# terms

id: PBO:0067011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 19, pseudogene","termid":"PBO:0067011"}


id: GO:0034719
data:
  {"annotated_genes":["SJAG_01301","SJAG_01870","SJAG_03894","SJAG_01217","SJAG_00147","SJAG_03323","SJAG_05195"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77056,77454,79682],"is_not":false,"summary":null,"term":"GO:0034719"},{"annotations":[104870,96310,101626,109298],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032797"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of several methylated Sm proteins with the SMN complex; the latter contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and unrip proteins; additional proteins, including galectin-1 and galectin-3, are also found in the SMN-SM complex. The SMN-Sm complex is involved in spliceosomal snRNP assembly in the cytoplasm.","definition_xrefs":["PMID:17401408","PMID:11522829","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_01217":null,"SJAG_01301":null,"SJAG_01870":null,"SJAG_03323":null,"SJAG_03894":null,"SJAG_05195":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"SMN-Sm protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034719","terms_by_termid":{"GO:0032797":null,"GO:0034719":null}}


id: MONDO:0006103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sporadic or familial pheochromocytoma that is confined to the adrenal gland and does not have any metastatic potential. The majority of cases are sporadic, and usually unilateral. Familial cases are usually bilateral.","definition_xrefs":["NCIT:C48305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland pheochromocytoma","termid":"MONDO:0004974"},{"relation_name":"is_a","term_name":"benign neoplasm of adrenal medulla","termid":"MONDO:0021468"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign adrenal gland pheochromocytoma","secondary_identifiers":["UMLS:C1706920","MEDGEN:317403","EFO:1000106"],"synonyms":[{"name":"adrenal gland pheochromocytoma, benign","type":"exact"},{"name":"benign adrenal gland pheochromocytoma","type":"exact"},{"name":"pheochromocytoma, benign","type":"exact"}],"termid":"MONDO:0006103","xrefs":{"Monarch":{"xref_id":"0006103"}}}


id: GO:0050193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose 5-phosphate + phosphate = acetyl phosphate + D-glyceraldehyde 3-phosphate + H2O.","definition_xrefs":["MetaCyc:PHOSPHOKETOLASE-RXN","EC:4.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphoketolase activity","secondary_identifiers":["RHEA:10468"],"synonyms":[{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (adding phosphate; acetyl-phosphate-forming)","type":"related"},{"name":"D-xylulose-5-phosphate D-glyceraldehyde-3-phosphate-lyase (phosphate-acetylating) activity","type":"related"},{"name":"xylulose-5-phosphate phosphoketolase activity","type":"related"}],"termid":"GO:0050193"}


id: MONDO:0957341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"secondary early-onset glaucoma","secondary_identifiers":["GARD:22111","MEDGEN:1843268","Orphanet:519331","UMLS:C5681353"],"termid":"MONDO:0957341","xrefs":{"Monarch":{"xref_id":"0957341"}}}


id: PBO:0060606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 2","termid":"PBO:0060606"}


id: GO:0097596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A partial left-handed spiral array of microtubules that lies generally dorsal to the main ventral disc microtubule array in Giardia species (trophozoite stage).","definition_xrefs":["GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc supernumerary microtubule array","synonyms":[{"name":"supernumerary microtubule array","type":"broad"},{"name":"ventral disk supernumerary microtubule array","type":"related"}],"termid":"GO:0097596"}


id: MONDO:0025082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation of animals with parasitic worms of the helminth class. The infestation may be experimental or veterinary.","definition_xrefs":["MESH:D006374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic disease, non-human animal","termid":"MONDO:0024969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helminthiasis, animal","synonyms":[{"name":"Helminthiases, animal","type":"related"},{"name":"animal Helminthiases","type":"related"},{"name":"animal helminthiasis","type":"related"}],"termid":"MONDO:0025082","xrefs":{"Monarch":{"xref_id":"0025082"}}}


id: MONDO:0700123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Variants in SMARCC1 cause a novel human syndrome characterized by developmental delay, cerebral ventriculomegaly and aqueductal stenosis, and other associated structural brain and cardiac defects.","direct_ancestors":[{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCC1-associated developmental dysgenesis syndrome","synonyms":[{"name":"SMARCC1-related BAFopathy","type":"exact"}],"termid":"MONDO:0700123","xrefs":{"Monarch":{"xref_id":"0700123"}}}


id: PBO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid associated differentiation marker","termid":"PBO:0060228"}


id: GO:0003922
data:
  {"annotated_genes":["SJAG_00964","SJAG_04634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93769],"is_not":false,"summary":null,"term":"GO:0003922"},{"annotations":[75079],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate + 2H+.","definition_xrefs":["RHEA:11680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GMP synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.5.2","Reactome:R-HSA-73792","Wikipedia:GMP_synthase_(glutamine-hydrolysing)","MetaCyc:GMP-SYN-GLUT-RXN","Reactome:R-HSA-9748957"],"synonyms":[{"name":"GMP synthase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"glutamine amidotransferase activity","type":"related"},{"name":"guanosine 5'-monophosphate synthetase activity","type":"related"},{"name":"guanosine monophosphate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"guanylate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"xanthosine 5'-phosphate amidotransferase activity","type":"related"},{"name":"xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)","type":"related"}],"termid":"GO:0003922","terms_by_termid":{"GO:0003921":null,"GO:0003922":null}}


id: GO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving vitellogenin, and delivering vitellogenin into the cell via endocytosis.","definition_xrefs":["GOC:bf","PMID:12429745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"vitellogenin receptor activity","termid":"GO:0008196"}


id: GO:0140632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inflammasome complex.","definition_xrefs":["PMID:33542150","PMID:33420028","PMID:33420033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"canonical inflammasome complex assembly","termid":"GO:0140632"}


id: PBO:0112984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accessory subunit of DNA polymerase zeta (pol zeta); involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev3p, Pol31p and Pol32p","termid":"PBO:0112984"}


id: GO:0047814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + ATP = D-arabinose 5-phosphate + ADP.","definition_xrefs":["RHEA:24588","EC:2.7.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"D-arabinokinase activity","secondary_identifiers":["MetaCyc:D-ARABINOKINASE-RXN","KEGG_REACTION:R01573"],"synonyms":[{"name":"ATP:D-arabinose 5-phosphotransferase activity","type":"related"},{"name":"D-arabinokinase (phosphorylating)","type":"related"}],"termid":"GO:0047814"}


id: MONDO:0032899
data:
  {"annotated_genes":["SJAG_03684"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87041],"is_not":false,"summary":null,"term":"MONDO:0032899"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital neutropenia","termid":"MONDO:0018542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia, severe congenital, 8, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618752","Orphanet:675767","UMLS:C5203411","DOID:0112135","GARD:16375","MEDGEN:1684816"],"synonyms":[{"name":"NEUTROPENIA, SEVERE CONGENITAL, 8, AUTOSOMAL DOMINANT","type":"related"},{"name":"Neutropenia, Severe Congenital, 8, Autosomal Dominant, With or Without Pancreatic Dysfunction And/Or Neurologic Abnormalities","type":"related"},{"name":"SCN8","type":"related"},{"name":"Shwachman-Diamond Syndrome-Like","type":"related"}],"termid":"MONDO:0032899","terms_by_termid":{"MONDO:0032899":null},"xrefs":{"Monarch":{"xref_id":"0032899"}}}


id: GO:1990025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Synaptic bouton found in the ventral horn of the spinal cord. F boutons range in diameter from 0.5 to 7 um and contain flattened or pleomorphic synaptic vesicles.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"F bouton","termid":"GO:1990025"}


id: GO:0038024
data:
  {"annotated_genes":["SJAG_04569","SJAG_03976","SJAG_00785","SJAG_02120"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113615,114061],"is_not":false,"summary":null,"term":"GO:0038024"},{"annotations":[77340,119104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097020"}]},"cv_name":"molecular_function","definition":"Binding specifically to a substance (cargo) to deliver it to a transport vesicle. Cargo receptors span membranes (for instance the plasma membrane or the endoplasmic reticulum membrane), binding simultaneously to cargo molecules and coat adaptors, to efficiently recruit the cargo molecules to nascent vesicles.","definition_xrefs":["PMID:15239958","PMID:27903609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00785":null,"SJAG_02120":null,"SJAG_03976":null,"SJAG_04569":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"cargo receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9759209","Reactome:R-HSA-203716","Reactome:R-HSA-3000103","Reactome:R-HSA-3000137","Reactome:R-HSA-3000122","Reactome:R-HSA-3000112","Reactome:R-HSA-350168","Reactome:R-HSA-9759202"],"synonyms":[{"name":"endocytic receptor activity","type":"narrow"},{"name":"receptor activity","type":"broad"},{"name":"receptor activity involved in receptor-mediated endocytosis","type":"narrow"},{"name":"transport receptor activity","type":"broad"}],"termid":"GO:0038024","terms_by_termid":{"GO:0038024":null,"GO:0097020":null}}


id: MONDO:0011317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, severe, with skeletal anomalies including posterior rib-Gap defects","secondary_identifiers":["MEDGEN:400408","OMIM:603394","UMLS:C1863919","MESH:C566377"],"synonyms":[{"name":"microcephaly, severe, with skeletal anomalies including posterior rib-Gap defects","type":"exact"}],"termid":"MONDO:0011317","xrefs":{"Monarch":{"xref_id":"0011317"}}}


id: GO:0044445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of cytosol, that part of the cytoplasm that does not contain membranous or particulate subcellular components.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic part (obsolete GO:0044445)","synonyms":[{"name":"cytosol component","type":"exact"}],"termid":"GO:0044445"}


id: PBO:0073240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1 pseudogene 4","termid":"PBO:0073240"}


id: PBO:0054223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1605","termid":"PBO:0054223"}


id: PBO:0053119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 9","termid":"PBO:0053119"}


id: GO:0033409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"UAU codon-amino acid adaptor activity","synonyms":[{"name":"TAT codon-amino acid adaptor activity","type":"exact"},{"name":"tyrosine tRNA","type":"related"}],"termid":"GO:0033409"}


id: PBO:0039470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD17 divergent transcript","termid":"PBO:0039470"}


id: PBO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-26 (pseudogene)","termid":"PBO:0051441"}


id: PBO:0087006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Riboflavin kinase, produces riboflavin monophosphate (FMN); FMN is a necessary cofactor for many enzymes; predominantly localizes to the microsomal fraction and also found in the mitochondrial inner membrane; human RFK functionally complements the lethality of the null mutation","termid":"PBO:0087006"}


id: GO:0031704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apelin receptor.","definition_xrefs":["GOC:mah","GOC:nln","GOC:vp","PMID:12787050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"apelin receptor binding","secondary_identifiers":["GO:0042569"],"synonyms":[{"name":"APJ receptor binding","type":"exact"},{"name":"apelin receptor ligand","type":"narrow"}],"termid":"GO:0031704"}


id: PBO:0109547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit Csc2","termid":"PBO:0109547"}


id: PBO:0076623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor E","termid":"PBO:0076623"}


id: PBO:0031263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_mitotic_DNA_replication_fork_barriers","termid":"PBO:0031263"}


id: PBO:0077432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167B","termid":"PBO:0077432"}


id: PBO:0029478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cerulenin","termid":"PBO:0029478"}


id: FYPO:0004223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K20 monomethylation during vegetative growth","synonyms":[{"name":"increased histone H4-K20 monomethylation during mitotic cell cycle","type":"related"},{"name":"increased histone H4K20 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H4K20me1 during vegetative growth","type":"exact"},{"name":"increased histone lysine H4-K20 monomethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004223"}


id: GO:0006559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenylalanine, 2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-phenylalanine metabolic process","termid":"GO:0006558"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-phenylalanine catabolic process","synonyms":[{"name":"L-phenylalanine breakdown","type":"exact"},{"name":"L-phenylalanine catabolism","type":"exact"},{"name":"L-phenylalanine degradation","type":"exact"},{"name":"phenylalanine catabolic process","type":"broad"},{"name":"phenylalanine catabolism","type":"broad"}],"termid":"GO:0006559"}


id: PBO:0045655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox B","termid":"PBO:0045655"}


id: MONDO:0800345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 17","secondary_identifiers":["MEDGEN:861997","UMLS:C4013560"],"synonyms":[{"name":"ATFB17","type":"exact"}],"termid":"MONDO:0800345","xrefs":{"Monarch":{"xref_id":"0800345"}}}


id: GO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deoxynucleotide, a deoxyribonucleoside in ester linkage to phosphate, commonly at the 5' position of deoxyribose, into, out of or within a cell.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"deoxynucleotide transport","termid":"GO:0030302"}


id: GO:0050640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + isopenicillin N + H2O = CoA + penicillin G + L-2-aminoadipate.","definition_xrefs":["RHEA:20720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isopenicillin-N N-acyltransferase activity","secondary_identifiers":["GO:0042319","GO:0045440","EC:2.3.1.164","MetaCyc:2.3.1.164-RXN"],"synonyms":[{"name":"acyl-CoA:isopenicillin N N-acyltransferase activity","type":"related"},{"name":"acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase activity","type":"related"},{"name":"acyl-coenzyme A:isopenicillin N acyltransferase activity","type":"related"},{"name":"isopenicillin N:acyl-CoA acyltransferase activity","type":"related"},{"name":"isopenicillin-N acyltransferase activity","type":"exact"}],"termid":"GO:0050640"}


id: GO:0043821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + propionyl-CoA = succinyl-CoA + propionate.","definition_xrefs":["PMID:10769117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016782"],"is_obsolete":false,"name":"propionyl-CoA:succinate CoA-transferase activity","secondary_identifiers":["MetaCyc:RXN0-268","RHEA:28010"],"synonyms":[{"name":"propionyl-CoA succinate CoA-transferase activity","type":"exact"},{"name":"propionyl-CoA:succinate CoA transferase activity","type":"exact"}],"termid":"GO:0043821"}


id: PBO:0056631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 11","termid":"PBO:0056631"}


id: FYPO:0007335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at centromere inner repeat regions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere","termid":"FYPO:0000146"},{"relation_name":"is_a","term_name":"abolished chromatin silencing","termid":"FYPO:0007333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished chromatin silencing at centromere inner repeat","synonyms":[{"name":"abolished chromatin silencing at centromere imr","type":"exact"},{"name":"abolished chromatin silencing at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished chromatin silencing at centromeric inner repeat region","type":"exact"},{"name":"abolished heterochromatin silencing at centromere inner repeat","type":"exact"},{"name":"chromatin silencing at centromere inner repeatabolished","type":"exact"}],"termid":"FYPO:0007335"}


id: PBO:0039454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 2","termid":"PBO:0039454"}


id: PBO:0039473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 18C, pseudogene","termid":"PBO:0039473"}


id: PATO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing chromosomes derived from a single species.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Autopolyploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autopolyploid","termid":"PATO:0001378"}


id: GO:0043670
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of the ectexine.","definition_xrefs":["PMID:28904424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ectexine","termid":"GO:0043669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"foot layer","synonyms":[{"name":"nexine 1","type":"exact"}],"termid":"GO:0043670"}


id: GO:0045809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of competence for transformation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of competence for transformation","termid":"GO:0045304"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"establishment of competence for transformation","termid":"GO:0030420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of competence for transformation","synonyms":[{"name":"activation of establishment of competence for transformation","type":"narrow"},{"name":"activator of the establishment of competence for transformation activity","type":"related"},{"name":"stimulation of establishment of competence for transformation","type":"narrow"},{"name":"up regulation of establishment of competence for transformation","type":"exact"},{"name":"up-regulation of establishment of competence for transformation","type":"exact"},{"name":"upregulation of establishment of competence for transformation","type":"exact"}],"termid":"GO:0045809"}


id: GO:1990782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein tyrosine kinase.","definition_xrefs":["PMID:25499537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein tyrosine kinase binding","synonyms":[{"name":"tyrosine kinase binding","type":"exact"}],"termid":"GO:1990782"}


id: MONDO:0021227
data:
  {"annotated_genes":["SJAG_01895","SJAG_02398","SJAG_00260","SJAG_01671","SJAG_03429","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[86197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the adrenal gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03429":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"adrenal gland neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0001624","EFO:0003850","MEDGEN:1352","GARD:19765","ONCOTREE:ADRENALGLAND","NCIT:C2859","Orphanet:100091"],"synonyms":[{"name":"ADRENALGLAND","type":"related"},{"name":"adrenal gland neoplasm (disease)","type":"exact"},{"name":"adrenal gland tumor","type":"exact"},{"name":"adrenal gland tumour","type":"exact"},{"name":"adrenal neoplasm","type":"exact"},{"name":"adrenal neoplasms","type":"exact"},{"name":"adrenal tumor","type":"exact"},{"name":"adrenal tumour","type":"exact"},{"name":"adrenal/paraganglial tumor","type":"related"},{"name":"adrenal/paraganglial tumour","type":"related"},{"name":"neoplasm of adrenal gland","type":"exact"},{"name":"neoplasm of the adrenal gland","type":"exact"},{"name":"tumor of adrenal gland","type":"exact"},{"name":"tumor of the adrenal gland","type":"exact"},{"name":"tumour of adrenal gland","type":"exact"},{"name":"tumour of the adrenal gland","type":"exact"}],"termid":"MONDO:0021227","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0009050":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0021227"}}}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: GO:0033915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2) and (1->3) linkages in mannan, releasing mannose.","definition_xrefs":["EC:3.2.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"mannan 1,2-(1,3)-alpha-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.77-RXN"],"synonyms":[{"name":"1,2-1,3-alpha-D-mannan mannohydrolase activity","type":"related"},{"name":"exo-1,2-1,3-alpha-mannosidase activity","type":"related"}],"termid":"GO:0033915"}


id: PATO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which lacks pattern.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular density","termid":"PATO:0002141"}


id: FYPO:0007601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased, and the protein is instead visible diffusely localized in the cytoplasm.","definition_xrefs":["PMID:33138913","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitochondrion","termid":"FYPO:0007038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","synonyms":[{"name":"decreased protein localisation to mitochondrion, with diffuse cytoplasmic protein mislocalisation","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic localization","type":"exact"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitochondrion, with diffuse cytoplasmic protein mislocalization","type":"exact"}],"termid":"FYPO:0007601"}


id: PBO:0052282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM7A divergent transcript","termid":"PBO:0052282"}


