# terms

id: GO:0034114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of heterotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"}


id: PBO:0008889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide matMc","termid":"PBO:0008889"}


id: GO:0005351
data:
  {"annotated_genes":["SJAG_03606","SJAG_03608","SJAG_04905","SJAG_02958","SJAG_03820","SJAG_04068","SJAG_00057","SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71266,73414,73551,73571,75171,76710],"is_not":false,"summary":null,"term":"GO:0005351"},{"annotations":[117509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[75918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: carbohydrate(out) + H+(out) = carbohydrate(in) + H+(in).","definition_xrefs":["TC:2.A.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02958":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"carbohydrate:proton symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005403","GO:0015542"],"synonyms":[{"name":"cation/sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar symporter activity","type":"narrow"},{"name":"hydrogen:sugar transporter activity","type":"broad"},{"name":"lactose/glucose efflux transporter activity","type":"narrow"},{"name":"proton:sugar symporter activity","type":"exact"},{"name":"sugar efflux transmembrane transporter activity","type":"narrow"},{"name":"sugar porter activity","type":"narrow"},{"name":"sugar transporter","type":"broad"},{"name":"sugar:hydrogen ion symporter activity","type":"narrow"},{"name":"sugar:hydrogen symporter activity","type":"exact"},{"name":"sugar:proton symporter activity","type":"narrow"}],"termid":"GO:0005351","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0008506":null}}


id: MONDO:0859327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 110","secondary_identifiers":["MEDGEN:1824038","UMLS:C5774265","DOID:0070395","OMIM:620149"],"termid":"MONDO:0859327","xrefs":{"Monarch":{"xref_id":"0859327"}}}


id: PBO:0082148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-coenzymeA:ethanol O-acyltransferase; responsible for the major part of medium-chain fatty acid ethyl ester biosynthesis during fermentation; possesses short-chain esterase activity; may be involved in lipid metabolism and detoxification; EEB1 has a paralog, EHT1, that arose from the whole genome duplication","termid":"PBO:0082148"}


id: PBO:0056414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF10 divergent transcript","termid":"PBO:0056414"}


id: PBO:0052609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB-A domain containing 2","termid":"PBO:0052609"}


id: PBO:0067902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 204","termid":"PBO:0067902"}


id: PBO:0061673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 58 pseudogene 1","termid":"PBO:0061673"}


id: PBO:0076053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STN1 subunit of CST complex","termid":"PBO:0076053"}


id: MONDO:0013603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 20, autosomal dominant","secondary_identifiers":["UMLS:C3279996","OMIM:614166","MEDGEN:481626"],"synonyms":[{"name":"MYP20","type":"exact"},{"name":"myopia 20, autosomal dominant","type":"exact"}],"termid":"MONDO:0013603","xrefs":{"Monarch":{"xref_id":"0013603"}}}


id: GO:0047243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + UDP-D-glucose = a flavanone 7-O-beta-D-glucoside + UDP.","definition_xrefs":["EC:2.4.1.185","MetaCyc:2.4.1.185-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"flavanone 7-O-beta-glucosyltransferase activity","synonyms":[{"name":"UDP-glucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:flavanone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"hesperetin 7-O-glucosyl-transferase activity","type":"related"},{"name":"naringenin 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-flavanone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0047243"}


id: FYPO:0006155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more mating mRNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Mating genes are normally transcribed during conjugation with cellular fusion (i.e. mating).","definition_xrefs":["PMID:19056896","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of mating gene mRNA during vegetative growth","synonyms":[{"name":"increased level of conjugation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene RNA during vegetative growth","type":"exact"},{"name":"increased level of mating gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of mating gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of mating with cellular fusion gene mRNA during vegetative growth","type":"exact"},{"name":"increased mating gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0006155"}


id: PBO:0041637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 D","termid":"PBO:0041637"}


id: GO:0033186
data:
  {"annotated_genes":["SJAG_02198","SJAG_02439","SJAG_04272"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73421,95155,108037],"is_not":false,"summary":null,"term":"GO:0033186"}]},"cv_name":"cellular_component","definition":"A conserved heterotrimeric protein complex that promotes histone H3 and H4 deposition onto newly synthesized DNA during replication or DNA repair; specifically facilitates replication-dependent nucleosome assembly with the major histone H3 (H3.1). In many species the CAF-1 subunits are designated p150, p60, and p48.","definition_xrefs":["PMID:17065558","PMID:17083276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02198":null,"SJAG_02439":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CAF-1 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromatin assembly factor 1 complex","type":"exact"}],"termid":"GO:0033186","terms_by_termid":{"GO:0033186":null}}


id: PBO:0060130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 31","termid":"PBO:0060130"}


id: PBO:0052028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JPT1 pseudogene 1","termid":"PBO:0052028"}


id: GO:2000523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell costimulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell activation","termid":"GO:0050863"},{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"T cell costimulation","termid":"GO:0031295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of T cell costimulation","synonyms":[{"name":"regulation of T cell co-stimulation","type":"exact"},{"name":"regulation of T lymphocyte costimulation","type":"exact"},{"name":"regulation of T-cell co-stimulation","type":"exact"},{"name":"regulation of T-cell costimulation","type":"exact"},{"name":"regulation of T-lymphocyte costimulation","type":"exact"}],"termid":"GO:2000523"}


id: SO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat at the ends of and within the sequence for which it has functional significance other than long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:terminal","type":"exact"},{"name":"terminal repeat","type":"exact"}],"termid":"SO:0002201"}


id: PBO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 11","termid":"PBO:0070305"}


id: PBO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 2 pseudogene 1","termid":"PBO:0061782"}


id: GO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that mediates transport from the Golgi to the endoplasmic reticulum.","definition_xrefs":["GOC:mah","PMID:22160157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"COPI-coated Golgi to ER transport vesicle","synonyms":[{"name":"Golgi to ER constitutive secretory pathway transport vesicle","type":"exact"},{"name":"Golgi to endoplasmic reticulum transport vesicle","type":"exact"},{"name":"Golgi-ER transport vesicle","type":"exact"},{"name":"Golgi-endoplasmic reticulum transport vesicle","type":"exact"},{"name":"retrograde transport vesicle","type":"exact"}],"termid":"GO:0030142"}


id: PBO:0028263
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_queuosine_level_in_tRNA","termid":"PBO:0028263"}


id: PBO:0029110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_process","termid":"PBO:0029110"}


