006856"}


id: GO:0097068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to thyroid hormone","termid":"GO:0097066"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyroxine","synonyms":[{"name":"response to T4","type":"exact"},{"name":"response to T4 stimulus","type":"exact"},{"name":"response to thyroxine stimulus","type":"exact"}],"termid":"GO:0097068"}


id: PR:Q9Y7L9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC685.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C685.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.08","synonyms":[{"name":"Spom972h-SPBC685.08","type":"exact"}],"termid":"PR:Q9Y7L9"}


id: PBO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma N","termid":"PBO:0043963"}


id: GO:0030906
data:
  {"annotated_genes":["SJAG_01039"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69462],"is_not":false,"summary":null,"term":"GO:0030906"}]},"cv_name":"cellular_component","definition":"The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.","definition_xrefs":["GOC:bf","PMID:26220253","PMID:9700157","PMID:11102511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"retromer complex","termid":"GO:0030904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"retromer, cargo-selective complex","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"cargo-selective retromer subcomplex","type":"exact"},{"name":"retromer CSC","type":"exact"},{"name":"retromer complex, inner shell","type":"exact"},{"name":"retromer, CRC","type":"exact"},{"name":"retromer, cargo recognition complex","type":"exact"}],"termid":"GO:0030906","terms_by_termid":{"GO:0030906":null}}


id: GO:0008869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactonate = 2-dehydro-3-deoxy-D-galactonate + H2O.","definition_xrefs":["EC:4.2.1.6","RHEA:18649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"galactonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R03033","MetaCyc:GALACTONDEHYDRAT-RXN"],"synonyms":[{"name":"D-galactonate dehydrase activity","type":"related"},{"name":"D-galactonate dehydratase activity","type":"related"},{"name":"D-galactonate hydro-lyase (2-dehydro-3-deoxy-D-galactonate-forming)","type":"related"},{"name":"D-galactonate hydro-lyase activity","type":"related"}],"termid":"GO:0008869"}


id: PBO:0064228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCG1 antisense RNA 1","termid":"PBO:0064228"}


id: MONDO:0100235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anterior segment dysgenesis in which the cause of the disease is a mutation in the FOXC1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"FOXC1-related anterior segment dysgenesis","termid":"MONDO:0100235","xrefs":{"Monarch":{"xref_id":"0100235"}}}


id: PBO:0061076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTPase KAP family P-loop domain containing 1","termid":"PBO:0061076"}


id: PBO:0040384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting accessory protein 2","termid":"PBO:0040384"}


id: GO:0006597
data:
  {"annotated_genes":["SJAG_03632","SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78159,103071],"is_not":false,"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine biosynthetic process","termid":"GO:0006596"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03632":null,"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spermine anabolism","type":"exact"},{"name":"spermine biosynthesis","type":"exact"},{"name":"spermine formation","type":"exact"},{"name":"spermine synthesis","type":"exact"}],"termid":"GO:0006597","terms_by_termid":{"GO:0006597":null}}


id: PBO:0004690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal export complex protein Arx1, peptidase family (predicted)","termid":"PBO:0004690"}


id: GO:0034060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a cyanelle.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cyanelle stroma","termid":"GO:0034060"}


id: PBO:0045766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECI1 antisense RNA 1","termid":"PBO:0045766"}


id: PBO:0063055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) specific ribonuclease subunit PAN2","termid":"PBO:0063055"}


id: PBO:0064263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing B2","termid":"PBO:0064263"}


id: PBO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 111","termid":"PBO:0071109"}


id: MONDO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the labia minora.","definition_xrefs":["NCIT:C9364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"labia minora cancer","termid":"MONDO:0001526"},{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"labia minora carcinoma","secondary_identifiers":["MEDGEN:233605","UMLS:C1334357","DOID:1293"],"synonyms":[{"name":"carcinoma of labia minora","type":"exact"},{"name":"carcinoma of labium minora","type":"exact"},{"name":"carcinoma of the labia minora","type":"exact"},{"name":"labia minora cancer","type":"broad"},{"name":"labia minora carcinoma","type":"exact"},{"name":"labium minora carcinoma","type":"exact"}],"termid":"MONDO:0001602","xrefs":{"Monarch":{"xref_id":"0001602"}}}


id: GO:0034333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:bc","GOC:mah","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"adherens junction assembly","synonyms":[{"name":"adherens junction formation","type":"exact"}],"termid":"GO:0034333"}


id: PBO:0085519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S21, no bacterial homolog; RPS21A has a paralog, RPS21B, that arose from the whole genome duplication","termid":"PBO:0085519"}


id: GO:0002718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cytokine production that contributes to an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"regulates","term_name":"cytokine production involved in immune response","termid":"GO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytokine production involved in immune response","secondary_identifiers":["GO:0002742","GO:0002739"],"synonyms":[{"name":"regulation of cytokine biosynthetic process involved in immune response","type":"narrow"},{"name":"regulation of cytokine production during immune response","type":"related"},{"name":"regulation of cytokine secretion involved in immune response","type":"narrow"}],"termid":"GO:0002718"}


id: PBO:0108987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 11","termid":"PBO:0108987"}


id: GO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules, such as those of the CD1 or HLA-E gene families.","definition_xrefs":["PMID:15928680","GOC:add","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: PBO:0080504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAPL cohesin release factor","termid":"PBO:0080504"}


id: GO:0097363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + [protein]-L-serine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine, or UDP-N-acetyl-D-glucosamine + [protein]-L-threonine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine.","definition_xrefs":["GOC:jsg","PMID:22158438","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"protein O-acetylglucosaminyltransferase activity","secondary_identifiers":["EC:2.4.1.255","Reactome:R-HSA-9687828"],"synonyms":[{"name":"O-GlcNAc transferase","type":"exact"},{"name":"O-linked N-acetylglucosaminyltransferase","type":"exact"},{"name":"OGTase","type":"exact"},{"name":"UDP-N-acetyl-D-glucosamine:protein-O-beta-N-acetyl-D-glucosaminyl transferase","type":"exact"},{"name":"protein O-GlcNAc transferase activity","type":"exact"}],"termid":"GO:0097363"}


id: MOD:00031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-selenocysteine, a natural pretranslational modification.","definition_xrefs":["PubMed:6076213","PubMed:2963330","PubMed:1066676","PubMed:4734725","ChEBI:30000","PubMed:2037562","PubMed:6714945","RESID:AA0022","PubMed:10523135","PubMed:6217842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteine residue","synonyms":[{"name":"(2R)-2-amino-3-selanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-selanylpropanoic acid","type":"exact"},{"name":"3-selenylalanine","type":"exact"},{"name":"L-selenocysteine","type":"exact"},{"name":"NON_STD Selenocysteine","type":"exact"},{"name":"SeCys","type":"exact"},{"name":"Sec","type":"exact"},{"name":"selenium cysteine","type":"exact"}],"termid":"MOD:00031"}


id: GO:0019368
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77953,92282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"}]},"cv_name":"biological_process","definition":"Elongation of a fatty acid chain into which one or more C-C double bonds have been introduced.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation","termid":"GO:0030497"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"fatty acid elongation, unsaturated fatty acid","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY0-862"],"termid":"GO:0019368","terms_by_termid":{"GO:0034625":null}}


id: GO:0048268
data:
  {"annotated_genes":["SJAG_00152","SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61647,78104],"is_not":false,"summary":null,"term":"GO:0048268"}]},"cv_name":"biological_process","definition":"The process that results in the assembly of clathrin triskelia into the ordered structure known as a clathrin cage.","definition_xrefs":["PMID:11460887","PMID:11977118","PMID:9531549","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_01748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"clathrin coat assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"clathrin cage assembly","type":"exact"}],"termid":"GO:0048268","terms_by_termid":{"GO:0048268":null}}


id: MONDO:0017882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omsk hemorrhagic fever (OHF), caused by Omsk hemorrhagic fever virus (OHFV), is a zoonotic disease characterized by fever, nausea, myalgia and moderately severe hemorrhagic manifestations as well as in some cases meningitis, pneumonia and nephrosis.","definition_xrefs":["Orphanet:319266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Omsk hemorrhagic fever","secondary_identifiers":["UMLS:C0019103","MEDGEN:9212","ICD10CM:A98.1","MESH:D006481","DOID:992","GARD:8254","ICD9:065.1","MedDRA:10030310","icd11.foundation:946068954","SCTID:48113006"],"termid":"MONDO:0017882","xrefs":{"Monarch":{"xref_id":"0017882"}}}


id: PBO:0061638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 2, pseudogene","termid":"PBO:0061638"}


id: GO:1900943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900940"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900943"}


id: GO:1902755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sulfurated eukaryotic molybdenum cofactor(2-).","definition_xrefs":["GOC:dph","GOC:TermGenie","GO_REF:0000068","PMID:18258600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolic process","synonyms":[{"name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolism","type":"exact"}],"termid":"GO:1902755"}


id: MONDO:0005962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis of the bones or joints.","definition_xrefs":["MESH:D014394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal tuberculosis","secondary_identifiers":["MEDGEN:21727","EFO:0007487","ICD9:015.9","DOID:1639","SCTID:17653001","ICD9:015","UMLS:C0041324"],"synonyms":[{"name":"osteoarticular tuberculosis","type":"exact"}],"termid":"MONDO:0005962","xrefs":{"Monarch":{"xref_id":"0005962"}}}


id: PBO:0038446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAR2 splicing factor","termid":"PBO:0038446"}


id: FYPO:0005607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B is abnormal. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone ubiquitination during vegetative growth","termid":"FYPO:0002921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone H2B-K119 ubiquitination during vegetative growth","synonyms":[{"name":"abnormal histone H2B conserved C-terminal lysine ubiquitination","type":"exact"},{"name":"abnormal histone H2B-K119 ubiquitination during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005607"}


id: FYPO:0001688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on brefeldin A","synonyms":[{"name":"normal cell population growth in presence of brefeldin A","type":"exact"},{"name":"normal cell population growth on BFA","type":"exact"},{"name":"normal cell population growth on brefeldin A","type":"exact"},{"name":"normal cellular response to brefeldin A","type":"related"},{"name":"normal vegetative cell population growth on brefeldin A","type":"exact"}],"termid":"FYPO:0001688"}


id: GO:0043161
data:
  {"annotated_genes":["SJAG_03351","SJAG_01528","SJAG_01210","SJAG_04357","SJAG_01760","SJAG_04655","SJAG_01497","SJAG_01022","SJAG_00192","SJAG_05316","SJAG_00778","SJAG_03657","SJAG_01014","SJAG_01203","SJAG_02723","SJAG_00452","SJAG_00738","SJAG_03575","SJAG_00054","SJAG_01253","SJAG_02244","SJAG_00312","SJAG_00666","SJAG_03638","SJAG_00435","SJAG_00644","SJAG_05329","SJAG_00855","SJAG_02822","SJAG_04853","SJAG_03858","SJAG_05022","SJAG_01544","SJAG_02419","SJAG_03699","SJAG_00188","SJAG_02591","SJAG_03454","SJAG_03763","SJAG_01131","SJAG_00651","SJAG_00071","SJAG_04633","SJAG_03350","SJAG_04211","SJAG_03561","SJAG_01737","SJAG_01593","SJAG_03408","SJAG_01585","SJAG_04969","SJAG_01535","SJAG_03048","SJAG_03680","SJAG_04309","SJAG_01900","SJAG_02041","SJAG_01392","SJAG_05236","SJAG_00475","SJAG_04229","SJAG_04661","SJAG_03417","SJAG_01956","SJAG_04540","SJAG_04384","SJAG_04335","SJAG_03385","SJAG_00341","SJAG_02197","SJAG_01637","SJAG_03321","SJAG_04541","SJAG_04088","SJAG_04151","SJAG_02162","SJAG_04477","SJAG_01489","SJAG_02186","SJAG_00808","SJAG_02900","SJAG_03651","SJAG_00762","SJAG_04484","SJAG_01886","SJAG_03037","SJAG_00941","SJAG_04888","SJAG_02021","SJAG_04520","SJAG_03191","SJAG_02705","SJAG_00128","SJAG_01472","SJAG_01556","SJAG_00642","SJAG_00052","SJAG_02485","SJAG_03968","SJAG_01068","SJAG_00146","SJAG_00300","SJAG_04612","SJAG_03219","SJAG_05274","SJAG_01678","SJAG_03809","SJAG_04619","SJAG_01617","SJAG_01467","SJAG_00173","SJAG_01679","SJAG_03345","SJAG_00293","SJAG_04144","SJAG_04539","SJAG_00712","SJAG_00552","SJAG_04573","SJAG_04306","SJAG_03151","SJAG_03615","SJAG_01134","SJAG_04572","SJAG_03175","SJAG_02562","SJAG_00766","SJAG_02651","SJAG_07000","SJAG_01074","SJAG_02992","SJAG_02502","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63675,66324,66542,67168,70152,70395,71218,71487,71699,72075,72276,72517,72648,72875,73299,73455,73990,74515,74601,75499,75748,76092,76808,77413,77655,77725,78237,78297,78380,78483,78719,78758,79059,79228,79363,79479,79661,79923,79987,80201,80342,80706,88634,88922,93696,94336,94496,94858,95323,96145,96565,98034,98723,99132,99959,101509,101971,102422,104676,106773,109552,109620,111028,111457,111467,112009,113121,113429,114556,115427,115566,116691,117500,118313],"is_not":false,"summary":null,"term":"GO:0043161"},{"annotations":[74274,79445,76906,112524,78092,80315,107912,60972,71079,114571,95501,105187,70612,73406,79319,80687,58025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031145"},{"annotations":[114713],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[109949,113926,110052,110644,108317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"},{"annotations":[113289,89601,88136,103724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180027"},{"annotations":[102677],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905785"},{"annotations":[77665,107268],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0032435"},{"annotations":[111167,76898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071630"},{"annotations":[89286],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905786"},{"annotations":[112022,109208,117370,102699,106975],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032436"},{"annotations":[114932],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032434"},{"annotations":[70204,97033,115714,76962,105138,104289,89605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990116"},{"annotations":[95874,102427,105192,107541,104911,117147,74558,98783,94688,72224,109397,98101,80619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031146"},{"annotations":[64802,74731,97275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071596"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"},{"relation_name":"is_a","term_name":"proteasomal protein catabolic 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id: GO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"positive regulation of amino acid transport","termid":"GO:0051957"},{"relation_name":"positively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900922"],"synonyms":[{"name":"activation of L-glutamate import","type":"narrow"},{"name":"activation of L-glutamate transport","type":"narrow"},{"name":"activation of L-glutamate uptake","type":"narrow"},{"name":"positive regulation of L-glutamate import","type":"broad"},{"name":"positive regulation of L-glutamate transport","type":"broad"},{"name":"positive regulation of L-glutamate uptake","type":"related"},{"name":"stimulation of L-glutamate transport","type":"narrow"},{"name":"up regulation of L-glutamate import","type":"exact"},{"name":"up regulation of L-glutamate transport","type":"broad"},{"name":"up regulation of L-glutamate uptake","type":"related"},{"name":"up-regulation of L-glutamate import","type":"exact"},{"name":"up-regulation of L-glutamate transport","type":"exact"},{"name":"up-regulation of L-glutamate uptake","type":"related"},{"name":"upregulation of L-glutamate import","type":"exact"},{"name":"upregulation of L-glutamate transport","type":"broad"},{"name":"upregulation of L-glutamate uptake","type":"related"}],"termid":"GO:0002038"}


id: PBO:0028558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle","termid":"PBO:0028558"}


id: PBO:0002174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein KEN box","termid":"PBO:0002174"}


id: GO:0141116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont prevents host complement activation by sequestering it away from its surface.","definition_xrefs":["PMID:18323455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by complement sequestering","synonyms":[{"name":"suppression of complement activation by another organism by complement sequestering","type":"broad"}],"termid":"GO:0141116"}


id: PBO:0069869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1156, pseudogene","termid":"PBO:0069869"}


id: GO:0030728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of a mature ovum/oocyte from an ovary.","definition_xrefs":["ISBN:0878932437","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation","secondary_identifiers":["Wikipedia:Ovulation"],"termid":"GO:0030728"}


id: PBO:0091208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His","termid":"PBO:0091208"}


id: GO:0004937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of alpha1-adrenergic receptors; the activity involves transmitting the signal to the Gq alpha subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:cb","GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-adrenergic receptor activity","termid":"GO:0004936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"alpha1-adrenergic receptor activity","synonyms":[{"name":"alpha1 adrenoceptor","type":"exact"}],"termid":"GO:0004937"}


id: FYPO:0007955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule polymerization, i.e. the additionl of tubulin dimers to a microtubule, is abnormal.","definition_xrefs":["PomBase:val","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"abnormal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal rate of microtubule polymerisation during vegetative growth","type":"exact"}],"termid":"FYPO:0007955"}


id: PBO:0109083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA induced by TGF-beta and antagonizes TGF-beta signaling 1","termid":"PBO:0109083"}


id: GO:1905839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric D-loop disassembly.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere","PMID:15200954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomeric loop disassembly","termid":"GO:1904534"},{"relation_name":"is_a","term_name":"regulation of telomeric D-loop disassembly","termid":"GO:1905838"},{"relation_name":"negatively_regulates","term_name":"telomeric D-loop disassembly","termid":"GO:0061820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomeric D-loop disassembly","synonyms":[{"name":"down regulation of telomeric D-loop disassembly","type":"exact"},{"name":"down-regulation of telomeric D-loop disassembly","type":"exact"},{"name":"downregulation of telomeric D-loop disassembly","type":"exact"},{"name":"inhibition of telomeric D-loop disassembly","type":"narrow"}],"termid":"GO:1905839"}


id: PBO:0014595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP4 complex subunit Psy2 (predicted)","termid":"PBO:0014595"}


id: PBO:0064553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 15, pseudogene","termid":"PBO:0064553"}


id: FYPO:0006518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering G0 phase.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nitrogen starvation","termid":"FYPO:0001178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability in G0","synonyms":[{"name":"loss of viability in cell quiescence","type":"exact"},{"name":"loss of viability in quiescence","type":"exact"}],"termid":"FYPO:0006518"}


id: MONDO:0002823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid gland medullary carcinoma (obsolete MONDO:0002823)","termid":"MONDO:0002823","xrefs":{"Monarch":{"xref_id":"0002823"}}}


id: PBO:0038867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase tRNA specific 1","termid":"PBO:0038867"}


id: PBO:0068005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 307","termid":"PBO:0068005"}


id: GO:1990418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an insulin-like growth factor stimulus.","definition_xrefs":["PMID:21932665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to insulin-like growth factor stimulus","termid":"GO:1990418"}


id: MONDO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the vulva. Representative examples include infection, Bartholin gland adenoma, and vulvar carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvar disease","secondary_identifiers":["DOID:2059","MESH:D014845","NCIT:C27631","MEDGEN:53055","UMLS:C0042994","SCTID:5089007"],"synonyms":[{"name":"disorder of vulva","type":"exact"},{"name":"vulval disorder","type":"related"},{"name":"vulvar disease","type":"exact"},{"name":"vulvar disorder","type":"exact"}],"termid":"MONDO:0002187","xrefs":{"Monarch":{"xref_id":"0002187"}}}


id: PBO:0031887
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae RFC3","termid":"PBO:0031887"}