id: GO:0016971
data:
  {"annotated_genes":["SJAG_03992","SJAG_01647"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58108,64700],"is_not":false,"summary":null,"term":"GO:0016971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-dithiol + O2 = [protein]-disulfide + H2O2 using FAD as a cofactor, leading to formation of disulfide bridges in proteins.","definition_xrefs":["PMID:10899311","PMID:35495482","PMID:19679655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-disulfide reductase activity","termid":"GO:0015035"},{"relation_name":"is_a","term_name":"thiol oxidase activity","termid":"GO:0016972"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01647":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016491","GO:0015036","GO:0003824"],"is_obsolete":false,"name":"flavin-dependent sulfhydryl oxidase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["RHEA:59116"],"synonyms":[{"name":"flavin-linked sulfhydryl oxidase activity","type":"exact"}],"termid":"GO:0016971","terms_by_termid":{"GO:0016971":null}}


id: GO:0061909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which autophagosomes, double-membraned vesicles containing cytoplasmic material, fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the autophagosome.","definition_xrefs":["PMID:28077293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006914","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"autophagosome-lysosome fusion","synonyms":[{"name":"autophagosome fusion","type":"broad"},{"name":"autophagosome-vacuole fusion","type":"exact"}],"termid":"GO:0061909"}


id: PBO:0080526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAS protein family homolog 8, pseudogene","termid":"PBO:0080526"}


id: PBO:0088916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ lysophospholipase fusion protein Dfr1","termid":"PBO:0088916"}


id: GO:0099554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of gaseous molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}


id: MONDO:0005009
data:
  {"annotated_genes":["SJAG_04757","SJAG_03866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86986,86987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.","definition_xrefs":["NCIT:C3080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congestive heart failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:6000","EFO:0000373","ICD9:404.13","icd11.foundation:2136808878","ICD9:428.0","ICD9:404.11","ICD9:428.9","ICD9:428","SCTID:42343007","UMLS:C0018802","MEDGEN:9169","ICD9:404.01"],"synonyms":[{"name":"CHF","type":"exact"},{"name":"cardiac failure, congestive","type":"exact"},{"name":"congestive heart disease","type":"exact"},{"name":"failure, congestive heart","type":"exact"},{"name":"heart failure, congestive","type":"exact"},{"name":"weak heart","type":"exact"}],"termid":"MONDO:0005009","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0005009"}}}


id: PR:Q9P6S6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pga2 gene.","definition_xrefs":["UniProtKB:Q9P6S6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGA2-homolog C27.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.01c","synonyms":[{"name":"Spom972h-pga2","type":"exact"}],"termid":"PR:Q9P6S6"}


id: GO:0005921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of pannexins or innexins and connexins, two different families of channel-forming proteins.","definition_xrefs":["PMID:22366062","Wikipedia:Gap_junction","ISBN:0815332181","GOC:mah","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"gap junction","secondary_identifiers":["NIF_Subcellular:sao118541872"],"synonyms":[{"name":"communicating junction","type":"exact"},{"name":"electrical synapse","type":"related"},{"name":"electrotonic synapse","type":"related"},{"name":"gap junction macula","type":"exact"},{"name":"gap junction plaque","type":"exact"},{"name":"intercellular gap junction channel","type":"related"},{"name":"macula communicans","type":"exact"},{"name":"zonula communicans","type":"exact"}],"termid":"GO:0005921"}


id: GO:0070661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a leukocyte population by cell division.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte proliferation","termid":"GO:0070661"}


id: MONDO:1010170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Krabbe disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"leukodystrophy, non-human animal","termid":"MONDO:1010238"},{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Krabbe disease, non-human animal","secondary_identifiers":["OMIA:000578"],"termid":"MONDO:1010170","xrefs":{"Monarch":{"xref_id":"1010170"}}}


id: MONDO:0010529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of spinocerebellar degeneration characterized by onset in infancy of hypotonia, ataxia, sensorineural deafness, developmental delay, esotropia, and optic atrophy, and by a progressive course leading to death in childhood. It has been described one family with at least six affected males from five different sibships (connected through carrier females). It is transmitted as an X-linked recessive trait.","definition_xrefs":["Orphanet:85297"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked spinocerebellar ataxia type 3","secondary_identifiers":["MEDGEN:337124","MESH:C537315","UMLS:C1844936","GARD:9981","OMIM:301790","DOID:0111831","SCTID:719817002","icd11.foundation:261426817"],"synonyms":[{"name":"SCAX3","type":"exact"},{"name":"Scax3","type":"related"},{"name":"X-linked ataxia-deafness syndrome","type":"exact"},{"name":"ataxia-deafness syndrome X-linked","type":"related"},{"name":"ataxia-deafness syndrome, X-linked","type":"related"},{"name":"spinocerebellar ataxia X-linked type 3","type":"related"},{"name":"spinocerebellar ataxia, X-linked 3","type":"related"},{"name":"spinocerebellar ataxia, X-linked type 3","type":"exact"}],"termid":"MONDO:0010529","xrefs":{"Monarch":{"xref_id":"0010529"}}}


id: FYPO:0005164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which non-sporulating diploid cells become haploid, without undergoing meiosis, at a higher frequency than normal during a cellular response to ultraviolet light.","definition_xrefs":["PMID:7254221","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased haploidization","termid":"FYPO:0001386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased haploidization during cellular response to UV","synonyms":[{"name":"increased haploidisation during cellular response to UV","type":"exact"},{"name":"increased haploidization during cellular response to ultraviolet light","type":"exact"},{"name":"unstable diploid during cellular response to UV","type":"exact"}],"termid":"FYPO:0005164"}


id: GO:0031556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of transcriptional regulation at the level of early termination. This process can occur only in prokaryotes, where transcription of an operon into messenger RNA and translation of that mRNA into polypeptides occur simultaneously. The general principle is that alternative mRNA secondary structures occur under different physiological conditions such as available amount of a particular amino acid. One set of conditions favors early termination of transcription. In the classic example of the trp biosynthesis operon, translation of the gene for a short, trp-containing polypeptide called the trp operon leader peptide pauses either at a trp codon (if tryptophan is scarce) or the stop codon (if trp is readily available). In the former situation transcription continues, but in the latter a Rho-independent terminator forms and reduces, or attenuates, expression of the tryptophan biosynthesis genes. Although the polypeptides encoded by leader peptide genes appear not to be stable once their translation is complete, it is suggested by recent studies that their nascent polypeptide chains interact specifically with ribosomes, specific uncharged tRNAs, or other cellular components to inhibit release at the stop codon and improve the function of transcriptional attenuation as a regulatory switch.","definition_xrefs":["GOC:dh","ISBN:0198542682","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional attenuation","termid":"GO:0031555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcriptional attenuation by ribosome","synonyms":[{"name":"ribosome-mediated transcriptional attenuation","type":"exact"}],"termid":"GO:0031556"}


id: PR:Q09854
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mok11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase mok11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.01","synonyms":[{"name":"Spom972h-mok11","type":"exact"}],"termid":"PR:Q09854"}


id: PBO:0055708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 2 like","termid":"PBO:0055708"}


id: GO:0102848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:2-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102848)","termid":"GO:0102848"}


id: GO:0015988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane and against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}


id: GO:0060608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell along the edges of two epithelial folds, giving rise to the lumen of the neural tube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion involved in sealing an epithelial fold","termid":"GO:0060607"},{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in neural tube closure","termid":"GO:0060608"}


id: MOD:01237
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal.","definition_xrefs":["PubMed:9629898","PubMed:11327326","PubMed:15133838","Unimod:53#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"4-hydroxynonenal (HNE)","type":"related"},{"name":"HNE","type":"related"}],"termid":"MOD:01237"}


id: PBO:0036252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl phosphate reductase Pro1","termid":"PBO:0036252"}


id: PBO:0047742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 5","termid":"PBO:0047742"}


id: FYPO:0006600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during mitotic metaphase","termid":"FYPO:0003002"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during mitotic metaphase","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during mitotic metaphase","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during metaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during metaphase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006600"}


id: GO:1900456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invasive growth in response to glucose limitation by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:12024013","PMID:16568252","PMID:10591965","PMID:8710886","GOC:TermGenie","PMID:9987114","GOC:dgf","PMID:10373537","PMID:15466424","PMID:9811878"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900456)","synonyms":[{"name":"regulation of colony morphology by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of invasive growth in response to glucose limitation by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900456"}


id: GO:0003840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (5-L-glutamyl)-peptide + an amino acid = peptide + 5-L-glutamyl-amino acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-glutamyltransferase activity (obsolete GO:0003840)","termid":"GO:0003840"}


id: PBO:0055292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2719","termid":"PBO:0055292"}


id: PBO:0045584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 6","termid":"PBO:0045584"}


id: PBO:0081030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11B","termid":"PBO:0081030"}


id: RO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of endoparasite-of in which the parasite inhabits host cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"endoparasite_of","termid":"RO:0002634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular_endoparasite_of","termid":"RO:0002640"}


id: MONDO:0021907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aplasia cutis with autosomal recessive inheritance.","definition_xrefs":["PMID:3906608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aplasia cutis congenita","termid":"MONDO:0007145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"aplasia cutis autosomal recessive","secondary_identifiers":["GARD:749"],"termid":"MONDO:0021907","xrefs":{"Monarch":{"xref_id":"0021907"}}}


id: PATO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased position","termid":"PATO:0001475"},{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased angle to","termid":"PATO:0002327"}


id: PBO:0049587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 5, pseudogene","termid":"PBO:0049587"}


id: MONDO:0017107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated cerebellar vermis agenesis","secondary_identifiers":["UMLS:C5680776","GARD:20990","Orphanet:269203","MEDGEN:1814464"],"termid":"MONDO:0017107","xrefs":{"Monarch":{"xref_id":"0017107"}}}


id: GO:0048164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antral spaces become distinct and the first polar body forms.","definition_xrefs":["ISBN:0198542771","GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distinct antral spaces stage","synonyms":[{"name":"mammalian oogenesis stage 7","type":"exact"}],"termid":"GO:0048164"}


id: PBO:0084203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction resolvase; promotes template switching during break-induced replication (BIR), causing non-reciprocal translocations (NRTs); localization is cell-cycle dependent and regulated by Cdc28p phosphorylation; homolog of human GEN1; similar to S. cerevisiae endonuclease Rth1p","termid":"PBO:0084203"}


id: GO:0052626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + L-glutamate + ATP = N-benzoyl-L-glutamate + AMP + diphosphate + H+.","definition_xrefs":["PMID:19189963","MetaCyc:RXN-10886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-benzoyl-L-glutamate synthetase activity","synonyms":[{"name":"benzoate amino acid synthetase activity","type":"broad"},{"name":"benzoyl amino acid synthetase activity","type":"exact"}],"termid":"GO:0052626"}


id: GO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basophil mediated immunity","termid":"GO:0002560"},{"relation_name":"is_a","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I hypersensitivity mediated by basophils","termid":"GO:0002559"}


id: PBO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VC","termid":"PBO:0060339"}


id: MONDO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.","definition_xrefs":["NCIT:C2970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic carcinoma","secondary_identifiers":["UMLS:C0010606","MEDGEN:41382","MESH:D003528","EFO:0000231","GARD:5743","DOID:0080202","icd11.foundation:2127202862","ONCOTREE:ACYC","ICDO:8200/3"],"synonyms":[{"name":"adenocystic carcinoma","type":"exact"},{"name":"adenoid cystic cancer","type":"exact"},{"name":"adenoid cystic carcinoma","type":"exact"},{"name":"cribriform carcinoma","type":"related"},{"name":"cylindroid adenocarcinoma","type":"exact"},{"name":"cylindroma","type":"related"}],"termid":"MONDO:0004971","xrefs":{"Monarch":{"xref_id":"0004971"}}}


id: GO:0002547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the tissue kallikrein-kinin cascade.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of kinin cascade","termid":"GO:0002258"},{"relation_name":"is_a","term_name":"regulation of tissue kallikrein-kinin cascade","termid":"GO:0002382"},{"relation_name":"positively_regulates","term_name":"tissue kallikrein-kinin cascade","termid":"GO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"positive regulation of tissue kallikrein-kinin cascade","synonyms":[{"name":"activation of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"positive regulation of glandular kallikrein-kinin cascade","type":"exact"},{"name":"stimulation of tissue kallikrein-kinin cascade","type":"narrow"},{"name":"up regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"up-regulation of tissue kallikrein-kinin cascade","type":"exact"},{"name":"upregulation of tissue kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002547"}


id: MONDO:0013708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 25","secondary_identifiers":["GARD:22561","MEDGEN:482174","OMIM:614346","UMLS:C3280544","DOID:0081198"],"synonyms":[{"name":"MRT25","type":"exact"},{"name":"intellectual disability, autosomal recessive 25","type":"exact"},{"name":"mental retardation, autosomal recessive 25","type":"related"}],"termid":"MONDO:0013708","xrefs":{"Monarch":{"xref_id":"0013708"}}}


id: GO:0044479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts mast cell degranulation in another organism via the action of a venom.","definition_xrefs":["GOC:jl","PMID:21549739","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of mast cell degranulation","synonyms":[{"name":"envenomation resulting in modulation of mast cell degranulation in another organism","type":"exact"},{"name":"envenomation resulting in modulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0044479"}


id: GO:0034307
data:
  {"annotated_genes":["SJAG_04853","SJAG_04140","SJAG_02169","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92528],"is_not":false,"summary":null,"term":"GO:0034307"},{"annotations":[111508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[102607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[91067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ascospore formation. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043940"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030437","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAPKKK cascade during sporulation","type":"related"}],"termid":"GO:0034307","terms_by_termid":{"GO:0034307":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: FYPO:0001652
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during nitrogen starvation","termid":"FYPO:0001648"},{"relation_name":"is_a","term_name":"abnormal lysine import","termid":"FYPO:0001651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal lysine import during nitrogen starvation","synonyms":[{"name":"abnormal L-lysine import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"abnormal L-lysine import during nitrogen starvation","type":"exact"},{"name":"abnormal lysine import during nitrogen depletion","type":"exact"},{"name":"abnormal lysine import during nitrogen deprivation","type":"exact"},{"name":"abnormal lysine import into cell during nitrogen starvation","type":"exact"},{"name":"abnormal lysine uptake during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001652"}


id: MONDO:0020226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","secondary_identifiers":["Orphanet:98642"],"termid":"MONDO:0020226","xrefs":{"Monarch":{"xref_id":"0020226"}}}


id: GO:1905953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lipid localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17564681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"negatively_regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid localization","synonyms":[{"name":"down regulation of lipid localisation","type":"exact"},{"name":"down regulation of lipid localization","type":"exact"},{"name":"down-regulation of lipid localisation","type":"exact"},{"name":"down-regulation of lipid localization","type":"exact"},{"name":"downregulation of lipid localisation","type":"exact"},{"name":"downregulation of lipid localization","type":"exact"},{"name":"inhibition of lipid localisation","type":"narrow"},{"name":"inhibition of lipid localization","type":"narrow"},{"name":"negative regulation of lipid localisation","type":"exact"}],"termid":"GO:1905953"}


id: PBO:0012310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase (predicted)","termid":"PBO:0012310"}


id: MONDO:0020752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonic epilepsy, juvenile, susceptibility to, 1","secondary_identifiers":["MEDGEN:342587","UMLS:C1850778"],"synonyms":[{"name":"EJM1","type":"exact"}],"termid":"MONDO:0020752","xrefs":{"Monarch":{"xref_id":"0020752"}}}


id: GO:0008573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. ATP hydrolysis to import and assemble peroxisome components into the organelle.","definition_xrefs":["EC:3.6.4.7"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome-assembly ATPase activity (obsolete GO:0008573)","synonyms":[{"name":"peroxisome-assembly ATPase activity","type":"exact"}],"termid":"GO:0008573"}


id: PBO:0091442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal protein Rrg8","termid":"PBO:0091442"}


id: PBO:0066513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X associated ankyrin containing protein","termid":"PBO:0066513"}


id: FYPO:0006724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which movement of a protein away from Cdr2 medial cortical node complexes during a cellular response to osmotic stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:28924043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress","synonyms":[{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein exit from Cdr2 medial cortical node complex during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0006724"}


id: PBO:0000557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb4 (predicted)","termid":"PBO:0000557"}


id: GO:0061226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron in the mesonephros. The proximal/distal axis is defined by a line that runs from the glomerulus (proximal end) outward toward the mesonephric duct (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"mesonephric nephron development","termid":"GO:0061215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in mesonephric nephron development","termid":"GO:0061226"}


id: GO:0051885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of anagen, the growth phase of the hair cycle.","definition_xrefs":["GOC:ai","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of anagen","termid":"GO:0051884"},{"relation_name":"positively_regulates","term_name":"anagen","termid":"GO:0042640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of anagen","synonyms":[{"name":"activation of anagen","type":"narrow"},{"name":"positive regulation of anagen","type":"related"},{"name":"stimulation of anagen","type":"narrow"},{"name":"up regulation of anagen","type":"related"},{"name":"up-regulation of anagen","type":"related"},{"name":"upregulation of anagen","type":"related"}],"termid":"GO:0051885"}


id: MONDO:0001308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal deposit","secondary_identifiers":["icd11.foundation:1760427912","DOID:11547","ICD9:371.10","MEDGEN:511537","SCTID:74460005","UMLS:C0162281","ICD10CM:H18.0"],"synonyms":[{"name":"deposits - cornea","type":"exact"}],"termid":"MONDO:0001308","xrefs":{"Monarch":{"xref_id":"0001308"}}}


id: PBO:0078765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA mitochondrial 2-thiouridylase","termid":"PBO:0078765"}


id: PBO:0064297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perilipin 5","termid":"PBO:0064297"}


id: PBO:0074103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 27 member 6","termid":"PBO:0074103"}


id: PBO:0042786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 135","termid":"PBO:0042786"}


id: PBO:0061507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexin 2","termid":"PBO:0061507"}


id: GO:0061656
data:
  {"annotated_genes":["SJAG_00604","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76186,104796],"is_not":false,"summary":null,"term":"GO:0061656"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both the X-SUMO and Y-SUMO linkages are thioester bonds between the C-terminal amino acid of SUMO and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO transferase activity","termid":"GO:0019789"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0019787","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"SUMO conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061656","terms_by_termid":{"GO:0061656":null}}


id: GO:0061158
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118612],"is_not":false,"summary":null,"term":"GO:0061158"}]},"cv_name":"biological_process","definition":"An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.","definition_xrefs":["GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"3'-UTR-mediated mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061158","terms_by_termid":{"GO:0061158":null}}