id: GO:0099002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a short tail ejection system consisting a central tube, the connector which attaches the tail to the phage capsid and releases inner core proteins. Upon binding to the host cell surface, the phage displays a tube-like extension of its short tail that penetrates both host membranes. This tail extension comes from the release of viral core proteins with channel forming properties. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["GOC:dos","VZ:3954","PMID:22297513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, short tail mechanism","synonyms":[{"name":"viral genome ejection through host cell envelope, short tail mechanism","type":"related"},{"name":"viral short tail ejection system","type":"exact"}],"termid":"GO:0099002"}


id: FYPO:0006214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of spore germination is decreased when germination takes place under conditions of copper ion starvation.","definition_xrefs":["PomBase:mah","PMID:28572514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spore germination frequency","termid":"FYPO:0000581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased spore germination frequency during copper ion starvation","synonyms":[{"name":"decreased spore germination during copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during cellular response to copper ion starvation","type":"exact"},{"name":"decreased spore germination frequency during copper starvation","type":"exact"},{"name":"decreased spore viability during copper ion starvation","type":"related"},{"name":"reduced spore germination frequency during copper ion starvation","type":"exact"},{"name":"reduced spore viability during copper ion starvation","type":"related"}],"termid":"FYPO:0006214"}


id: PATO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a physical entity that exists through action of continuants at the physical level of organisation in relation to other entities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality","secondary_identifiers":["PATO:0002079","Wikipedia:Physical_property"],"synonyms":[{"name":"relational physical quality","type":"exact"}],"termid":"PATO:0001018"}


id: PBO:0072205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 4","termid":"PBO:0072205"}


id: PBO:0072073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 3","termid":"PBO:0072073"}


id: PBO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated like 2","termid":"PBO:0060700"}


id: MOD:02015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a linoloyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"linoloylated residue","termid":"MOD:02015"}


id: PR:O14045
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.12c","synonyms":[{"name":"Spom972h-tpt1","type":"exact"}],"termid":"PR:O14045"}


id: PBO:0038919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G1","termid":"PBO:0038919"}


id: GO:0008307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a muscle fiber.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of muscle","termid":"GO:0008307"}


id: PBO:0053699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 900","termid":"PBO:0053699"}


id: PBO:0000695
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.14","termid":"PBO:0000695"}


id: GO:0021540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the corpus callosum are generated and organized. The corpus callosum is a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres. It consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","ISBN:0838580343","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"},{"relation_name":"part_of","term_name":"corpus callosum development","termid":"GO:0022038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corpus callosum morphogenesis","termid":"GO:0021540"}


id: MONDO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatoid adenocarcinoma (obsolete MONDO:0000808)","termid":"MONDO:0000808","xrefs":{"Monarch":{"xref_id":"0000808"}}}


id: MONDO:0016527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase deficiency","secondary_identifiers":["UMLS:C5575057","GARD:3159","icd11.foundation:1092207912","MEDGEN:1805539","Orphanet:2364","MESH:C580233"],"synonyms":[{"name":"GSD due to lactate dehydrogenase deficiency","type":"exact"},{"name":"LDH deficiency","type":"exact"},{"name":"glycogenosis due to lactate dehydrogenase deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency","type":"related"}],"termid":"MONDO:0016527","xrefs":{"Monarch":{"xref_id":"0016527"}}}


id: PBO:0029633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exocytic_vesicles_present_in_increased_numbers_at_cell_tip_during_cell_growth","termid":"PBO:0029633"}


id: FYPO:0004754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle","termid":"FYPO:0003186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle during mitosis","synonyms":[{"name":"abolished protein localization to mitotic spindle during mitotic M phase","type":"related"},{"name":"abolished protein localization to mitotic spindle during mitotic M-phase","type":"related"},{"name":"abolished protein localization to mitotic spindle during mitotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during mitosis","type":"exact"},{"name":"protein absent from mitotic spindle during mitosis","type":"related"},{"name":"protein localisation to mitotic spindle abolished during mitosis","type":"exact"},{"name":"protein localization to mitotic spindle abolished during mitosis","type":"exact"},{"name":"protein localization to spindle abolished during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0004754"}


id: MONDO:0022890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis Fontaine type","secondary_identifiers":["GARD:1595"],"termid":"MONDO:0022890","xrefs":{"Monarch":{"xref_id":"0022890"}}}


id: PBO:0042802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine phosphotransferase 1","termid":"PBO:0042802"}


id: GO:1900799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cordyol C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"cordyol C metabolic process","termid":"GO:1900797"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"cordyol C biosynthetic process","synonyms":[{"name":"cordyol C anabolism","type":"exact"},{"name":"cordyol C biosynthesis","type":"exact"},{"name":"cordyol C formation","type":"exact"},{"name":"cordyol C synthesis","type":"exact"}],"termid":"GO:1900799"}


id: PBO:0028457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_morphology","termid":"PBO:0028457"}


id: FYPO:0003023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing ethyl N-phenylcarbamate (EPC).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0002057","FYPO:0002060","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on EPC","synonyms":[{"name":"normal cell population growth in presence of EPC","type":"exact"},{"name":"normal cell population growth on EPC","type":"exact"},{"name":"normal cell population growth on ethyl N-phenylcarbamate","type":"exact"},{"name":"normal cellular response to EPC","type":"related"},{"name":"normal vegetative cell population growth on EPC","type":"exact"}],"termid":"FYPO:0003023"}


id: PBO:0086250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that modulates the efficiency of translation termination; interacts with translation release factors eRF1 (Sup45p) and eRF3 (Sup35p) in vitro, contains a zinc finger domain characteristic of the TRIAD class of proteins","termid":"PBO:0086250"}


id: SO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The RNA component of Ribonuclease P (RNase P), a ubiquitous endoribonuclease, found in archaea, bacteria and eukarya as well as chloroplasts and mitochondria. Its best characterized activity is the generation of mature 5 prime ends of tRNAs by cleaving the 5 prime leader elements of precursor-tRNAs. Cellular RNase Ps are ribonucleoproteins. RNA from bacterial RNase Ps retains its catalytic activity in the absence of the protein subunit, i.e. it is a ribozyme. Isolated eukaryotic and archaeal RNase P RNA has not been shown to retain its catalytic function, but is still essential for the catalytic activity of the holoenzyme. Although the archaeal and eukaryotic holoenzymes have a much greater protein content than the bacterial ones, the RNA cores from all the three lineages are homologous. Helices corresponding to P1, P2, P3, P4, and P10/11 are common to all cellular RNase P RNAs. Yet, there is considerable sequence variation, particularly among the eukaryotic RNAs.","direct_ancestors":[{"relation_name":"is_a","term_name":"enzymatic_RNA","termid":"SO:0000372"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase_P_RNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:RNase_P_RNA","type":"exact"},{"name":"RNase P RNA","type":"exact"}],"termid":"SO:0000386"}