id: PBO:0110195
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approval_in_progress_timestamp","termid":"PBO:0110195"}


id: GO:0033819
data:
  {"annotated_genes":["SJAG_01271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71041],"is_not":false,"summary":null,"term":"GO:0033819"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + octanoyl-[ACP] = H+ + holo-[ACP] + N6-octanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:17665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"lipoyl(octanoyl) transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN0-947","GO:0102555","Reactome:R-HSA-6793590","EC:2.3.1.181"],"synonyms":[{"name":"lipoate/octanoate transferase activity","type":"exact"},{"name":"lipoyl (octanoyl)-acyl carrier protein:protein transferase activity","type":"exact"},{"name":"lipoyl (octanoyl)-acyl-carrier-protein-protein N-lipoyltransferase activity","type":"exact"},{"name":"octanoyl transferase activity (acting on glycine-cleavage complex H protein)","type":"narrow"},{"name":"octanoyl-acyl carrier protein-protein N-octanoyltransferase activity","type":"exact"},{"name":"octanoyl-acyl-carrier-protein-protein N-octanoyltransferase activity","type":"exact"},{"name":"octanoyl-acyl-carrier-protein:protein N-octanoyltransferase activity","type":"exact"}],"termid":"GO:0033819","terms_by_termid":{"GO:0033819":null}}


id: GO:0048478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the collapse of stalled replication forks.","definition_xrefs":["GOC:vw","PMID:14560029"],"gene_count":0,"genotype_count":0,"name":"obsolete replication fork protection (obsolete GO:0048478)","synonyms":[{"name":"replication fork maintenance","type":"broad"},{"name":"replication fork stabilization","type":"broad"}],"termid":"GO:0048478"}


id: MOD:01257
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:14997490","PubMed:12716131","Unimod:194#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","termid":"MOD:00547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate - site K","synonyms":[{"name":"6-aminoquinolyl-N-hydroxysuccinimidyl carbamate","type":"related"},{"name":"AccQTag","type":"related"}],"termid":"MOD:01257"}


id: PBO:0049879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular carcinoma, down-regulated 1","termid":"PBO:0049879"}


id: RO:0002435
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interacts_with","termid":"RO:0002434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetically_interacts_with","termid":"RO:0002435"}


id: MONDO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Oropouche virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease","termid":"MONDO:0021641"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oropouche fever","secondary_identifiers":["SCTID:72880002","MEDGEN:547314","UMLS:C0276386","DOID:0050521"],"synonyms":[{"name":"Oropouche virus caused disease or disorder","type":"exact"},{"name":"Oropouche virus disease or disorder","type":"exact"},{"name":"Oropouche virus infectious disease","type":"exact"}],"termid":"MONDO:0000345","xrefs":{"Monarch":{"xref_id":"0000345"}}}


id: MONDO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Griscelli syndrome (obsolete MONDO:0000083)","termid":"MONDO:0000083","xrefs":{"Monarch":{"xref_id":"0000083"}}}


id: PBO:0026680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_arginine_level","termid":"PBO:0026680"}


id: PBO:0062869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 6A","termid":"PBO:0062869"}


id: PBO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc3","termid":"PBO:0002327"}


id: MONDO:0009155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"EEM syndrome is characterized by the association of ectodermal dysplasia, ectrodactyly, and macular dystrophy. So far, it has been described in individuals from seven families. Hypotrichosis, dental anomalies and absent eyebrows have also been reported. EMM syndrome appears to be transmitted as an autosomal recessive trait and may be caused by mutations in the cadherin-3 gene (CH3, 16q22.1).","definition_xrefs":["Orphanet:1897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328","MONDO:0002320","MONDO:0005497"],"is_obsolete":false,"name":"EEM syndrome","secondary_identifiers":["SCTID:720856002","UMLS:C1857041","MESH:C536190","DOID:0111649","OMIM:225280","MEDGEN:341679","GARD:2078"],"synonyms":[{"name":"EEM syndrome","type":"exact"},{"name":"EEMS","type":"related"},{"name":"ectodermal dysplasia, ectrodactyly, and macular dystrophy","type":"related"},{"name":"ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome","type":"related"},{"name":"ectodermal dysplasia-ectrodactyly-macular dystrophy syndrome","type":"exact"}],"termid":"MONDO:0009155","xrefs":{"Monarch":{"xref_id":"0009155"}}}


id: GO:2000170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-cysteine S-nitrosylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000169"},{"relation_name":"positively_regulates","term_name":"peptidyl-cysteine S-nitrosylation","termid":"GO:0018119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-cysteine S-nitrosylation","termid":"GO:2000170"}


id: PATO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration which has regular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regular duration","termid":"PATO:0001416"}


id: MONDO:0004063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iris melanoma characterized by the presence of intermediate cells which are similar to but smaller than epithelioid cells.","definition_xrefs":["NCIT:C6101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate cell type uveal melanoma","termid":"MONDO:0004062"},{"relation_name":"is_a","term_name":"iris melanoma","termid":"MONDO:0004064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"intermediate cell type iris melanoma","secondary_identifiers":["UMLS:C1334210","DOID:6993","MEDGEN:233564"],"synonyms":[{"name":"Intermediate cell type iris melanoma","type":"exact"},{"name":"intermediate cell type uveal melanoma of iris","type":"exact"},{"name":"iris intermediate cell type uveal melanoma","type":"exact"},{"name":"iris mixed cell melanoma","type":"related"}],"termid":"MONDO:0004063","xrefs":{"Monarch":{"xref_id":"0004063"}}}


id: SO:0000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters required for the correct positioning of the polymerase for the start of transcription. Overlaps the TSS. The mammalian consensus sequence is YYAN(T|A)YY; the Drosophila consensus sequence is TCA(G|T)t(T|C). In each the A is at position +1 with respect to the TSS. Functionally similar to the TATA box element.","definition_xrefs":["PMID:16858867","PMID:12651739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR_motif","synonyms":[{"name":"DMp2","type":"related"},{"name":"INR motif","type":"exact"},{"name":"initiator","type":"exact"},{"name":"initiator motif","type":"exact"}],"termid":"SO:0000014"}


id: PBO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 1","termid":"PBO:0046453"}


id: MOD:01205
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3 hydrogen atom of a serine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["PubMed:7949339","Unimod:160#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc2 glycosylated residue","termid":"MOD:00528"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 O-glycosylated serine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:01205"}


id: PBO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 18","termid":"PBO:0042498"}


id: GO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"negatively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell proliferation","synonyms":[{"name":"down regulation of mast cell proliferation","type":"exact"},{"name":"down-regulation of mast cell proliferation","type":"exact"},{"name":"downregulation of mast cell proliferation","type":"exact"},{"name":"inhibition of mast cell proliferation","type":"narrow"}],"termid":"GO:0070667"}


id: PBO:0108557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Esf1","termid":"PBO:0108557"}


id: FYPO:0006805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a galactosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abnormal galactosyltransferase activity","termid":"FYPO:0006805"}


id: PBO:0069368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 628, pseudogene","termid":"PBO:0069368"}


id: PBO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-GATA type","termid":"PBO:0000371"}


id: MONDO:0007929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein syndrome (obsolete MONDO:0007929)","secondary_identifiers":["NCIT:C131639"],"termid":"MONDO:0007929","xrefs":{"Monarch":{"xref_id":"0007929"}}}


id: PBO:0078854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 2","termid":"PBO:0078854"}


id: GO:0072315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric glomerular epithelial cell. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell fate commitment","termid":"GO:0072314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell fate commitment","termid":"GO:0072315"}


id: PBO:0072884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 2","termid":"PBO:0072884"}


id: GO:0010101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the post-embryonic root are generated and organized. The post-embryonic root is the root formed after the embryonic phase has been completed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"},{"relation_name":"part_of","term_name":"post-embryonic root development","termid":"GO:0048528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic root morphogenesis","termid":"GO:0010101"}


id: GO:0030232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex that binds to the insulin control element (ICE), a DNA sequence element found within the 5'-flanking region of the insulin gene, and activates ICE-mediated transcription.","definition_xrefs":["PMID:7935390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"insulin control element activator complex","synonyms":[{"name":"ICE activator complex","type":"exact"}],"termid":"GO:0030232"}


id: GO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of beta rings at one or both ends of the lycopene molecule (psi, psi-carotene) to form gamma-carotene or the bicyclic beta-carotene (beta, beta-carotene), respectively.","definition_xrefs":["PMID:8837512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0009975","GO:0016853"],"is_obsolete":false,"name":"lycopene beta cyclase activity","secondary_identifiers":["MetaCyc:RXN1F-150","RHEA:32219"],"synonyms":[{"name":"crtL","type":"related"},{"name":"lycopene cyclase","type":"broad"}],"termid":"GO:0045436"}


id: GO:0070701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular region part that consists of a protective layer of mucus secreted by epithelial cells lining tubular organs of the body such as the colon or secreted into fluids such as saliva. Mucus is a viscous slimy secretion consisting of mucins (i.e. highly glycosylated mucin proteins) and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes.","definition_xrefs":["PMID:18806221","GOC:krc","GOC:mm2","Wikipedia:Mucin","GOC:mah","PMID:19432394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"mucus layer","synonyms":[{"name":"extracellular proteinaceous gel","type":"broad"},{"name":"mucous","type":"exact"},{"name":"mucous layer","type":"exact"},{"name":"mucus","type":"exact"}],"termid":"GO:0070701"}


id: FYPO:0000194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to hydrogen peroxide is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress during vegetative growth","termid":"FYPO:0001340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cellular response to hydrogen peroxide","synonyms":[{"name":"abnormal cellular response to H2O2","type":"exact"},{"name":"abnormal cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000194"}


id: GO:0160019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["GOC:sl","GO_REF:0000058","PMID:15738422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterotypic cell-cell adhesion","termid":"GO:0034115"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"negatively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of platelet rolling","termid":"GO:0160019"}


id: PBO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ace2","termid":"PBO:0001951"}


id: GO:0010460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency or rate of heart contraction.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate","termid":"GO:0010460"}


id: PBO:0049761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2 pseudogene 1","termid":"PBO:0049761"}


id: GO:0006459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete binding unfolded ER proteins (obsolete GO:0006459)","synonyms":[{"name":"binding unfolded ER proteins","type":"exact"}],"termid":"GO:0006459"}


id: PBO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 1","termid":"PBO:0071754"}


id: MONDO:0019395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hinman syndrome (HS) or non-neurogenic neurogenic bladder is a voiding dysfunction of the bladder of neuropsychological origin that is characterized by functional bladder outlet obstruction in the absence of neurologic deficits.","definition_xrefs":["Orphanet:84085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hinman syndrome","secondary_identifiers":["ICD9:596.59","UMLS:C1997362","SCTID:429233001","GARD:19047","MEDGEN:744421"],"synonyms":[{"name":"HAS","type":"exact"},{"name":"HS","type":"exact"},{"name":"Hinman-Allen syndrome","type":"exact"},{"name":"non-neurogenic neurogenic bladder","type":"exact"},{"name":"occult neuropathic bladder","type":"exact"}],"termid":"MONDO:0019395","xrefs":{"Monarch":{"xref_id":"0019395"}}}


id: PBO:0013073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4","termid":"PBO:0013073"}


id: PBO:0038697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 9","termid":"PBO:0038697"}


id: PBO:0064017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 51","termid":"PBO:0064017"}


id: MONDO:0009393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic disorder of urea cycle metabolism characterized by either a neonatal-onset with manifestations of lethargy, poor feeding, vomiting and tachypnea or, more commonly, presentations in infancy, childhood or adulthood with chronic neurocognitive deficits, acute encephalopathy and/or coagulation defects or other chronic liver dysfunction.","definition_xrefs":["Orphanet:415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"urea cycle disorder or inherited hyperammonemia","termid":"MONDO:0800153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"ornithine translocase deficiency","secondary_identifiers":["MEDGEN:82815","GARD:2830","UMLS:C0268540","DOID:0050720","MESH:C538380","NANDO:2200485","NCIT:C129029","OMIM:238970","SCTID:30287008"],"synonyms":[{"name":"HHH","type":"related"},{"name":"HHH syndrome","type":"exact"},{"name":"HHHS","type":"related"},{"name":"Hhh syndrome","type":"related"},{"name":"ORNT1 deficiency","type":"exact"},{"name":"hyperornithinemia-hyperammonemia-homocitrullinemia syndrome","type":"exact"},{"name":"hyperornithinemia-hyperammonemia-homocitrullinuria (HHH) syndrome","type":"exact"},{"name":"hyperornithinemia-hyperammonemia-homocitrullinuria syndrome","type":"related"},{"name":"ornithine carrier deficiency","type":"exact"},{"name":"ornithine translocase deficiency","type":"exact"},{"name":"ornithine translocase deficiency syndrome","type":"related"},{"name":"triple H syndrome","type":"exact"}],"termid":"MONDO:0009393","xrefs":{"Monarch":{"xref_id":"0009393"}}}


id: GO:0045647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of erythrocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell differentiation","termid":"GO:0045638"},{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"negatively_regulates","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte differentiation","synonyms":[{"name":"down regulation of erythrocyte differentiation","type":"exact"},{"name":"down-regulation of erythrocyte differentiation","type":"exact"},{"name":"downregulation of erythrocyte differentiation","type":"exact"},{"name":"inhibition of erythrocyte differentiation","type":"narrow"},{"name":"negative regulation of RBC differentiation","type":"exact"},{"name":"negative regulation of red blood cell differentiation","type":"exact"}],"termid":"GO:0045647"}


id: MONDO:0034820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic multiple congenital anomalies/dysmorphic syndrome without intellectual disability characterized by unilateral or bilateral cleft lip and palate and craniofacial dysmorphism (including frontal bossing, hypertelorism, broad flat nasal bridge, cupped ears/thickened helices, and micrognathia). Additional manifestations are variable congenital cardiac anomalies, pectus excavatum, abnormalities of the hands and feet, ocular abnormalities (myopia, cataract, staphyloma), and conductive or sensorineural hearing loss.","definition_xrefs":["Orphanet:508476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip and palate-craniofacial dysmorphism-congenital heart defect-hearing loss syndrome","secondary_identifiers":["GARD:22068","UMLS:C5568767","MEDGEN:1800190"],"synonyms":[{"name":"cleft lip and palate-craniofacial dysmorphism-congenital heart defect-deafness syndrome","type":"exact"},{"name":"hyaluronidase 2 deficiency","type":"exact"}],"termid":"MONDO:0034820","xrefs":{"Monarch":{"xref_id":"0034820"}}}


id: GO:0042939
data:
  {"annotated_genes":["SJAG_01983","SJAG_01660","SJAG_05213","SJAG_03577","SJAG_01344","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[113438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[97383,118503,96403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[103328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of a tripeptide, a compound containing three amino acids linked together by peptide bonds, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"tripeptide transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042939","terms_by_termid":{"GO:0071996":null,"GO:0098709":null,"GO:0140207":null,"GO:0160007":null}}


id: PBO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 54","termid":"PBO:0039561"}


id: SO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The in-frame interval between the stop codons of a reading frame which when read as sequential triplets, has the potential of encoding a sequential string of amino acids. TER(NNN)nTER.","definition_xrefs":["SGD:rb","SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF","synonyms":[{"name":"open reading frame","type":"exact"}],"termid":"SO:0000236"}


id: PBO:0076156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 divergent transcript","termid":"PBO:0076156"}


id: PATO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's bodily structure that has protruded through an abnormal opening in the wall that contains it.","definition_xrefs":["spinalstenosis:spinalstenosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herniated","termid":"PATO:0000643"}


id: PBO:0079084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 1-1","termid":"PBO:0079084"}


id: GO:1903985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intestinal D-glucose absorption.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOA:als","PMID:22114352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"regulates","term_name":"intestinal D-glucose absorption","termid":"GO:0001951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intestinal D-glucose absorption","termid":"GO:1903985"}


id: GO:0038144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated receptor ERBB4. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB4.","definition_xrefs":["GOC:signaling","PMID:16978839","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ERBB4:ERBB2 complex","synonyms":[{"name":"ERBB4:ERBB2 heterodimer","type":"narrow"},{"name":"NRGs/EGFLs:ERBB4:ERBB2","type":"narrow"}],"termid":"GO:0038144"}


id: PR:O94581
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox12 gene.","definition_xrefs":["UniProtKB:O94581","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.08c","synonyms":[{"name":"Spom972h-cox12","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIb (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94581"}


id: PBO:0047476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 3","termid":"PBO:0047476"}


id: MONDO:0009319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pantothenate kinase-associated neurodegeneration (PKAN) is the most common type of neurodegeneration with brain iron accumulation (NBIA), a rare neurodegenerative disorder characterized by progressive extrapyramidal dysfunction (dystonia, rigidity, choreoathetosis), iron accumulation on the brain and axonal spheroids in the central nervous system.","definition_xrefs":["Orphanet:157850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroacanthocytosis","termid":"MONDO:0016987"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005066","MONDO:0002525","MONDO:0005559"],"is_obsolete":false,"name":"pantothenate kinase-associated neurodegeneration","secondary_identifiers":["MESH:D006211","OMIM:234200","UMLS:C0018523","SCTID:2992000","DOID:3981","GARD:6564","MEDGEN:6708","NANDO:2200886","NORD:1550","ICD9:333.0","NANDO:1200534","NCIT:C84988"],"synonyms":[{"name":"Hallervorden-Spatz disease","type":"exact"},{"name":"Hallervorden-Spatz syndrome","type":"exact"},{"name":"NBIA1","type":"exact"},{"name":"PKAN","type":"exact"},{"name":"Pkan neuroaxonal dystrophy, juvenile-onset","type":"related"},{"name":"brain iron accumulation type I syndrome","type":"broad"},{"name":"neuroaxonal dystrophy, late infantile","type":"related"},{"name":"neurodegeneration with brain iron accumulation 1","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 1","type":"exact"},{"name":"pantothenate kinase-associated neurodegeneration","type":"exact"},{"name":"pigmentary pallidal degeneration","type":"exact"}],"termid":"MONDO:0009319","xrefs":{"Monarch":{"xref_id":"0009319"}}}


id: PATO:0001003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001003 relative alternation value (obsolete PATO:0001003)","termid":"PATO:0001003"}


id: GO:0005881
data:
  {"annotated_genes":["SJAG_01224","SJAG_00655","SJAG_02509","SJAG_00140","SJAG_00332","SJAG_00594","SJAG_00851","SJAG_01196","SJAG_03264","SJAG_02045","SJAG_03540","SJAG_02761","SJAG_02336","SJAG_04841","SJAG_00113","SJAG_04387","SJAG_03073","SJAG_03052","SJAG_04003","SJAG_02624","SJAG_01613","SJAG_02651","SJAG_02695","SJAG_00723","SJAG_02286","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91484,104854,105181,113065,118432],"is_not":false,"summary":null,"term":"GO:0005881"},{"annotations":[107523,104326,99530,112431,107732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[99531,104196,108555,101740,98937,91713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[95535,104059,97898],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[97598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[114341,118945,102634,97301,104198,100688,89957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[88093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[91717,79249,108561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[97304],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"Any microtubule in the cytoplasm of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule","termid":"GO:0005874"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00594":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00851":null,"SJAG_01196":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"non-spindle-associated astral microtubule","type":"narrow"}],"termid":"GO:0005881","terms_by_termid":{"GO:0000235":null,"GO:0005881":null,"GO:0055028":null,"GO:0061673":null,"GO:0062194":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1990574":null}}