id: GO:0031976
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any thylakoid within a plastid.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid thylakoid","termid":"GO:0031976"}


id: MONDO:0017828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary renal tubular acidosis (obsolete MONDO:0017828)","secondary_identifiers":["Orphanet:314822"],"termid":"MONDO:0017828","xrefs":{"Monarch":{"xref_id":"0017828"}}}


id: PBO:0002924
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF35","termid":"PBO:0002924"}


id: GO:0097541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the axoneme consisting of a highly electron-dense region at the distal end of the ciliary transition zone within the axonemal lumen at which the axonemal central pair of microtubules is connected to the rest of the axonemal structure.","definition_xrefs":["PMID:23352055","GOC:cilia","PMID:4554367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal basal plate","synonyms":[{"name":"axoneme basal plate","type":"exact"},{"name":"basal plate","type":"broad"}],"termid":"GO:0097541"}


id: GO:0034356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD) from the nicotinamide riboside (NR).","definition_xrefs":["PMID:17482543"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD biosynthesis via nicotinamide riboside salvage pathway (obsolete GO:0034356)","secondary_identifiers":["Reactome:R-HSA-197264","MetaCyc:PWY3O-4106"],"synonyms":[{"name":"NR salvage pathway","type":"exact"},{"name":"nicotinamide riboside salvage pathway","type":"exact"}],"termid":"GO:0034356"}


id: GO:0035357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a ligand binding to an intracellular peroxisome proliferator activated receptor (alpha, beta or gamma) of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:18221086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"peroxisome proliferator activated receptor signaling pathway","synonyms":[{"name":"PPAR signaling pathway","type":"exact"},{"name":"peroxisome proliferator activated receptor signalling pathway","type":"exact"},{"name":"peroxisome proliferator-activated receptor signaling pathway","type":"exact"}],"termid":"GO:0035357"}


id: MONDO:0000172
data:
  {"annotated_genes":["SJAG_00831","SJAG_01491","SJAG_04316","SJAG_03188","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033556"},{"annotations":[87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[86297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[87014,87015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00831":null,"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112375","OMIMPS:613155"],"termid":"MONDO:0000172","terms_by_termid":{"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0014141":null,"MONDO:0033556":null},"xrefs":{"Monarch":{"xref_id":"0000172"}}}


id: GO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor, which may be a single protein or a complex, in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase II basal transcription factor binding (obsolete GO:0001083)","synonyms":[{"name":"RNA polymerase II basal transcription factor binding transcription factor activity","type":"exact"}],"termid":"GO:0001083"}


id: PBO:0047034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member B","termid":"PBO:0047034"}


id: FYECO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to stationary phase.","definition_xrefs":["PMID:10467002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase","termid":"FYECO:0000123"}


id: MONDO:0100270
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"}]},"cv_name":"mondo","definition":"Any Zellweger spectrum disorder in which the cause of the disease is a mutation in the PEX19 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0019053","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX19 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX19 related Zellweger spectrum disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX19 defect","type":"exact"}],"termid":"MONDO:0100270","terms_by_termid":{"MONDO:0013951":null},"xrefs":{"Monarch":{"xref_id":"0100270"}}}


id: PBO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.2","termid":"PBO:0000817"}


id: PBO:0071993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 22","termid":"PBO:0071993"}


id: GO:0018097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of the chromophore S-4-hydroxycinnamyl-L-cysteine.","definition_xrefs":["RESID:AA0207"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine (obsolete GO:0018097)","synonyms":[{"name":"protein amino acid cinnamylation","type":"broad"}],"termid":"GO:0018097"}


id: PBO:0062020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 1 pseudogene","termid":"PBO:0062020"}


id: GO:0048300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgD isotypes","termid":"GO:0048299"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgD isotypes","synonyms":[{"name":"down regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgD isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgD isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"negative regulation of class switching to IgD isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgD isotypes","type":"exact"}],"termid":"GO:0048300"}


id: PBO:0047170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 3","termid":"PBO:0047170"}


id: RO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"relationship between a neuron and a neuron projection bundle (e.g.- tract or nerve bundle) that one or more of its projections travels through.\\n","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculates_with","termid":"RO:0002101"}


id: GO:0052673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prenol + nucleoside triphosphate = prenyl phosphate + nucleoside diphosphate activity.","definition_xrefs":["GOC:ai","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"prenol kinase activity","synonyms":[{"name":"prenol phosphotransferase activity","type":"exact"},{"name":"prenyl alcohol kinase activity","type":"exact"},{"name":"prenyl alcohol phosphotransferase activity","type":"exact"}],"termid":"GO:0052673"}


id: GO:0045311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a pheromone stimulus.","definition_xrefs":["GOC:ai","GOC:dph","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"},{"relation_name":"part_of","term_name":"response to pheromone","termid":"GO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to pheromone","termid":"GO:0045311"}


id: CHEBI:17515
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-gamma-glutamyl-L-cysteine","termid":"CHEBI:17515"}


id: MONDO:0008603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated trigonocephaly in which the cause of the disease is a mutation in the FGFR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated trigonocephaly","termid":"MONDO:0018065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly 1","secondary_identifiers":["OMIM:190440","MEDGEN:98473","GARD:18558","UMLS:C0432122"],"synonyms":[{"name":"FGFR1 isolated trigonocephaly","type":"exact"},{"name":"TRIGNO1","type":"related"},{"name":"craniosynostosis, metopic","type":"related"},{"name":"isolated trigonocephaly caused by mutation in FGFR1","type":"exact"},{"name":"trigonocephaly 1","type":"exact"},{"name":"trigonocephaly type 1","type":"exact"}],"termid":"MONDO:0008603","xrefs":{"Monarch":{"xref_id":"0008603"}}}


id: PBO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octomeric","termid":"PBO:0002497"}


id: MONDO:0007751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, autosomal dominant, type B","secondary_identifiers":["SCTID:238081000","UMLS:C1704417","OMIM:144010","GARD:8588","MEDGEN:309962"],"synonyms":[{"name":"apolipoprotein B-100, familial defective","type":"related"},{"name":"apolipoprotein B-100, familial ligand-defective","type":"related"},{"name":"hypercholesterolemia, autosomal dominant, type B","type":"exact"},{"name":"hypercholesterolemia, familial, 2","type":"exact"},{"name":"hypercholesterolemia, familial, due to ligand-defective apolipoprotein B","type":"related"}],"termid":"MONDO:0007751","xrefs":{"Monarch":{"xref_id":"0007751"}}}


id: PR:O14226
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- exo84 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo84 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.08c","synonyms":[{"name":"Spom972h-exo84","type":"exact"}],"termid":"PR:O14226"}


id: PBO:0091243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-glutamate cyclase Dgc1","termid":"PBO:0091243"}


id: PBO:0018278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Pci2 (predicted)","termid":"PBO:0018278"}


id: FYECO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which iron trichloride was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ FeCl3","secondary_identifiers":["PMID:7565608"],"synonyms":[{"name":"iron chloride added","type":"related"},{"name":"iron trichloride added","type":"exact"},{"name":"iron(III) chloride","type":"exact"}],"termid":"FYECO:0000281"}


id: GO:1990483
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A histone deacetylase complex involved in chromatin organization. In Schizosaccharomyces pombe this complex consists of Clr6, Nts1, Mug165, and Png3.","definition_xrefs":["PMID:25002536"],"gene_count":0,"genotype_count":0,"name":"obsolete Clr6 histone deacetylase complex I'' (obsolete GO:1990483)","termid":"GO:1990483"}


id: PBO:0003511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec66 (predicted)","termid":"PBO:0003511"}


id: PR:Q10432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccq1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil quantitatively-enriched protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.07","synonyms":[{"name":"SMC protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ccq1","type":"exact"},{"name":"structural maintenance of chromosomes protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10432"}


id: GO:1902595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA replication origin binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:11850415"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA replication origin binding (obsolete GO:1902595)","synonyms":[{"name":"regulation of ARS binding","type":"narrow"}],"termid":"GO:1902595"}


id: GO:0019916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-alanine.","definition_xrefs":["RESID:AA0191"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-D-alanine racemization, direct (obsolete GO:0019916)","termid":"GO:0019916"}


id: GO:2000219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"},{"relation_name":"is_a","term_name":"regulation of invasive growth in response to glucose limitation","termid":"GO:2000217"},{"relation_name":"positively_regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"positive regulation of colony morphology","type":"related"}],"termid":"GO:2000219"}


id: PBO:0073082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly factor 2","termid":"PBO:0073082"}


id: GO:0070055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of a mRNA containing an HAC1-type intron at the 5' and 3' splice sites. The cleavage step is part of unconventional mRNA splicing, and contributes to the endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:krc","GOC:bf","GOC:mah","PMID:10357823"],"gene_count":0,"genotype_count":0,"name":"obsolete mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:0070055)","synonyms":[{"name":"ERN1-mediated XBP-1 mRNA cleavage","type":"related"},{"name":"HAC1 mRNA cleavage","type":"narrow"},{"name":"HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"XBP1 mRNA cleavage","type":"narrow"}],"termid":"GO:0070055"}


id: GO:0036058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a filtration diaphragm, a specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["PMID:18971929","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"filtration diaphragm assembly","termid":"GO:0036058"}


id: PBO:0068393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 213","termid":"PBO:0068393"}


id: GO:0040001
data:
  {"annotated_genes":["SJAG_02695","SJAG_00140","SJAG_00594","SJAG_02651","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105189,117241,104860,76698,97308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of the mitotic spindle to a specific location in the cell occurs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization involved in mitosis","termid":"GO:1902850"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00140":null,"SJAG_00594":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0051179","GO:0007049","GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"establishment of mitotic spindle localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030608","GO:0030606","GO:0030605","GO:0018986","GO:0030610"],"synonyms":[{"name":"establishment of mitotic spindle localisation","type":"exact"},{"name":"mitotic spindle positioning","type":"exact"},{"name":"mitotic spindle positioning and orientation","type":"narrow"},{"name":"mitotic spindle positioning or orientation","type":"exact"},{"name":"spindle positioning during mitosis","type":"related"},{"name":"spindle positioning involved in mitotic cell cycle","type":"exact"}],"termid":"GO:0040001","terms_by_termid":{"GO:0000132":null}}


id: PBO:0071913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 52","termid":"PBO:0071913"}


id: MOD:01846
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, and a copper atom to the methanobactin OB3b copper complex.","definition_xrefs":["PubMed:18729522","RESID:AA0552","PubMed:20961038","PubMed:21254756","PubMed:15361623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"methanobactin OB3b copper complex","synonyms":[{"name":"METAL copper [Cu-methanobactin OB3b complex]","type":"exact"},{"name":"bis[4-(hydroxy[sulfanyl-kappaS]methylidene)-1,3-oxazol-5(4H)-onato-kappaN]copper","type":"exact"},{"name":"methanobactin OB3b copper complex","type":"exact"}],"termid":"MOD:01846"}


id: PBO:0044980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 33","termid":"PBO:0044980"}


id: FYPO:0004822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA-DNA hybrid molecules is greater than normal in ribosomal DNA regions.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of R-loops","termid":"FYPO:0007901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of R-loops at rDNA","synonyms":[{"name":"increased RNA-DNA hybrid level at rDNA","type":"exact"},{"name":"increased level of DNA:RNA hybrids at rDNA","type":"exact"},{"name":"increased level of RNA-DNA hybrids at rDNA","type":"exact"},{"name":"increased level of RNA-DNA hybrids at rDNA during mitotic cell cycle","type":"related"},{"name":"increased level of RNA-DNA hybrids at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004822"}


id: FYPO:0007016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of rRNA genes in ribosomal DNA repeat regions is increased.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at rDNA","termid":"FYPO:0004032"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of rRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of rRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of rRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of ribosomal RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at rRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007016"}


id: PBO:0004439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein involved in phosphoinositide metabolism (predicted)","termid":"PBO:0004439"}


id: PBO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 1","termid":"PBO:0044472"}


id: FYPO:0007065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 20S rRNA precursor measured in a cell is too low to detect.","definition_xrefs":["PMID:29641590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"20S rRNA precursor absent from cell","synonyms":[{"name":"20S rRNA precursor absent from cell during mitotic cell cycle","type":"related"},{"name":"20S rRNA precursor absent from cell during vegetative growth","type":"exact"},{"name":"20S rRNA precursor transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable 20S rRNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0007065"}


id: MONDO:1012419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"episodic falling, non-human animal","termid":"MONDO:1011885"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic falling, dog","secondary_identifiers":["OMIA:001592-9615"],"termid":"MONDO:1012419","xrefs":{"Monarch":{"xref_id":"1012419"}}}


id: PBO:0067393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 498, pseudogene","termid":"PBO:0067393"}


id: MONDO:0005635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of a glandular and a mesenchymal (fibromyomatous) component. It occurs in the uterine corpus and the cervix. A variant of adenomyoma associated with glandular architectural complexity is called atypical polypoid adenomyoma. Simple polypectomy is usually curative. Atypical polypoid adenomyoma may recur following polypectomy.","definition_xrefs":["NCIT:C3726"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinosarcoma","termid":"MONDO:0002928"},{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomyoma","secondary_identifiers":["DOID:2609","UMLS:C0206622","MEDGEN:64617","ICDO:8932/0","MESH:D018194","EFO:0007133"],"synonyms":[{"name":"adenomyoma","type":"exact"},{"name":"adenomyoma (morphologic abnormality)","type":"exact"},{"name":"adenomyoma, benign","type":"exact"}],"termid":"MONDO:0005635","xrefs":{"Monarch":{"xref_id":"0005635"}}}


id: PBO:0034036
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_citation","termid":"PBO:0034036"}


id: PBO:0034123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_reversal_relationship_with","termid":"PBO:0034123"}


id: GO:0097469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate. This reaction requires the binding of a regulatory cyclin subunit.","definition_xrefs":["GOC:al","GOC:vw","PMID:1372994"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein tyrosine kinase activity (obsolete GO:0097469)","synonyms":[{"name":"cyclin-dependent protein tyrosine kinase activity","type":"exact"}],"termid":"GO:0097469"}


id: PBO:0117172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLDND1 antisense RNA 1","termid":"PBO:0117172"}


id: GO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitters and the storage of the synthesized molecules.","definition_xrefs":["ISBN:0123668387","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process and storage (obsolete GO:0001506)","synonyms":[{"name":"neurotransmitter anabolism and storage","type":"exact"},{"name":"neurotransmitter biosynthetic process and storage","type":"exact"},{"name":"neurotransmitter formation and storage","type":"exact"},{"name":"neurotransmitter synthesis and storage","type":"exact"}],"termid":"GO:0001506"}


id: FYPO:0000137
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119760,119840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects any mitotic cell cycle checkpoint.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phenotype","termid":"FYPO:0000631"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"signal transduction phenotype","termid":"FYPO:0003478"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"mitotic cell cycle checkpoint phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"fission yeast mitotic cell cycle checkpoint phenotype","type":"exact"}],"termid":"FYPO:0000137","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0040444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B5, pseudogene","termid":"PBO:0040444"}


id: MONDO:0014855
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85990],"is_not":false,"summary":null,"term":"MONDO:0014855"}]},"cv_name":"mondo","definition":"Any autosomal dominant intellectual disability in which the cause of the disease is a heterozygous mutation in the GNB1 gene. It is characterized by global developmental delay, intellectual disability, hypotonia, structural brain abnormalities, and seizures. Other less common findings include dystonia, visual impairment, behavior problems, growth delay, craniofacial defects, and genitourinary abnormalities in males.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"excluded_subClassOf","term_name":"obsolete global developmental delay-neuro-ophthalmological abnormalities-seizures-intellectual disability syndrome (obsolete MONDO:0024252)","termid":"MONDO:0024252"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934741","OMIM:616973","Orphanet:488613","DOID:0070072","GARD:18501","UMLS:C4310774"],"synonyms":[{"name":"GNB1 autosomal dominant non-syndromic intellectual disability","type":"narrow"},{"name":"GNB1-related disorder","type":"exact"},{"name":"GNB1-related neurodevelopmental disorder","type":"exact"},{"name":"MRD42","type":"exact"},{"name":"autosomal dominant intellectual disability 42","type":"exact"},{"name":"autosomal dominant mental retardation 42","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 42","type":"narrow"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in GNB1","type":"narrow"},{"name":"global developmental delay-neuro-ophthalmological abnormalities-seizures-intellectual disability syndrome","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 42","type":"exact"},{"name":"intellectual disability, autosomal dominant 42","type":"exact"},{"name":"intellectual disability, autosomal dominant type 42","type":"exact"},{"name":"mental retardation, autosomal dominant 42","type":"exact"},{"name":"mental retardation, autosomal dominant type 42","type":"exact"}],"termid":"MONDO:0014855","terms_by_termid":{"MONDO:0014855":null},"xrefs":{"Monarch":{"xref_id":"0014855"}}}


id: GO:0042538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic response","termid":"GO:0006972"},{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperosmotic salinity response","synonyms":[{"name":"response to hyperosmotic salt stress","type":"exact"},{"name":"salt tolerance","type":"related"}],"termid":"GO:0042538"}


id: MONDO:0011343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular atrophoderma, perioral pigmented, with milia and epidermoid cysts","secondary_identifiers":["MESH:C566360","OMIM:603587","MEDGEN:350955","UMLS:C1863692"],"synonyms":[{"name":"follicular atrophoderma, perioral pigmented, with milia and epidermoid cysts","type":"exact"}],"termid":"MONDO:0011343","xrefs":{"Monarch":{"xref_id":"0011343"}}}


id: PBO:0086287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in chromosomal DNA replication; interacts with Sld3p and reduces its affinity for Cdc45p; deletion mutant has aberrant mitochondria; ortholog of human MTBP, which is a DNA replication origin firing factor","termid":"PBO:0086287"}


id: FYPO:0005507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature ribosomal RNA (rRNA) measured in a cell is higher than normal. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered mature rRNA level during vegetative growth","termid":"FYPO:0006468"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased mature rRNA level","synonyms":[{"name":"increased mature rRNA accumulation","type":"related"},{"name":"increased mature rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature rRNA level during vegetative growth","type":"exact"},{"name":"increased mature rRNA transcript level","type":"broad"},{"name":"increased mature ribosomal RNA level","type":"exact"},{"name":"increased rRNA level","type":"broad"}],"termid":"FYPO:0005507"}