id: FYPO:0002621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of malate dehydrogenase (decarboxylating) (NAD+) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal malate dehydrogenase (decarboxylating) (NAD+) activity","synonyms":[{"name":"abnormal 'malic' enzyme activity","type":"related"},{"name":"abnormal (S)-malate:NAD+ oxidoreductase (oxaloacetate-decarboxylating) activity","type":"exact"},{"name":"abnormal NAD-linked malic enzyme activity","type":"related"},{"name":"abnormal NAD-malic enzyme activity","type":"broad"},{"name":"abnormal NAD-specific malic enzyme activity","type":"related"},{"name":"abnormal malate dehydrogenase (oxaloacetate-decarboxylating) activity","type":"exact"}],"termid":"FYPO:0002621"}


id: GO:0003292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endocardial cushion cell becomes a cell of a cardiac septum.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"cardiac septum development","termid":"GO:0003279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac septum cell differentiation","termid":"GO:0003292"}


id: PBO:0046803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor VIII associated 1","termid":"PBO:0046803"}


id: PBO:0060638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 1","termid":"PBO:0060638"}


id: PBO:0071379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 2","termid":"PBO:0071379"}


id: PBO:0068615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 66, pseudogene","termid":"PBO:0068615"}


id: MONDO:0000379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant form of Sertoli-leydig cell tumor.","definition_xrefs":["MONDO:patterns/malignant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sertoli-Leydig cell tumor","termid":"MONDO:0002479"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant Sertoli-Leydig cell tumor","secondary_identifiers":["DOID:0050618"],"synonyms":[{"name":"Sertoli-Leydig cell tumor, malignant","type":"exact"}],"termid":"MONDO:0000379","xrefs":{"Monarch":{"xref_id":"0000379"}}}


id: PBO:0062714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily K member 1 pseudogene","termid":"PBO:0062714"}


id: MONDO:0015512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of hypertension that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic hypertension (obsolete MONDO:0015512)","secondary_identifiers":["Orphanet:156629"],"synonyms":[{"name":"genetic hypertension","type":"exact"},{"name":"genetic hypertensive disorder","type":"exact"}],"termid":"MONDO:0015512","xrefs":{"Monarch":{"xref_id":"0015512"}}}


id: PATO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001140 immunoglobulin concentration value (obsolete PATO:0001140)","termid":"PATO:0001140"}


id: PBO:0083852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain an S1 RNA binding domain; human homolog EXOSC1 partially complements yeast csl4 null mutant, and can complement inviability of strain in which expression of CSL4 is repressed","termid":"PBO:0083852"}


id: PBO:0086734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; null mutant is sensitive to heat, pH disturbances, ionic stress, and various chemicals; hypersensitivity to hygromycin B indicative of defects in vacuolar trafficking","termid":"PBO:0086734"}


id: PATO:0000551
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000551 u v light sensitivity value (obsolete PATO:0000551)","termid":"PATO:0000551"}


id: PBO:0086667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; ORF emerged de novo in thymine-rich ancestral non-genic region, accumulated substantial changes under positive selection, and progressively increased its transmembrane propensity to give rise to a protein that integrates into the endoplasmic reticulum (ER) membrane while retaining potential for adaptive change","termid":"PBO:0086667"}


id: PBO:0049065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 82","termid":"PBO:0049065"}


id: PBO:0042220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 1","termid":"PBO:0042220"}


id: MONDO:0971014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 3","secondary_identifiers":["UMLS:C1859536","MEDGEN:347175","OMIM:620816"],"termid":"MONDO:0971014","xrefs":{"Monarch":{"xref_id":"0971014"}}}


id: MONDO:0005884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with flukes of the genus Opisthorchis.","definition_xrefs":["MESH:D009889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opisthorchiasis","secondary_identifiers":["icd11.foundation:1401769984","EFO:0007404","SCTID:1059007","UMLS:C0029106","ICD10CM:B66.0","DOID:13768","MEDGEN:10453","ICD9:121.0"],"synonyms":[{"name":"infection by Opisthorchis","type":"exact"},{"name":"infection due to Opisthorchis (felineus)(viverrini)","type":"related"},{"name":"infection due to cat liver fluke","type":"related"}],"termid":"MONDO:0005884","xrefs":{"Monarch":{"xref_id":"0005884"}}}


id: PR:Q9C1X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bop1 gene.","definition_xrefs":["UniProtKB:Q9C1X4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P32A8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.03c","synonyms":[{"name":"Spom972h-bop1","type":"exact"}],"termid":"PR:Q9C1X4"}


id: MONDO:0016428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple sclerosis variant (obsolete MONDO:0016428)","secondary_identifiers":["Orphanet:228145"],"termid":"MONDO:0016428","xrefs":{"Monarch":{"xref_id":"0016428"}}}


id: PBO:0085485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processing alpha glucosidase I; ER type II integral membrane N-glycoprotein involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation; also involved in ER protein quality control and sensing of ER stress","termid":"PBO:0085485"}


id: PBO:0026815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_binding_specificity","termid":"PBO:0026815"}


id: GO:0045458
data:
  {"annotated_genes":["SJAG_04816"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104743],"is_not":false,"summary":null,"term":"GO:0045458"}]},"cv_name":"biological_process","definition":"Genetic recombination within the DNA of the genes coding for ribosomal RNA.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"maintenance of rDNA","termid":"GO:0043007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04816":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"recombination within rDNA repeats","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"recombination within ribosomal DNA repeats","type":"exact"}],"termid":"GO:0045458","terms_by_termid":{"GO:0045458":null}}


id: PBO:0077462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM184C divergent transcript","termid":"PBO:0077462"}


id: GO:2000453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000450"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000452"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000453"}


id: PBO:0083724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 107kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion; involved in assembly of the exocyst complex; required with Sec3p for ER inheritance where it promotes anchoring of the cortical ER at the bud tip","termid":"PBO:0083724"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: GO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of protein hormones, neuropeptides and renin from their precursors, generally by cleavage of -Lys-Arg-Xaa at the Arg-Xaa bond.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase 1 activity (obsolete GO:0004285)","synonyms":[{"name":"NEC 1 activity","type":"narrow"},{"name":"PC1 activity","type":"narrow"},{"name":"neuroendocrine convertase 1 activity","type":"narrow"},{"name":"prohormone convertase 3","type":"related"},{"name":"prohormone convertase I activity","type":"narrow"},{"name":"proprotein convertase 1 activity","type":"exact"}],"termid":"GO:0004285"}