id: PBO:0049121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor associated sorting protein 1","termid":"PBO:0049121"}


id: FYPO:0004458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more DNA replication RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) when the cell is subject to nitrogen starvation. DNA replication RNAs are transcribed from genes whose products are involved in DNA replication.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of DNA replication gene mRNA during nitrogen starvation","synonyms":[{"name":"increased DNA replication gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"increased level of DNA replication gene RNA during nitrogen starvation","type":"exact"},{"name":"increased level of DNA replication gene mRNA during nitrogen depletion","type":"exact"},{"name":"increased level of DNA replication gene mRNA during nitrogen deprivation","type":"exact"},{"name":"increased level of DNA replication gene transcripts nitrogen starvation","type":"exact"}],"termid":"FYPO:0004458"}


id: MONDO:1012944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta that occurs in rabbits due to a mutation in the FAM83H gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, FAM83H-related, rabbit","secondary_identifiers":["OMIA:002600-9986"],"termid":"MONDO:1012944","xrefs":{"Monarch":{"xref_id":"1012944"}}}


id: GO:1990241
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that interacts selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. An example of this is STING in E. coli (Q86WV6).","definition_xrefs":["PMID:23910378","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide binding complex (obsolete GO:1990241)","synonyms":[{"name":"nucleotide binding complex","type":"exact"}],"termid":"GO:1990241"}


id: GO:0047097
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + phylloquinone = 2,3-epoxyphylloquinone + A + H2O.","definition_xrefs":["RHEA:16745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"phylloquinone monooxygenase (2,3-epoxidizing) activity","secondary_identifiers":["EC:1.14.99.20","MetaCyc:1.14.99.20-RXN","KEGG_REACTION:R03510"],"synonyms":[{"name":"phylloquinone epoxidase activity","type":"related"},{"name":"phylloquinone,hydrogen-donor:oxygen oxidoreductase (2,3-epoxidizing)","type":"related"},{"name":"vitamin K 2,3-epoxidase activity","type":"related"},{"name":"vitamin K epoxidase activity","type":"related"},{"name":"vitamin K1 epoxidase activity","type":"related"}],"termid":"GO:0047097"}


id: PBO:0073677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRPG antisense RNA 1","termid":"PBO:0073677"}


id: MONDO:0024635
data:
  {"annotated_genes":["SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87159,87158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","definition":"A disease that involves the small intestine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestine disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:119522002","MEDGEN:574283","UMLS:C0341268"],"synonyms":[{"name":"disease of small intestine","type":"exact"},{"name":"disease or disorder of small intestine","type":"exact"},{"name":"disorder of small intestine","type":"exact"},{"name":"small intestine disease or disorder","type":"exact"}],"termid":"MONDO:0024635","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0024635"}}}


id: PBO:0110381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGAE pseudogene 1","termid":"PBO:0110381"}


id: CHEBI:44485
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide","termid":"CHEBI:44485"}


id: GO:0051168
data:
  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id: PR:O74805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo51 gene.","definition_xrefs":["UniProtKB:O74805","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-51 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.14c","synonyms":[{"name":"Spom972h-myo51","type":"exact"},{"name":"myosin type V-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74805"}


id: FYPO:0001580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on leucine nitrogen source","synonyms":[{"name":"normal cell population growth on leucine nitrogen source","type":"exact"},{"name":"normal cell population growth on monomeric leucine nitrogen source","type":"exact"},{"name":"normal leucine utilization","type":"related"},{"name":"normal monomeric leucine utilization","type":"related"},{"name":"normal vegetative cell population growth on leucine nitrogen source","type":"exact"}],"termid":"FYPO:0001580"}


id: MONDO:0008998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cockayne syndrome type III, also known as the mild form of Cockayne syndrome, is a rare genetic disorder that causes early (premature) aging. Unlike the more severe forms of this condition, individuals with Cockayne syndrome type III can have normal growth and development. Symptoms may include sunlight sensitivity (photosensitivity), hearing loss, eye and bone abnormalities, and changes to the brain that can be seen on imaging (brain MRIs). In general, symptoms of Cockayne syndrome type III are usually not noticeable until later in childhood.","direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0019303","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne syndrome type 3","secondary_identifiers":["GARD:1417","UMLS:C0751037","icd11.foundation:1401163130","MEDGEN:196713","OMIM:216411","Orphanet:90324"],"synonyms":[{"name":"Cockayne syndrome type 3","type":"exact"},{"name":"Cockayne syndrome type C","type":"related"},{"name":"Cockayne syndrome type III","type":"exact"},{"name":"Cockayne syndrome, type III","type":"related"}],"termid":"MONDO:0008998","xrefs":{"Monarch":{"xref_id":"0008998"}}}


id: GO:0021587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellum is generated and organized. The cerebellum is the portion of the brain in the back of the head between the cerebrum and the pons. The cerebellum controls balance for walking and standing, modulates the force and range of movement and is involved in the learning of motor skills.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum morphogenesis","termid":"GO:0021587"}


id: PR:O94316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 116 kDa U5 small nuclear ribonucleoprotein component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03969","PANTHER:PTHR23115:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.12","secondary_identifiers":["UniProtKB:O94316"],"synonyms":[{"name":"114 kDa U5 small nuclear ribonucleoprotein component homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD2","type":"exact"},{"name":"complexed with cdc5 protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94316"}


id: PBO:0073954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 3","termid":"PBO:0073954"}


id: MONDO:0008209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Char syndrome is characterized by the triad of patent ductus arteriosus (PDA), facial dysmorphism and hand anomalies.","definition_xrefs":["Orphanet:46627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"patent ductus arteriosus","termid":"MONDO:0011827"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"TFAP2B-related congenital heart disease spectrum disorder","termid":"MONDO:1010098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Char syndrome","secondary_identifiers":["UMLS:C1868570","GARD:1237","MESH:C566815","DOID:0060563","MEDGEN:358356","OMIM:169100","SCTID:703534001","ICD9:759.89"],"synonyms":[{"name":"CHAR","type":"related"},{"name":"CHAR syndrome","type":"related"},{"name":"Char","type":"related"},{"name":"Char syndrome","type":"exact"},{"name":"patent ductus arteriosus with Facial Dysmorphism and abnormal fifth digits","type":"related"},{"name":"patent ductus arteriosus with facial dysmorphism and abnormal fifth digits","type":"exact"}],"termid":"MONDO:0008209","xrefs":{"Monarch":{"xref_id":"0008209"}}}


id: GO:0008975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Tyr16-Leu17 and Phe25-Tyr26 bonds of oxidized insulin B chain. Also acts on other substrates of Molecular weight less than 7 kDa such as insulin and glucagon.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pitrilysin activity (obsolete GO:0008975)","synonyms":[{"name":"Escherichia coli metalloproteinase Pi","type":"related"},{"name":"Escherichia coli protease III","type":"related"},{"name":"PTR","type":"related"},{"name":"pitrilysin activity","type":"exact"},{"name":"protease III activity","type":"related"},{"name":"protease Pi activity","type":"related"},{"name":"proteinase Pi","type":"related"}],"termid":"GO:0008975"}


id: FYPO:0006514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology","termid":"FYPO:0006512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere structure","synonyms":[{"name":"normal chromosome structure at telomere","type":"exact"},{"name":"normal chromosome structure at telomeric region","type":"exact"},{"name":"normal telomeric region structure","type":"exact"}],"termid":"FYPO:0006514"}


id: GO:0015291
data:
  {"annotated_genes":["SJAG_03595","SJAG_01059","SJAG_04616","SJAG_00276","SJAG_04406","SJAG_00612","SJAG_04028","SJAG_03820","SJAG_04673","SJAG_00233","SJAG_00057","SJAG_03960","SJAG_02779","SJAG_03608","SJAG_02780","SJAG_03401","SJAG_01406","SJAG_04698","SJAG_03606","SJAG_02463","SJAG_01183","SJAG_00275","SJAG_01872","SJAG_00547","SJAG_02050","SJAG_01033","SJAG_04068","SJAG_02958","SJAG_04714","SJAG_01541","SJAG_04241","SJAG_04506","SJAG_04905","SJAG_03951","SJAG_01960","SJAG_04096","SJAG_00339","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58569,72148,63824,75482,76956,93685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015297"},{"annotations":[58909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[103172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[78706,70530,91542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"},{"annotations":[71266,73571,73414,75171,73551,76710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[72892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[117509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[101001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[101977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[96103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[91543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010486"},{"annotations":[72441,73388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[113035,72462,116805,79193,71205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[73815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[80411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"},{"annotations":[65919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[80410,78462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015385"},{"annotations":[57529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[79598,72143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[101980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[75918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[112573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005371"},{"annotations":[95871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up its concentration gradient. 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id: GO:1904744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GO_REF:0000059","PMID:24415760","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomeric DNA binding","synonyms":[{"name":"activation of telomere binding","type":"narrow"},{"name":"activation of telomeric DNA binding","type":"narrow"},{"name":"activation of telomeric repeat binding","type":"narrow"},{"name":"positive regulation of telomere binding","type":"exact"},{"name":"positive regulation of telomeric repeat binding","type":"exact"},{"name":"up regulation of telomere binding","type":"exact"},{"name":"up regulation of telomeric DNA binding","type":"exact"},{"name":"up regulation of telomeric repeat binding","type":"exact"},{"name":"up-regulation of telomere binding","type":"exact"},{"name":"up-regulation of telomeric DNA binding","type":"exact"},{"name":"up-regulation of telomeric repeat binding","type":"exact"},{"name":"upregulation of telomere binding","type":"exact"},{"name":"upregulation of telomeric DNA binding","type":"exact"},{"name":"upregulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904744"}


id: PBO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 1 (predicted)","termid":"PBO:0005877"}


id: PBO:0042508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 2","termid":"PBO:0042508"}


id: PBO:0054575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1977","termid":"PBO:0054575"}


id: PBO:0072966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 1, pseudogene","termid":"PBO:0072966"}


id: PATO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000143 addictive substance (obsolete PATO:0000143)","termid":"PATO:0000143"}


id: PBO:0047430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 1","termid":"PBO:0047430"}


id: SO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding leucyl tRNA (SO:0000264).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine_tRNA_primary_transcript","synonyms":[{"name":"leucine tRNA primary transcript","type":"exact"}],"termid":"SO:0000221"}


id: PBO:0063492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 3","termid":"PBO:0063492"}


id: GO:0106220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrocyanin, an iminium betaine that is 5-methylphenazin-5-ium which is substituted at position 1 by an oxidanidyl group.","definition_xrefs":["PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyocyanine biosynthetic process","synonyms":[{"name":"pyocyanin biosynthetic process","type":"exact"}],"termid":"GO:0106220"}


id: GO:0097695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein-containing macromolecular complex to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:BHF_telomere","GOC:BHF","GOC:rph","PMID:26586433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"establishment of localization","termid":"GO:0051234"},{"relation_name":"part_of","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein-containing complex localization to telomere","synonyms":[{"name":"establishment of macromolecular complex localisation to telomere","type":"exact"},{"name":"establishment of macromolecular complex localization to telomere","type":"related"}],"termid":"GO:0097695"}


id: MONDO:0043330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Complication of cholelithiasis characterized by obstructive jaundice; abdominal pain, and fever.","definition_xrefs":["MESH:D057792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic cholestasis","termid":"MONDO:0006757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"Mirizzi syndrome","secondary_identifiers":["GARD:10177","icd11.foundation:381742412","Orphanet:521219","SCTID:4283007","MEDGEN:120605","UMLS:C0267878"],"synonyms":[{"name":"Mirizzi syndrome","type":"exact"},{"name":"Mirizzi's syndrome","type":"related"},{"name":"Mirizzis syndrome","type":"related"},{"name":"hepatic duct dystonia syndrome","type":"related"},{"name":"mirizzi's syndrome","type":"exact"},{"name":"syndrome, Mirizzi","type":"related"},{"name":"syndrome, Mirizzi's","type":"related"}],"termid":"MONDO:0043330","xrefs":{"Monarch":{"xref_id":"0043330"}}}


id: MONDO:0015358
data:
  {"annotated_genes":["SJAG_01383","SJAG_00031","SJAG_00252"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"},{"annotations":[87308,87309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","definition":"A group of slowly progressive inherited disorders affecting motor and sensory peripheral nerves. Subtypes include HMSNs I-VII. HMSN I and II both refer to CHARCOT-MARIE-Tooth DISEASE. HMSN III refers to hypertrophic neuropathy of infancy. HMSN IV refers to REFSUM DISEASE. HMSN V refers to a condition marked by a hereditary motor and sensory neuropathy associated with spastic paraplegia (see SPASTIC PARAPLEGIA, HEREDITARY). HMSN VI refers to HMSN associated with an inherited optic atrophy (OPTIC ATROPHIES, HEREDITARY), and HMSN VII refers to HMSN associated with retinitis pigmentosa. (From Adams et al., Principles of Neurology, 6th ed, p1343)","definition_xrefs":["MESH:D015417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:398100001","UMLS:C0027888","GARD:12685","NANDO:2200855","MEDGEN:45066","icd11.foundation:1538134578","Orphanet:140450"],"synonyms":[{"name":"HMSN","type":"exact"}],"termid":"MONDO:0015358","terms_by_termid":{"MONDO:0011002":null,"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0015358"}}}


id: PBO:0058932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12 kinetochore complex component","termid":"PBO:0058932"}


id: PBO:0079512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase 3","termid":"PBO:0079512"}


id: PBO:0066020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP1 pseudogene 1","termid":"PBO:0066020"}


id: PBO:0080001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase10 pseudogene 2","termid":"PBO:0080001"}


id: GO:0033068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of macrolides, any of a large group of polyketide compounds that contain a large lactone ring with few or no double bonds and no nitrogen atoms, linked glycosidically to one or more sugar groups. The macrolides include the carbomycins, the erythromycins, oleandomycin, oligomycins, and the spiramycins, and act as antibiotics, mainly against Gram-positive bacteria.","definition_xrefs":["ISBN:0198506732","PMID:17298179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"macrolide metabolic process","termid":"GO:0033067"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"macrolide biosynthetic process","synonyms":[{"name":"macrolide anabolism","type":"exact"},{"name":"macrolide biosynthesis","type":"exact"},{"name":"macrolide formation","type":"exact"},{"name":"macrolide synthesis","type":"exact"}],"termid":"GO:0033068"}


id: GO:0010160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that specifies animal organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.","definition_xrefs":["PMID:9611175","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"animal organ formation","termid":"GO:0048645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of animal organ boundary","secondary_identifiers":["GO:0048862"],"synonyms":[{"name":"organ boundary specification","type":"exact"}],"termid":"GO:0010160"}


id: GO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ether","termid":"GO:0071362"}


id: GO:0016651
data:
  {"annotated_genes":["SJAG_02016","SJAG_00235","SJAG_01869","SJAG_04270","SJAG_01539","SJAG_02794","SJAG_02191","SJAG_02395","SJAG_04397","SJAG_04152","SJAG_03476","SJAG_02154","SJAG_05015","SJAG_03098","SJAG_02697","SJAG_00972","SJAG_05033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77526,95446,95447],"is_not":false,"summary":null,"term":"GO:0016651"},{"annotations":[59549,78404,78040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004128"},{"annotations":[78799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003955"},{"annotations":[113162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[113163,97051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050136"},{"annotations":[65088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003959"},{"annotations":[77463,64937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003958"},{"annotations":[74724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003960"},{"annotations":[68244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016652"},{"annotations":[80402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016653"},{"annotations":[79620,79474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050664"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00972":null,"SJAG_01539":null,"SJAG_01869":null,"SJAG_02016":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02395":null,"SJAG_02697":null,"SJAG_02794":null,"SJAG_03098":null,"SJAG_03476":null,"SJAG_04152":null,"SJAG_04270":null,"SJAG_04397":null,"SJAG_05015":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.6.-.-","Reactome:R-HSA-109343","Reactome:R-HSA-8956458"],"synonyms":[{"name":"NAD(P)H dehydrogenase","type":"narrow"},{"name":"oxidoreductase activity, acting on NADH or NADPH","type":"related"},{"name":"oxidoreductase activity, acting on NADH or NADPH, other acceptor","type":"narrow"}],"termid":"GO:0016651","terms_by_termid":{"GO:0003955":null,"GO:0003958":null,"GO:0003959":null,"GO:0003960":null,"GO:0004128":null,"GO:0008137":null,"GO:0016651":null,"GO:0016652":null,"GO:0016653":null,"GO:0050136":null,"GO:0050664":null}}


id: PBO:0045717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 1","termid":"PBO:0045717"}


id: MONDO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Involuntary movements of the eye that are divided into two types, jerk and pendular. Jerk nystagmus has a slow phase in one direction followed by a corrective fast phase in the opposite direction, and is usually caused by central or peripheral vestibular dysfunction. Pendular nystagmus features oscillations that are of equal velocity in both directions and this condition is often associated with visual loss early in life. (Adams et al., Principles of Neurology, 6th ed, p272)","definition_xrefs":["MESH:D009759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pathologic nystagmus","termid":"MONDO:0004843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous ocular nystagmus","secondary_identifiers":["ICD9:379.53","SCTID:45339001","ICD10CM:H55.03","UMLS:C0271384","DOID:11771","MEDGEN:75748"],"synonyms":[{"name":"ocular nystagmus","type":"exact"},{"name":"searching eye movements","type":"exact"},{"name":"visual deprivation nystagmus","type":"exact"}],"termid":"MONDO:0001361","xrefs":{"Monarch":{"xref_id":"0001361"}}}


id: GO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which B cells acquire the specialized features of B-1a B cells. B-1a B cells are B-1 cells that express CD5 and arise from fetal liver precursors.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-1 B cell differentiation","termid":"GO:0001923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1a B cell differentiation","synonyms":[{"name":"B-1a B cell development","type":"related"},{"name":"B-1a B lymphocyte differentiation","type":"exact"},{"name":"B-1a B-cell differentiation","type":"exact"},{"name":"B-1a B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002337"}


id: GO:2000294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of defecation","termid":"GO:2000292"},{"relation_name":"positively_regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of defecation","termid":"GO:2000294"}


id: PBO:0067374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 475, pseudogene","termid":"PBO:0067374"}


id: FYPO:0002282
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is curved along the long axis, and has one or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"inviable curved septated vegetative cell","synonyms":[{"name":"inviable curved septated cell during vegetative growth","type":"exact"},{"name":"inviable curved septated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved septated vegetative cell","type":"exact"}],"termid":"FYPO:0002282"}


id: PBO:0089865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide mononucleotide (NMN) adenylyltransferase","termid":"PBO:0089865"}


id: PATO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000116 relative temperature sensitivity (obsolete PATO:0000116)","termid":"PATO:0000116"}


id: PBO:0039075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 3","termid":"PBO:0039075"}


id: MONDO:1011004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukodystrophy that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, non-human animal","termid":"MONDO:1010238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukodystrophy, American mink","secondary_identifiers":["OMIA:001130-452646"],"termid":"MONDO:1011004","xrefs":{"Monarch":{"xref_id":"1011004"}}}