id: PBO:0073725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 6 pseudogene 1","termid":"PBO:0073725"}


id: GO:0032792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor CREB.","definition_xrefs":["GOC:dph","GOC:ecd","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"negative regulation of CREB transcription factor activity","synonyms":[{"name":"CREB inhibitor","type":"related"},{"name":"inhibition of CREB transcription factor","type":"exact"}],"termid":"GO:0032792"}


id: GO:2000417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of eosinophil migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"negatively_regulates","term_name":"eosinophil migration","termid":"GO:0072677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil migration","termid":"GO:2000417"}


id: MONDO:0018820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome is a rare, genetic, neurodegenerative disease characterized by episodic metabolic encephalomyopathic crises (of variable frequency and severity which are frequently precipitated by an acute illness) which manifest with profound muscle weakness, ataxia, seizures, cardiac arrhythmias, rhabdomyolysis with myoglobinuria, elevated plasma creatine kinase, hypoglycemia, lactic acidosis, increased acylcarnitines and a disorientated or comatose state. Global developmental delay, intellectual disability and cortical, pyramidal and cerebellar signs develop with subsequent progressive neurodegeneration causing loss of expressive language and varying degrees of cerebral atrophy.","definition_xrefs":["Orphanet:480864"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome","secondary_identifiers":["UMLS:C5567524","GARD:13423","MEDGEN:1798947","OMIM:616878","NORD:1944","DOID:0081386"],"synonyms":[{"name":"MECRCN","type":"exact"},{"name":"TANGO2 Deficiency Disorder","type":"exact"},{"name":"TANGO2 deficiency","type":"exact"},{"name":"metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration","type":"exact"},{"name":"transport and golgi organisation protein 2 (TANGO2) deficiency","type":"exact"},{"name":"transport and golgi organization protein 2 (TANGO2) deficiency","type":"exact"}],"termid":"MONDO:0018820","xrefs":{"Monarch":{"xref_id":"0018820"}}}


id: MONDO:1010827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndactyly that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly, non-human animal","termid":"MONDO:1010160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly, cattle","secondary_identifiers":["OMIA:000963-9913"],"termid":"MONDO:1010827","xrefs":{"Monarch":{"xref_id":"1010827"}}}


id: GO:0050991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient sulfation of peptidyl-threonine to form O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-sulfo-L-threonine (obsolete GO:0050991)","termid":"GO:0050991"}


id: MONDO:0011920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYO1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 48","secondary_identifiers":["OMIM:607841","GARD:18120","MEDGEN:375052","DOID:0110571","MESH:C564322","UMLS:C1842939"],"synonyms":[{"name":"DFNA48","type":"narrow"},{"name":"MYO1A autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 48","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 48","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYO1A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 48","type":"narrow"},{"name":"deafness, autosomal dominant 48","type":"narrow"},{"name":"deafness, autosomal dominant type 48","type":"narrow"}],"termid":"MONDO:0011920","xrefs":{"Monarch":{"xref_id":"0011920"}}}


id: FYPO:0002255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the nucleus is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology","termid":"FYPO:0002256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"enlarged nucleus","synonyms":[{"name":"enlarged nuclei","type":"exact"}],"termid":"FYPO:0002255"}


id: _global:results_in_disappearance_of
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_ending_of","termid":"RO:0002552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_disappearance_of","termid":"_global:results_in_disappearance_of"}


id: PBO:0070283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 24","termid":"PBO:0070283"}


id: MONDO:0015655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral malformation with epilepsy (obsolete MONDO:0015655)","secondary_identifiers":["Orphanet:166478"],"termid":"MONDO:0015655","xrefs":{"Monarch":{"xref_id":"0015655"}}}


id: GO:0019090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a rRNA, ribosomal ribonucleic acid, is transported from the mitochondrial matrix into the cytosol.","definition_xrefs":["GOC:ai","PMID:28115039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA transport","termid":"GO:0051029"},{"relation_name":"is_a","term_name":"export from the mitochondrion","termid":"GO:0170037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial rRNA export from mitochondrion","synonyms":[{"name":"export of mitochondrial rRNA","type":"broad"},{"name":"mitochondrial rRNA export","type":"exact"},{"name":"mitochondrial rRNA export from mitochondria","type":"exact"},{"name":"mitochondrial rRNA export out of mitochondrion","type":"exact"},{"name":"mitochondrial rRNA transport from mitochondrion","type":"exact"},{"name":"mitochondrial rRNA, mitochondrial export","type":"exact"}],"termid":"GO:0019090"}


id: PBO:0028399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ricinoleic_acid","termid":"PBO:0028399"}


id: MONDO:0008114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the presence of persistent and recurrent irrational thoughts (obsessions), resulting in marked anxiety and repetitive excessive behaviors (compulsions) as a way to try to decrease that anxiety.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obsessive-compulsive disorder","secondary_identifiers":["DOID:10933","MEDGEN:14445","NCIT:C88411","ICD10CM:F42","OMIM:164230","icd11.foundation:1582741816","UMLS:C0028768","SCTID:191736004","MESH:D009771","EFO:0004242","ICD9:300.3"],"synonyms":[{"name":"Anancastic neurosis","type":"exact"},{"name":"OCD","type":"related"},{"name":"obsessive compulsive disorder","type":"exact"},{"name":"obsessive-compulsive disorder","type":"exact"},{"name":"obsessive-compulsive disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0008114","xrefs":{"Monarch":{"xref_id":"0008114"}}}


id: MONDO:0100211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome with immune dysregulation","termid":"MONDO:0100210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"growth hormone insensitivity with immune dysregulation 1, autosomal recessive","secondary_identifiers":["OMIM:245590","NANDO:2200737","DOID:0080836","GARD:18311","SCTID:724179008","MEDGEN:1734133","MESH:C537871","UMLS:C5435698","Orphanet:220465"],"synonyms":[{"name":"Laron syndrome due to postreceptor defect","type":"exact"},{"name":"Laron syndrome with immunodeficiency","type":"exact"},{"name":"Laron-like syndrome","type":"exact"},{"name":"growth hormone insensitivity due to postreceptor defect","type":"exact"},{"name":"growth hormone insensitivity with immunodeficiency","type":"related"},{"name":"short stature due to STAT5b deficiency","type":"exact"}],"termid":"MONDO:0100211","xrefs":{"Monarch":{"xref_id":"0100211"}}}


id: PBO:0080385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog C","termid":"PBO:0080385"}


id: PBO:0058524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6069","termid":"PBO:0058524"}


id: PBO:0068006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 308","termid":"PBO:0068006"}


id: PBO:0091659
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric Reductase in Pombe","termid":"PBO:0091659"}


id: PBO:0075363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 3","termid":"PBO:0075363"}


id: GO:0007401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete pan-neural process (obsolete GO:0007401)","synonyms":[{"name":"pan-neural process","type":"exact"}],"termid":"GO:0007401"}


id: GO:0016762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.","definition_xrefs":["GOC:ask","PMID:1554366","PMID:1400418","EC:2.4.1.207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"xyloglucan:xyloglucosyl transferase activity","secondary_identifiers":["MetaCyc:2.4.1.207-RXN","GO:0080039"],"synonyms":[{"name":"endo-xyloglucan transferase activity","type":"related"},{"name":"endoxyloglucan transferase activity","type":"exact"},{"name":"xyloglucan endotransglucosylase activity","type":"related"},{"name":"xyloglucan:xyloglucan xyloglucanotransferase activity","type":"related"}],"termid":"GO:0016762"}


id: PBO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1212 family protein","termid":"PBO:0001639"}


id: PBO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding 1","termid":"PBO:0043123"}


id: PBO:0036009
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_tyrosine_phosphorylation_during_vegetative_growth","termid":"PBO:0036009"}


id: GO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the liver over time, from its formation to the mature structure. The liver is an exocrine gland which secretes bile and functions in metabolism of protein and carbohydrate and fat, synthesizes substances involved in the clotting of the blood, synthesizes vitamin A, detoxifies poisonous substances, stores glycogen, and breaks down worn-out erythrocytes.","definition_xrefs":["ISBN:068340007X","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver development","termid":"GO:0001889"}


id: GO:0005214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a chitin-based cuticle. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cuticle","termid":"GO:0042302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}


id: PR:O74985
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- naa15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase A complex subunit nat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.07c","synonyms":[{"name":"NatA complex subunit nat1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-naa15","type":"exact"}],"termid":"PR:O74985"}


id: GO:0008118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP-N-acetyl-beta-neuraminate = an N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + CMP + H+.","definition_xrefs":["RHEA:52316","PMID:10206952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase activity","secondary_identifiers":["EC:2.4.3.6","MetaCyc:2.4.99.6-RXN"],"synonyms":[{"name":"N-acetyllactosaminide alpha-2,3-sialyltransferase","type":"exact"},{"name":"alpha2->3 sialyltransferase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate-beta-galactosyl(1->4)acetylglucosaminide alpha2->3-sialyltransferase activity","type":"related"},{"name":"neolactotetraosylceramide alpha-2,3-sialyltransferase activity","type":"narrow"}],"termid":"GO:0008118"}


id: PBO:0041267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q C chain","termid":"PBO:0041267"}


id: MONDO:1012329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laminitis, non-human animal","termid":"MONDO:1011767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, ass","secondary_identifiers":["OMIA:001225-9793"],"termid":"MONDO:1012329","xrefs":{"Monarch":{"xref_id":"1012329"}}}


id: GO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axial mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axial mesodermal cell fate determination","termid":"GO:0048324"},{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate determination","termid":"GO:0048336"},{"relation_name":"positively_regulates","term_name":"axial mesodermal cell fate determination","termid":"GO:0048323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axial mesodermal cell fate determination","synonyms":[{"name":"activation of axial mesodermal cell fate determination","type":"narrow"},{"name":"stimulation of axial mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of axial mesodermal cell fate determination","type":"exact"},{"name":"upregulation of axial mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048326"}


id: PBO:0013759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase Tit1","termid":"PBO:0013759"}


id: MONDO:0027767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss and redistribution of subcutaneous and/or visceral adipose tissue from specific regions of the body.","definition_xrefs":["NCIT:C131296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"partial lipodystrophy","secondary_identifiers":["DOID:0080299","MEDGEN:1386287","UMLS:C4316789"],"termid":"MONDO:0027767","xrefs":{"Monarch":{"xref_id":"0027767"}}}


id: PBO:0113263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate binding protein; forms a distinct complex with TORC1, induced by glutamine in a dose-dependent manner, resulting in TORC1 activation, suggesting dual roles as both a glutamine sensor and a direct TORC1 activator; functions as a cysteine sensor involved in TORC1 activation; involved in leucine- and glutamine-responsive TORC1 activation, independent of the Gtr/Ego pathway; related to human PLEKHF1; contains a PI3P binding FYVE domain; similar to Fab1p and Vps27p","termid":"PBO:0113263"}


id: GO:0140718
data:
  {"annotated_genes":["SJAG_04574","SJAG_02382","SJAG_01867","SJAG_03982","SJAG_03844","SJAG_03664","SJAG_02622","SJAG_02401","SJAG_02723","SJAG_01075","SJAG_01331","SJAG_01579","SJAG_00769","SJAG_03997","SJAG_04039","SJAG_01599","SJAG_04768","SJAG_04186","SJAG_03624","SJAG_02778","SJAG_00934","SJAG_03255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94416,103539],"is_not":false,"summary":null,"term":"GO:0140718"},{"annotations":[77632,106970],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[113601,92413,108473,104409,72553,71174,112415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[100625,118054,118417,92203,97517],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[91135,110798,87839,116834,112417,104508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[106629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"}]},"cv_name":"biological_process","definition":"The compaction of chromatin into a conformation that is refractory to transcription but that can be converted to euchromatin and allow transcription in specific contexts. These can be temporal (e.g., developmental states or specific cell-cycle stages), spatial (e.g., nuclear localization changes from the center to the periphery or vice versa due to exogenous factors/signals), or parental/heritable (e.g., monoallelic gene expression). In metazoa, this involves the methylation of histone H3K27.","definition_xrefs":["PMID:17936700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01331":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02401":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fHC assembly","type":"exact"},{"name":"facultative heterochromatin assembly","type":"exact"}],"termid":"GO:0140718","terms_by_termid":{"GO:0000183":null,"GO:0061188":null,"GO:0140718":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0005344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Sum3","termid":"PBO:0005344"}


id: GO:0018832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the elimination of HCl from a chloropropanol, yielding an epoxypropane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete halohydrin hydrogen-halide-lyase B activity (obsolete GO:0018832)","termid":"GO:0018832"}


id: PBO:0044483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily C member 1","termid":"PBO:0044483"}


id: GO:0007064
data:
  {"annotated_genes":["SJAG_00682","SJAG_05019","SJAG_00433","SJAG_04791","SJAG_03418","SJAG_04508","SJAG_00796","SJAG_00806","SJAG_01067","SJAG_02373","SJAG_04755","SJAG_01601","SJAG_02726","SJAG_02606","SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57518,62845,67354,70190,70872,71185,72356,88498,101158,104305,108052,110863],"is_not":false,"summary":null,"term":"GO:0007064"},{"annotations":[75235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034087"},{"annotations":[91264,99450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071962"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission.","definition_xrefs":["GOC:rn","PMID:14623866","PMID:10827941","PMID:11389843","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00433":null,"SJAG_00682":null,"SJAG_00796":null,"SJAG_00806":null,"SJAG_01067":null,"SJAG_01601":null,"SJAG_01831":null,"SJAG_02373":null,"SJAG_02606":null,"SJAG_02726":null,"SJAG_03418":null,"SJAG_04508":null,"SJAG_04755":null,"SJAG_04791":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0007064","terms_by_termid":{"GO:0007064":null,"GO:0034087":null,"GO:0071962":null}}


id: GO:0102283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: C20 sphinganine(1+) + NADP = C20 3-dehydrosphinganine(1+) + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-ketodihydrosphinganine (C20) reductase activity (obsolete GO:0102283)","termid":"GO:0102283"}


id: GO:2000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"positively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of proline metabolic process","synonyms":[{"name":"positive regulation of proline metabolism","type":"exact"}],"termid":"GO:2000216"}


id: PBO:0038277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified","termid":"PBO:0038277"}


id: MONDO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histidinemia (obsolete MONDO:0000695)","termid":"MONDO:0000695","xrefs":{"Monarch":{"xref_id":"0000695"}}}


id: GO:0043987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 10 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation (obsolete GO:0043987)","synonyms":[{"name":"histone H3 phosphorylation at S10","type":"exact"},{"name":"histone H3S10 phosphorylation","type":"exact"}],"termid":"GO:0043987"}


id: FYPO:0004492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 5' end of an RNA molecule is abnormal.","definition_xrefs":["GO:0000967","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abnormal RNA 5'-end processing","synonyms":[{"name":"abnormal RNA 5'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 5'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004492"}


id: PBO:0090239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane glucose/fructose:proton symporter Ght6","termid":"PBO:0090239"}


id: PBO:0055487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2920","termid":"PBO:0055487"}


id: PBO:0111772
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR domain","termid":"PBO:0111772"}


id: PBO:0035833
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_dimethylation_during_vegetative_growth","termid":"PBO:0035833"}


id: PBO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nibrin","termid":"PBO:0060564"}


id: FYPO:0008336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the poly(A) tails of mRNA molecules is abolished.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"abolished mRNA poly(A) tail uridylation","termid":"FYPO:0008336"}


id: PBO:0053253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX5 antisense RNA 1","termid":"PBO:0053253"}


id: MONDO:0002880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary and is characterized by the presence of mullerian-type epithelial tissue in a mesenchymal sarcomatous stroma. The presence of a high grade sarcomatous component is associated with recurrences and metastases.","definition_xrefs":["NCIT:C7317"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ovarian carcinosarcoma","termid":"MONDO:0003792"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian adenosarcoma","secondary_identifiers":["MEDGEN:277458","UMLS:C1335169","DOID:4115"],"synonyms":[{"name":"adenosarcoma of ovary","type":"exact"},{"name":"ovarian Mullerian adenosarcoma","type":"exact"},{"name":"ovarian Müllerian adenosarcoma","type":"exact"},{"name":"ovarian adenosarcoma","type":"exact"},{"name":"ovarian mesodermal adenosarcoma","type":"exact"},{"name":"ovarian mullerian adenosarcoma","type":"exact"},{"name":"ovary adenosarcoma","type":"exact"}],"termid":"MONDO:0002880","xrefs":{"Monarch":{"xref_id":"0002880"}}}


id: MONDO:0017262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A inherited ichthyosis that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete inherited non-syndromic ichthyosis (obsolete MONDO:0017262)","secondary_identifiers":["Orphanet:281082","icd11.foundation:213831678"],"synonyms":[{"name":"isolated inherited ichthyosis","type":"exact"},{"name":"nonsyndromic inherited ichthyosis","type":"exact"}],"termid":"MONDO:0017262","xrefs":{"Monarch":{"xref_id":"0017262"}}}


id: MONDO:0859345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete branchial arch abnormalities, choanal atresia, athelia, hearing loss, and hypothyroidism syndrome (obsolete MONDO:0859345)","termid":"MONDO:0859345","xrefs":{"Monarch":{"xref_id":"0859345"}}}


id: MONDO:0018465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Insulin autoimmune syndrome is a rare condition that causes low blood sugar (hypoglycemia). This occurs because the body begins to make a specific kind of protein called antibodies to attack insulin. Insulin is a naturally occurring hormone that is responsible for keeping blood sugar at a normal level. When blood sugar levels get too high, insulin helps to store the sugar for future use. People affected by insulin autoimmune syndrome have antibodies that attack insulin, causing it to work too hard and the level of blood sugar to become too low. Insulin autoimmune syndrome most often begins during adulthood.","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia","termid":"MONDO:0005803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0005046"],"is_obsolete":false,"name":"insulin autoimmune syndrome","secondary_identifiers":["UMLS:C0854359","ICD9:279.49","Orphanet:411593","DOID:0040100","SCTID:408539000","GARD:10808","MEDGEN:678528"],"synonyms":[{"name":"Hirata disease","type":"exact"},{"name":"insulin autoimmune hypoglycemia","type":"related"}],"termid":"MONDO:0018465","xrefs":{"Monarch":{"xref_id":"0018465"}}}


id: PBO:0031640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_shmoo_formation","termid":"PBO:0031640"}