id: MONDO:0023230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ghose-Sachdev-Kumar syndrome","secondary_identifiers":["MEDGEN:425476","MESH:C537803","UMLS:C2974016"],"synonyms":[{"name":"bilateral nanophthalmos, pigmentary retinal dystrophy, and angle closure glaucoma","type":"related"}],"termid":"MONDO:0023230","xrefs":{"Monarch":{"xref_id":"0023230"}}}


id: MONDO:0013828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hyperekplexia in which the cause of the disease is a mutation in the GLRB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperekplexia","termid":"MONDO:0021022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperekplexia 2","secondary_identifiers":["DOID:0060697","MEDGEN:766205","UMLS:C3553291","GARD:15826","OMIM:614619"],"synonyms":[{"name":"GLRB hereditary hyperekplexia","type":"exact"},{"name":"HKPX2","type":"exact"},{"name":"hereditary hyperekplexia caused by mutation in GLRB","type":"exact"},{"name":"hyperekplexia 2","type":"exact"},{"name":"hyperekplexia type 2","type":"exact"}],"termid":"MONDO:0013828","xrefs":{"Monarch":{"xref_id":"0013828"}}}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: GO:0018911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,2,4-trichlorobenzene, a derivative of benzene with chlorine atoms attached to positions 1, 2 and 4 of the ring. It is a colorless liquid used as a solvent in chemical manufacturing, in dyes and intermediates, dielectric fluid, synthetic transformer oils, lubricants, heat-transfer medium and insecticides.","definition_xrefs":["PMID:1987135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1,2,4-trichlorobenzene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tbz"],"synonyms":[{"name":"1,2,4-trichlorobenzene metabolic process","type":"broad"},{"name":"1,2,4-trichlorobenzene metabolism","type":"broad"}],"termid":"GO:0018911"}


id: FYPO:0007571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cortical endoplasmic reticulum (ER) organization is abnormal. Cortical ER organization results in the assembly, arrangement of constituent parts, or disassembly of the part of the endoplasmic reticulum that consists of highly dynamic tubules that are juxtaposed to the plasma membrane.","definition_xrefs":["GO:0007029","GO:0032541","PMID:19571115","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cortical endoplasmic reticulum organization","synonyms":[{"name":"abnormal cortical ER organization","type":"exact"},{"name":"abnormal cortical endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal cortical endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal cortical endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007571"}


id: PBO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 3","termid":"PBO:0070377"}


id: PBO:0044806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 105A","termid":"PBO:0044806"}


id: MONDO:0014017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with autism and macrocephaly","secondary_identifiers":["Orphanet:642675","UMLS:C3554373","MEDGEN:767287","OMIM:615032"],"synonyms":[{"name":"AUTS18","type":"related"},{"name":"CHD8 overgrowth syndrome","type":"exact"},{"name":"autism, susceptibility to, 18","type":"exact"},{"name":"autism, susceptibility to, type 18","type":"exact"},{"name":"susceptibility to autism 18","type":"related"}],"termid":"MONDO:0014017","xrefs":{"Monarch":{"xref_id":"0014017"}}}


id: PBO:0079834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine monophosphate synthetase","termid":"PBO:0079834"}


id: PBO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe Centromere","termid":"PBO:0005279"}


id: PBO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G2_phase_during_starvation","termid":"PBO:0030652"}


id: PBO:0047878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(4)(q31.1)","termid":"PBO:0047878"}


id: MONDO:0014249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary polyadenomatosis is characterized by the presence in both breasts of multiple voluminous fibroadenomas with heterogeneous echo patterns.","definition_xrefs":["Orphanet:50920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple fibroadenoma of the breast","secondary_identifiers":["UMLS:C3809918","MEDGEN:816248","OMIM:615554"],"synonyms":[{"name":"MFAB","type":"related"},{"name":"mammary polyadenomatosis","type":"exact"},{"name":"multiple fibroadenomas of the breast","type":"related"}],"termid":"MONDO:0014249","xrefs":{"Monarch":{"xref_id":"0014249"}}}


id: MONDO:0005397
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007681"}]},"cv_name":"mondo","definition":"Enlargement of the thyroid gland usually caused by lack of iodine in the diet, hyperthyroidism, or thyroid nodules. Symptoms include difficulty in breathing and swallowing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"is_obsolete":false,"name":"goiter","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0018021","NCIT:C26785","DOID:12176","MEDGEN:42270","SCTID:3716002","EFO:0004283","MESH:D006042","ICD9:240.9","HP:0000853"],"synonyms":[{"name":"Thyromegaly","type":"exact"},{"name":"goiter","type":"exact"},{"name":"goiter (disease)","type":"exact"},{"name":"goitre (disease)","type":"exact"}],"termid":"MONDO:0005397","terms_by_termid":{"MONDO:0007681":null},"xrefs":{"Monarch":{"xref_id":"0005397"}}}


id: FYPO:0006517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions during G0 phase. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure during G0","synonyms":[{"name":"normal chromosome structure at telomere during G0","type":"exact"},{"name":"normal chromosome structure at telomeric region during G0","type":"exact"},{"name":"normal telomere structure during cell quiescence","type":"exact"},{"name":"normal telomere structure during quiescence","type":"exact"},{"name":"normal telomeric region structure during G0","type":"exact"}],"termid":"FYPO:0006517"}


id: GO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any endonucleolytic cleavage involved in the conversion of a primary ribosomal RNA (rRNA) transcript into a mature rRNA molecule. Some endonucleolytic cleavages produce the mature end, while others are a step in the process of generating the mature end from the pre-rRNA.","definition_xrefs":["GOC:krc","PMID:10690410"],"gene_count":0,"genotype_count":0,"name":"obsolete endonucleolytic cleavage involved in rRNA processing (obsolete GO:0000478)","synonyms":[{"name":"endonucleolytic cleavage during rRNA processing","type":"related"}],"termid":"GO:0000478"}


id: GO:0070027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of carbon monoxide (CO).","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140299"],"is_obsolete":false,"name":"carbon monoxide sensor activity","synonyms":[{"name":"carbon monoxide sensing activity","type":"exact"}],"termid":"GO:0070027"}


id: GO:0034530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxymethylsalicylaldehyde + NAD+ + H2O = 4-hydroxymethylsalicylate + NADH + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0767"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxymethylsalicyaldehyde dehydrogenase activity (obsolete GO:0034530)","termid":"GO:0034530"}