id: MONDO:1011140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, domestic cat","secondary_identifiers":["OMIA:001764-9685"],"termid":"MONDO:1011140","xrefs":{"Monarch":{"xref_id":"1011140"}}}


id: PBO:0046078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 3","termid":"PBO:0046078"}


id: FYPO:0004996
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}],"single_locus_phenotype":[{"annotations":[119862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004718"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to a specific location on a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":2,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to chromosome","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"abnormal protein localisation to chromosome","type":"exact"}],"termid":"FYPO:0004996","terms_by_termid":{"FYPO:0001132":null,"FYPO:0004718":null,"FYPO_EXT:0000001":null}}


id: MONDO:0010128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyrocerebrorenal syndrome is characterized by renal, neurologic, thyroid disease, associated with thrombocytopenia. It has been described in a brother and his sister. Intelligence was normal. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:3327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrocerebrorenal syndrome","secondary_identifiers":["MESH:C536908","OMIM:274240","GARD:1646","MEDGEN:341311","UMLS:C1848813","SCTID:733096007"],"synonyms":[{"name":"Cutler Bass Romshe syndrome","type":"exact"},{"name":"Cutler-Bass-Romshe syndrome","type":"exact"},{"name":"thyrocerebral-retinal syndrome","type":"related"},{"name":"thyrocerebroretinal syndrome","type":"exact"}],"termid":"MONDO:0010128","xrefs":{"Monarch":{"xref_id":"0010128"}}}


id: PBO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 35","termid":"PBO:0050125"}


id: PBO:0088026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; forms extensive associations with the branch site-3' splice site-3' exon region upon prespliceosome formation; similarity to the mammalian U2 snRNP-associated splicing factor SAP155","termid":"PBO:0088026"}


id: GO:0071929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to the lysine 40 residue of alpha-tubulin.","definition_xrefs":["PMID:17786050","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal peptidyl-lysine acetylation","termid":"GO:0018393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-tubulin acetylation","termid":"GO:0071929"}


id: PBO:0063923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 2","termid":"PBO:0063923"}


id: PBO:0079822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like autophagy activating kinase 1","termid":"PBO:0079822"}


id: PBO:0064549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 11, pseudogene","termid":"PBO:0064549"}


id: GO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephron over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron development","synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0072006"}


id: PBO:0028733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynine_level_during_vegetative_growth","termid":"PBO:0028733"}


id: PBO:0028318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitochondrial_fission_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028318"}


id: GO:0052453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the directed movement of substances within the cell or cells of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont intracellular transport (obsolete GO:0052453)","synonyms":[{"name":"modulation by organism of symbiont intracellular transport","type":"exact"},{"name":"modulation of symbiont intracellular trafficking","type":"exact"}],"termid":"GO:0052453"}


id: PBO:0081514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 420","termid":"PBO:0081514"}


id: GO:0051270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the movement of a cellular component.","definition_xrefs":["GOC:dph","GOC:jl","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular component movement (obsolete GO:0051270)","synonyms":[{"name":"regulation of cell movement","type":"related"},{"name":"regulation of cellular component motion","type":"exact"}],"termid":"GO:0051270"}


id: GO:0050145
data:
  {"annotated_genes":["SJAG_02038","SJAG_04849","SJAG_00779","SJAG_03798"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72268,72351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[76279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[80760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleoside 5'-phosphate + ATP = a ribonucleoside 5'-diphosphate + ADP.","definition_xrefs":["RHEA:24036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null,"SJAG_03798":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"nucleoside monophosphate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-73548","Reactome:R-HSA-9754978","Reactome:R-HSA-6788810","MetaCyc:NUCLEOSIDE-PHOSPHATE-KINASE-RXN","Reactome:R-HSA-2162092","Reactome:R-HSA-75125","EC:2.7.4.4","Reactome:R-HSA-73635","GO:0019201","Reactome:R-HSA-6788798","Reactome:R-HSA-75126"],"synonyms":[{"name":"ATP:nucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"NMP-kinase activity","type":"related"},{"name":"nucleoside-phosphate kinase activity","type":"exact"},{"name":"nucleotide kinase activity","type":"related"}],"termid":"GO:0050145","terms_by_termid":{"GO:0004017":null,"GO:0004385":null,"GO:0033862":null}}


id: FYECO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Inorganic phosphate was excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate absent","termid":"FYECO:0000337"}


id: GO:0030720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Directed movement of the oocyte, following its specification, from its original central position in the cyst to a posterior position relative to the nurse cells of the egg chamber, and its maintenance in this posterior location. This is the first sign of anterior-posterior asymmetry in the developing egg chamber.","definition_xrefs":["PMID:10449356","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization of cell","termid":"GO:0051674"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"oocyte localization involved in germarium-derived egg chamber formation","synonyms":[{"name":"establishment and maintenance of oocyte localization in egg chamber","type":"exact"},{"name":"establishment and maintenance of oocyte position during oogenesis","type":"exact"},{"name":"oocyte localisation involved in germarium-derived egg chamber formation","type":"exact"},{"name":"oocyte localization during germarium-derived egg chamber formation","type":"related"},{"name":"oocyte localization during oogenesis","type":"related"},{"name":"oocyte positioning during oogenesis","type":"narrow"},{"name":"oogenesis, establishment and maintenance of oocyte localization","type":"exact"},{"name":"oogenesis, oocyte localization","type":"exact"}],"termid":"GO:0030720"}


id: PBO:0046545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FRD member 2","termid":"PBO:0046545"}


id: PATO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in an inactive muscle or muscle fibers by virtue of the bearer's exhibiting gradual lengthening.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001582 relaxational quality (obsolete PATO:0001582)","termid":"PATO:0001582"}


id: GO:0004567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing beta-D-mannose residues in beta-D-mannosides.","definition_xrefs":["EC:3.2.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosidase activity","termid":"GO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.25-RXN","Reactome:R-HSA-8853710"],"synonyms":[{"name":"beta-D-mannosidase activity","type":"related"},{"name":"beta-D-mannoside mannohydrolase activity","type":"related"},{"name":"beta-mannoside mannohydrolase activity","type":"related"},{"name":"exo-beta-D-mannanase activity","type":"related"},{"name":"mannanase activity","type":"related"},{"name":"mannase activity","type":"related"}],"termid":"GO:0004567"}


id: PBO:0071888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 26","termid":"PBO:0071888"}


id: GO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with alpha-latrotoxin, a potent presynaptic neurotoxin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:10025961","GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"latrotoxin receptor activity","synonyms":[{"name":"latrophilin","type":"narrow"}],"termid":"GO:0016524"}


id: PBO:0071070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 72","termid":"PBO:0071070"}


id: PBO:0047819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N4","termid":"PBO:0047819"}


id: GO:0031613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subunits that form the peripheral lid of the regulatory particle of a proteasome located in the nucleus of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, lid subcomplex","termid":"GO:0008541"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear proteasome regulatory particle","termid":"GO:0031598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear proteasome regulatory particle, lid subcomplex","termid":"GO:0031613"}


id: GO:0003940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-L-iduronosidic linkages in dermatan sulfate. Can also hydrolyze alpha-L-iduronosidic linkages in heparan sulfate.","definition_xrefs":["PMID:35011691","EC:3.2.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"L-iduronidase activity","secondary_identifiers":["Reactome:R-HSA-1793186","Reactome:R-HSA-1678716","Reactome:R-HSA-9036037","Reactome:R-HSA-9036041","MetaCyc:3.2.1.76-RXN","Reactome:R-HSA-2206299","Reactome:R-HSA-2090037"],"synonyms":[{"name":"alpha-L-iduronidase activity","type":"related"},{"name":"glycosaminoglycan alpha-L-iduronohydrolase activity","type":"related"}],"termid":"GO:0003940"}


id: PBO:0029359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dATP_level","termid":"PBO:0029359"}


id: FYPO:0001704
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119760,119840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which a specific mitotic cell cycle checkpoint is abnormal. A cell cycle checkpoint normally controls cell cycle progression by monitoring the timing and integrity of specific cell cycle events. In a mutant, the checkpoint may fail to activate under appropriate conditions, or may occur to a greater or lesser extent than wild type under any specified set of conditions.","definition_xrefs":["GO:0007093","PomBase:mah","GO:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint phenotype","termid":"FYPO:0000137"},{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal mitotic cell cycle checkpoint activation","type":"exact"}],"termid":"FYPO:0001704","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0017918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug166","termid":"PBO:0017918"}


id: PATO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000910 intercross sterile (obsolete PATO:0000910)","synonyms":[{"name":"intercross infertile","type":"related"}],"termid":"PATO:0000910"}


id: GO:0019706
data:
  {"annotated_genes":["SJAG_01112","SJAG_04451","SJAG_00895","SJAG_01299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68271,71458,73328,75370],"is_not":false,"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (systematic name, hexadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["RHEA:36683","GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-cysteine S-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9694341","Reactome:R-HSA-9829047","Reactome:R-HSA-5682084","Reactome:R-HSA-9647982","Reactome:R-HSA-9830875","Reactome:R-HSA-203567","EC:2.3.1.225","Reactome:R-HSA-9021072"],"synonyms":[{"name":"protein-cysteine S-palmitoleyltransferase activity","type":"related"}],"termid":"GO:0019706","terms_by_termid":{"GO:0019706":null}}


id: GO:1901676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K27 acetylation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K27 acetylation (obsolete GO:1901676)","synonyms":[{"name":"activation of histone H3 acetylation at K27","type":"exact"},{"name":"activation of histone H3-K27 acetylation","type":"narrow"},{"name":"activation of histone H3K27 acetylation","type":"exact"},{"name":"positive regulation of histone H3 acetylation at K27","type":"exact"},{"name":"positive regulation of histone H3K27 acetylation","type":"exact"},{"name":"up regulation of histone H3 acetylation at K27","type":"exact"},{"name":"up regulation of histone H3-K27 acetylation","type":"exact"},{"name":"up regulation of histone H3K27 acetylation","type":"exact"},{"name":"up-regulation of histone H3 acetylation at K27","type":"exact"},{"name":"up-regulation of histone H3-K27 acetylation","type":"exact"},{"name":"up-regulation of histone H3K27 acetylation","type":"exact"},{"name":"upregulation of histone H3 acetylation at K27","type":"exact"},{"name":"upregulation of histone H3-K27 acetylation","type":"exact"},{"name":"upregulation of histone H3K27 acetylation","type":"exact"}],"termid":"GO:1901676"}


id: GO:0033607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of superoxide dismutase 1 and Bcl-2. Complex formation is thought to link superoxide dismutase to an apoptotic pathway.","definition_xrefs":["PMID:15233914","PMID:16790527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SOD1-Bcl-2 complex","termid":"GO:0033607"}


id: MONDO:0018739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acquired neutropenia characterized by isolated neutropenia in a newborn due to maternal alloimmunization against human neutrophil antigens (HNA) inherited from the father and present on fetal neutrophils, and subsequent increased breakdown of the latter. The condition is self-limiting and resolves after several weeks. It usually presents with only mild bacterial infections or may even be asymptomatic, although severe forms with sepsis and fatal outcome have also been reported.","definition_xrefs":["Orphanet:464370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutropenia","termid":"MONDO:0001475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neonatal alloimmune neutropenia","secondary_identifiers":["SCTID:14333004","UMLS:C0272176","MEDGEN:543869","ICD10CM:P61.5","GARD:21929"],"termid":"MONDO:0018739","xrefs":{"Monarch":{"xref_id":"0018739"}}}


id: GO:1905513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GO_REF:0000058","PMID:15470145","GOC:TermGenie","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of short-term synaptic potentiation","termid":"GO:1905512"},{"relation_name":"negatively_regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of short-term synaptic potentiation","synonyms":[{"name":"down regulation of short-term synaptic potentiation","type":"exact"},{"name":"down regulation of synaptic facilitation","type":"exact"},{"name":"down-regulation of short-term synaptic potentiation","type":"exact"},{"name":"down-regulation of synaptic facilitation","type":"exact"},{"name":"downregulation of short-term synaptic potentiation","type":"exact"},{"name":"downregulation of synaptic facilitation","type":"exact"},{"name":"inhibition of short-term synaptic potentiation","type":"narrow"},{"name":"inhibition of synaptic facilitation","type":"narrow"},{"name":"negative regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905513"}


id: MONDO:1012440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lethal multi-organ developmental dysplasia, non-human animal","termid":"MONDO:1011785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal multi-organ developmental dysplasia, cattle","secondary_identifiers":["OMIA:001722-9913"],"termid":"MONDO:1012440","xrefs":{"Monarch":{"xref_id":"1012440"}}}


id: GO:0010844
data:
  {"annotated_genes":["SJAG_00266","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93101,108293],"is_not":false,"summary":null,"term":"GO:0010844"}]},"cv_name":"molecular_function","definition":"Binding to a genomic region which promotes recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"recombination hotspot binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA binding, recombination hotspot","type":"exact"}],"termid":"GO:0010844","terms_by_termid":{"GO:0010844":null}}


id: GO:1901334
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone metabolism","type":"exact"}],"termid":"GO:1901334","terms_by_termid":{"GO:0070485":null}}


id: PBO:0087080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L41B; comprises only 25 amino acids; rpl41a rpl41b double null mutant is viable; homologous to mammalian ribosomal protein L41, no bacterial homolog; RPL41B has a paralog, RPL41A, that arose from the whole genome duplication","termid":"PBO:0087080"}


id: PBO:0050414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 3","termid":"PBO:0050414"}


id: GO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transmembrane transporter activity (obsolete GO:0042971)","termid":"GO:0042971"}


id: MONDO:0015849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare vaginal malformation characterized by the presence of a complete or incomplete septum dividing the vagina into two parallel cavities, resulting from failure of reabsorption of the midline uterine septum between the two fused Müllerian ducts during embryogenesis. Patients are often asymptomatic, but may present with menorrhagia, dysmenorrhea, dyspareunia, infertility, or spontaneous abortion. The condition may occur as an isolated malformation or in association with other Müllerian duct anomalies (such as septate uterus or uterus didelphys) or renal abnormalities.","definition_xrefs":["Orphanet:180157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal vaginal septum","secondary_identifiers":["MEDGEN:331104","UMLS:C1841680","GARD:20190","icd11.foundation:1594393492","HP:0008740"],"termid":"MONDO:0015849","xrefs":{"Monarch":{"xref_id":"0015849"}}}


id: GO:1901039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptide antigen transport.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"is_a","term_name":"regulation of peptide transport","termid":"GO:0090087"},{"relation_name":"regulates","term_name":"peptide antigen transport","termid":"GO:0046968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of peptide antigen transport","termid":"GO:1901039"}


id: PR:Q9P3U7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght8 gene.","definition_xrefs":["UniProtKB:Q9P3U7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC548.06c","synonyms":[{"name":"Spom972h-ght8","type":"exact"},{"name":"hexose transporter 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U7"}


id: GO:0008097
data:
  {"annotated_genes":["SJAG_01568","SJAG_00323","SJAG_04066","SJAG_00067"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71459,72543,72680,89261],"is_not":false,"summary":null,"term":"GO:0008097"}]},"cv_name":"molecular_function","definition":"Binding to a 5S ribosomal RNA, the smallest RNA constituent of a ribosome.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00323":null,"SJAG_01568":null,"SJAG_04066":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"5S rRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008097","terms_by_termid":{"GO:0008097":null}}


id: MONDO:0012976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GJB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 2B","secondary_identifiers":["GARD:18131","MESH:C567214","OMIM:612644","MEDGEN:390742","UMLS:C2675236","DOID:0110559"],"synonyms":[{"name":"DFNA2B","type":"narrow"},{"name":"GJB3 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 2B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 2B","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GJB3","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 2B","type":"narrow"},{"name":"deafness, autosomal dominant 2B","type":"narrow"},{"name":"deafness, autosomal dominant 2b","type":"narrow"},{"name":"deafness, autosomal dominant type 2B","type":"narrow"}],"termid":"MONDO:0012976","xrefs":{"Monarch":{"xref_id":"0012976"}}}


id: PBO:0031312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell","termid":"PBO:0031312"}


id: GO:1902332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA duplex unwinding that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type DNA replication DNA duplex unwinding (obsolete GO:1902332)","synonyms":[{"name":"DNA duplex unwinding involved in bacterial-type DNA replication","type":"exact"},{"name":"DNA unwinding involved in bacterial-type DNA replication","type":"exact"},{"name":"duplex DNA melting involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902332"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: GO:0014832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract.","definition_xrefs":["PMID:18276178","GOC:mtg_muscle","PMID:538956","GOC:mr","PMID:11768524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"}


id: GO:1902259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:rl","PMID:11299204","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transporter activity","termid":"GO:1901016"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"}


id: PBO:0063550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penta-EF-hand domain containing 1","termid":"PBO:0063550"}


id: PATO:0002028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An osmolality which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolality","termid":"PATO:0002027"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolality","synonyms":[{"name":"low osmolality","type":"exact"}],"termid":"PATO:0002028"}


id: MONDO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulsating exophthalmos","secondary_identifiers":["MEDGEN:509887","DOID:12364","UMLS:C0155271","ICD9:376.35","SCTID:2284002","icd11.foundation:1825207679"],"termid":"MONDO:0001513","xrefs":{"Monarch":{"xref_id":"0001513"}}}


id: MONDO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stage 0 includes: 0a (Ta, N0, M0); 0is (Tis, N0, M0). Ta: Noninvasive papillary carcinoma. Tis: Carcinoma in situ: \\\"flat tumor\\\". N0: No regional lymph node metastasis. M0: No distant metastasis. (AJCC 6th and 7th eds.)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder transitional cell carcinoma","termid":"MONDO:0005611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-invasive bladder urothelial carcinoma","secondary_identifiers":["UMLS:C1336089","DOID:6571","MEDGEN:233466","NCIT:C6188"],"synonyms":[{"name":"non-invasive bladder urothelial carcinoma","type":"exact"},{"name":"stage 0 bladder urothelial cancer","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v6","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v6 and v7","type":"exact"},{"name":"stage 0 bladder urothelial carcinoma aJCC v7","type":"exact"},{"name":"stage 0 transitional cell carcinoma of bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of the bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of the urinary bladder","type":"exact"},{"name":"stage 0 transitional cell carcinoma of urinary bladder","type":"exact"},{"name":"stage 0 urinary bladder transitional cell carcinoma","type":"exact"}],"termid":"MONDO:0003930","xrefs":{"Monarch":{"xref_id":"0003930"}}}


id: GO:1990536
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76955,93684],"is_not":false,"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpyruvate into the Golgi lumen across the Golgi membrane.","definition_xrefs":["PMID:25195688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transmembrane transport","termid":"GO:0089722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane import into Golgi lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990536","terms_by_termid":{"GO:1990536":null}}


id: PBO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 10","termid":"PBO:0047177"}


id: PBO:0082433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bridging factor involved in ER-associated protein degradation (ERAD); bridges the cytosolic Cdc48p-Npl1p-Ufd1p ATPase complex and the membrane associated Ssm4p and Hrd1p ubiquitin ligase complexes; contains a UBX (ubiquitin regulatory X) domain and a ubiquitin-associated (UBA) domain; redistributes from the ER to lipid droplets during the diauxic shift and stationary phase; required for the maintenance of lipid homeostasis; required for mitochondrial protein translocation-associated degradation","termid":"PBO:0082433"}