id: FYPO:0004012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4,6-pyruvylated D-galactose (4,6-O-[(1R)-1-carboxyethylidene]-D-galactose) measured at the cell surface is normal (i.e. indistinguishable from wild type). The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:25195688","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cell surface pyruvylated galactose level","synonyms":[{"name":"normal cell surface 4,6-4,6-O-[(1R)-1-carboxyethylidene]-D-galactose level","type":"exact"},{"name":"normal cell surface 4,6-pyruvylated D-galactose level","type":"exact"},{"name":"normal cell surface PvGal level","type":"exact"},{"name":"normal cell surface pyruvylated galactose level during mitotic cell cycle","type":"related"},{"name":"normal cell surface pyruvylated galactose level during vegetative growth","type":"exact"},{"name":"normal level of pyruvylated galactose at cell surface","type":"exact"}],"termid":"FYPO:0004012"}


id: GO:0045741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of EGF-activated receptor activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor-activated receptor activity","termid":"GO:0007176"},{"relation_name":"is_a","term_name":"positive regulation of protein tyrosine kinase activity","termid":"GO:0061098"},{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor-activated receptor activity","synonyms":[{"name":"activation of epidermal growth factor receptor activity","type":"narrow"},{"name":"positive regulation of EGF receptor activity","type":"exact"},{"name":"positive regulation of EGFR activity","type":"exact"},{"name":"positive regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"stimulation of epidermal growth factor receptor activity","type":"narrow"},{"name":"up regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor activity","type":"exact"},{"name":"upregulation of epidermal growth factor receptor activity","type":"exact"}],"termid":"GO:0045741"}


id: PBO:0080089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 50","termid":"PBO:0080089"}


id: MONDO:1010524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, American mink","secondary_identifiers":["OMIA:000197-452646"],"termid":"MONDO:1010524","xrefs":{"Monarch":{"xref_id":"1010524"}}}


id: PBO:0089339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no go decay endonuclease Cue2","termid":"PBO:0089339"}


id: GO:0030560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of pseudouridylation in a tRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification guide activity","termid":"GO:0030557"},{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"tRNA pseudouridylation guide activity","termid":"GO:0030560"}


id: PR:O13870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.05","synonyms":[{"name":"Spom972h-not3","type":"exact"}],"termid":"PR:O13870"}


id: SO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where the final nucleotide assignment differs from the original assembly due to an improvement that replaces a mistake.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assembly_error_correction","synonyms":[{"name":"assembly error correction","type":"related"}],"termid":"SO:0001525"}


id: GO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptamine:oxygen oxidoreductase (deaminating) activity (obsolete GO:0052593)","termid":"GO:0052593"}


id: PBO:0114872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, chitin synthase regulatory factor Cfh4","termid":"PBO:0114872"}


id: MONDO:0010924
data:
  {"annotated_genes":["SJAG_03804","SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024554"},{"annotations":[87397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013345"}]},"cv_name":"mondo","definition":"D-2-hydroxyglutaric aciduria (D-2-HGA) is a rare clinically variable neurological form of 2-hydroxyglutaric aciduria characterized biochemically by elevated D-2-hydroxyglutaric acid (D-2-HG) in the urine, plasma and cerebrospinal fluid.","definition_xrefs":["Orphanet:79315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-hydroxyglutaric aciduria","termid":"MONDO:0016001"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03804":null,"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"D-2-hydroxyglutaric aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1170122566","OMIMPS:600721","UMLS:C1833429","SCTID:237960000","DOID:0050575","MEDGEN:322192","GARD:5661"],"synonyms":[{"name":"D-2-HGA","type":"exact"},{"name":"D-2-hydroxyglutaric acidemia","type":"exact"},{"name":"D-2-hydroxyglutaric aciduria 1","type":"related"},{"name":"D-2-hydroxyglutaric aciduria type 1","type":"exact"},{"name":"D2HA","type":"related"},{"name":"D2HGA","type":"related"}],"termid":"MONDO:0010924","terms_by_termid":{"MONDO:0013345":null,"MONDO:0024554":null},"xrefs":{"Monarch":{"xref_id":"0010924"}}}


id: FYPO:0001232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex are normal when the cell is subject to nitrogen starvation. The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["PomBase:mah","GO:0005938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cortex morphology","termid":"FYPO:0001231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cortex morphology during nitrogen starvation","synonyms":[{"name":"normal cell cortex morphology during nitrogen depletion","type":"exact"},{"name":"normal cell cortex morphology during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0001232"}


id: PBO:0045038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dispatched RND transporter family member 3","termid":"PBO:0045038"}


id: MONDO:0800409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular fibrillation during myocardial infarction, susceptibility to","secondary_identifiers":["UMLS:C4017668","MEDGEN:866105"],"termid":"MONDO:0800409","xrefs":{"Monarch":{"xref_id":"0800409"}}}


id: MONDO:0033211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diencephalic-mesencephalic junction dysplasia syndrome (obsolete MONDO:0033211)","termid":"MONDO:0033211","xrefs":{"Monarch":{"xref_id":"0033211"}}}


id: PATO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001011 absolute intensity (obsolete PATO:0001011)","termid":"PATO:0001011"}


id: MOD:01670
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-methyl-L-lysine.","definition_xrefs":["PubMed:16091367","PubMed:17260957","RESID:AA0524","PubMed:16195462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"halogenated lysine","termid":"MOD:01672"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-chloro-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(chloroamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-chlorolysine","type":"exact"},{"name":"N6-chloro-L-lysine","type":"exact"},{"name":"N6ClLys","type":"exact"},{"name":"epsilon-chlorolysine","type":"exact"},{"name":"lysine chloramine","type":"exact"}],"termid":"MOD:01670"}


id: PBO:0116322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase F(o) subunit F","termid":"PBO:0116322"}


id: PBO:0041593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5B","termid":"PBO:0041593"}


id: MONDO:0022559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system vasculitis that has a benign course, with acute onset of neurologic symptoms, usually in the form of severe headache and/or a focal neurologic event.","definition_xrefs":["PMID:17043471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign angiitis of the central nervous system","secondary_identifiers":["GARD:8704"],"synonyms":[{"name":"BACNS","type":"related"}],"termid":"MONDO:0022559","xrefs":{"Monarch":{"xref_id":"0022559"}}}


id: PATO:0000883
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000883 female fertility value (obsolete PATO:0000883)","termid":"PATO:0000883"}


id: GO:0032443
data:
  {"annotated_genes":["SJAG_01307","SJAG_02044","SJAG_02104","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88904,106164],"is_not":false,"summary":null,"term":"GO:0032443"},{"annotations":[94222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[110160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol biosynthetic process","termid":"GO:0106118"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032443","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0070452":null}}


id: GO:0016594
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74551],"is_not":false,"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to glycine, aminoethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycine binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Gly binding","type":"exact"},{"name":"aminoacetic acid binding","type":"exact"},{"name":"aminoethanoic acid binding","type":"exact"}],"termid":"GO:0016594","terms_by_termid":{"GO:0016594":null}}


id: PBO:0085720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in telomeric and mating-type locus silencing; interacts with Sir2p and also interacts with Gal11p, which is a component of the RNA pol II mediator complex; ESC8 has a paralog, IOC3, that arose from the whole genome duplication","termid":"PBO:0085720"}


id: FYPO:0002675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTDP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular dTDP level","synonyms":[{"name":"increased cellular dTDP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dTDP level during vegetative growth","type":"exact"},{"name":"increased dTDP accumulation","type":"related"}],"termid":"FYPO:0002675"}


id: PBO:0067753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 52","termid":"PBO:0067753"}


id: GO:1903374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of a subarachnoid space over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","GOC:cjm","Wikipedia:Subarachnoid_space","GO_REF:0000094"],"gene_count":0,"genotype_count":0,"name":"obsolete subarachnoid space development (obsolete GO:1903374)","synonyms":[{"name":"cavitas subarachnoidea development","type":"related"},{"name":"cavum subarachnoideale development","type":"related"},{"name":"spatium leptomeningeum development","type":"related"},{"name":"spatium subarachnoideum development","type":"related"},{"name":"subarachnoid cavity development","type":"related"}],"termid":"GO:1903374"}


id: GO:0010489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-4-keto-6-deoxyglucose = UDP-4-keto-rhamnose.","definition_xrefs":["GOC:tair_curators","PMID:17190829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity","termid":"GO:0010489"}


id: GO:0031920
data:
  {"annotated_genes":["SJAG_02962","SJAG_02152","SJAG_03652","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119047,90478,90479,117768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"}]},"cv_name":"biological_process","definition":"The directed movement of pyridoxal into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pyridoxal, 3-hydroxy-5-(hydroxymethyl)-2-methyl-4-pyridinecarboxaldehyde, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"vitamin B6 transport","termid":"GO:0031919"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pyridoxal transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031920","terms_by_termid":{"GO:1903090":null}}


id: MONDO:0031009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 2","secondary_identifiers":["GARD:16439","UMLS:C5543273","MEDGEN:1782592","OMIM:619267"],"synonyms":[{"name":"GT2","type":"exact"},{"name":"Glanzmann thrombasthenia 2","type":"exact"},{"name":"bleeding disorder, platelet-type, 23","type":"exact"}],"termid":"MONDO:0031009","xrefs":{"Monarch":{"xref_id":"0031009"}}}


id: PBO:0055269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2696","termid":"PBO:0055269"}


id: PBO:0053685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 877","termid":"PBO:0053685"}


id: PBO:0044517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled associated activator of morphogenesis 1","termid":"PBO:0044517"}


id: GO:0103090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(6'-methylthio)hexylmalate = H+ + 2-oxo-9-methylthiononanoate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiohexylmalate dehydrogenase activity (obsolete GO:0103090)","termid":"GO:0103090"}


id: PBO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYFIP related Rac1 interactor A","termid":"PBO:0044497"}


id: FYPO:0003606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of prophase of the first meiotic nuclear division is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"decreased duration of meiotic cell cycle phase","termid":"FYPO:0006851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of meiotic prophase I","synonyms":[{"name":"reduced duration of meiotic prophase I","type":"exact"},{"name":"short meiotic prophase I","type":"exact"}],"termid":"FYPO:0003606"}


id: GO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis-prenyl)n-diphosphate + isopentenyl diphosphate = (cis-prenyl)(n+1)-diphosphate + diphosphate.","definition_xrefs":["RHEA:18801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"rubber cis-polyprenylcistransferase activity","secondary_identifiers":["MetaCyc:2.5.1.20-RXN","EC:2.5.1.20"],"synonyms":[{"name":"cis-prenyl transferase activity","type":"related"},{"name":"isopentenyl pyrophosphate cis-1,4-polyisoprenyl transferase activity","type":"related"},{"name":"poly-cis-polyprenyl-diphosphate:isopentenyl-diphosphate polyprenylcistransferase activity","type":"related"},{"name":"rubber allyltransferase activity","type":"related"},{"name":"rubber polymerase activity","type":"related"},{"name":"rubber prenyltransferase activity","type":"related"},{"name":"rubber transferase activity","type":"broad"}],"termid":"GO:0050267"}


id: PBO:0089923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2011 family conserved fungal protein","termid":"PBO:0089923"}


id: PBO:0060574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 10","termid":"PBO:0060574"}


id: GO:0098759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-8","termid":"GO:0098758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-8","synonyms":[{"name":"cellular response to IL-8","type":"exact"}],"termid":"GO:0098759"}


id: SO:1000183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An alteration of the genome that leads to a change in the structure or number of one or more chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_variation","termid":"SO:0000240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_structure_variation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"chromosome structure variation","type":"exact"},{"name":"snpEff:CHROMOSOME_LARGE_DELETION","type":"exact"}],"termid":"SO:1000183"}


id: GO:0032057
data:
  {"annotated_genes":["SJAG_00169","SJAG_00786","SJAG_01942","SJAG_02592","SJAG_00690","SJAG_03869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99660,70305,75585,109982,115916,94704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"part_of","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of translation initiation in response to stress","type":"exact"},{"name":"down-regulation of translation initiation in response to stress","type":"exact"},{"name":"downregulation of translation initiation in response to stress","type":"exact"},{"name":"inhibition of translation initiation in response to stress","type":"narrow"}],"termid":"GO:0032057","terms_by_termid":{"GO:1990625":null}}


id: MONDO:0023176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formaldehyde poisoning","secondary_identifiers":["NORD:1155","GARD:2361","MESH:C537268"],"synonyms":[{"name":"Formalin intoxication","type":"related"},{"name":"Formalin toxicity","type":"related"},{"name":"formaldehyde exposure","type":"related"},{"name":"formaldehyde toxicity","type":"related"}],"termid":"MONDO:0023176","xrefs":{"Monarch":{"xref_id":"0023176"}}}


id: MONDO:0700252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the endocrine system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parneoplastic endocrine syndrome","termid":"MONDO:0700252","xrefs":{"Monarch":{"xref_id":"0700252"}}}


id: PBO:0069342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 602, pseudogene","termid":"PBO:0069342"}


id: MONDO:0019661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer syndrome type 3 (PS3) is a severe type of Pfeiffer syndrome (PS), characterized by bicoronal craniosynostosis, severe associated functional disorders, and hand, foot and elbow abnormalities.","definition_xrefs":["Orphanet:93260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pfeiffer syndrome","termid":"MONDO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Pfeiffer syndrome type 3","secondary_identifiers":["icd11.foundation:1910513449","MEDGEN:1748161","UMLS:C5438850","GARD:16809"],"termid":"MONDO:0019661","xrefs":{"Monarch":{"xref_id":"0019661"}}}


id: MONDO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dacryoadenitis","termid":"MONDO:0004804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic lacrimal gland enlargement","secondary_identifiers":["ICD9:375.03","MEDGEN:721929","UMLS:C1300133","DOID:12809","SCTID:4839005"],"synonyms":[{"name":"chronic enlargement of lacrimal gland","type":"exact"}],"termid":"MONDO:0001588","xrefs":{"Monarch":{"xref_id":"0001588"}}}


id: PBO:0069803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1089, pseudogene","termid":"PBO:0069803"}


id: GO:0102513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delphinidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = delphinidin 3,7-di O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 5-O-glucosyltransferase (vanilloyl-glucose dependent) activity (obsolete GO:0102513)","termid":"GO:0102513"}


id: GO:0070666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mast cell proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte proliferation","termid":"GO:0070663"},{"relation_name":"regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell proliferation","termid":"GO:0070666"}


id: PBO:0085871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; homologous to the medium chain of mammalian clathrin-associated protein complex; involved in vesicular transport","termid":"PBO:0085871"}


id: GO:0102421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: curcumin 4'-O-beta-D-gentiobioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotrioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete curcumin-4'-O-beta-D-gentiobioside 1,6-glucosyltransferase activity (obsolete GO:0102421)","termid":"GO:0102421"}


id: PBO:0082771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle checkpoint; involved in sensing lack of tension on mitotic chromosomes; protects centromeric Rec8p at meiosis I; required for accurate chromosomal segregation at meiosis II and for mitotic chromosome stability; recruits condensin to the pericentric region of chromosomes during meiosis; dissociates from pericentromeres when sister kinetochores are under tension","termid":"PBO:0082771"}


id: PBO:0053691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 886","termid":"PBO:0053691"}


id: PBO:0051263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-76-1 (pseudogene)","termid":"PBO:0051263"}


id: GO:1902290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["GOC:TermGenie","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of defense response to oomycetes","termid":"GO:1902288"},{"relation_name":"positively_regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response to oomycetes","synonyms":[{"name":"activation of defense response to oomycetes","type":"narrow"},{"name":"up regulation of defense response to oomycetes","type":"exact"},{"name":"up-regulation of defense response to oomycetes","type":"exact"},{"name":"upregulation of defense response to oomycetes","type":"exact"}],"termid":"GO:1902290"}


id: PR:O74362
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- esf2 gene.","definition_xrefs":["UniProtKB:O74362","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.05","synonyms":[{"name":"18S rRNA factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-esf2","type":"exact"}],"termid":"PR:O74362"}


id: MONDO:0800156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the metabolism of ornithine, proline and/or hydroxyproline.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of ornithine, proline and hydroxyproline metabolism","termid":"MONDO:0800156","xrefs":{"Monarch":{"xref_id":"0800156"}}}


id: PBO:0057065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 147b","termid":"PBO:0057065"}


id: PBO:0083718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein with chaperone and co-chaperone activity; involved in retention of resident ER proteins; has a role in recognizing proteins targeted for ER-associated degradation (ERAD), member of the protein disulfide isomerase family","termid":"PBO:0083718"}


id: PBO:0066245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 2","termid":"PBO:0066245"}


id: GO:0047043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lithocholate + NAD+ = 3-oxo-5beta-cholanate + H+ + NADH.","definition_xrefs":["RHEA:19585","EC:1.1.1.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-alpha-hydroxycholanate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04139","MetaCyc:1.1.1.52-RXN"],"synonyms":[{"name":"3alpha-hydroxy-5beta-cholanate:NAD+ oxidoreductase activity","type":"related"},{"name":"3alpha-hydroxycholanate dehydrogenase activity","type":"related"},{"name":"alpha-hydroxy-cholanate dehydrogenase activity","type":"related"}],"termid":"GO:0047043"}


id: GO:0010416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an arabinoxylan, a polymer containing a beta-1,4-linked D-xylose backbone decorated with arabinose side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"arabinoxylan-containing compound metabolic process","synonyms":[{"name":"arabinoxylan metabolic process","type":"related"},{"name":"arabinoxylan metabolism","type":"related"}],"termid":"GO:0010416"}


id: PBO:0012834
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens HRAS","termid":"PBO:0012834"}


id: PR:Q9HGK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A homologous-pairing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15938:SF0","OMA:SCHPO00387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous-pairing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.15","secondary_identifiers":["UniProtKB:Q9HGK2"],"synonyms":[{"name":"Spom972h-PSMC3IP","type":"exact"},{"name":"meiotic expression up-regulated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGK2"}


id: PBO:0003813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop6 (predicted)","termid":"PBO:0003813"}


id: GO:0015056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the corticotrophin-releasing factor family of ligands, including the urocortins, to initiate a change in cell activity.","definition_xrefs":["PMID:12032352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"corticotrophin-releasing factor receptor activity","termid":"GO:0015056"}


id: PR:Q10205
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP43 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03662","PANTHER:PTHR11097:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.03c","secondary_identifiers":["UniProtKB:Q10205"],"synonyms":[{"name":"Spom972h-EXOSC8","type":"exact"},{"name":"ribosomal RNA-processing protein 43 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10205"}