id: MONDO:0032618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 13","secondary_identifiers":["GARD:18371","UMLS:C4748770","OMIM:618235","DOID:0112076","MEDGEN:1648370"],"synonyms":[{"name":"MC1DN13","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 13","type":"related"}],"termid":"MONDO:0032618","xrefs":{"Monarch":{"xref_id":"0032618"}}}


id: PBO:0004413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1-Scd pathway protein Ral2","termid":"PBO:0004413"}


id: PBO:0087753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; mutation is functionally complemented by the bacterial GatB ortholog","termid":"PBO:0087753"}


id: PBO:0051705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase E","termid":"PBO:0051705"}


id: PATO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's coinciding spatially, partially or wholly with another entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlap with","synonyms":[{"name":"overlap","type":"exact"}],"termid":"PATO:0001590"}


id: GO:0071693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins in the extracellular region, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"},{"relation_name":"is_a","term_name":"establishment of protein localization to extracellular region","termid":"GO:0035592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein transport within extracellular region","termid":"GO:0071693"}


id: GO:1904097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of acid phosphatase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000088","GOC:bhm","PMID:8132635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acid phosphatase complex","termid":"GO:1904097"}


id: GO:0000912
data:
  {"annotated_genes":["SJAG_02831","SJAG_01143","SJAG_01805","SJAG_04887","SJAG_02864","SJAG_04930","SJAG_04703","SJAG_04621","SJAG_04498","SJAG_03596","SJAG_01943","SJAG_01894","SJAG_02592","SJAG_02431","SJAG_04077","SJAG_04982","SJAG_03048","SJAG_00082","SJAG_00228","SJAG_00700","SJAG_00268","SJAG_03703","SJAG_00938","SJAG_03045","SJAG_04597","SJAG_01732","SJAG_03025","SJAG_02700","SJAG_00279","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[108446,98613,89668,98355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[98248,112176,112611,118177,92932,102738,98052,92882,119816,75289,99225,95622,75940,76703,118761,88600,72899,102881,97977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[98602],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[102683],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[94748,90339],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[119900,94150],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"The assembly and arrangement of an apparatus composed of actin, myosin, and associated proteins that will function in cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"assembly of actomyosin apparatus involved in cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin apparatus assembly involved in cytokinesis","type":"exact"},{"name":"cytokinesis, formation of actomyosin apparatus","type":"exact"},{"name":"formation of actomyosin apparatus involved in cytokinesis","type":"related"}],"termid":"GO:0000912","terms_by_termid":{"GO:0000915":null,"GO:0071520":null,"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0068900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 142, pseudogene","termid":"PBO:0068900"}


id: PBO:0064592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member K, pseudogene","termid":"PBO:0064592"}


id: MONDO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germinoma that arises from the pineal gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant pineal area germ cell neoplasm","termid":"MONDO:0002073"},{"relation_name":"is_a","term_name":"brain germinoma","termid":"MONDO:0002214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal region germinoma","secondary_identifiers":["NCIT:C8712","MEDGEN:208928","DOID:7428","UMLS:C0854912","GARD:19162","Orphanet:91352"],"synonyms":[{"name":"germinoma","type":"broad"},{"name":"pineal germinoma","type":"exact"}],"termid":"MONDO:0004216","xrefs":{"Monarch":{"xref_id":"0004216"}}}


id: FYPO:0001948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of substance in cytosol","synonyms":[{"name":"increased cytosolic level of substance","type":"exact"},{"name":"increased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"increased level of substance in cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0001948"}


id: GO:0022818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a sodium ion across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium ion uniporter activity","termid":"GO:0022818"}


id: PBO:0080672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wolframin ER transmembrane glycoprotein","termid":"PBO:0080672"}


id: PATO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structure quality inhering in a bearer by virtue of the bearer's being filled with air.","definition_xrefs":["PATOC:CVS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflated","synonyms":[{"name":"air-filled","type":"exact"}],"termid":"PATO:0002376"}


id: PBO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 1","termid":"PBO:0043695"}


id: PBO:0079634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 5, Y-linked","termid":"PBO:0079634"}


id: MONDO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary central diabetes insipidus is a rare genetic subtype of central diabetes insipidus (CDI) characterized by polyuria and polydipsia due to a deficiency in vasopressin (AVP) synthesis.","definition_xrefs":["Orphanet:30925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"},{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"},{"relation_name":"is_a","term_name":"central diabetes insipidus","termid":"MONDO:0015790"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"neurohypophyseal diabetes insipidus","secondary_identifiers":["MEDGEN:574999","NANDO:2201050","GARD:16629","OMIM:125700","icd11.foundation:97299603","UMLS:C0342394","NCIT:C84933","SCTID:45369008","DOID:12388"],"synonyms":[{"name":"ADH deficiency","type":"exact"},{"name":"AVP deficiency","type":"exact"},{"name":"Arginine vasopressin deficiency","type":"exact"},{"name":"antidiuretic hormone deficiency","type":"exact"},{"name":"diabetes insipidus of pituitary gland","type":"exact"},{"name":"diabetes insipidus, cranial type","type":"related"},{"name":"diabetes insipidus, neurohypophyseal","type":"related"},{"name":"diabetes insipidus, primary central","type":"related"},{"name":"hereditary CDI","type":"exact"},{"name":"hereditary central diabetes insipidus","type":"related"},{"name":"hereditary neurogenic diabetes insipidus","type":"exact"},{"name":"neurogenic diabetes insipidus","type":"related"},{"name":"pituitary diabetes insipidus","type":"exact"},{"name":"pituitary gland diabetes insipidus","type":"exact"},{"name":"vasopressin defective diabetes insipidus","type":"exact"},{"name":"vasopressin deficiency","type":"exact"}],"termid":"MONDO:0007450","xrefs":{"Monarch":{"xref_id":"0007450"}}}


id: MONDO:0013301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aromatase deficiency disrupts the synthesis of estradiol, resulting in hirsutism of mothers during gestation of an affected child; pseudohermaphroditism and virilization in women; and tall stature, osteoporosis and obesity in men.","definition_xrefs":["Orphanet:91"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary 46,XX disorder of sex development (obsolete MONDO:0957024)","termid":"MONDO:0957024"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"aromatase deficiency","secondary_identifiers":["icd11.foundation:260189446","UMLS:C1960539","NCIT:C120144","GARD:365","MESH:C537436","MEDGEN:743307","OMIM:613546"],"synonyms":[{"name":"aromatase deficiency","type":"exact"},{"name":"congenital estrogen deficiency","type":"exact"},{"name":"congenital oestrogen deficiency","type":"exact"},{"name":"pseudohermaphroditism, female, due to placental aromatase deficiency","type":"related"}],"termid":"MONDO:0013301","xrefs":{"Monarch":{"xref_id":"0013301"}}}