id: PBO:0036117
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_protein-protein_interaction","termid":"PBO:0036117"}


id: GO:0080022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary root over time, from its formation to the mature structure. The primary root develops directly from the embryonic radicle.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary root development","termid":"GO:0080022"}


id: PBO:0086940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication","termid":"PBO:0086940"}


id: FYPO:0001007
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119694],"is_not":false,"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitosis","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"mitosis: normal","type":"exact"},{"name":"normal mitosis during mitotic cell cycle","type":"related"},{"name":"normal mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0001007","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: MONDO:0007711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bencze syndrome or hemifacial hyperplasia with strabismus is a malformation syndrome involving the abnormal growth of the facial skeleton as well as its soft tissue structure and organs, and is characterized by mild facial asymmetry with unaffected neurocranium and eyeballs, as well as by esotropia, amblyopia and/or convergent strabismus, and occasionally submucous cleft palate. Transmission is autosomal dominant. There have been no further descriptions in the literature since 1979.","definition_xrefs":["Orphanet:1241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bencze syndrome","secondary_identifiers":["MEDGEN:330655","GARD:2633","OMIM:141350","UMLS:C1841640","SCTID:733046006","MESH:C564199"],"synonyms":[{"name":"Bencze syndrome","type":"exact"},{"name":"hemifacial hyperplasia strabismus","type":"related"},{"name":"hemifacial hyperplasia with strabismus","type":"related"},{"name":"hemifacial hyperplasia-strabismus syndrome","type":"exact"}],"termid":"MONDO:0007711","xrefs":{"Monarch":{"xref_id":"0007711"}}}


id: PBO:0084397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; protein increases in abundance and relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0084397"}


id: GO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that controls blood pressure by sensing the amount of stretch occurring in the atria.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial baroreceptor feedback","synonyms":[{"name":"atrial baroreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"atrial control of blood pressure","type":"related"},{"name":"atrial low pressure baroreceptor regulation of blood pressure","type":"exact"},{"name":"atrial reflex","type":"related"}],"termid":"GO:0002015"}


id: PBO:0077858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM2 pseudogene 1","termid":"PBO:0077858"}


id: SO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The P1-derived artificial chromosome are DNA constructs that are derived from the DNA of P1 bacteriophage. They can carry large amounts (about 100-300 kilobases) of other sequences for a variety of bioengineering purposes. It is one type of vector used to clone DNA fragments (100- to 300-kb insert size; average, 150 kb) in Escherichia coli cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC","secondary_identifiers":["http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome"],"synonyms":[{"name":"P1","type":"exact"},{"name":"P1 artificial chromosome","type":"exact"}],"termid":"SO:0000154"}


id: FYPO:0003901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal triphosphatase activity","termid":"FYPO:0003901"}


id: PBO:0089895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron/zinc ion transmembrane transporter","termid":"PBO:0089895"}


id: PBO:0073421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEZ6L antisense RNA 1","termid":"PBO:0073421"}


id: SO:0002198
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002198"}


id: PBO:0058365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4737","termid":"PBO:0058365"}


id: GO:0140039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules as a result of an extracellular stimulus.","definition_xrefs":["PMID:14996911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion in response to extracellular stimulus","termid":"GO:0140039"}


id: PBO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 8","termid":"PBO:0050746"}


id: PBO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B4","termid":"PBO:0050494"}


id: GO:0061618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the basement membrane that lies beneath the lamina densa, containing anchoring fibrils, anchoring plaques, collagen fibers, and elastic fibers.","definition_xrefs":["GOC:BHF","PMID:15623520"],"gene_count":0,"genotype_count":0,"name":"obsolete sublamina densa (obsolete GO:0061618)","termid":"GO:0061618"}


id: MONDO:0015815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary cutaneous diffuse large B-cell lymphoma, leg type (obsolete MONDO:0015815)","termid":"MONDO:0015815","xrefs":{"Monarch":{"xref_id":"0015815"}}}


id: FYPO:0007503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone demethylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000654","FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal histone demethylase activity","termid":"FYPO:0007503"}


id: GO:1903348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GOC:jz","GO_REF:0000058","GOC:TermGenie","PMID:25050009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"positively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicellular tight junction assembly","synonyms":[{"name":"activation of tight junction assembly","type":"narrow"},{"name":"activation of tight junction formation","type":"narrow"},{"name":"positive regulation of tight junction formation","type":"exact"},{"name":"up regulation of tight junction assembly","type":"exact"},{"name":"up regulation of tight junction formation","type":"exact"},{"name":"up-regulation of tight junction assembly","type":"exact"},{"name":"up-regulation of tight junction formation","type":"exact"},{"name":"upregulation of tight junction assembly","type":"exact"},{"name":"upregulation of tight junction formation","type":"exact"}],"termid":"GO:1903348"}


id: GO:0102812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-coumaryl-CoA + cyanidin 3-O-beta-D-glucoside betaine = cyanidin 3-(p-coumaroyl)-glucoside + coenzyme A.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-coumaroyl-CoA:cyanidin-3-O-beta-D-glucoside-6''-O-acyltransferase activity (obsolete GO:0102812)","termid":"GO:0102812"}


id: FYPO:0000324
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119768,119769,119770],"is_not":false,"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the mitotic cell cycle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased duration of mitotic M phase","termid":"FYPO:0000274"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mitotic metaphase/anaphase transition delay","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000393","FYPO:0004309"],"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle passage through the metaphase-anaphase transition: delayed","type":"related"},{"name":"delayed cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"delayed mitotic anaphase B","type":"narrow"},{"name":"delayed mitotic metaphase/anaphase transition","type":"exact"},{"name":"delayed onset of anaphase B during mitotic cell cycle","type":"narrow"},{"name":"delayed onset of mitotic anaphase","type":"exact"},{"name":"delayed onset of mitotic anaphase B","type":"narrow"},{"name":"delayed onset of mitotic anaphase B during vegetative growth","type":"narrow"},{"name":"increased duration of metaphase during mitosis","type":"related"},{"name":"increased duration of mitotic metaphase","type":"related"},{"name":"metaphase/anaphase transition delay during mitotic cell cycle","type":"exact"},{"name":"mitotic anaphase delay","type":"exact"},{"name":"mitotic cell cycle delay at metaphase/anaphase transition","type":"exact"},{"name":"mitotic metaphase/anaphase transition delay during vegetative growth","type":"exact"},{"name":"transient cell cycle arrest in mitotic metaphase","type":"exact"}],"termid":"FYPO:0000324","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000324":null}}


id: PBO:0045328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK6 antisense RNA 1","termid":"PBO:0045328"}


id: PBO:0088296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21","termid":"PBO:0088296"}


id: PR:O43081
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC947.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C947.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.06c","synonyms":[{"name":"Spom972h-SPBC947.06c","type":"exact"}],"termid":"PR:O43081"}


id: FYPO:0002482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"spheroid vegetative cell","termid":"FYPO:0000021"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable spheroid vegetative cell","synonyms":[{"name":"inviable round vegetative cell","type":"related"},{"name":"inviable rounded vegetative cell","type":"exact"},{"name":"inviable spheroid cell","type":"exact"},{"name":"inviable spheroid cell during vegetative growth","type":"exact"},{"name":"inviable spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; spheroid vegetative cell","type":"exact"},{"name":"spheroid inviable cell","type":"exact"}],"termid":"FYPO:0002482"}


id: FYPO:0002483
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, has an abnormally low volume, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"inviable tapered vegetative cell","termid":"FYPO:0002111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"inviable small tapered vegetative cell","synonyms":[{"name":"inviable small bottle-shaped vegetative cell","type":"exact"},{"name":"inviable small bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable small bottle/skittle vegetative cell","type":"exact"},{"name":"inviable small skittle-shaped vegetative cell","type":"exact"},{"name":"inviable small tapered cell during vegetative growth","type":"exact"},{"name":"lethal; small tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002483"}


id: MONDO:0010507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xq25 microduplication syndrome","secondary_identifiers":["GARD:17955","NCIT:C177544","MEDGEN:935016","UMLS:C4311049","Orphanet:521258","OMIM:300979"],"synonyms":[{"name":"Xq25 duplication syndrome","type":"exact"},{"name":"Xq25 triplication syndrome","type":"related"}],"termid":"MONDO:0010507","xrefs":{"Monarch":{"xref_id":"0010507"}}}


id: PBO:0038403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-process_has_causal_agent","termid":"PBO:0038403"}


id: MONDO:0031400
data:
  {"annotated_genes":["SJAG_00303","SJAG_00336","SJAG_03542"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87471,87473,87472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030729"},{"annotations":[87467,87466,87468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030730"},{"annotations":[87174,87175,87176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030993"},{"annotations":[87179,87177,87178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031000"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_03542":null},"genotype_count":0,"is_obsolete":false,"name":"Tessadori-Van-Haaften neurodevelopmental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:619758"],"termid":"MONDO:0031400","terms_by_termid":{"MONDO:0030729":null,"MONDO:0030730":null,"MONDO:0030993":null,"MONDO:0031000":null},"xrefs":{"Monarch":{"xref_id":"0031400"}}}


id: GO:1900749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a (R)-carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","PMID:20357772","PMID:16365044","PMID:20829798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transport","termid":"GO:0015879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"(R)-carnitine transport","synonyms":[{"name":"(-)-Carnitine transport","type":"related"},{"name":"(-)-L-Carnitine transport","type":"related"},{"name":"(3R)-3-hydroxy-4-(trimethylammonio)butanoate transport","type":"exact"},{"name":"C7H15NO3 transport","type":"related"},{"name":"Carnicor transport","type":"related"},{"name":"Carnitene transport","type":"related"},{"name":"Carnitine transport","type":"related"},{"name":"Carnitor transport","type":"related"},{"name":"L-Carnitine transport","type":"exact"},{"name":"Levocarnitine transport","type":"related"},{"name":"Vitamin BT transport","type":"related"}],"termid":"GO:1900749"}


id: PBO:0076113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX18 antisense RNA 1 (head to head)","termid":"PBO:0076113"}


id: SO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with DNA.","definition_xrefs":["EBIBS:GAR","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_binding_site","termid":"SO:0001429"},{"relation_name":"is_a","term_name":"molecular_contact_region","termid":"SO:0100002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_DNA_contact","synonyms":[{"name":"DNA_bind","type":"exact"},{"name":"polypeptide DNA contact","type":"exact"}],"termid":"SO:0100020"}


id: PBO:0067082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 117, pseudogene","termid":"PBO:0067082"}


id: MONDO:0015895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with hypoparathyroidism (obsolete MONDO:0015895)","secondary_identifiers":["NANDO:2100124","NANDO:2200345","NANDO:1200775","Orphanet:181402"],"termid":"MONDO:0015895","xrefs":{"Monarch":{"xref_id":"0015895"}}}


id: MONDO:0004661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the tracheal mucosa and is confined to the epithelial layer without evidence of further tissue invasion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trachea squamous cell carcinoma","termid":"MONDO:0001419"},{"relation_name":"is_a","term_name":"squamous carcinoma in situ","termid":"MONDO:0004693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trachea carcinoma in situ","secondary_identifiers":["UMLS:C0154070","ICD9:231.1","DOID:8802","ICD10CM:D02.1","MEDGEN:57816","NCIT:C3639","SCTID:92772005"],"synonyms":[{"name":"carcinoma in situ of the trachea","type":"exact"},{"name":"carcinoma in situ of trachea","type":"exact"},{"name":"severe epithelial dysplasia of trachea","type":"exact"},{"name":"stage 0 trachea carcinoma","type":"exact"},{"name":"trachea carcinoma in situ","type":"exact"},{"name":"trachea in situ carcinoma","type":"exact"},{"name":"tracheal carcinoma in situ","type":"exact"}],"termid":"MONDO:0004661","xrefs":{"Monarch":{"xref_id":"0004661"}}}


id: PBO:0042482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 8","termid":"PBO:0042482"}


id: PBO:0091304
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript with all introns spliced represents 85% of total mRNA","termid":"PBO:0091304"}


id: MONDO:1010286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumothorax that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumothorax, non-human animal","secondary_identifiers":["OMIA:000804"],"termid":"MONDO:1010286","xrefs":{"Monarch":{"xref_id":"1010286"}}}


id: GO:0048332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the mesoderm are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm morphogenesis","termid":"GO:0048332"}


id: PBO:0065831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7A, member RAS oncogene family","termid":"PBO:0065831"}


id: FYPO:0000826
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"},{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"RNA accumulation: decreased","type":"related"},{"name":"decreased RNA accumulation","type":"related"},{"name":"decreased cellular RNA level","type":"exact"},{"name":"decreased cellular mRNA level","type":"narrow"},{"name":"decreased transcript level","type":"exact"},{"name":"reduced RNA level","type":"exact"}],"termid":"FYPO:0000826","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0021990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the flat, thickened layer of ectodermal cells known as the neural plate. The underlying dorsal mesoderm signals the ectodermal cells above it to elongate into columnar neural plate cells. The neural plate subsequently develops into the neural tube, which gives rise to the central nervous system.","definition_xrefs":["GOC:dgh","GOC:jid","PMID:15806586","ISBN:0878932585","GOC:dph","ISBN:0878932437","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate morphogenesis","termid":"GO:0001839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate formation","termid":"GO:0021990"}


id: GO:0033219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to urea, a water-soluble carboxamide with the structure H2N-CO-NH2.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"urea binding","termid":"GO:0033219"}


id: PBO:0061398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide B","termid":"PBO:0061398"}


id: MONDO:0003331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the ovary and is characterized by the presence of tissues derived exclusively from one embryonic germ cell layer.","definition_xrefs":["NCIT:C7286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian monodermal teratoma","secondary_identifiers":["DOID:5207","UMLS:C1302569","MEDGEN:266265"],"synonyms":[{"name":"monodermal teratoma","type":"exact"},{"name":"monodermal teratoma (morphologic abnormality)","type":"exact"},{"name":"ovarian monodermal teratoma","type":"exact"}],"termid":"MONDO:0003331","xrefs":{"Monarch":{"xref_id":"0003331"}}}


id: GO:0102510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = anthocyanidin 3,5-di-O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102510)","termid":"GO:0102510"}


id: PBO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 16","termid":"PBO:0052184"}


id: PBO:0054647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2052","termid":"PBO:0054647"}


id: MONDO:0008541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An emergency condition caused by the twisting of the spermatic cord which contains the vessels that provide the blood supply to the testis and surrounding structures. It manifests with acute testicular pain. If immediate medical assistance is not provided, it will lead to necrosis and loss of the testicular tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatic cord torsion","secondary_identifiers":["ICD9:608.2","MESH:D013086","UMLS:C0037856","OMIM:187400","NCIT:C26885","DOID:11996","ICD9:608.20","SCTID:81996005","MEDGEN:52446"],"synonyms":[{"name":"testicular torsion","type":"exact"},{"name":"torsion of testicle","type":"exact"},{"name":"torsion of testicular cord","type":"related"},{"name":"torsion of testis","type":"exact"}],"termid":"MONDO:0008541","xrefs":{"Monarch":{"xref_id":"0008541"}}}


id: PBO:0057794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-3","termid":"PBO:0057794"}


id: MONDO:0018740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methemoglobinemia that is caused by exposure to certain drugs (xylocaine and benzene).","definition_xrefs":["NCIT:C101045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methemoglobinemia","termid":"MONDO:0001117"},{"relation_name":"is_a","term_name":"acquired hemoglobinopathy","termid":"MONDO:0044349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"drug-induced methemoglobinemia","secondary_identifiers":["icd11.foundation:746336827","UMLS:C0472781","MEDGEN:632786","SCTID:191390009","GARD:21930","Orphanet:464453"],"synonyms":[{"name":"acquired methemoglobinemia","type":"broad"},{"name":"drug induced methemoglobinemia","type":"exact"}],"termid":"MONDO:0018740","xrefs":{"Monarch":{"xref_id":"0018740"}}}


id: PBO:0047120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 166 member C","termid":"PBO:0047120"}


id: PBO:0074411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 13","termid":"PBO:0074411"}


id: GO:0140107
data:
  {"annotated_genes":["SJAG_02883","SJAG_01353"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70931,72637],"is_not":false,"summary":null,"term":"GO:0140107"}]},"cv_name":"molecular_function","definition":"Enables the transfer of potassium ions from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10629185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"high-affinity potassium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140107","terms_by_termid":{"GO:0140107":null}}


id: PBO:0113536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein kinase; negatively regulates membrane fusion; associates with vacuolar membrane through palmitoylation of one or more cysteines in consensus sequence; vacuolar membrane association is essential to its kinase activity; targeted to vacuole via AP-3 pathway; mutant shows defect in CPY processing; ortholog of human serine/threonine kinase 16 (STK16)","termid":"PBO:0113536"}


id: PBO:0057963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3684","termid":"PBO:0057963"}


id: MONDO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disorder that involves plasma protein metabolism malfunction.","definition_xrefs":["DOID:2345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"plasma protein metabolism disease","secondary_identifiers":["MEDGEN:840208","UMLS:C3875058","ICD9:273.8"],"termid":"MONDO:0002273","xrefs":{"Monarch":{"xref_id":"0002273"}}}


id: MONDO:0017885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromophobe renal cell carcinoma is a rare subtype of renal cell carcinoma, originating from the intercalating cells of the collecting ducts and macroscopically manifesting as a well-circumscribed, highly lobulated, solid tumor that is usually diagnosed at an early stage. It is frequently asymptomatic, or may present with nonspecific symptoms, such as weight loss, fever or fatigue. The classic presentation observed in renal tumors (hematuria, flank pain and palpable mass) is occasionally observed and usually indicates an advanced stage of the disease. It is most frequently sporadic however, several familial cases, associated with Birt-Hogg DubC) syndrome, have been described.","definition_xrefs":["Orphanet:319303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"chromophobe renal cell carcinoma","secondary_identifiers":["DOID:4471","MEDGEN:266091","GARD:6064","ICDO:8317/3","EFO:0000335","ONCOTREE:CHRCC","SCTID:733471003","ICDO:8270/3","NCIT:C4146","UMLS:C1266042"],"synonyms":[{"name":"CHRCC","type":"related"},{"name":"CRCC","type":"related"},{"name":"ChRCC","type":"related"},{"name":"chromophobe adenocarcinoma","type":"exact"},{"name":"chromophobe carcinoma","type":"exact"},{"name":"chromophobe carcinoma of kidney","type":"exact"},{"name":"chromophobe carcinoma of the kidney","type":"exact"},{"name":"chromophobe cell carcinoma of kidney","type":"exact"},{"name":"chromophobe cell carcinoma of the kidney","type":"exact"},{"name":"chromophobe renal cell adenocarcinoma","type":"exact"},{"name":"chromophobe renal cell cancer","type":"exact"},{"name":"chromophobe renal cell carcinoma","type":"exact"},{"name":"kidney chromophobe","type":"exact"},{"name":"renal cell carcinoma, chromophobe cell","type":"exact"},{"name":"renal cell carcinoma, chromophobe type","type":"exact"}],"termid":"MONDO:0017885","xrefs":{"Monarch":{"xref_id":"0017885"}}}