id: PBO:0036531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation release factor class II eRF3","termid":"PBO:0036531"}


id: MONDO:1012916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis that occurs in pigs due to a mutation in the TARDBP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis, non-human animal","termid":"MONDO:1012954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, TARDBP-related, pig","secondary_identifiers":["OMIA:002492-9823"],"termid":"MONDO:1012916","xrefs":{"Monarch":{"xref_id":"1012916"}}}


id: GO:1904594
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["GOC:TermGenie","PMID:25417108","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"regulation of transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904594","terms_by_termid":{"GO:1904595":null}}


id: MONDO:1010432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis, non-human animal","termid":"MONDO:1010008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis, pig","secondary_identifiers":["OMIA:000080-9823"],"termid":"MONDO:1010432","xrefs":{"Monarch":{"xref_id":"1010432"}}}


id: GO:0120104
data:
  {"annotated_genes":["SJAG_00938","SJAG_02737","SJAG_03596","SJAG_00663","SJAG_01114","SJAG_03703","SJAG_04375","SJAG_04498","SJAG_03145","SJAG_00279","SJAG_01143","SJAG_04077","SJAG_01277","SJAG_03374","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78591,80104,92662,97974,98222,98353,100436,101278,104235,107358,108443,109371,117234,117328,118173],"is_not":false,"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring adjacent to the plasma membrane where membrane bound scaffolds are located.","definition_xrefs":["GOC:vw","GOC:krc","PMID:28914606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00663":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_02431":null,"SJAG_02737":null,"SJAG_03145":null,"SJAG_03374":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04375":null,"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0070938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0005737","GO:0070938","GO:0005938"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, proximal layer","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, proximal layer","type":"exact"}],"termid":"GO:0120104","terms_by_termid":{"GO:0120104":null}}


id: PBO:0069962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1256, pseudogene","termid":"PBO:0069962"}


id: PBO:0067805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 107","termid":"PBO:0067805"}


id: PR:O13877
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23413:SF2","PRO:DNx","OMA:SCHPO02059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.12c","secondary_identifiers":["UniProtKB:O13877"],"synonyms":[{"name":"ABC10-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2L","type":"exact"}],"termid":"PR:O13877"}


id: PBO:0109017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 19, pseudogene","termid":"PBO:0109017"}


id: MONDO:0023149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Clostridium infectious disease","termid":"MONDO:0024388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infection due to clostridium perfringens","secondary_identifiers":["SCTID:65154009","NORD:1922","UMLS:C0275619","MEDGEN:546696"],"synonyms":[{"name":"C. perfringens infection","type":"related"},{"name":"Clostridial Myonecrosis","type":"exact"},{"name":"Clostridium perfringens Infection","type":"related"},{"name":"Clostridium perfringens Infections","type":"related"},{"name":"Clostridium perfringens infection","type":"related"},{"name":"Infection caused by Clostridium perfringens","type":"related"},{"name":"Infection due to Clostridium perfringens","type":"related"},{"name":"Infection, Clostridium perfringens","type":"related"},{"name":"Infections, Clostridium perfringens","type":"related"}],"termid":"MONDO:0023149","xrefs":{"Monarch":{"xref_id":"0023149"}}}


id: GO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of one or more iodine atoms to an amino acid residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein iodination (obsolete GO:0018077)","synonyms":[{"name":"protein amino acid iodination","type":"exact"}],"termid":"GO:0018077"}


id: PBO:0080199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 7","termid":"PBO:0080199"}


id: PBO:0049653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 7","termid":"PBO:0049653"}


id: MONDO:0009121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Voss-Cherstvoy syndrome is a very rare disorder with phocomelia of upper limbs, encephalocele, variable brain anomalies, urogenital abnormalities, and thrombocytopenia.","definition_xrefs":["Orphanet:3439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Voss-Cherstvoy syndrome","secondary_identifiers":["SCTID:719021005","UMLS:C1857226","MESH:C565618","GARD:1894","MEDGEN:341728","OMIM:223340"],"synonyms":[{"name":"DK phocomelia syndrome","type":"exact"},{"name":"Von Voss Cherstvoy syndrome","type":"related"},{"name":"phocomelia thrombocytopenia encephalocele and urogenital malformations","type":"related"},{"name":"phocomelia, thrombocytopenia, encephalocele, urogenital malformations","type":"related"},{"name":"phocomelia-thrombocytopenia-encephalocele-urogenital malformations syndrome","type":"exact"},{"name":"von Voss-Cherstvoy syndrome","type":"exact"}],"termid":"MONDO:0009121","xrefs":{"Monarch":{"xref_id":"0009121"}}}


id: PBO:0049917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif 2","termid":"PBO:0049917"}


id: PBO:0050258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 36","termid":"PBO:0050258"}


id: PBO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase involved in NADPH regeneration (predicted)","termid":"PBO:0017759"}


id: FYPO:0005264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dithiothreitol than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002682"],"is_obsolete":false,"name":"resistance to dithiothreitol","synonyms":[{"name":"resistance to 1,4-dithiothreitol","type":"exact"},{"name":"resistance to dithiothreitol during mitotic cell cycle","type":"related"},{"name":"resistance to dithiothreitol during vegetative growth","type":"exact"},{"name":"resistant to DTT","type":"exact"},{"name":"resistant to dithiothreitol","type":"exact"}],"termid":"FYPO:0005264"}


id: GO:2000830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of parathyroid hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of parathyroid hormone secretion","termid":"GO:2000828"},{"relation_name":"positively_regulates","term_name":"parathyroid hormone secretion","termid":"GO:0035898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of parathyroid hormone secretion","synonyms":[{"name":"positive regulation of PTH secretion","type":"exact"},{"name":"positive regulation of parathormone secretion","type":"exact"},{"name":"positive regulation of parathyrin secretion","type":"exact"}],"termid":"GO:2000830"}


id: MONDO:0016493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete variant of Guillain-Barre syndrome (obsolete MONDO:0016493)","secondary_identifiers":["Orphanet:231413"],"synonyms":[{"name":"variant of GBS","type":"exact"},{"name":"variant of Guillain-Barré syndrome","type":"related"}],"termid":"MONDO:0016493","xrefs":{"Monarch":{"xref_id":"0016493"}}}


id: PBO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine/pyridoxine/pyridoxal transmembrane transporter (predicted)","termid":"PBO:0005764"}


id: GO:0042945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of D-serine from one side of a membrane to the other. D-serine is the D-enantiomer of 2-amino-3-hydroxypropanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:jl","GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"D-serine transmembrane transporter activity","synonyms":[{"name":"D-serine permease activity","type":"exact"},{"name":"D-serine transporter activity","type":"broad"}],"termid":"GO:0042945"}


id: GO:0072058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the outer stripe over time, from its formation to the mature structure. The outer stripe is the region of the kidney outer medulla that lies just below the cortex. The proximal straight tubules (S3) characterize this region.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"renal outer medulla development","termid":"GO:0072054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer stripe development","termid":"GO:0072058"}


id: PBO:0081429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 283","termid":"PBO:0081429"}


id: PBO:0040373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 1","termid":"PBO:0040373"}


id: PBO:0072123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a","termid":"PBO:0072123"}


id: PBO:0081233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 15","termid":"PBO:0081233"}


id: MONDO:0043339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paralytic condition of the legs caused by ingestion of lathyrogens, especially beta-aminopropionitrile or beta-N-oxalyl amino-L-alanine, which are found in the seeds of plants of the genus lathyrus.","definition_xrefs":["MESH:D007842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lathyrism","secondary_identifiers":["SCTID:5724005"],"synonyms":[{"name":"Lathyrus species poisoning","type":"exact"},{"name":"Neurolathyrism","type":"related"},{"name":"lathyrism","type":"exact"},{"name":"vetchling poisoning","type":"related"}],"termid":"MONDO:0043339","xrefs":{"Monarch":{"xref_id":"0043339"}}}


id: GO:0106140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P-TEFb complex.","definition_xrefs":["PMID:18391197","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"P-TEFb complex binding","termid":"GO:0106140"}


id: PBO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H","termid":"PBO:0042896"}


id: FYPO:0007755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during metaphase of meiosis I.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0000120","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"short meiotic spindle during metaphase I","synonyms":[{"name":"short meiosis I spindle during metaphase","type":"exact"},{"name":"short spindle during meiotic metaphase I","type":"exact"},{"name":"short spindle during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007755"}


id: MONDO:0020725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia due to a disorder that is persistent or long-standing in nature.","definition_xrefs":["NCIT:C35659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia due to chronic disorder","secondary_identifiers":["MEDGEN:507442","UMLS:C0002873","ICD9:285.29","SCTID:234347009"],"synonyms":[{"name":"Secondary anaemia","type":"related"},{"name":"Secondary anemia","type":"related"},{"name":"anaemia due to Chronic Disorder","type":"related"},{"name":"anaemia of chronic disease","type":"exact"},{"name":"anaemia of chronic disorder","type":"related"},{"name":"anaemia of chronic illness","type":"exact"},{"name":"anaemia of chronic inflammation","type":"exact"},{"name":"anaemia of systemic disease","type":"related"},{"name":"anemia due to Chronic Disorder","type":"related"},{"name":"anemia due to chronic disorder","type":"exact"},{"name":"anemia of chronic disease","type":"exact"},{"name":"anemia of chronic disorder","type":"related"},{"name":"anemia of chronic illness","type":"exact"},{"name":"anemia of chronic inflammation","type":"exact"},{"name":"anemia of systemic disease","type":"related"}],"termid":"MONDO:0020725","xrefs":{"Monarch":{"xref_id":"0020725"}}}


id: GO:0071093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to fibronectin and tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha5-beta1 integrin-fibronectin-tissue transglutaminase complex","synonyms":[{"name":"ITGA5-ITGB1-FN1-TGM2 complex","type":"narrow"}],"termid":"GO:0071093"}


id: GO:0006791
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary sulfur sources and then activates genes to scavenge the last traces of the primary sulfur source and to transport and metabolize alternate sulfur sources. The utilization process begins when the cell or organism detects sulfur levels, includes the activation of genes whose products detect, transport or metabolize sulfur-containing compounds, and ends when the sulfur is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfur utilization","synonyms":[{"name":"sulphur utilization","type":"exact"}],"termid":"GO:0006791"}


id: FYPO:0003371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PMID:18256290","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to actomyosin contractile ring","termid":"FYPO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm","synonyms":[{"name":"abolished protein localisation to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actomyosin contractile ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to cytokinetic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein localization to mitotic contractile ring, with protein mislocalized to cytoplasm","type":"exact"},{"name":"abolished protein recruitment to actomyosin contractile ring, with protein mislocalized to cytoplasm","type":"related"},{"name":"protein localization to actomyosin contractile ring abolished, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0003371"}


id: PBO:0060304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12A pseudogene 1","termid":"PBO:0060304"}


id: GO:0072398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A signal transduction process that contributes to a cytokinesis checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction involved in cytokinesis checkpoint","secondary_identifiers":["GO:0072419"],"termid":"GO:0072398"}


id: PBO:0043798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis and planar polarity effector complex subunit 1","termid":"PBO:0043798"}


id: PBO:0058330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4704","termid":"PBO:0058330"}


id: GO:0106100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of geranylgeranyl pyrophosphate (GGPP) to yield the monocyclic diterpene beta-pinacene.","definition_xrefs":["GOC:rjd","PMID:28696553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"beta-pinacene synthase activity","termid":"GO:0106100"}


id: PBO:0043819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine family member 9","termid":"PBO:0043819"}


id: PBO:0066755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 53","termid":"PBO:0066755"}


id: MONDO:0000480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal dystonia of the pelvic floor muscles during attempted defecation.","definition_xrefs":["Wikipedia:Anismus"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"anismus","secondary_identifiers":["MEDGEN:540810","DOID:0050839","UMLS:C0267601","ICD9:569.49","SCTID:83605009"],"synonyms":[{"name":"anal region skeletal muscle focal dystonia","type":"exact"},{"name":"dyskinetic puborectalis","type":"related"},{"name":"dyssynergic defecation","type":"related"},{"name":"focal dystonia of anal region skeletal muscle","type":"exact"},{"name":"puborectalis syndrome","type":"related"},{"name":"rectosphincteric dyssynergia","type":"related"},{"name":"spastic pelvic floor syndrome","type":"related"},{"name":"sphincteric disobedience syndrome","type":"related"}],"termid":"MONDO:0000480","xrefs":{"Monarch":{"xref_id":"0000480"}}}


id: MONDO:0013281
data:
  {"annotated_genes":["SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86542],"is_not":false,"summary":null,"term":"MONDO:0013281"}]},"cv_name":"mondo","definition":"COG4-CDG is an extremely rare form of CDG syndrome characterized clinically in the single reported case to date by seizures, some dysmorphic features, axial hyponia, slight peripheral hypertonia and hyperreflexia.","definition_xrefs":["Orphanet:263501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"defect in conserved oligomeric Golgi complex","termid":"MONDO:0017750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"COG4-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070262","MEDGEN:929221","SCTID:718751000","UMLS:C4303552","GARD:12412","OMIM:613489"],"synonyms":[{"name":"CDG IIj","type":"related"},{"name":"CDG syndrome type IIj","type":"exact"},{"name":"CDG-IIj","type":"exact"},{"name":"CDG2J","type":"exact"},{"name":"COG4-CDG","type":"exact"},{"name":"COG4-CDG (CDG-IIj)","type":"related"},{"name":"COG4-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIj","type":"exact"},{"name":"congenital disorder of glycosylation type 2j","type":"exact"},{"name":"congenital disorder of glycosylation type IIj","type":"exact"},{"name":"congenital disorder of glycosylation, type IIj","type":"related"}],"termid":"MONDO:0013281","terms_by_termid":{"MONDO:0013281":null},"xrefs":{"Monarch":{"xref_id":"0013281"}}}


id: GO:0018770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2Z,4Z,7-trienoate + H2O = 2-(4'-chlorophenyl)-3,3-dichloropropenoate + cis-2-Hydroxy-3-chloropenta-2,4-dienone + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-oxo-2-hydroxy-7-(4'-chlorophenyl)-3,8,8-trichloroocta-2E,4E,7-trienoate hydrolase activity (obsolete GO:0018770)","termid":"GO:0018770"}


id: FYPO:0005666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cytoskeleton during meiosis","synonyms":[{"name":"abnormal actin cytoskeleton during meiotic nuclear division","type":"exact"},{"name":"abnormal actin cytoskeleton physical object quality during meiosis","type":"exact"}],"termid":"FYPO:0005666"}


id: MONDO:0007846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KBG syndrome is a rare condition characterized by a typical facial dysmorphism, macrodontia of the upper central incisors, skeletal (mainly costovertebral) anomalies and developmental delay.","definition_xrefs":["Orphanet:2332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"KBG syndrome","secondary_identifiers":["NORD:1322","ICD9:759.89","GARD:82","MEDGEN:66317","UMLS:C0220687","OMIM:148050","DOID:14780","SCTID:711156009","icd11.foundation:465550090","MESH:C537015"],"synonyms":[{"name":"KBG syndrome","type":"exact"},{"name":"KBGS","type":"related"},{"name":"macrodontia, intellectual disability, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"macrodontia, mental retardation, characteristic facies, short stature, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, intellectual disability, and skeletal anomalies","type":"related"},{"name":"short stature, characteristic facies, macrodontia, mental retardation, and skeletal anomalies","type":"related"},{"name":"short stature-facial and skeletal anomalies-intellectual disability-macrodontia syndrome","type":"exact"}],"termid":"MONDO:0007846","xrefs":{"Monarch":{"xref_id":"0007846"}}}


id: MOD:00246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue to form glycine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:8895467","PubMed:8183941","ChEBI:21276","RESID:AA0241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"glycine thiazole-4-carboxylic acid","synonyms":[{"name":"2-(aminomethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-(azanylmethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Gly-Cys)","type":"exact"},{"name":"glycine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00246"}


id: PBO:0080974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 9","termid":"PBO:0080974"}


id: PBO:0056054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like 3 pre-mRNA splicing factor pseudogene 1","termid":"PBO:0056054"}


id: PBO:0071187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 28","termid":"PBO:0071187"}


id: GO:0040027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of development of the vulva. Vulval development is the process whose specific outcome is the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.","definition_xrefs":["GOC:ems","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vulval development","termid":"GO:0040028"},{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"negatively_regulates","term_name":"vulval development","termid":"GO:0040025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vulval development","synonyms":[{"name":"down regulation of vulval development","type":"exact"},{"name":"down-regulation of vulval development","type":"exact"},{"name":"downregulation of vulval development","type":"exact"},{"name":"inhibition of vulval development","type":"narrow"}],"termid":"GO:0040027"}


id: GO:1904442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:17646383","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of thyroid gland epithelial cell proliferation","termid":"GO:1904441"},{"relation_name":"negatively_regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"down regulation of Hurthle cell proliferation","type":"narrow"},{"name":"down regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"down regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"down-regulation of Hurthle cell proliferation","type":"narrow"},{"name":"down-regulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"down-regulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"downregulation of Hurthle cell proliferation","type":"narrow"},{"name":"downregulation of thyroid follicular cell proliferation","type":"narrow"},{"name":"downregulation of thyroid gland epithelial cell proliferation","type":"exact"},{"name":"inhibition of Hurthle cell proliferation","type":"narrow"},{"name":"inhibition of thyroid follicular cell proliferation","type":"narrow"},{"name":"inhibition of thyroid gland epithelial cell proliferation","type":"narrow"},{"name":"negative regulation of Hurthle cell proliferation","type":"narrow"},{"name":"negative regulation of thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1904442"}


id: PBO:0040105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 1","termid":"PBO:0040105"}


id: PBO:0082576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin transglycosylase; functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans in the cell wall; similar and functionally redundant to Utr2; localizes to sites of polarized growth; expression induced by cell wall stress","termid":"PBO:0082576"}


id: PBO:0055070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2487","termid":"PBO:0055070"}


id: MONDO:0017495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence of upper arm and forearm with hand present, bilateral (obsolete MONDO:0017495)","secondary_identifiers":["ICD10CM:Q71.13","Orphanet:295087"],"synonyms":[{"name":"humero-radio-ulnar intercalary transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017495","xrefs":{"Monarch":{"xref_id":"0017495"}}}


id: PBO:0111893
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC domain protein","termid":"PBO:0111893"}