id: PBO:0004697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S10 (predicted)","termid":"PBO:0004697"}


id: PBO:0025438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-56 Par2","termid":"PBO:0025438"}


id: GO:0017171
data:
  {"annotated_genes":["SJAG_01868","SJAG_00975","SJAG_02432","SJAG_04785","SJAG_03121","SJAG_04398","SJAG_03760","SJAG_03910","SJAG_02809","SJAG_04928","SJAG_01285","SJAG_05286","SJAG_02565","SJAG_01136","SJAG_00984","SJAG_03258","SJAG_00737","SJAG_03648","SJAG_04819","SJAG_03261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93375],"is_not":false,"summary":null,"term":"GO:0017171"},{"annotations":[75884,76589,79827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[76483,65630,65984,69583,75864,77759,68342,61917,74307,62025,79917,67474,74739,75174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[93528],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0004867"},{"annotations":[57574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[74384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["Wikipedia:Serine_hydrolase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03760":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"serine hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017171","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0004867":null,"GO:0008236":null,"GO:0008240":null,"GO:0017171":null}}


id: MONDO:0004562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ductal breast carcinoma in situ, characterized by the presence of neoplastic epithelial cells with apocrine differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma in situ","termid":"MONDO:0004658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast apocrine carcinoma in situ","secondary_identifiers":["UMLS:C1332315","NCIT:C5140","DOID:8428","MEDGEN:231073"],"synonyms":[{"name":"apocrine breast carcinoma in situ","type":"exact"},{"name":"apocrine carcinoma in situ of breast","type":"exact"},{"name":"apocrine carcinoma in situ of the breast","type":"exact"}],"termid":"MONDO:0004562","xrefs":{"Monarch":{"xref_id":"0004562"}}}


id: GO:0050944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of xanthophore differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthophore differentiation","termid":"GO:0050938"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"xanthophore differentiation","termid":"GO:0050936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of xanthophore differentiation","synonyms":[{"name":"down regulation of xanthophore differentiation","type":"exact"},{"name":"down-regulation of xanthophore differentiation","type":"exact"},{"name":"downregulation of xanthophore differentiation","type":"exact"},{"name":"inhibition of xanthophore differentiation","type":"narrow"}],"termid":"GO:0050944"}


id: GO:0009027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tartrate + NAD+ = oxaloglycolate + NADH + H+.","definition_xrefs":["EC:1.1.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tartrate dehydrogenase activity","secondary_identifiers":["RHEA:15209","MetaCyc:TARTRATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"mesotartrate dehydrogenase activity","type":"related"},{"name":"tartrate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0009027"}


id: PR:Q9UUC9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm34 gene.","definition_xrefs":["UniProtKB:Q9UUC9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.11c","synonyms":[{"name":"Spom972h-mdm34","type":"exact"}],"termid":"PR:Q9UUC9"}


id: PBO:0071881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 19","termid":"PBO:0071881"}


id: PBO:0051386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda constant 3 (Kern-Oz+ marker)","termid":"PBO:0051386"}


id: PBO:0041318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 4","termid":"PBO:0041318"}


id: PBO:0004544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein Thp1-Sac3 complex subunit (predicted)","termid":"PBO:0004544"}


id: PBO:0028024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle","termid":"PBO:0028024"}


id: GO:0097298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the nucleus.","definition_xrefs":["PMID:19366728","GOC:al","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus size","synonyms":[{"name":"regulation of nuclear size","type":"exact"},{"name":"regulation of nuclear volume","type":"exact"}],"termid":"GO:0097298"}


id: PBO:0067030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 43, pseudogene","termid":"PBO:0067030"}


id: PBO:0058801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7843","termid":"PBO:0058801"}


id: PBO:0047603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2B","termid":"PBO:0047603"}


id: MONDO:0019276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inherited epidermolysis bullosa (EB) encompasses a number of disorders characterized by recurrent blister formation as the result of structural fragility within the skin and selected other tissues.","definition_xrefs":["Orphanet:79361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa","termid":"MONDO:0006541"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"inherited epidermolysis bullosa","secondary_identifiers":["ICD9:757.39","UMLS:C1274224","GARD:18992","SCTID:402781004","MEDGEN:697573"],"synonyms":[{"name":"epidermolysis bullosa hereditaria","type":"exact"},{"name":"hereditary epidermolysis bullosa","type":"exact"}],"termid":"MONDO:0019276","xrefs":{"Monarch":{"xref_id":"0019276"}}}


id: MONDO:0014434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS5-related ciliopathy","termid":"MONDO:1040047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 5","secondary_identifiers":["DOID:0110127","GARD:10204","MEDGEN:856141","OMIM:615983","UMLS:C3892039"],"synonyms":[{"name":"BBS5","type":"exact"},{"name":"BBS5 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 5","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS5","type":"exact"},{"name":"Bardet-Biedl syndrome type 5","type":"exact"}],"termid":"MONDO:0014434","xrefs":{"Monarch":{"xref_id":"0014434"}}}


id: MONDO:1012566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal sequestra, non-human animal","termid":"MONDO:1012003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal sequestra, domestic cat","secondary_identifiers":["OMIA:002574-9685"],"termid":"MONDO:1012566","xrefs":{"Monarch":{"xref_id":"1012566"}}}


id: MONDO:0036025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxicity to dolutegravir","secondary_identifiers":["Orphanet:596744"],"termid":"MONDO:0036025","xrefs":{"Monarch":{"xref_id":"0036025"}}}


id: GO:0052869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 + reduced [NADPH--hemoprotein reductase] = 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. (5Z,8Z,11Z,14Z)-icosatetraenoic acid is also known as arachidonic acid is also and 20-hydroxy-(5Z,8Z,11Z,14Z)-eicosatetraenoate as 20-HETE.","definition_xrefs":["RHEA:39755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arachidonate omega-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R07041","MetaCyc:RXN-19677"],"synonyms":[{"name":"arachidonic acid hydroxylase activity","type":"broad"},{"name":"arachidonic acid omega-hydroxylase activity","type":"exact"},{"name":"arachidonic acid:oxygen 1-oxidoreductase activity","type":"exact"}],"termid":"GO:0052869"}