id: MONDO:0008482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sprengel deformity","secondary_identifiers":["NORD:1736","Orphanet:3181","GARD:7693","OMIM:184400","MedDRA:10010455","UMLS:C0152438","MEDGEN:56291","MESH:C535802","SCTID:79120002","HP:0000912","icd11.foundation:2144522441"],"synonyms":[{"name":"Sprengel deformity","type":"exact"},{"name":"Sprengel deformity (disease)","type":"exact"},{"name":"Sprengel's deformity","type":"related"},{"name":"Sprengel's shoulder","type":"related"},{"name":"congenital elevation of the scapula","type":"related"},{"name":"congenital upward displacement of the scapula","type":"related"},{"name":"high scapula","type":"exact"}],"termid":"MONDO:0008482","xrefs":{"Monarch":{"xref_id":"0008482"}}}


id: PBO:0069364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 624, pseudogene","termid":"PBO:0069364"}


id: PBO:0046090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 1","termid":"PBO:0046090"}


id: GO:1903556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"down regulation of TNF superfamily production","type":"related"},{"name":"down regulation of TNFSF cytokine production","type":"exact"},{"name":"down regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"down-regulation of TNF superfamily production","type":"related"},{"name":"down-regulation of TNFSF cytokine production","type":"exact"},{"name":"down-regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"downregulation of TNF superfamily production","type":"related"},{"name":"downregulation of TNFSF cytokine production","type":"exact"},{"name":"downregulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"inhibition of TNF superfamily production","type":"related"},{"name":"inhibition of TNFSF cytokine production","type":"narrow"},{"name":"inhibition of tumor necrosis factor superfamily cytokine production","type":"narrow"},{"name":"negative regulation of TNF superfamily production","type":"related"},{"name":"negative regulation of TNFSF cytokine production","type":"exact"}],"termid":"GO:1903556"}


id: MONDO:0032641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 4","secondary_identifiers":["UMLS:C4748869","MEDGEN:1648342","GARD:16333","OMIM:618264"],"synonyms":[{"name":"MIRROR MOVEMENTS 4","type":"related"},{"name":"MRMV4","type":"related"}],"termid":"MONDO:0032641","xrefs":{"Monarch":{"xref_id":"0032641"}}}


id: GO:0061699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of a glutaryl group (CO-CH2-CH2--CH2-CO) from a glutarylated lysine residue in a peptide or protein.","definition_xrefs":["PMID:24703693","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine deglutarylation (obsolete GO:0061699)","termid":"GO:0061699"}


id: GO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-mandelamide + H2O = (R)-mandelate + NH4.","definition_xrefs":["EC:3.5.1.86","RHEA:22876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"mandelamide amidase activity","secondary_identifiers":["KEGG_REACTION:R05783","MetaCyc:3.5.1.86-RXN"],"synonyms":[{"name":"Pseudomonas mandelamide hydrolase activity","type":"related"},{"name":"mandelamide hydrolase activity","type":"related"}],"termid":"GO:0050537"}


id: PBO:0086193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to the human peptidyl-tRNA hydrolase gene ICT1; associates with mitochondrial large subunit; may function in translation termination; YOL114C is not an essential gene","termid":"PBO:0086193"}


id: PBO:0071830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 25","termid":"PBO:0071830"}


id: PBO:0017942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine transmembrane transporter Can1","termid":"PBO:0017942"}


id: MONDO:1011749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear IgA disease, non-human animal","secondary_identifiers":["OMIA:001330"],"termid":"MONDO:1011749","xrefs":{"Monarch":{"xref_id":"1011749"}}}


id: PBO:0063093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG activating RBM14 associated lncRNA 1","termid":"PBO:0063093"}


id: PBO:0061358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 18","termid":"PBO:0061358"}


id: GO:1904146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:22674394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903538"},{"relation_name":"positively_regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"activation of meiotic cell cycle process involved in oocyte maturation","type":"narrow"},{"name":"up regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"up-regulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"},{"name":"upregulation of meiotic cell cycle process involved in oocyte maturation","type":"exact"}],"termid":"GO:1904146"}


id: MONDO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises centrally from the jaw. It derives from odontogenic epithelial remnants. It includes solid type squamous cell carcinoma, squamous cell carcinoma that arises from an odontogenic cyst, and squamous cell carcinoma that derives from a keratocystic odontogenic tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary intraosseous squamous cell carcinoma","secondary_identifiers":["EFO:1000492","MEDGEN:313618","NCIT:C54295","UMLS:C1709663"],"synonyms":[{"name":"PIOSCC","type":"exact"}],"termid":"MONDO:0006385","xrefs":{"Monarch":{"xref_id":"0006385"}}}


id: GO:0036450
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92010],"is_not":false,"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that has been modified by the enzymatic addition of a sequence of uridylyl residues (polyuridylation) at the 3' end.","definition_xrefs":["PMID:19430462","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"},{"relation_name":"part_of","term_name":"polyuridylation-dependent mRNA catabolic process","termid":"GO:1990074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"polyuridylation-dependent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uridylation-dependent decapping of nuclear-transcribed mRNA","type":"broad"}],"termid":"GO:0036450","terms_by_termid":{"GO:0036450":null}}


id: PBO:0053706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 908","termid":"PBO:0053706"}


id: GO:0032923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphonates, any organic compound containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Synthesis of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"organic phosphonate metabolic process","termid":"GO:0019634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"organic phosphonate biosynthetic process","synonyms":[{"name":"organophosphonate biosynthetic process","type":"related"}],"termid":"GO:0032923"}


id: GO:0071440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K14 acetylation (obsolete GO:0071440)","synonyms":[{"name":"regulation of histone H3 acetylation at K14","type":"exact"},{"name":"regulation of histone H3K14 acetylation","type":"exact"}],"termid":"GO:0071440"}


id: _global:excluded_subClassOf
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"excluded_subClassOf","termid":"_global:excluded_subClassOf","xrefs":{"Monarch":{"xref_id":"excluded_subClassOf"}}}


id: PBO:0043494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 3","termid":"PBO:0043494"}


id: FYPO:0008013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mlr","PMID:35536002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal inositol hexakisphosphate kinase activity","termid":"FYPO:0008013"}


id: PBO:0081076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 8","termid":"PBO:0081076"}


id: PBO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 5","termid":"PBO:0048047"}


id: MOD:00763
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Biantennary (-1 galactose)","type":"related"},{"name":"Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00763"}


id: GO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of toll-like receptor signaling pathway","synonyms":[{"name":"negative regulation of TLR signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034122"}


id: GO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine biosynthetic process","synonyms":[{"name":"nicotine anabolism","type":"exact"},{"name":"nicotine biosynthesis","type":"exact"},{"name":"nicotine formation","type":"exact"},{"name":"nicotine synthesis","type":"exact"}],"termid":"GO:0042179"}


id: PBO:0081283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 66","termid":"PBO:0081283"}


id: GO:0102859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = (9Z,12Z,15Z)-octadecatrienoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"acyl-lipid omega-3 desaturase (cytochrome b5) activity","secondary_identifiers":["MetaCyc:RXN-16046","EC:1.14.19.25"],"synonyms":[{"name":"1-18:1-2-18:2-phosphatidylcholine desaturase activity (SN2-18:3 forming)","type":"exact"}],"termid":"GO:0102859"}


id: PBO:0091536
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae TPM1","termid":"PBO:0091536"}


id: PBO:0028530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_glucose_starvation","termid":"PBO:0028530"}


id: GO:0005278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + acetylcholine(in) = H+(in) + acetylcholine(out).","definition_xrefs":["TC:2.A.1.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylcholine transmembrane transporter activity","termid":"GO:0005277"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"acetylcholine:proton antiporter activity","synonyms":[{"name":"acetylcholine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0005278"}


id: MONDO:0021459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of esophagus","secondary_identifiers":["ICD10CM:D13.0","SCTID:92091003","MEDGEN:102297","NCIT:C3598","ICD9:211.0","UMLS:C0153942"],"synonyms":[{"name":"benign esophageal neoplasm","type":"exact"},{"name":"benign esophageal tumor","type":"exact"},{"name":"benign esophageal tumour","type":"exact"},{"name":"benign esophagus neoplasm","type":"exact"},{"name":"benign esophagus tumor","type":"exact"},{"name":"benign neoplasm of the esophagus","type":"exact"},{"name":"benign neoplasm of the oesophagus","type":"exact"},{"name":"benign oesophagus neoplasm","type":"exact"},{"name":"benign oesophagus tumour","type":"exact"},{"name":"benign tumor of esophagus","type":"exact"},{"name":"benign tumor of the esophagus","type":"exact"},{"name":"benign tumour of oesophagus","type":"exact"},{"name":"benign tumour of the oesophagus","type":"exact"},{"name":"esophagus benign neoplasm","type":"exact"},{"name":"oesophagus benign neoplasm","type":"exact"}],"termid":"MONDO:0021459","xrefs":{"Monarch":{"xref_id":"0021459"}}}


id: MONDO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma composed of large cells with abundant granular eosinophilic cytoplasm and large nuclei with prominent nucleoli.","definition_xrefs":["NCIT:C6042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oncocytic adenoma","termid":"MONDO:0003424"},{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland oncocytic adenoma","secondary_identifiers":["MEDGEN:237009","DOID:8162","ONCOTREE:OAT","UMLS:C1336750"],"synonyms":[{"name":"Hurthle cell adenoma","type":"related"},{"name":"Hurthle cell adenoma of the thyroid","type":"related"},{"name":"Hurthle cell adenoma of the thyroid gland","type":"related"},{"name":"Hurthle cell adenoma of thyroid","type":"related"},{"name":"Hurthle cell adenoma of thyroid gland","type":"related"},{"name":"OAT","type":"broad"},{"name":"benign oncocytoma of the thyroid","type":"exact"},{"name":"benign oncocytoma of the thyroid gland","type":"related"},{"name":"benign oncocytoma of thyroid","type":"related"},{"name":"benign oncocytoma of thyroid gland","type":"related"},{"name":"benign thyroid gland oncocytoma","type":"related"},{"name":"benign thyroid oncocytoma","type":"related"},{"name":"follicular adenoma of the thyroid gland of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of the thyroid of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid gland of oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid of oxyphilic cell type","type":"related"},{"name":"oncocytic adenoma of the thyroid","type":"related"},{"name":"oncocytic adenoma of the thyroid gland","type":"related"},{"name":"oncocytic adenoma of thyroid","type":"related"},{"name":"oncocytic adenoma of thyroid gland","type":"related"},{"name":"thyroid Hurthle cell adenoma","type":"related"},{"name":"thyroid follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland Hurthle cell adenoma","type":"related"},{"name":"thyroid gland follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid gland follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland oncocytic adenoma","type":"exact"},{"name":"thyroid oncocytic adenoma","type":"related"}],"termid":"MONDO:0004483","xrefs":{"Monarch":{"xref_id":"0004483"}}}


id: PBO:0045694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 2","termid":"PBO:0045694"}


id: MONDO:0008515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare congenital distal limb malformation characterized by complete bilateral syndactyly (involving all digits 1 to 5).","definition_xrefs":["Orphanet:93405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 4","secondary_identifiers":["GARD:4434","icd11.foundation:75755208","DOID:0111818","UMLS:C1861355","OMIM:186200","MESH:C566092","SCTID:719158007","MEDGEN:350013"],"synonyms":[{"name":"Haas type syndactyly","type":"related"},{"name":"LMBR1 non-syndromic syndactyly","type":"exact"},{"name":"SDTY4","type":"related"},{"name":"Sd4","type":"related"},{"name":"non-syndromic syndactyly caused by mutation in LMBR1","type":"exact"},{"name":"polysyndactyly type Haas","type":"related"},{"name":"polysyndactyly, Haas type","type":"exact"},{"name":"syndactyly, type 4","type":"related"},{"name":"syndactyly, type IV","type":"related"}],"termid":"MONDO:0008515","xrefs":{"Monarch":{"xref_id":"0008515"}}}


id: FYPO:0008281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate (1,5-IP8) measured in a cell is lower than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular myo-inositol level","termid":"FYPO:0008280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular 1,5-IP8 level","termid":"FYPO:0008281"}


id: PR:Q9UTD5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTD5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like-conjugating enzyme ATG10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.04","synonyms":[{"name":"Spom972h-atg10","type":"exact"},{"name":"autophagy-related protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTD5"}


id: MONDO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"trabecular follicular adenocarcinoma","secondary_identifiers":["MEDGEN:569646","UMLS:C0334327","DOID:3964"],"synonyms":[{"name":"follicular adenocarcinoma, trabecular","type":"exact"},{"name":"follicular adenocarcinoma, trabecular (morphologic abnormality)","type":"exact"},{"name":"trabecular follicular carcinoma","type":"exact"}],"termid":"MONDO:0002821","xrefs":{"Monarch":{"xref_id":"0002821"}}}


id: PBO:0028223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_splice_site_specificity","termid":"PBO:0028223"}


id: GO:0140635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a neutrophil away from the site of wound or infection following its initial migration to the site.","definition_xrefs":["PMID:31727891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil dispersal","termid":"GO:0140635"}


id: PBO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 fusion partner 1","termid":"PBO:0045034"}


id: PBO:0075352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sosondowah ankyrin repeat domain family member C","termid":"PBO:0075352"}


id: PBO:0069402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 662, pseudogene","termid":"PBO:0069402"}


id: PR:P50528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PLK1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase plo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.16","secondary_identifiers":["UniProtKB:P50528"],"synonyms":[{"name":"Spom972h-PLK1","type":"exact"}],"termid":"PR:P50528"}


id: MONDO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the orbit.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of orbit","secondary_identifiers":["DOID:14459","ICD9:228.09","NCIT:C6245","SCTID:121951000119101","MEDGEN:233268","UMLS:C1335128"],"synonyms":[{"name":"angioma of orbit","type":"exact"},{"name":"angioma of the orbit","type":"exact"},{"name":"hemangioma of the orbit","type":"exact"},{"name":"orbit angioma","type":"exact"},{"name":"orbit hemangioma","type":"exact"}],"termid":"MONDO:0001974","xrefs":{"Monarch":{"xref_id":"0001974"}}}


id: PBO:0114290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain-containing protein, involved in endocytosis pathway","termid":"PBO:0114290"}


id: PBO:0085760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in the cell cycle checkpoint into anaphase; in complex with Mad1p and Bub3p, prevents progression into anaphase in presence of spindle damage; Cdc28p-mediated phosphorylation at Bub1p-T566 is important for degradation in anaphase and adaptation of checkpoint to prolonged mitotic arrest; associates with centromere DNA via Skp1p; involved in Sgo1p relocalization in response to sister kinetochore tension; paralog MAD3 arose from whole genome duplication","termid":"PBO:0085760"}


id: GO:0017109
data:
  {"annotated_genes":["SJAG_00988","SJAG_03494"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77682,79134],"is_not":false,"summary":null,"term":"GO:0017109"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the ligation of glutamate to cysteine, forming glutamylcysteine.","definition_xrefs":["PMID:9675072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00988":null,"SJAG_03494":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"glutamate-cysteine ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"gamma-glutamylcysteine synthetase complex","type":"exact"}],"termid":"GO:0017109","terms_by_termid":{"GO:0017109":null}}


id: FYPO:0001803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has more than one septum apiece during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete multiseptate cell during cellular response to caffeine (obsolete FYPO:0001803)","synonyms":[{"name":"multiseptate cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"multiseptate cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"multiseptate in response to caffeine","type":"exact"}],"termid":"FYPO:0001803"}


id: GO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = D-glucose + strictosidine aglycone.","definition_xrefs":["RHEA:12917","EC:3.2.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"strictosidine beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R03820","MetaCyc:STRICTOSIDINE-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"strictosidine b-glucosidase activity","type":"exact"},{"name":"strictosidine beta-D-glucohydrolase activity","type":"related"}],"termid":"GO:0050422"}


id: PBO:0050544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS1 antisense RNA 1","termid":"PBO:0050544"}


id: RO:0002019
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between between a receptor and an chemical entity, typically a small molecule or peptide, that carries information between cells or compartments of a cell and which binds the receptor and regulates its effector function.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ligand","termid":"RO:0002019"}


id: PR:Q9Y7K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- san1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7K6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2A9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.04c","synonyms":[{"name":"Spom972h-san1","type":"exact"}],"termid":"PR:Q9Y7K6"}


id: MONDO:0006102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm characterized by the presence of neoplastic cells with hyperchromatic nuclei, small amount of cytoplasm, and peripheral nuclear palisading.","definition_xrefs":["NCIT:C4121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basaloid carcinoma","secondary_identifiers":["ICDO:8123/3","MEDGEN:316439","UMLS:C1704216","EFO:1000105"],"synonyms":[{"name":"basaloid carcinoma","type":"exact"}],"termid":"MONDO:0006102","xrefs":{"Monarch":{"xref_id":"0006102"}}}


id: GO:0009141
data:
  {"annotated_genes":["SJAG_00705","SJAG_00461","SJAG_00136","SJAG_05024","SJAG_02369","SJAG_04334","SJAG_00438","SJAG_02796","SJAG_03828","SJAG_03797","SJAG_00685","SJAG_06621","SJAG_00133","SJAG_00839","SJAG_02135","SJAG_02598","SJAG_04048","SJAG_02564","SJAG_MIT15","SJAG_07003","SJAG_00985","SJAG_02887","SJAG_05314","SJAG_MIT09","SJAG_04122","SJAG_00605","SJAG_01310","SJAG_02107","SJAG_02009","SJAG_02038","SJAG_03660","SJAG_00533","SJAG_04657","SJAG_02105","SJAG_04422","SJAG_00915","SJAG_00885","SJAG_03114","SJAG_02785","SJAG_03925","SJAG_03708","SJAG_04495","SJAG_00027","SJAG_MIT37","SJAG_04487","SJAG_00836","SJAG_04627","SJAG_00542","SJAG_03903","SJAG_05204","SJAG_04849","SJAG_06622","SJAG_02945","SJAG_03373","SJAG_04665","SJAG_01298","SJAG_04192","SJAG_03676","SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71093],"is_not":false,"summary":null,"term":"GO:0009141"},{"annotations":[63399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[67803,59483,67722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[98592,106148,103700,109702,105779,109704,109705,105778,116650,78210,109706,103956,95350,94861,98321,105780,106149,109703,109707,109701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[64617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[76820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[93311,68209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[62097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009204"},{"annotations":[99314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[92779,68982,71369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[79813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[88947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[75212,64615,102556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[76377,73408],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[118303],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[105332,116145,109103,89470,94209,95179,103351,108122,119358,119370,108214,93626,102136,119364,103997,103968,93195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[107573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009216"},{"annotations":[107575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009212"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[64616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a nucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside phosphate metabolic 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triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009141","terms_by_termid":{"GO:0006110":null,"GO:0006183":null,"GO:0006228":null,"GO:0006235":null,"GO:0006241":null,"GO:0009141":null,"GO:0009204":null,"GO:0009212":null,"GO:0009216":null,"GO:0035863":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:0045820":null,"GO:0046034":null,"GO:0046036":null,"GO:0046081":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: GO:0035633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining the structure and function of the blood-brain barrier, thus ensuring specific regulated transport of substances (e.g. macromolecules, small molecules, ions) into the brain, and out of the brain into the blood circulation.","definition_xrefs":["GOC:bf","GOC:bc","GOC:sl","PMID:30280653","PMID:20080302","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of blood-brain barrier","synonyms":[{"name":"maintenance of BBB","type":"exact"},{"name":"maintenance of blood/brain barrier","type":"exact"}],"termid":"GO:0035633"}