id: PBO:0042046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 102B","termid":"PBO:0042046"}


id: PBO:0054268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1654","termid":"PBO:0054268"}


id: FYPO:0007724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ERMES foci in a cell are normal (i.e. indistinguishable from wild type) in number, size, and distribution. An ERMES focus is a site that contains one or more ERMES complex(es).","definition_xrefs":["PMID:33483504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal ERMES foci","synonyms":[{"name":"normal ERMES foci during mitotic cell cycle","type":"related"},{"name":"normal ERMES foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007724"}


id: PBO:0091270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3","termid":"PBO:0091270"}


id: PBO:0061587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"netrin G2","termid":"PBO:0061587"}


id: PBO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO1 receptor, JUNO","termid":"PBO:0051974"}


id: PR:Q9US54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.04c","synonyms":[{"name":"Spom972h-taf11","type":"exact"},{"name":"TBP-associated factor 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9US54"}


id: PBO:0047647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4","termid":"PBO:0047647"}


id: GO:0120295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutaminyl-[histone] + serotonin = 5-serotonyl-L-glutamyl-[histone] + NH4(+).","definition_xrefs":["GOC:sp","PMID:30867594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide serotonyltransferase activity","termid":"GO:0120294"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"histone serotonyltransferase activity","termid":"GO:0120295"}


id: GO:0120158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collagen catabolism. Collagen catabolism is the proteolytic chemical reactions and pathways resulting in the breakdown of collagen in the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of collagen catabolic process","termid":"GO:0010710"},{"relation_name":"is_a","term_name":"positive regulation of collagen metabolic process","termid":"GO:0010714"},{"relation_name":"positively_regulates","term_name":"collagen catabolic process","termid":"GO:0030574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collagen catabolic process","synonyms":[{"name":"activation of collagen catabolic process","type":"narrow"},{"name":"positive regulation of collagen breakdown","type":"exact"},{"name":"positive regulation of collagen catabolism","type":"exact"},{"name":"positive regulation of collagen degradation","type":"exact"},{"name":"up regulation of collagen catabolic process","type":"exact"},{"name":"up-regulation of collagen catabolic process","type":"exact"},{"name":"upregulation of collagen catabolic process","type":"exact"}],"termid":"GO:0120158"}


id: GO:0039502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type I interferon-mediated signaling in the host organism. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["PMID:33097660","GOC:sp","PMID:19802576","PMID:26712804","GOC:bf","GOC:add","PMID:32464097","PMID:32733001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type I interferon-mediated signaling pathway","secondary_identifiers":["VZ:883"],"synonyms":[{"name":"inhibition of host interferon signaling pathway by virus","type":"related"},{"name":"negative regulation by virus of host type I interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type I IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type I interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0039502"}


id: MONDO:0023577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis","termid":"MONDO:0001008"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Krieble Bixler syndrome","secondary_identifiers":["UMLS:C2931550","MEDGEN:419107","MESH:C537619"],"synonyms":[{"name":"autosomal dominant blepharophimosis with multiple congenital anomalies","type":"related"}],"termid":"MONDO:0023577","xrefs":{"Monarch":{"xref_id":"0023577"}}}


id: GO:0075055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of symbiont penetration peg formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"modulation of penetration peg formation","termid":"GO:0075054"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"positively_regulates","term_name":"penetration peg formation","termid":"GO:0075053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of penetration peg formation","secondary_identifiers":["GO:0075059"],"synonyms":[{"name":"positive regulation of symbiont penetration peg formation for entry into host","type":"narrow"},{"name":"positive regulation of symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075055"}


id: GO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by symbiont","termid":"GO:0052460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by symbiont","synonyms":[{"name":"activation by host of nutrient release from symbiont","type":"narrow"},{"name":"positive regulation by host of nutrient release from symbiont","type":"exact"},{"name":"promotion of nutrient release from symbiont","type":"exact"},{"name":"stimulation by host of nutrient release from symbiont","type":"narrow"},{"name":"up regulation by host of nutrient release from symbiont","type":"exact"},{"name":"up-regulation by host of nutrient release from symbiont","type":"exact"},{"name":"upregulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052519"}


id: PBO:0066925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 227","termid":"PBO:0066925"}


id: MONDO:0008285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyps, multiple and recurrent inflammatory fibroid, gastrointestinal","secondary_identifiers":["MESH:C566774","OMIM:175510","MEDGEN:1677803","GARD:15106","UMLS:C5193005"],"synonyms":[{"name":"gastrointestinal stromal tumor/GIST-plus syndrome, somatic or familial","type":"exact"},{"name":"polyps, multiple and recurrent inflammatory fibroid, gastrointestinal","type":"exact"}],"termid":"MONDO:0008285","xrefs":{"Monarch":{"xref_id":"0008285"}}}


id: GO:0006172
data:
  {"annotated_genes":["SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72269],"is_not":false,"summary":null,"term":"GO:0006172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ADP, adenosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate biosynthetic process","termid":"GO:0009180"},{"relation_name":"is_a","term_name":"ADP metabolic process","termid":"GO:0046031"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ADP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ADP anabolism","type":"exact"},{"name":"ADP biosynthesis","type":"exact"},{"name":"ADP formation","type":"exact"},{"name":"ADP synthesis","type":"exact"}],"termid":"GO:0006172","terms_by_termid":{"GO:0006172":null}}


id: PBO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere localized protein Cnl2","termid":"PBO:0001052"}


id: GO:0047677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8R,9E,11Z,14Z)-8-hydroperoxyicosa-5,9,11,14-tetraenoate.","definition_xrefs":["EC:1.13.11.40","RHEA:14985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate 8(R)-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R01594","MetaCyc:ARACHIDONATE-8-LIPOXYGENASE-RXN"],"synonyms":[{"name":"8(R)-lipoxygenase activity","type":"related"},{"name":"8-lipoxygenase activity","type":"narrow"},{"name":"arachidonate 8-lipoxygenase activity","type":"broad"},{"name":"arachidonate:oxygen 8-oxidoreductase activity","type":"related"}],"termid":"GO:0047677"}


id: PBO:0077711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 1","termid":"PBO:0077711"}


id: PBO:0079387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 2B class IIb pseudogene 1","termid":"PBO:0079387"}


id: PBO:0075158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 14","termid":"PBO:0075158"}


id: GO:0052105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of host processes resulting in the thickening of its cell walls, occurring as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of defense-related host cell wall thickening (obsolete GO:0052105)","synonyms":[{"name":"activation by organism of defense-related host cell wall thickening","type":"exact"},{"name":"activation by organism of host defensive cell wall thickening","type":"exact"},{"name":"activation by symbiont of defense-related host cell wall thickening","type":"exact"},{"name":"induction by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by organism of host defensive cell wall thickening","type":"exact"},{"name":"positive regulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of host defensive cell wall thickening","type":"related"},{"name":"positive regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"stimulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"up-regulation by symbiont of defense-related host cell wall thickening","type":"related"},{"name":"upregulation by symbiont of defense-related host cell wall thickening","type":"related"}],"termid":"GO:0052105"}


id: FYPO:0006977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abnormal protein ubiquitination","synonyms":[{"name":"abnormal protein ubiquitinylation","type":"related"},{"name":"abnormal protein ubiquitylation","type":"exact"}],"termid":"FYPO:0006977"}


id: GO:0034669
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha4 subunit and one beta7 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alpha4-beta7 complex","synonyms":[{"name":"ITGA4-ITGB7 complex","type":"narrow"},{"name":"alpha4-beta7 integrin complex","type":"exact"}],"termid":"GO:0034669"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: MONDO:1010821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, sheep","secondary_identifiers":["OMIA:000810-9940"],"termid":"MONDO:1010821","xrefs":{"Monarch":{"xref_id":"1010821"}}}


id: GO:0004874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an aryl hydrocarbon and transmitting the signal to initiate a change in cell activity. The aryl hydrocarbon receptor is a ligand-activated transcription factor which translocates to the nucleus to activate transcription upon ligand-binding.","definition_xrefs":["Wikipedia:Aryl_hydrocarbon_receptor","PMID:1325649","PMID:7493958","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor activity (obsolete GO:0004874)","termid":"GO:0004874"}


id: GO:0043556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"part_of","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translation in response to oxidative stress","termid":"GO:0043556"}


id: MONDO:0015883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hidrotic ectodermal dysplasia, Halal type is a form of ectodermal dysplasia syndrome characterized by trichodysplasia, with absent eyebrows and eyelashes, onychodysplasia, mild retrognathia, abnormal dermatoglyphics (excess of whorls on fingertips, radial loop on finger, hypothenar pattern), intellectual disability and normal teeth and sweating. Additional variable manifestations include high implanted or prominent ears, mild hearing loss, supernumerary nipple, cafC)-au-lait spots, keratosis pilaris, and irregular menses. To date, four individuals from 2 generations of a consanguineous family of Portuguese descent have been described in the literature. Males and females were equally affected. Hidrotic ectodermal dysplasia, Halal type is inherited in an autosomal recessive manner.","definition_xrefs":["Orphanet:1809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidrotic ectodermal dysplasia, Halal type","secondary_identifiers":["MEDGEN:443941","MESH:C535621","SCTID:721147000","UMLS:C2930953","icd11.foundation:1668450131","GARD:280"],"synonyms":[{"name":"Halal Setton Wang syndrome","type":"related"},{"name":"Halal-Setton-Wang syndrome","type":"exact"},{"name":"ectodermal dysplasia with skin anomalies and intellectual disability","type":"exact"},{"name":"hidrotic ectodermal dysplasia Halal type","type":"related"},{"name":"trichodysplasia-abnormal dermatoglyphics-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0015883","xrefs":{"Monarch":{"xref_id":"0015883"}}}


id: MONDO:0018074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete American trypanosomiasis (obsolete MONDO:0018074)","termid":"MONDO:0018074","xrefs":{"Monarch":{"xref_id":"0018074"}}}


id: GO:0034605
data:
  {"annotated_genes":["SJAG_03319","SJAG_02266","SJAG_03949","SJAG_04082","SJAG_04567","SJAG_02381","SJAG_00436","SJAG_04388","SJAG_01186","SJAG_02426","SJAG_03527","SJAG_03815","SJAG_04187","SJAG_01584","SJAG_04055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89182,91150,92425,96023,96812,100859,105318,105602,110313,110314,115799,115800],"is_not":false,"summary":null,"term":"GO:0034605"},{"annotations":[79413,104635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[73543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to heat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3371556"],"synonyms":[{"name":"cellular response to heat stress","type":"exact"}],"termid":"GO:0034605","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: PBO:0060272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 7","termid":"PBO:0060272"}


id: MONDO:0859597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system neuroblastoma that is characterized by FOXR2 activation and that is composed of small, round cells with hyperchromatic nuclei surrounded by a clear halo.","definition_xrefs":["DOID:0080906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral neuroblastoma","termid":"MONDO:0002900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cns neuroblastoma with FOXR2 activation","secondary_identifiers":["NCIT:C186547"],"termid":"MONDO:0859597","xrefs":{"Monarch":{"xref_id":"0859597"}}}


id: GO:2001244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic signaling pathway","termid":"GO:2001235"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-111453"],"synonyms":[{"name":"positive regulation of intrinsic apoptosis","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"positive regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"positive regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001244"}


id: MONDO:0010678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, progressive Pectorodorsal","secondary_identifiers":["OMIM:310095","MEDGEN:326550","MESH:C564095","UMLS:C1839669"],"synonyms":[{"name":"muscular dystrophy, progressive Pectorodorsal","type":"exact"},{"name":"muscular dystrophy, progressive, involving shoulder girdle and back","type":"related"}],"termid":"MONDO:0010678","xrefs":{"Monarch":{"xref_id":"0010678"}}}


id: MONDO:0013344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any migraine disorder in which the cause of the disease is a mutation in the KCNK18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, with or without aura, susceptibility to, 13","secondary_identifiers":["UMLS:C4225479","MEDGEN:900808","OMIM:613656"],"synonyms":[{"name":"KCNK18 migraine disorder","type":"exact"},{"name":"MGR13","type":"related"},{"name":"migraine disorder caused by mutation in KCNK18","type":"exact"},{"name":"migraine with or without aura, susceptibility to, 13","type":"related"},{"name":"migraine, with or without aura, susceptibility to, 13","type":"exact"},{"name":"migraine, with or without aura, susceptibility to, type 13","type":"exact"},{"name":"susceptibility to migraine with or without aura 13","type":"related"}],"termid":"MONDO:0013344","xrefs":{"Monarch":{"xref_id":"0013344"}}}


id: GO:0106161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["GOC:ha","PMID:29775584"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of small RNA loading onto RISC (obsolete GO:0106161)","termid":"GO:0106161"}


id: PBO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.-","termid":"PBO:0001248"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: PBO:0017986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid transmembrane transporter Fnx1","termid":"PBO:0017986"}


id: MONDO:0035649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"adult-onset Steinert myotonic dystrophy","secondary_identifiers":["GARD:22364","UMLS:C5680309","MEDGEN:1843180","ICD10CM:G71.1","Orphanet:589830"],"synonyms":[{"name":"Adult-onset Steinert disease","type":"exact"},{"name":"Adult-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035649","xrefs":{"Monarch":{"xref_id":"0035649"}}}


id: GO:0051235
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170","SJAG_01017","SJAG_01001","SJAG_00368","SJAG_01116","SJAG_04221","SJAG_03850","SJAG_00661","SJAG_00030","SJAG_01738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90750,104693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[67138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[94362,100499,104972,111175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[92470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[108982],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[107345,115505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00053":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01738":null,"SJAG_03170":null,"SJAG_03850":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of location","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"maintenance of localization","type":"exact"},{"name":"retention","type":"narrow"},{"name":"sequestering","type":"narrow"},{"name":"storage","type":"narrow"}],"termid":"GO:0051235","terms_by_termid":{"GO:0006621":null,"GO:0032065":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:1990854":null}}


id: FYPO:0003596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is abnormal.","definition_xrefs":["PomBase:mah","GO:0034472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"abnormal snRNA 3'-end processing","synonyms":[{"name":"abnormal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003596"}


id: MONDO:0011986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tropical pancreatitis is a rare pancreatic disease of juvenile onset occurring mainly in tropical developing countries and characterized by chronic non-alcoholic pancreatitis manifesting with abdominal pain, steatorrhea and fibrocalculous pancreatopathy. It is also commonly associated with the development of pancreatic calculi and pancreatic cancer at a much higher frequency than seen in ordinary chronic pancreatitis.","definition_xrefs":["Orphanet:103918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary chronic pancreatitis","termid":"MONDO:0008185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"tropical pancreatitis","secondary_identifiers":["OMIM:608189","icd11.foundation:1645607956","GARD:16946","SCTID:724540009","UMLS:C1842402","MEDGEN:334069","MESH:C564276"],"synonyms":[{"name":"TCP","type":"exact"},{"name":"fibrocalculous pancreatic diabetes, susceptibility to","type":"related"},{"name":"tropical calcific chronic pancreatitis","type":"exact"},{"name":"tropical calcific pancreatitis","type":"related"}],"termid":"MONDO:0011986","xrefs":{"Monarch":{"xref_id":"0011986"}}}


id: GO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axonogenesis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"},{"relation_name":"is_a","term_name":"regulation of axonogenesis","termid":"GO:0050770"},{"relation_name":"negatively_regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axonogenesis","secondary_identifiers":["Reactome:R-HSA-193634"],"synonyms":[{"name":"down regulation of axonogenesis","type":"exact"},{"name":"down-regulation of axonogenesis","type":"exact"},{"name":"downregulation of axonogenesis","type":"exact"},{"name":"inhibition of axonogenesis","type":"narrow"}],"termid":"GO:0050771"}


id: GO:0004126
data:
  {"annotated_genes":["SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70177],"is_not":false,"summary":null,"term":"GO:0004126"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: cytidine + H+ + H2O = uridine + NH4 and deoxycytidine + H+ + H2O = deoxyuridine + NH4+.","definition_xrefs":["EC:3.5.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"cytidine deaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-73608","Reactome:R-HSA-83677","Reactome:R-HSA-9817513"],"synonyms":[{"name":"(deoxy)cytidine deaminase activity","type":"exact"},{"name":"cytidine aminohydrolase activity","type":"related"},{"name":"cytosine nucleoside deaminase activity","type":"related"},{"name":"deoxycytidine deaminase activity","type":"related"}],"termid":"GO:0004126","terms_by_termid":{"GO:0004126":null}}


id: GO:0005565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial tRNA (obsolete GO:0005565)","synonyms":[{"name":"mitochondrial tRNA","type":"exact"}],"termid":"GO:0005565"}


id: PBO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible splicing","termid":"PBO:0000215"}


id: MONDO:1012174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia, non-human animal","termid":"MONDO:1011849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myasthenia, Amur tiger","secondary_identifiers":["OMIA:000684-74533"],"termid":"MONDO:1012174","xrefs":{"Monarch":{"xref_id":"1012174"}}}


id: PBO:0040934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 5","termid":"PBO:0040934"}


id: PBO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Sod2","termid":"PBO:0000101"}


id: PBO:0116736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2","termid":"PBO:0116736"}


id: PBO:0024859
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along DNA/RNA duplex","termid":"PBO:0024859"}


id: GO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:dph","GOC:dms","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"positively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein glycosylation","synonyms":[{"name":"positive regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060050"}


id: PBO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 5","termid":"PBO:0060755"}


id: MONDO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A febrile illness characterized by chills, aches, vomiting, leukopenia, and sometimes encephalitis. It is caused by the colorado tick fever virus, a reovirus transmitted by the tick Dermacentor andersoni.","definition_xrefs":["MESH:D003121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Colorado tick fever","secondary_identifiers":["UMLS:C0009400","MedDRA:10010022","Orphanet:83595","DOID:4885","GARD:19042","ICD10CM:A93.2","icd11.foundation:951357413","ICD9:066.1","MEDGEN:40398","NORD:989","SCTID:6452009"],"synonyms":[{"name":"American mountain fever","type":"exact"},{"name":"Colorado tick encephalitis","type":"exact"},{"name":"Colorado tick fever virus caused disease or disorder","type":"exact"},{"name":"Colorado tick fever virus disease or disorder","type":"exact"},{"name":"Colorado tick fever virus infectious disease","type":"exact"},{"name":"Colorado tick-borne disease","type":"exact"},{"name":"Mountain fever","type":"exact"},{"name":"Mountain tick fever","type":"exact"},{"name":"Tick fever, American mountain","type":"exact"}],"termid":"MONDO:0005708","xrefs":{"Monarch":{"xref_id":"0005708"}}}