id: PBO:0077727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing 17","termid":"PBO:0077727"}


id: PBO:0079629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q1 antisense RNA 1","termid":"PBO:0079629"}


id: PBO:0064889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bgamma","termid":"PBO:0064889"}


id: GO:0007528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction.","definition_xrefs":["GOC:mtg_OBO2OWL_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular junction development","synonyms":[{"name":"NMJ stability","type":"related"},{"name":"neuromuscular junction organization","type":"exact"},{"name":"neuromuscular junction stability","type":"related"}],"termid":"GO:0007528"}


id: GO:0008803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: P(1),P(4)-bis(5'-adenosyl) tetraphosphate + H2O = 2 ADP + 2 H+.","definition_xrefs":["RHEA:24252","EC:3.6.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bis(5'-nucleosyl)-tetraphosphatase activity","termid":"GO:0008796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity","secondary_identifiers":["KEGG_REACTION:R00125","MetaCyc:3.6.1.41-RXN"],"synonyms":[{"name":"1-P,4-P-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"Ap(4)A hydrolase activity","type":"broad"},{"name":"Ap4A hydrolase activity","type":"broad"},{"name":"P1,P4-bis(5'-nucleosyl)-tetraphosphate nucleosidebisphosphohydrolase activity","type":"related"},{"name":"adenosine tetraphosphate phosphodiesterase activity","type":"related"},{"name":"bis(5'-adenosyl) tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphatase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase activity","type":"related"},{"name":"diadenosine polyphosphate hydrolase activity","type":"related"},{"name":"diadenosine tetraphosphatase (symmetrical)","type":"narrow"},{"name":"diadenosine tetraphosphate hydrolase activity","type":"related"},{"name":"diadenosinetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphatase (symmetrical) activity","type":"related"},{"name":"dinucleosidetetraphosphate (symmetrical)","type":"related"},{"name":"symmetrical diadenosine tetraphosphate hydrolase activity","type":"related"}],"termid":"GO:0008803"}


id: MONDO:0008137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oral-facial-digital syndrome, type 10 is characterized by facial (telecanthus, flat nasal bridge, retrognathia), oral (cleft palate, vestibular frenula) and digital (oligodactyly, preaxial polydactyly) features, associated with remarkable radial shortening, fibular agenesis and coalescence of tarsal bones. The syndrome has been described in one 10-month-old girl. No new cases have been described since 1993.","definition_xrefs":["Orphanet:2756"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome X","secondary_identifiers":["MESH:C563491","GARD:4061","OMIM:165590","SCTID:722075004","DOID:0060380","UMLS:C1833796","MEDGEN:322280"],"synonyms":[{"name":"Figuera syndrome","type":"exact"},{"name":"OFD syndrome 10","type":"related"},{"name":"OFD10","type":"exact"},{"name":"Ofds 10","type":"related"},{"name":"oral facial digital syndrome 10","type":"related"},{"name":"oral facial digital syndrome type 10","type":"related"},{"name":"oral-Facial-digital syndrome with fibular aplasia","type":"related"},{"name":"oral-Facial-digital syndrome, type 10","type":"related"},{"name":"oral-facial-digital syndrome 10","type":"related"},{"name":"oral-facial-digital syndrome type 10","type":"exact"},{"name":"orofaciodigital syndrome 10","type":"related"},{"name":"orofaciodigital syndrome X","type":"exact"},{"name":"orofaciodigital syndrome type 10","type":"exact"},{"name":"orofaciodigital syndrome type Figuera","type":"related"},{"name":"orofaciodigital syndrome type X","type":"exact"},{"name":"orofaciodigital syndrome with fibular aplasia","type":"exact"}],"termid":"MONDO:0008137","xrefs":{"Monarch":{"xref_id":"0008137"}}}


id: GO:1902170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reactive nitrogen species stimulus.","definition_xrefs":["PMID:22504638","GOC:sl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to reactive nitrogen species","secondary_identifiers":["GO:1990106"],"termid":"GO:1902170"}


id: PBO:0073260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 4","termid":"PBO:0073260"}


id: MONDO:0002642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a trochlear nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"trochlear nerve disorder","termid":"MONDO:0007002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trochlear nerve neoplasm","secondary_identifiers":["SCTID:126970001","UMLS:C1263896","ICD9:239.7","DOID:3421","MEDGEN:226811","NCIT:C5825"],"synonyms":[{"name":"IVth cranial nerve neoplasms","type":"exact"},{"name":"IVth cranial nerve tumors","type":"exact"},{"name":"IVth cranial nerve tumours","type":"exact"},{"name":"fourth cranial nerve neoplasm","type":"exact"},{"name":"fourth cranial nerve neoplasms","type":"exact"},{"name":"fourth cranial nerve tumor","type":"exact"},{"name":"fourth cranial nerve tumors","type":"exact"},{"name":"fourth cranial nerve tumour","type":"exact"},{"name":"fourth cranial nerve tumours","type":"exact"},{"name":"neoplasm of fourth cranial nerve","type":"exact"},{"name":"neoplasm of the fourth cranial nerve","type":"exact"},{"name":"neoplasm of the trochlear nerve","type":"exact"},{"name":"neoplasm of trochlear nerve","type":"exact"},{"name":"trochlear nerve neoplasm (disease)","type":"exact"},{"name":"trochlear nerve neoplasms","type":"exact"},{"name":"trochlear nerve tumor","type":"exact"},{"name":"trochlear nerve tumors","type":"exact"},{"name":"trochlear nerve tumour","type":"exact"},{"name":"trochlear nerve tumours","type":"exact"},{"name":"tumor of fourth cranial nerve","type":"exact"},{"name":"tumor of the fourth cranial nerve","type":"exact"},{"name":"tumor of the trochlear nerve","type":"exact"},{"name":"tumor of trochlear nerve","type":"exact"},{"name":"tumour of fourth cranial nerve","type":"exact"},{"name":"tumour of the fourth cranial nerve","type":"exact"},{"name":"tumour of the trochlear nerve","type":"exact"},{"name":"tumour of trochlear nerve","type":"exact"}],"termid":"MONDO:0002642","xrefs":{"Monarch":{"xref_id":"0002642"}}}


id: MOD:01297
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 5x(13)C labeled L-proline.","definition_xrefs":["PubMed:12716131","Unimod:772#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C labeled L-proline","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01297"}


id: PBO:0041015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 2","termid":"PBO:0041015"}