id: MONDO:0023609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"le Marec-Bracq-Picaud syndrome","secondary_identifiers":["MESH:C536997","UMLS:C2931385","MEDGEN:444043"],"synonyms":[{"name":"complex malformation syndrome with brachymesomelia","type":"related"}],"termid":"MONDO:0023609","xrefs":{"Monarch":{"xref_id":"0023609"}}}


id: GO:1901416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to ethanol","termid":"GO:1901416"}


id: MOD:01674
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminohexosyl)-L-asparagine.","definition_xrefs":["OMSSA:182","Unimod:43#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-(N-acetylamino)hexosyl-L-asparagine","synonyms":[{"name":"(S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"HexNAcAsn","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-hexopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylhexosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylhexosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4HexNAcAsn","type":"exact"},{"name":"hexNAcN","type":"exact"}],"termid":"MOD:01674"}


id: PBO:0069258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 513, pseudogene","termid":"PBO:0069258"}


id: PBO:0091597
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously incorrectly annotated as pex22","termid":"PBO:0091597"}


id: MONDO:0013282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-1-antitrypsin deficiency is a hereditary disease that develops in adulthood and is characterized by chronic liver disorders (cirrhosis), respiratory disorders (emphysema), and rarely panniculitis.","definition_xrefs":["Orphanet:60"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"plasma protein metabolism disease","termid":"MONDO:0002273"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"alpha 1-antitrypsin deficiency","secondary_identifiers":["SCTID:30188007","NORD:754","ICD10CM:E88.01","icd11.foundation:824872160","ICD9:273.4","UMLS:C0221757","MedDRA:10001806","NANDO:1200755","GARD:5784","MEDGEN:67461","NCIT:C84397","NANDO:2200611","OMIM:613490","DOID:13372","MESH:D019896","NANDO:2100174"],"synonyms":[{"name":"A-1ATD","type":"exact"},{"name":"A1AD","type":"exact"},{"name":"A1AT deficiency","type":"related"},{"name":"A1ATD","type":"related"},{"name":"AAT deficiency","type":"exact"},{"name":"AATD","type":"related"},{"name":"ALPHA-1-antitrypsin deficiency","type":"related"},{"name":"Alpha 1 antitrypsin deficiency","type":"related"},{"name":"Alpha-1 Antitrypsin Deficiency","type":"exact"},{"name":"Alpha-1 antitrypsin deficiency","type":"related"},{"name":"alpha 1-antitrypsin deficiency","type":"exact"},{"name":"alpha-1-antitrypsin deficiency","type":"related"},{"name":"deficiency in Alpa-1-proteinase inhibitor","type":"exact"},{"name":"emphysema due to AAT deficiency","type":"exact"},{"name":"emphysema-cirrhosis, due to AAT deficiency","type":"exact"},{"name":"hemorrhagic diathesis due to antithrombin pittsburgh","type":"exact"}],"termid":"MONDO:0013282","xrefs":{"Monarch":{"xref_id":"0013282"}}}


id: PBO:0050031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ beta 3","termid":"PBO:0050031"}


id: PBO:0086360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 7-keto-8-aminopelargonic acid (KAPA) synthetase; in sake strains and S. cerevisiae strains YJM627 and A364a; involved in the biotin biosynthesis pathway; homologs present in S. bayanus, S. paradoxus, S. mikatae and S. kudriavzevii","termid":"PBO:0086360"}


id: PBO:0052733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 25","termid":"PBO:0052733"}


id: PBO:0059051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific nuclear structural 1","termid":"PBO:0059051"}


id: GO:0070953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a fungal cell, the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"regulation of defense response to fungus","termid":"GO:1900150"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"}


id: PBO:0074466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small muscle protein X-linked","termid":"PBO:0074466"}


id: PBO:0079318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 9A","termid":"PBO:0079318"}


id: PBO:0081930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger NFX1-type containing 1","termid":"PBO:0081930"}


id: PBO:0027407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nonsense-mediated_decay","termid":"PBO:0027407"}


id: MONDO:0018770
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87171],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"Jeune syndrome, also called asphyxiating thoracic dystrophy, is a short-rib dysplasia characterized by a narrow thorax, short limbs and radiological skeletal abnormalities including \\\"trident\\\" aspect of the acetabula and metaphyseal changes.","definition_xrefs":["Orphanet:474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"short rib-polydactyly syndrome","termid":"MONDO:0015461"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Jeune syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84794","DOID:0050592","NORD:1074","OMIMPS:208500","icd11.foundation:554018956","MESH:C537571","GARD:3049","MEDGEN:78548","SCTID:75049004","UMLS:C0265275","MedDRA:10057621"],"synonyms":[{"name":"ATD","type":"related"},{"name":"Asphyxiating Thoracic Dystrophy","type":"exact"},{"name":"Chondroectodermal dysplasia-like syndrome","type":"related"},{"name":"JATD","type":"exact"},{"name":"Jeune asphyxiating thoracic dystrophy","type":"exact"},{"name":"Jeune syndrome","type":"exact"},{"name":"Jeune's syndrome","type":"related"},{"name":"asphyxiating thoracic dystrophy","type":"related"},{"name":"asphyxiating thoracic dystrophy of the newborn","type":"exact"},{"name":"infantile thoracic dystrophy","type":"related"},{"name":"short-rib thoracic dysplasia","type":"exact"},{"name":"short-rib thoracic dysplasia with or without polydactyly","type":"exact"},{"name":"thoracic pelvic phalangeal dystrophy","type":"exact"}],"termid":"MONDO:0018770","terms_by_termid":{"MONDO:0054565":null},"xrefs":{"Monarch":{"xref_id":"0018770"}}}


id: PR:O94720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.08 gene.","definition_xrefs":["UniProtKB:O94720","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA zinc finger domain-containing protein C1393.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.08","synonyms":[{"name":"Spom972h-SPCC1393.08","type":"exact"}],"termid":"PR:O94720"}


id: PBO:0116747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 related chromatin remodeling annealing helicase 1","termid":"PBO:0116747"}


id: MONDO:0017526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly of a triphalangeal thumb","termid":"MONDO:0008270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly of a triphalangeal thumb, bilateral","secondary_identifiers":["Orphanet:295150","icd11.foundation:866920497"],"synonyms":[{"name":"bilateral PPD2","type":"exact"},{"name":"preaxial polydactyly type 2, bilateral","type":"exact"}],"termid":"MONDO:0017526","xrefs":{"Monarch":{"xref_id":"0017526"}}}


id: MONDO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by caliciviridae. They include hepatitis E; vesicular exanthema of swine; acute respiratory infections in felines, rabbit hemorrhagic disease, and some cases of gastroenteritis in humans.","definition_xrefs":["MESH:D017250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caliciviridae infectious disease","secondary_identifiers":["EFO:0007189"],"synonyms":[{"name":"Caliciviridae infection","type":"related"},{"name":"Calicivirus infection","type":"related"},{"name":"Calicivirus infections","type":"related"},{"name":"infection, Caliciviridae","type":"related"},{"name":"infection, Calicivirus","type":"related"},{"name":"infections, Caliciviridae","type":"related"},{"name":"infections, Calicivirus","type":"related"}],"termid":"MONDO:0005687","xrefs":{"Monarch":{"xref_id":"0005687"}}}


id: PATO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000292 mobility value (obsolete PATO:0000292)","termid":"PATO:0000292"}


id: MONDO:0015938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic disease (obsolete MONDO:0015938)","termid":"MONDO:0015938","xrefs":{"Monarch":{"xref_id":"0015938"}}}


id: PBO:0070741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 11","termid":"PBO:0070741"}


id: GO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter metabolic process (obsolete GO:0042133)","synonyms":[{"name":"neurotransmitter metabolism","type":"exact"}],"termid":"GO:0042133"}


id: MOD:01347
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and an L-lysine residue to form a Schiff-base or an Amadori ketosamine lysine adduct.","definition_xrefs":["DeltaMass:0","PubMed:15279557","Unimod:41#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycated residue","termid":"MOD:00767"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexose glycated L-lysine","synonyms":[{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"}],"termid":"MOD:01347"}


id: MONDO:0007726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beukes familial hip dysplasia (BFHD) is a primary bone dysplasia, characterized by premature degenerative arthropathy of the hip. The disease presents with hip joint discomfort/pain and gait disturbances that usually develops in childhood and that progresses to severe functional disability and limited mobility by early adulthood. Involvement of the vertebral bodies and other joints is minimal, height is not significantly reduced, and general health is unimpaired. Radiographically, the femoral heads are flattened and irregular and degenerative osteoarthritis develops in the hip joints, as evidenced by the presence of periarticular cysts, sclerosis, and joint space narrowing.","definition_xrefs":["Orphanet:2114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hip dysplasia, Beukes type","secondary_identifiers":["GARD:2690","OMIM:142669","MESH:C564185","UMLS:C1840572","DOID:0111367","MEDGEN:333593","SCTID:721148005"],"synonyms":[{"name":"BFHD","type":"exact"},{"name":"BHD","type":"related"},{"name":"Beukes familial hip dysplasia","type":"exact"},{"name":"Beukes hip dysplasia","type":"related"},{"name":"Cilliers-Beighton syndrome","type":"exact"},{"name":"hip dysplasia Beukes type","type":"related"},{"name":"hip dysplasia, Beukes type","type":"exact"},{"name":"osteoarthropathy, premature degenerative, of hip","type":"related"},{"name":"premature degenerative osteoarthropathy of the hip","type":"exact"}],"termid":"MONDO:0007726","xrefs":{"Monarch":{"xref_id":"0007726"}}}


id: SO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified isoleucine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_isoleucine","secondary_identifiers":["MOD:00910"],"synonyms":[{"name":"ModIle","type":"exact"},{"name":"modified L isoleucine","type":"exact"},{"name":"modified L-isoleucine","type":"exact"}],"termid":"SO:0001396"}


id: PATO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000885 male fertility value (obsolete PATO:0000885)","termid":"PATO:0000885"}


id: PBO:0084703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial GTPase, present in complex with Ugo1p and Fzo1p; required for mitochondrial morphology, fusion, and genome maintenance; promotes membrane bending; plays a direct role in formation and maintenance of lamellar, but not of tubular, cristae; exists as long and short form with different distributions; ratio of long to short forms is regulated by Psd1p; homolog of human OPA1 involved in autosomal dominant optic atrophy","termid":"PBO:0084703"}


id: MONDO:0013294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 4q22.1.","definition_xrefs":["PMID:19517137","DOID:0110104","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 8","secondary_identifiers":["OMIM:613518","MEDGEN:462113","UMLS:C3150763"],"synonyms":[{"name":"ATOD8","type":"exact"},{"name":"atopic dermatitis type 8","type":"exact"},{"name":"dermatitis, atopic, 8","type":"exact"},{"name":"dermatitis, atopic, severity of","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0013294","xrefs":{"Monarch":{"xref_id":"0013294"}}}


id: PATO:0001355
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality that obtains by virtue of the bearer having inward facing edges; having a surface or boundary that curves or bulges outward, as the exterior of a sphere.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concavity","termid":"PATO:0002005"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex","termid":"PATO:0001355"}


id: PBO:0050812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0050812"}


id: GO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a nephron in the mesonephros over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron development","termid":"GO:0061215"}


id: PBO:0090434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase Mtq2","termid":"PBO:0090434"}


id: FYPO:0004498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"normal positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"exact"},{"name":"normal positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004498"}


id: GO:0071925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of thymic stromal lymphopoietin (TSLP) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:17129180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"thymic stromal lymphopoietin production","synonyms":[{"name":"TSLP production","type":"exact"}],"termid":"GO:0071925"}


id: GO:0016579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more ubiquitin groups from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deubiquitination","secondary_identifiers":["GO:0006514","Reactome:R-HSA-5688426"],"synonyms":[{"name":"deubiquitination","type":"exact"},{"name":"protein deubiquitinylation","type":"exact"},{"name":"protein deubiquitylation","type":"exact"}],"termid":"GO:0016579"}


id: FYPO:0008178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at normal levels (i.e. indistinguishable from wild-type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric RNA level during vegetative growth","termid":"FYPO:0008177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal centromeric inner repeat transcript level","termid":"FYPO:0008178"}


id: MONDO:0002459
data:
  {"annotated_genes":["SJAG_00610","SJAG_03453","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013767"},{"annotations":[86173,86172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000024"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of type IV hypersensitivity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type IV hypersensitivity disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2916","MEDGEN:9371","NCIT:C3115","UMLS:C0020522"],"synonyms":[{"name":"DTH","type":"exact"},{"name":"delayed hypersensitivity reaction","type":"exact"},{"name":"delayed-type hypersensitivity","type":"exact"},{"name":"delayed-type hypersensitivity response","type":"exact"},{"name":"disorder of type IV hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction type IV disease","type":"related"},{"name":"immunoproliferative disease","type":"related"},{"name":"type 4 hypersensitivity reaction","type":"exact"},{"name":"type IV hypersensitivity","type":"exact"},{"name":"type IV hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0002459","terms_by_termid":{"MONDO:0013767":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0002459"}}}


id: GO:1905069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an allantois over time, from its formation to the mature structure.","definition_xrefs":["PMID:17440924","GO_REF:0000094","GOC:TermGenie","PMID:21470579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraembryonic membrane development","termid":"GO:1903867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"allantois development","synonyms":[{"name":"allantoic bud development","type":"related"}],"termid":"GO:1905069"}


id: PBO:0069749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1031, pseudogene","termid":"PBO:0069749"}


id: GO:0098930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"axonal transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"exact"},{"name":"axoplasmic transport","type":"exact"}],"termid":"GO:0098930"}


id: GO:0046532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoreceptor cell differentiation. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoreceptor cell differentiation","secondary_identifiers":["GO:0045673"],"synonyms":[{"name":"regulation of photoreceptor differentiation","type":"exact"}],"termid":"GO:0046532"}


id: PBO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLE1 RNA export mediator","termid":"PBO:0048680"}


id: MONDO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the lacrimal apparatus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal system cancer","secondary_identifiers":["MEDGEN:272790","SCTID:416510003","NCIT:C5102","UMLS:C1334361","DOID:292"],"synonyms":[{"name":"cancer of lacrimal apparatus","type":"exact"},{"name":"lacrimal apparatus cancer","type":"exact"},{"name":"lacrimal system neoplasm","type":"exact"},{"name":"lacrimal system neoplasms","type":"exact"},{"name":"lacrimal system tumor","type":"exact"},{"name":"lacrimal system tumour","type":"exact"},{"name":"malignant lacrimal apparatus neoplasm","type":"exact"},{"name":"malignant neoplasm of lacrimal apparatus","type":"exact"},{"name":"neoplasm of lacrimal system","type":"exact"},{"name":"neoplasm of the lacrimal system","type":"exact"},{"name":"tumor of lacrimal system","type":"exact"},{"name":"tumor of the lacrimal system","type":"exact"},{"name":"tumour of lacrimal system","type":"exact"},{"name":"tumour of the lacrimal system","type":"exact"}],"termid":"MONDO:0002460","xrefs":{"Monarch":{"xref_id":"0002460"}}}


id: PBO:0078800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 18-1","termid":"PBO:0078800"}


id: PATO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer being divided into four parts.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quadripartite","termid":"PATO:0002447"}


id: PBO:0073349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINB9 antisense RNA 1","termid":"PBO:0073349"}


id: MONDO:0010035
data:
  {"annotated_genes":["SJAG_03024"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87568],"is_not":false,"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"Smith-Lemli-Opitz syndrome (SLOS) is characterized by multiple congenital anomalies, intellectual deficit, and behavioral problems.","definition_xrefs":["Orphanet:818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"cholesterol biosynthetic process disease","termid":"MONDO:0045017"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0002525"],"is_obsolete":false,"name":"Smith-Lemli-Opitz syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1724","SCTID:43929004","UMLS:C0175694","NANDO:1200961","OMIM:270400","ICD9:759.89","DOID:14692","GARD:5683","icd11.foundation:1231469858","MEDGEN:61231","NANDO:2200979","NCIT:C85071","MESH:D019082","ICD10CM:E78.72"],"synonyms":[{"name":"7-dehydrocholesterol reductase deficiency","type":"exact"},{"name":"RSH syndrome","type":"exact"},{"name":"Rutledge lethal multiple congenital anomaly syndrome","type":"exact"},{"name":"SLO syndrome","type":"exact"},{"name":"SLOS","type":"exact"},{"name":"Smith Lemli Opitz syndrome","type":"related"},{"name":"Smith-Lemli-Opitz syndrome","type":"exact"},{"name":"Smith-Opitz-inborn syndrome","type":"exact"},{"name":"lethal acrodysgenital syndrome","type":"related"},{"name":"polydactyly, sex reversal, renal hypoplasia, and unilobar lung","type":"related"},{"name":"polydactyly, sex reversal, renal hypoplasia, and unilobular lung","type":"related"}],"termid":"MONDO:0010035","terms_by_termid":{"MONDO:0010035":null},"xrefs":{"Monarch":{"xref_id":"0010035"}}}


id: GO:0090553
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection part that is the apical most portion of a unicellular trichome apex.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"unicellular trichome apex","termid":"GO:0090552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"unicellular trichome tip","termid":"GO:0090553"}


id: PBO:0065453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 1","termid":"PBO:0065453"}


id: GO:1903919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament severing.","definition_xrefs":["GOC:als","PMID:23325791","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"negatively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament severing","synonyms":[{"name":"down regulation of F-actin severing","type":"exact"},{"name":"down regulation of actin filament severing","type":"exact"},{"name":"down regulation of actin filament severing activity","type":"related"},{"name":"down regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"down-regulation of F-actin severing","type":"exact"},{"name":"down-regulation of actin filament severing","type":"exact"},{"name":"down-regulation of actin filament severing activity","type":"related"},{"name":"down-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"downregulation of F-actin severing","type":"exact"},{"name":"downregulation of actin filament severing","type":"exact"},{"name":"downregulation of actin filament severing activity","type":"related"},{"name":"downregulation of barbed-end actin capping/severing activity","type":"related"},{"name":"inhibition of F-actin severing","type":"narrow"},{"name":"inhibition of actin filament severing","type":"narrow"},{"name":"inhibition of actin filament severing activity","type":"related"},{"name":"inhibition of barbed-end actin capping/severing activity","type":"related"},{"name":"negative regulation of F-actin severing","type":"exact"},{"name":"negative regulation of actin filament severing activity","type":"related"},{"name":"negative regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903919"}


id: GO:0047171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucarolactone + sinapoyl-CoA = O-sinapoylglucarolactone + CoA.","definition_xrefs":["MetaCyc:2.3.1.132-RXN","EC:2.3.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucarolactone O-hydroxycinnamoyltransferase activity","secondary_identifiers":["RHEA:14261"],"synonyms":[{"name":"sinapoyl-CoA:glucarolactone O-(hydroxycinnamoyl)transferase activity","type":"related"}],"termid":"GO:0047171"}