id: GO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an endothelial cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell development","termid":"GO:0001885"}


id: GO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine = pyruvate + NH3.","definition_xrefs":["EC:4.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-serine ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.17-RXN","RHEA:19169"],"synonyms":[{"name":"L-hydroxyaminoacid dehydratase activity","type":"broad"},{"name":"L-serine ammonia-lyase (pyruvate-forming) activity","type":"related"},{"name":"L-serine deaminase activity","type":"exact"},{"name":"L-serine dehydratase activity","type":"broad"},{"name":"L-serine dehydration activity","type":"related"},{"name":"L-serine hydro-lyase (deaminating) activity","type":"exact"},{"name":"serine deaminase activity","type":"broad"}],"termid":"GO:0003941"}


id: GO:0050679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of epithelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation","synonyms":[{"name":"activation of epithelial cell proliferation","type":"narrow"},{"name":"stimulation of epithelial cell proliferation","type":"narrow"},{"name":"up regulation of epithelial cell proliferation","type":"exact"},{"name":"up-regulation of epithelial cell proliferation","type":"exact"},{"name":"upregulation of epithelial cell proliferation","type":"exact"}],"termid":"GO:0050679"}


id: FYPO:0005854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin cables is increased.","definition_xrefs":["PomBase:mah","PMID:12764130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"increased actin cable assembly","synonyms":[{"name":"actin bundling increased","type":"related"},{"name":"increased actin bundling","type":"related"},{"name":"increased actin cable assembly during mitotic cell cycle","type":"related"},{"name":"increased actin cable assembly during vegetative growth","type":"exact"},{"name":"increased formin-nucleated actin cable assembly","type":"exact"}],"termid":"FYPO:0005854"}


id: GO:0015041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that is synthesized only under certain specific growth conditions and receives electrons from the oxidation of specific substrates, e.g. trimethylamine, carnitine and in nitrogen fixation.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group II (obsolete GO:0015041)","synonyms":[{"name":"electron transfer flavoprotein, group II","type":"exact"}],"termid":"GO:0015041"}


id: PBO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein, splicing factor Cdc5","termid":"PBO:0001680"}


id: PBO:0082352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-NADH kinase; phosphorylates both NAD and NADH; homooctameric structure consisting of 60-kDa subunits; similar to Pos5p; overexpression complements certain pos5 phenotypes; YEF1 has a paralog, UTR1, that arose from the whole genome duplication","termid":"PBO:0082352"}


id: PBO:0088011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II membrane protein required for vesicular transport; required for vesicular transport between the endoplasmic reticulum and Golgi complex; v-SNARE with similarity to synaptobrevins","termid":"PBO:0088011"}


id: MONDO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Good syndrome (obsolete MONDO:0000585)","termid":"MONDO:0000585","xrefs":{"Monarch":{"xref_id":"0000585"}}}


id: PBO:0116804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109D (gene/pseudogene)","termid":"PBO:0116804"}


id: GO:1901576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance biosynthetic process (obsolete GO:1901576)","synonyms":[{"name":"organic molecular entity anabolism","type":"exact"},{"name":"organic molecular entity biosynthesis","type":"exact"},{"name":"organic molecular entity biosynthetic process","type":"exact"},{"name":"organic molecular entity formation","type":"exact"},{"name":"organic molecular entity synthesis","type":"exact"},{"name":"organic substance anabolism","type":"exact"},{"name":"organic substance biosynthesis","type":"exact"},{"name":"organic substance formation","type":"exact"},{"name":"organic substance synthesis","type":"exact"}],"termid":"GO:1901576"}


id: PBO:0077297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM38B pseudogene 1","termid":"PBO:0077297"}


id: PBO:0042073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 142","termid":"PBO:0042073"}


id: GO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a hemidesmosome.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of hemidesmosome (obsolete GO:0061465)","termid":"GO:0061465"}


id: GO:0015856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytosine, 4-amino-2-hydroxypyrimidine, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cytosine transport","synonyms":[{"name":"cytosine transmembrane transport","type":"exact"}],"termid":"GO:0015856"}


id: GO:0033294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ectoine, 1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ectoine binding","termid":"GO:0033294"}


id: PBO:0052706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 7","termid":"PBO:0052706"}


id: GO:1904280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24726328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"negatively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of transcription by RNA polymerase V","synonyms":[{"name":"down regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"downregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"downregulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"inhibition of transcription from RNA pol V promoter","type":"narrow"},{"name":"inhibition of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"negative regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904280"}


id: FYPO:0003248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromere inner repeat regions is higher than normal.","definition_xrefs":["PMID:22291963","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone H3 at centromere inner repeat","synonyms":[{"name":"increased level of histone H3 at centromere imr","type":"exact"},{"name":"increased level of histone H3 at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased level of histone H3 at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003248"}


id: MONDO:0019891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome 22 disorder","termid":"MONDO:0700026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 22","secondary_identifiers":["GARD:19324","MEDGEN:208644","NCIT:C36461","Orphanet:96123","UMLS:C0795878"],"synonyms":[{"name":"Del(22)","type":"exact"},{"name":"deletion 22","type":"exact"},{"name":"monosomy type 22","type":"exact"}],"termid":"MONDO:0019891","xrefs":{"Monarch":{"xref_id":"0019891"}}}


id: MONDO:0004727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the oral opening.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oral cavity cancer","termid":"MONDO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"vestibule of mouth cancer","secondary_identifiers":["MEDGEN:509267","ICD9:145.1","SCTID:187658004","ICD10CM:C06.1","UMLS:C0153374","DOID:9188"],"synonyms":[{"name":"cancer of oral opening","type":"exact"},{"name":"malignant neoplasm of oral opening","type":"exact"},{"name":"malignant neoplasm of vestibule of mouth","type":"exact"},{"name":"malignant oral opening neoplasm","type":"exact"},{"name":"malignant tumor of vestibule of mouth","type":"exact"},{"name":"malignant tumour of vestibule of mouth","type":"exact"},{"name":"oral opening cancer","type":"exact"}],"termid":"MONDO:0004727","xrefs":{"Monarch":{"xref_id":"0004727"}}}


id: MONDO:0015516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, non-syndromic limb reduction defect disorder characterized by unilateral or bilateral brachydactyly, cutaneous syndactyly and global hypoplasia of the hand and/or foot, with underlying muscles, tendons, ligaments and bones being affected but without other associated limb anomalies. Patients typically present short, stiff, webbed or missing fingers and/or toes which are often replaced with small stumps (nubbins) with residual nails.","definition_xrefs":["Orphanet:1570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly","termid":"MONDO:0017424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbrachydactyly of hands and feet","secondary_identifiers":["UMLS:C2931719","GARD:1680","MEDGEN:419146","MESH:C538062","icd11.foundation:159463685"],"synonyms":[{"name":"De Smet-Fabry-Fryns syndrome","type":"exact"},{"name":"frints de Smet Fabry Fryns syndrome","type":"exact"},{"name":"symbrachydactyly of the hand and foot","type":"exact"}],"termid":"MONDO:0015516","xrefs":{"Monarch":{"xref_id":"0015516"}}}


id: GO:2000860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aldosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mineralocorticoid secretion","termid":"GO:2000857"},{"relation_name":"is_a","term_name":"regulation of aldosterone secretion","termid":"GO:2000858"},{"relation_name":"positively_regulates","term_name":"aldosterone secretion","termid":"GO:0035932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of aldosterone secretion","termid":"GO:2000860"}


id: MONDO:0009572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of familial Mediterranean fever.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"familial Mediterranean fever","termid":"MONDO:0018088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive familial Mediterranean fever","secondary_identifiers":["NANDO:1200864","OMIM:249100"],"synonyms":[{"name":"FMF","type":"related"},{"name":"autosomal recessive familial Mediterranean fever","type":"exact"},{"name":"familial MEDITERRANEAN FEVER","type":"related"},{"name":"familial Mediterranean fever","type":"related"},{"name":"familial Mediterranean fever, AR","type":"exact"},{"name":"familial Mediterranean fever, autosomal recessive","type":"exact"},{"name":"polyserositis, familial paroxysmal","type":"related"},{"name":"polyserositis, recurrent","type":"related"}],"termid":"MONDO:0009572","xrefs":{"Monarch":{"xref_id":"0009572"}}}


id: PBO:0054039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1375","termid":"PBO:0054039"}


id: MONDO:1010304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial chondromatosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial chondromatosis, non-human animal","secondary_identifiers":["OMIA:001174"],"termid":"MONDO:1010304","xrefs":{"Monarch":{"xref_id":"1010304"}}}


id: PBO:0034448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0034448"}


id: GO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 NAD+ + UDP-N-acetyl-alpha-D-glucosamine = 3 H+ + 2 NADH + UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate.","definition_xrefs":["RHEA:13325","EC:1.1.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 6-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00421","MetaCyc:1.1.1.136-RXN"],"synonyms":[{"name":"UDP-2-acetamido-2-deoxy-D-glucose:NAD oxidoreductase activity","type":"related"},{"name":"UDP-GLcNAc dehydrogenase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"UDPacetylglucosamine dehydrogenase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine dehydrogenase activity","type":"related"}],"termid":"GO:0047004"}


id: SO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide residues, of which the i+2 residue is proline, and that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth and is characterized by the dihedral angles: Residue(i+1): phi ~ -60 degrees, psi ~ 120 degrees. Residue(i+2): phi ~ -90 degrees, psi ~ 0 degrees.","definition_xrefs":["SO:cb","PMID:2371257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six","termid":"SO:0001150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_a","synonyms":[{"name":"beta turn type six a","type":"exact"},{"name":"type VIa beta turn","type":"exact"},{"name":"type VIa turn","type":"exact"}],"termid":"SO:0001151"}


id: PBO:0046016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 2","termid":"PBO:0046016"}


id: PBO:0029318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_at_subtelomere_during_mitotic_S_phase","termid":"PBO:0029318"}


id: PBO:0090382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRC complex (ER membrane insertion) subunit Get4","termid":"PBO:0090382"}


id: GO:0070709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of a guanosine nucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine insertion","synonyms":[{"name":"RNA G insertion","type":"exact"}],"termid":"GO:0070709"}


id: PBO:0040764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 2","termid":"PBO:0040764"}


id: GO:0035653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-1 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. The AP-1 adaptor protein complex is a component of the cytoplasmic coat found on clathrin-coated vesicles, and binds to sorting signals of cargo to facilitate their trafficking.","definition_xrefs":["PMID:16162817","PMID:12802059","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-1-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-1-mediated","type":"exact"}],"termid":"GO:0035653"}


id: MONDO:0013797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"17q12 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from the partial deletion of the long arm of chromosome 17 characterized by renal cystic disease, maturity onset diabetes of the young type 5, and neurodevelopmental disorders, such as cognitive impairment, developmental delay (particularly of speech), autistic traits and autism spectrum disorder. Mullerian aplasia in females, macrocephaly, mild facial dysmorphism (high forehead, deep set eyes and chubby cheeks) and transcient hypercalcaemia have also been reported.","definition_xrefs":["Orphanet:261265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17q12 deletion syndrome","secondary_identifiers":["DOID:0060404","SCTID:733519008","OMIM:614527","GARD:13297","UMLS:C3281138","MEDGEN:482768"],"synonyms":[{"name":"17q12 deletion syndrome","type":"related"},{"name":"17q12 microdeletion syndrome","type":"exact"},{"name":"17q12 recurrent deletion syndrome","type":"related"},{"name":"Del(17)(q12)","type":"exact"},{"name":"chromosome 17q12 deletion syndrome","type":"exact"},{"name":"monosomy 17q12","type":"exact"}],"termid":"MONDO:0013797","xrefs":{"Monarch":{"xref_id":"0013797"}}}


id: PR:Q9P7F8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATPase ASNA1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01516","PANTHER:PTHR10803:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase get3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.06","secondary_identifiers":["UniProtKB:Q9P7F8"],"synonyms":[{"name":"Golgi to ER traffic protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ASNA1","type":"exact"},{"name":"arsenical pump-driving ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"arsenite-stimulated ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"guided entry of tail-anchored proteins 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F8"}


id: GO:1901058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-hydroxyphenyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin metabolic process","termid":"GO:0009808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin metabolic process","synonyms":[{"name":"H-lignin metabolic process","type":"exact"},{"name":"p-hydroxyphenyl lignin metabolism","type":"exact"}],"termid":"GO:1901058"}


id: FYPO:0001246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"normal RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"normal RNA level during cellular response to H2O2","type":"exact"},{"name":"normal RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"normal transcript level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001246"}


id: PBO:0058560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6502","termid":"PBO:0058560"}


id: PBO:0041687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide beta","termid":"PBO:0041687"}


id: FYPO:0004852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects an RNA transport process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"RNA localization phenotype","termid":"FYPO:0004853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"RNA transport phenotype","termid":"FYPO:0004852"}


id: GO:1902244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cis-abienol.","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid metabolic process","termid":"GO:0016101"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cis-abienol metabolic process","synonyms":[{"name":"cis-abienol metabolism","type":"exact"}],"termid":"GO:1902244"}


id: PBO:0082471
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id: PBO:0063018
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 associated glutamate rich protein 1","termid":"PBO:0063018"}


id: PBO:0044212
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id: GO:0039015
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id: GO:0002659
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id: PBO:0091466
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id: PBO:0029945
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id: PBO:0116305
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id: PBO:0051826
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id: FYECO:0000267
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id: MONDO:0016921
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id: MONDO:0033614
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 83, autosomal recessive","secondary_identifiers":["MEDGEN:1759445","UMLS:C5436637","Orphanet:631076","OMIM:619027","DOID:0112346"],"synonyms":[{"name":"SPG83","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 83","type":"exact"}],"termid":"MONDO:0033614","xrefs":{"Monarch":{"xref_id":"0033614"}}}


id: PBO:0088886
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id: PBO:0087374
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id: GO:0031361
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id: PBO:0064321
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id: GO:0062014
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id: MONDO:0024237
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id: GO:1905542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-arginine import across plasma membrane.","definition_xrefs":["PMID:14718525","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-arginine import across plasma membrane","termid":"GO:1905541"},{"relation_name":"negatively_regulates","term_name":"L-arginine import across plasma membrane","termid":"GO:0097638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-arginine import across plasma membrane","secondary_identifiers":["GO:1902827"],"synonyms":[{"name":"down regulation of L-arginine import into cell","type":"exact"},{"name":"downregulation of L-arginine import into cell","type":"exact"},{"name":"inhibition of L-arginine import into cell","type":"narrow"},{"name":"negative regulation of L-arginine import into cell","type":"exact"}],"termid":"GO:1905542"}


id: PBO:0074972
data:
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id: PR:G2TRK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRK2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.22","synonyms":[{"name":"Spom972h-SPAC29A4.22","type":"exact"}],"termid":"PR:G2TRK2"}


id: PBO:0064792
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1K divergent transcript","termid":"PBO:0064792"}


id: PBO:0029536
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id: PBO:0086699
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; YCR101C is not an essential gene","termid":"PBO:0086699"}


id: MONDO:1010458
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, dog","secondary_identifiers":["OMIA:000515-9615"],"termid":"MONDO:1010458","xrefs":{"Monarch":{"xref_id":"1010458"}}}


id: PBO:0078882
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 5","termid":"PBO:0078882"}


id: PBO:0082234
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima4p overexpression allows the ima1 null mutant to grow on isomaltose; identical to IMA3","termid":"PBO:0082234"}


id: PATO:0001167
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being harmed or injured or spoiled, such that its functionality is impaired.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damage","termid":"PATO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damaged","termid":"PATO:0001167"}


id: MONDO:0017169
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple endocrine neoplasia (MEN) is a group of rare inherited cancer syndromes characterized by the development of two or more endocrine gland tumors, sometimes with tumor development in other tissues or organs.","definition_xrefs":["Orphanet:276161"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplastic syndrome","termid":"MONDO:0021058"},{"relation_name":"is_a","term_name":"multiple polyglandular tumor","termid":"MONDO:0015079"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple endocrine neoplasia","secondary_identifiers":["DOID:3125","MESH:D009377","MedDRA:10061299","NANDO:2100148","OMIMPS:131100","SCTID:46724008","MEDGEN:45036","UMLS:C0027662","NCIT:C6432","GARD:21044","ICDO:8360/1","ICD9:258.0"],"synonyms":[{"name":"MEN","type":"exact"},{"name":"men syndrome","type":"exact"},{"name":"men syndromes","type":"exact"},{"name":"multiple endocrine adenomatosis","type":"exact"},{"name":"multiple endocrine neoplasia","type":"exact"},{"name":"multiple endocrine neoplasia syndrome","type":"exact"},{"name":"multiple endocrine neoplasia syndrome(s)","type":"exact"}],"termid":"MONDO:0017169","xrefs":{"Monarch":{"xref_id":"0017169"}}}


id: MONDO:1011994
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoroquinolone-induced retinal degeneration, non-human animal","secondary_identifiers":["OMIA:001707"],"termid":"MONDO:1011994","xrefs":{"Monarch":{"xref_id":"1011994"}}}


id: PBO:0054528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1928","termid":"PBO:0054528"}


id: PBO:0039745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L domain containing 1","termid":"PBO:0039745"}


id: PBO:0028014
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_during_zygotic_meiosis","termid":"PBO:0028014"}


id: PR:O59700
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.03c","synonyms":[{"name":"Spom972h-mfs3","type":"exact"}],"termid":"PR:O59700"}


id: GO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the antiviral response of a cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus","synonyms":[{"name":"regulation of antiviral response","type":"exact"}],"termid":"GO:0050688"}


id: FYPO:0000037
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize cysteine, and therefore requires cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for sulfur-containing amino acid","termid":"FYPO:0003355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for cysteine","synonyms":[{"name":"cysteine auxotrophy","type":"exact"},{"name":"growth auxotrophic for cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for cysteine during vegetative growth","type":"exact"}],"termid":"FYPO:0000037"}


id: GO:0006790
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id: MONDO:0000089
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id: GO:0045029
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id: PBO:0083730
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id: PBO:0048785
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id: MONDO:0004473
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id: GO:0036205
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id: MONDO:1010604
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id: PATO:0000149
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id: PBO:0116228
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id: GO:1903315
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id: GO:2000843
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id: PBO:0058523
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id: PBO:0003273
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