id: PATO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing excess lipid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty","termid":"PATO:0002114"}


id: GO:2000510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"},{"relation_name":"positively_regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell chemotaxis","termid":"GO:2000510"}


id: PBO:0081443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300","termid":"PBO:0081443"}


id: MONDO:0016788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Genetic hyperferritinemia without iron overload is a rare biological anomaly defined as high serum ferritin levels without elevations of transferrin saturation, tissue or serum iron and characterized by an apparently asymptomatic clinical phenotype.","definition_xrefs":["Orphanet:254704"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic hyperferritinemia without iron overload (obsolete MONDO:0016788)","secondary_identifiers":["SCTID:766929007"],"synonyms":[{"name":"benign hyperferritinemia","type":"exact"}],"termid":"MONDO:0016788","xrefs":{"Monarch":{"xref_id":"0016788"}}}


id: PBO:0050077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemicentin 2","termid":"PBO:0050077"}


id: PBO:0067166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 219, pseudogene","termid":"PBO:0067166"}


id: GO:0051225
data:
  {"annotated_genes":["SJAG_00794","SJAG_01297","SJAG_02246","SJAG_04901","SJAG_07018","SJAG_00773","SJAG_02886","SJAG_01215","SJAG_03116","SJAG_02332","SJAG_01546","SJAG_02761","SJAG_04841","SJAG_04464","SJAG_02609","SJAG_01756","SJAG_01224","SJAG_02045","SJAG_03835","SJAG_03540","SJAG_04745","SJAG_00229","SJAG_02336","SJAG_03073","SJAG_03062","SJAG_01613","SJAG_00856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70975,78631,100410,106768,117490],"is_not":false,"summary":null,"term":"GO:0051225"},{"annotations":[95644,76116,78190],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[97100,95107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[99549,101755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[74374,97101,103365,99550],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[110895,109919,97202,118962,101309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[98951,100708,97614,104217,108576,100181,101760],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[99556,101761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[97615,99557,109170,95111,77543],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[111744],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[71909],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the spindle, the array of microtubules and associated molecules that serves to move duplicated chromosomes apart.","definition_xrefs":["GOC:tb","GOC:ai","GOC:mtg_sensu","GOC:expert_rg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"},{"relation_name":"part_of","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01756":null,"SJAG_02045":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051226","GO:0051227"],"synonyms":[{"name":"bipolar spindle biosynthesis","type":"exact"},{"name":"bipolar spindle formation","type":"exact"},{"name":"spindle biosynthesis","type":"exact"},{"name":"spindle formation","type":"exact"}],"termid":"GO:0051225","terms_by_termid":{"GO:0000073":null,"GO:0051225":null,"GO:0051256":null,"GO:0061804":null,"GO:0090306":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:0140642":null,"GO:1901673":null,"GO:1990810":null}}


id: GO:0000393
data:
  {"annotated_genes":["SJAG_01152","SJAG_01214","SJAG_02295","SJAG_01200","SJAG_04497","SJAG_00859","SJAG_01315","SJAG_01504","SJAG_02455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98341],"is_not":false,"summary":null,"term":"GO:0000393"},{"annotations":[106100,78275,58093],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000349"},{"annotations":[73487,109858,105171,77684],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[100957],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000388"}]},"cv_name":"biological_process","definition":"Structural rearrangements of the spliceosome complex, containing RNA to be spliced, to generate a catalytic conformation.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00859":null,"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01315":null,"SJAG_01504":null,"SJAG_02295":null,"SJAG_02455":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0010467","GO:0065003","GO:0044085","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"spliceosomal conformational changes to generate catalytic conformation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"}],"termid":"GO:0000393","terms_by_termid":{"GO:0000349":null,"GO:0000350":null,"GO:0000388":null,"GO:0000393":null}}


id: GO:0008947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Xaa-Yaa in which both Xaa and Yaa are Arg or Lys.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete omptin activity (obsolete GO:0008947)","synonyms":[{"name":"omptin activity","type":"exact"}],"termid":"GO:0008947"}


id: PBO:0082520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; involved in pheromone response, pseudohyphal/invasive growth, vacuole inheritance, down-regulation of sterol uptake; GBB motif binds Ste4p; member of the PAK (p21-activated kinase) family","termid":"PBO:0082520"}


id: PBO:0053669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 850","termid":"PBO:0053669"}


id: GO:0036226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of glucose.","definition_xrefs":["PMID:958201","GOC:mah","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to glucose starvation (obsolete GO:0036226)","synonyms":[{"name":"cell cycle arrest in response to glucose starvation","type":"broad"}],"termid":"GO:0036226"}


id: MONDO:0006840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilatation of the lymphatic vessels.","definition_xrefs":["NCIT:C97087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"vascular ectasia","termid":"MONDO:0021658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphangiectasis","secondary_identifiers":["MESH:D008200","UMLS:C0024214","EFO:1001025","MEDGEN:9827"],"synonyms":[{"name":"lymphangiectasia","type":"related"}],"termid":"MONDO:0006840","xrefs":{"Monarch":{"xref_id":"0006840"}}}


id: MONDO:0021223
data:
  {"annotated_genes":["SJAG_01082","SJAG_01620","SJAG_00980","SJAG_02226","SJAG_01837","SJAG_04699","SJAG_03453","SJAG_02261","SJAG_02049","SJAG_02426","SJAG_02231","SJAG_04206","SJAG_04394","SJAG_02187","SJAG_03920","SJAG_02748","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86831,86833,86836,86837,86832,86835,86834,87682,86830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[87398,87399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[87158,87159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"},{"annotations":[86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[86722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[86006,86007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the digestive system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_03920":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"is_obsolete":false,"name":"digestive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D005770","UMLS:C0012243","EFO:0008549","MEDGEN:8398","NCIT:C3052"],"synonyms":[{"name":"GI neoplasm","type":"exact"},{"name":"GI system neoplasm","type":"exact"},{"name":"GI system tumor","type":"exact"},{"name":"GI system tumour","type":"exact"},{"name":"GI tumor","type":"exact"},{"name":"GI tumour","type":"exact"},{"name":"digestive neoplasm","type":"exact"},{"name":"digestive system neoplasm (disease)","type":"exact"},{"name":"digestive system tumor","type":"exact"},{"name":"digestive system tumour","type":"exact"},{"name":"digestive tumor","type":"exact"},{"name":"digestive tumour","type":"exact"},{"name":"gastrointestinal neoplasm","type":"exact"},{"name":"gastrointestinal system neoplasm","type":"exact"},{"name":"gastrointestinal system tumor","type":"exact"},{"name":"gastrointestinal system tumour","type":"exact"},{"name":"gastrointestinal tumor","type":"exact"},{"name":"gastrointestinal tumour","type":"exact"},{"name":"neoplasm of GI system","type":"exact"},{"name":"neoplasm of digestive system","type":"exact"},{"name":"neoplasm of gastrointestinal system","type":"exact"},{"name":"neoplasm of the GI system","type":"exact"},{"name":"neoplasm of the digestive system","type":"exact"},{"name":"neoplasm of the gastrointestinal system","type":"exact"},{"name":"tumor of GI system","type":"exact"},{"name":"tumor of digestive system","type":"exact"},{"name":"tumor of gastrointestinal system","type":"exact"},{"name":"tumor of the GI system","type":"exact"},{"name":"tumor of the digestive system","type":"exact"},{"name":"tumor of the gastrointestinal system","type":"exact"},{"name":"tumour of GI system","type":"exact"},{"name":"tumour of digestive system","type":"exact"},{"name":"tumour of gastrointestinal system","type":"exact"},{"name":"tumour of the GI system","type":"exact"},{"name":"tumour of the digestive system","type":"exact"},{"name":"tumour of the gastrointestinal system","type":"exact"}],"termid":"MONDO:0021223","terms_by_termid":{"MONDO:0001056":null,"MONDO:0005575":null,"MONDO:0007256":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0011719":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0021223"}}}


id: FYPO:0001110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, normal morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, normal morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, normal morphology","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, normal morphology","type":"exact"}],"termid":"FYPO:0001110"}


id: PBO:0053881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1160","termid":"PBO:0053881"}


id: PBO:0046162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 2","termid":"PBO:0046162"}


id: PR:Q10088
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.09","synonyms":[{"name":"AUH 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC11D3.09","type":"exact"},{"name":"agmatine ureohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10088"}


id: SO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences that decrease interactions between biological regions, such as between a promoter, its 5' context and/or the translational unit(s) it regulates. Spacers can affect regulation of translation, transcription, and other biological processes.","definition_xrefs":["PMID:28422998","PMID:24933158","PMID:20843779","PMID:27034378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inert_DNA_spacer","secondary_identifiers":["doi:10.1101/584664"],"synonyms":[{"name":"Inert DNA Spacer","type":"related"}],"termid":"SO:0002223"}


id: PBO:0068402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 220","termid":"PBO:0068402"}


id: GO:0004123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cystathionine + H2O = 2-oxobutanoate + L-cysteine + NH4+.","definition_xrefs":["RHEA:14005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"cystathionine gamma-lyase activity","secondary_identifiers":["KEGG_REACTION:R01001","MetaCyc:RXN-15130","Reactome:R-HSA-1614583","GO:0016225"],"synonyms":[{"name":"L-cystathionine cysteine-lyase (deaminating)","type":"broad"},{"name":"L-cystathionine cysteine-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"gamma-cystathionase activity","type":"broad"},{"name":"homoserine deaminase activity","type":"related"},{"name":"homoserine deaminase-cystathionase activity","type":"related"},{"name":"homoserine dehydratase activity","type":"related"}],"termid":"GO:0004123"}


id: PATO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posterodistally.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodistal orientation","synonyms":[{"name":"postero-distal orientation","type":"exact"}],"termid":"PATO:0002527"}


id: GO:0042210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of octamethylcyclotetrasiloxane into dimethylsilanediol. The former is a tetramer of the latter.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic organosilicon metabolic process","termid":"GO:0018947"},{"relation_name":"is_a","term_name":"dimethylsilanediol metabolic process","termid":"GO:0046454"},{"relation_name":"is_a","term_name":"octamethylcyclotetrasiloxane catabolic process","termid":"GO:0046517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"octamethylcyclotetrasiloxane catabolic process to dimethylsilanediol","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"catabolic process of octamethylcyclotetrasiloxane to DMSD","type":"exact"},{"name":"catabolism of octamethylcyclotetrasiloxane to DMSD","type":"exact"},{"name":"octamethylcyclotetrasiloxane breakdown to dimethylsilanediol","type":"exact"},{"name":"octamethylcyclotetrasiloxane degradation to dimethylsilanediol","type":"exact"}],"termid":"GO:0042210"}


id: GO:0097675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Hrt3 in S. cerevisiae (Pof7 in S. pombe).","definition_xrefs":["GOC:jd","GOC:vw","PMID:14747994","PMID:15147268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Hrt3/Pof7 ubiquitin ligase complex","termid":"GO:0097675"}


id: PBO:0089175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S23","termid":"PBO:0089175"}


id: PBO:0109352
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(16)","termid":"PBO:0109352"}


id: GO:1900080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of arginine biosynthetic process","termid":"GO:1900079"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-arginine biosynthetic process","termid":"GO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of arginine biosynthetic process","synonyms":[{"name":"activation of arginine anabolism","type":"narrow"},{"name":"activation of arginine biosynthesis","type":"narrow"},{"name":"activation of arginine biosynthetic process","type":"narrow"},{"name":"activation of arginine formation","type":"narrow"},{"name":"activation of arginine synthesis","type":"narrow"},{"name":"positive regulation of arginine anabolism","type":"exact"},{"name":"positive regulation of arginine biosynthesis","type":"exact"},{"name":"positive regulation of arginine formation","type":"exact"},{"name":"positive regulation of arginine synthesis","type":"exact"},{"name":"up regulation of arginine anabolism","type":"exact"},{"name":"up regulation of arginine biosynthesis","type":"exact"},{"name":"up regulation of arginine biosynthetic process","type":"exact"},{"name":"up regulation of arginine formation","type":"exact"},{"name":"up regulation of arginine synthesis","type":"exact"},{"name":"up-regulation of arginine anabolism","type":"exact"},{"name":"up-regulation of arginine biosynthesis","type":"exact"},{"name":"up-regulation of arginine biosynthetic process","type":"exact"},{"name":"up-regulation of arginine formation","type":"exact"},{"name":"up-regulation of arginine synthesis","type":"exact"},{"name":"upregulation of arginine anabolism","type":"exact"},{"name":"upregulation of arginine biosynthesis","type":"exact"},{"name":"upregulation of arginine biosynthetic process","type":"exact"},{"name":"upregulation of arginine formation","type":"exact"},{"name":"upregulation of arginine synthesis","type":"exact"}],"termid":"GO:1900080"}


id: PBO:0013444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft3","termid":"PBO:0013444"}


id: FYPO:0002471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0002471"}


id: PBO:0053148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 4","termid":"PBO:0053148"}


id: MONDO:0007977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesomelic dysplasia Kantaputra type (MDK) is a rare skeletal disease characterized by symmetric shortening of the middle segments of limbs and short stature.","definition_xrefs":["Orphanet:1836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"mesomelic dysplasia","termid":"MONDO:0023599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dysplasia, Kantaputra type","secondary_identifiers":["UMLS:C1835009","SCTID:719397009","GARD:3074","MEDGEN:331880","OMIM:156232","MESH:C535547"],"synonyms":[{"name":"Kantaputra mesomelic dysplasia","type":"exact"},{"name":"MDK","type":"exact"},{"name":"MMDK","type":"related"},{"name":"Mdk","type":"related"},{"name":"mesomelic dysplasia Kantaputra type","type":"related"},{"name":"mesomelic dysplasia Thai type","type":"related"},{"name":"mesomelic dysplasia with ankle carpal and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia with ankle, carpal, and tarsal synostosis","type":"related"},{"name":"mesomelic dysplasia, Kantaputra type","type":"exact"},{"name":"mesomelic dysplasia, Thai type","type":"exact"}],"termid":"MONDO:0007977","xrefs":{"Monarch":{"xref_id":"0007977"}}}


id: RO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A parasite that kills or sterilizes its host","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasitoid_of","termid":"RO:0002208"}


id: GO:0015741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fumarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"fumarate transport","termid":"GO:0015741"}


id: FYPO:0001180
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0001180)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased tyrosine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0001180"}


id: PBO:0040854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S6 pseudogene 1","termid":"PBO:0040854"}


id: FYPO:0000603
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of G1 phase of a mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"decreased duration of mitotic cell cycle phase","termid":"FYPO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic G1 phase","synonyms":[{"name":"decreased duration of G1 phase during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: decreased duration","type":"related"},{"name":"reduced duration of mitotic G1 phase","type":"exact"}],"termid":"FYPO:0000603"}


id: GO:1990662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a S100A9 dimer and capable of binding to toll-like receptor 4 (TLR4) and the receptor for advanced glycation end products (RAGE) initiating signal transduction through NF-kappa-B pathways. Transports arachidonic acid between the cytosol and the NADPH oxidase complex at the plasma membrane in neutrophils as part of an inflammatory signal cascade leading to an oxidative burst. Complexes with microtubules to increase cell motility.","definition_xrefs":["GOC:bhm","PMID:15642721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"S100A9 complex","synonyms":[{"name":"S100A9 homodimer","type":"exact"}],"termid":"GO:1990662"}


id: GO:0071944
data:
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id: MONDO:0015864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor characterized by the presence of at least two different germ cell components. The different germ cell components include choriocarcinoma, embryonal carcinoma, yolk sac tumor, teratoma, and seminoma. It occurs in the ovary, testis, and extragonadal sites including central nervous system and mediastinum.","definition_xrefs":["NCIT:C4290"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed germ cell tumor","secondary_identifiers":["Orphanet:180234","ICDO:9085/3","UMLS:C0334524","DOID:3306","MEDGEN:87257","GARD:20202","NANDO:2200071"],"synonyms":[{"name":"combined germ cell neoplasm","type":"exact"},{"name":"combined germ cell tumor","type":"exact"},{"name":"combined germ cell tumour","type":"exact"},{"name":"mixed germ cell cancer","type":"exact"},{"name":"mixed germ cell neoplasm","type":"exact"},{"name":"mixed germ cell tumor","type":"exact"}],"termid":"MONDO:0015864","xrefs":{"Monarch":{"xref_id":"0015864"}}}


id: PBO:0065776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamylated RFamide peptide","termid":"PBO:0065776"}


id: GO:0033007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of mast cell activation","termid":"GO:0033004"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell activation involved in immune response","synonyms":[{"name":"negative regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033007"}


id: PBO:0052121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 antisense RNA 1","termid":"PBO:0052121"}


id: PBO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphate transferase subunits alpha and beta","termid":"PBO:0048846"}


id: MOD:01587
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(2-aminoethylphosphoryl)-L-serine.","definition_xrefs":["PubMed:16949362","PubMed:16825186","PubMed:15249686","RESID:AA0497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(2-aminoethylphosphoryl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-([(2-aminoethoxy)(hydroxy)phosphoryl]oxy)propanoic acid","type":"exact"},{"name":"MOD_RES O-(2-aminoethylphosphoryl)serine","type":"exact"},{"name":"O-(2-aminoethylphosphoryl)-L-serine","type":"exact"},{"name":"O3-(2-aminoethylphosphoryl)-L-serine","type":"exact"},{"name":"O3-(phosphoethanolamine)-L-serine","type":"exact"},{"name":"serine ethanolamine phosphate","type":"exact"},{"name":"serine ethanolamine phosphodiester","type":"exact"}],"termid":"MOD:01587"}


id: GO:0002147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a glucocorticoid receptor into the nucleus.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete glucocorticoid receptor import into nucleus (obsolete GO:0002147)","synonyms":[{"name":"glucocorticoid receptor nuclear translocation","type":"narrow"}],"termid":"GO:0002147"}


id: GO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002589"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen via MHC class I","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen via MHC class I","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002590"}


id: GO:0000349
data:
  {"annotated_genes":["SJAG_01504","SJAG_00859","SJAG_01315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58093,78275,106100],"is_not":false,"summary":null,"term":"GO:0000349"}]},"cv_name":"biological_process","definition":"Formation of a catalytic spliceosome complex ready to perform the first splicing reaction. This occurs by an ATP-dependent conformational change of the pre-catalytic spliceosome.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal conformational changes to generate catalytic conformation","termid":"GO:0000393"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00859":null,"SJAG_01315":null,"SJAG_01504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0016071","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"generation of catalytic spliceosome for first transesterification step","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000356","GO:0000357"],"synonyms":[{"name":"U12-type catalytic spliceosome formation for first transesterification step","type":"narrow"},{"name":"U2-type catalytic spliceosome formation for first transesterification step","type":"narrow"},{"name":"catalytic spliceosome assembly for first transesterification step","type":"related"},{"name":"formation of catalytic spliceosome for first transesterification step","type":"exact"},{"name":"spliceosomal A2-2 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-2 complex formation","type":"narrow"},{"name":"spliceosomal C1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal C1 complex formation","type":"narrow"}],"termid":"GO:0000349","terms_by_termid":{"GO:0000349":null}}