id: GO:0097498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endothelial tube morphogenesis process by which the tube is increased in length.","definition_xrefs":["PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube morphogenesis","termid":"GO:0061154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube lumen extension","termid":"GO:0097498"}


id: MONDO:0016970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial trisomy of chromosome 20","termid":"MONDO:0016938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 20","secondary_identifiers":["icd11.foundation:1196484734","MEDGEN:1826031","UMLS:C5679695","Orphanet:262995","GARD:20890"],"synonyms":[{"name":"partial duplication of chromosome 20q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 20","type":"exact"},{"name":"partial trisomy of chromosome 20q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 20","type":"exact"}],"termid":"MONDO:0016970","xrefs":{"Monarch":{"xref_id":"0016970"}}}


id: FYPO:0005888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased, and some of the protein is present in the nucleoplasm instead.","definition_xrefs":["PomBase:mah","PMID:27666591"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleoplasm","termid":"FYPO:0002843"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","synonyms":[{"name":"decreased protein localisation to centromeric chromatin, with protein mislocalised to nucleoplasm","type":"exact"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm, during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at centromere, with protein mislocalized to nucleoplasm","type":"exact"},{"name":"reduced protein localization to centromeric chromatin, with protein mislocalized to nucleoplasm","type":"exact"}],"termid":"FYPO:0005888"}


id: SO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding RNA transcribed from the opposite DNA strand compared with other transcripts and overlap in part with sense RNA.","definition_xrefs":["PMID:19638999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"},{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_lncRNA","synonyms":[{"name":"antisense lncRNA","type":"related"},{"name":"natural antisense transcript","type":"exact"}],"termid":"SO:0001904"}


id: MONDO:0012657
data:
  {"annotated_genes":["SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85843],"is_not":false,"summary":null,"term":"MONDO:0012657"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01067":null},"genotype_count":0,"is_obsolete":false,"name":"Mungan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:611376","MESH:C548078","UMLS:C1969653","MEDGEN:369554"],"synonyms":[{"name":"MGS","type":"exact"},{"name":"MUNGAN syndrome","type":"exact"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett oesophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett esophagus and Cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett oesophagus and Cardiac abnormalities","type":"related"},{"name":"visceral Neuromyopathy, familial, with pseudoobstruction, Megaduodenum, Barrett esophagus, and Cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett oesophagus and cardiac abnormalities","type":"related"}],"termid":"MONDO:0012657","terms_by_termid":{"MONDO:0012657":null},"xrefs":{"Monarch":{"xref_id":"0012657"}}}


id: PBO:0003551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein But2","termid":"PBO:0003551"}


id: MONDO:0010885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiokeratoma corporis diffusum with arteriovenous fistulas","secondary_identifiers":["OMIM:600419","UMLS:C1838141","MESH:C563940","MEDGEN:324953"],"synonyms":[{"name":"angiokeratoma corporis diffusum with arteriovenous fistulas","type":"exact"}],"termid":"MONDO:0010885","xrefs":{"Monarch":{"xref_id":"0010885"}}}


id: GO:0098940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from presynapse to postynapse, across the synaptic cleft, mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling by nitric oxide","termid":"GO:0098940"}


id: PBO:0067488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 622, pseudogene","termid":"PBO:0067488"}


id: PBO:0003153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase subunit Stt3","termid":"PBO:0003153"}


id: PBO:0038433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetoacetyl-CoA synthetase pseudogene 1","termid":"PBO:0038433"}


id: PBO:0043315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 5","termid":"PBO:0043315"}


id: PBO:0086309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with positive role in the multivesicular body sorting pathway; functions and forms a complex with Did2p; recruitment to endosomes is mediated by the Vps2p-Vps24p subcomplex of ESCRT-III; also interacts with Vps4p","termid":"PBO:0086309"}


id: PBO:0053424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 366","termid":"PBO:0053424"}


id: GO:0044024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2A-serine (position 1) + ATP = histone H2A-phosphoserine (position 1) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 1 of histone H2A.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2A kinase activity","termid":"GO:0140995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0140096","GO:0016740","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"histone H2AS1 kinase activity","synonyms":[{"name":"histone kinase activity (H2A-S1 specific)","type":"exact"},{"name":"histone serine kinase activity (H2A-S1 specific)","type":"exact"},{"name":"histone-serine kinase activity (H2A-S1 specific)","type":"exact"}],"termid":"GO:0044024"}


id: RO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"RO:0002436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylates","termid":"RO:0002447"}


id: MONDO:0006743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the endocrine glands with species of mycobacterium, most often mycobacterium tuberculosis.","definition_xrefs":["MESH:D014383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocrine tuberculosis","secondary_identifiers":["UMLS:C0041310","MEDGEN:52884"],"termid":"MONDO:0006743","xrefs":{"Monarch":{"xref_id":"0006743"}}}


id: PBO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn4","termid":"PBO:0001274"}


id: GO:0045708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination in a larval organism.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of salivary gland boundary specification","termid":"GO:0045704"},{"relation_name":"regulates","term_name":"larval salivary gland boundary specification","termid":"GO:0007433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of larval salivary gland boundary specification","synonyms":[{"name":"regulation of larval salivary gland determination","type":"exact"}],"termid":"GO:0045708"}


id: GO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which transitional stage B cells acquire the specialized features of mature B cells in the spleen.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell differentiation","synonyms":[{"name":"mature B lymphocyte differentiation","type":"exact"},{"name":"mature B-cell differentiation","type":"exact"},{"name":"mature B-lymphocyte differentiation","type":"exact"},{"name":"mature cell development","type":"related"}],"termid":"GO:0002335"}


id: GO:0103074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD + D-glucopyranose 6-phosphate = NADH + H+ + 3-dehydro-D-glucose 6-phosphate.","definition_xrefs":["GOC:pz","RHEA:37547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucose-6-phosphate 3-dehydrogenase activity","secondary_identifiers":["EC:1.1.1.361","MetaCyc:RXN8J2-136"],"termid":"GO:0103074"}


id: MONDO:0009599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysostosis-intellectual disability-conductive deafness syndrome is characterized by metaphyseal dysplasia, short-limb dwarfism, mild intellectual deficit and conductive hearing loss, associated with repeated episodes of otitis media in childhood. It has been described in three brothers born to consanguineous Sicilian parents. Variable manifestations included hyperopia and strabismus. The mode of inheritance is autosomal recessive.","definition_xrefs":["Orphanet:2502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysostosis-intellectual disability-conductive deafness syndrome","secondary_identifiers":["MESH:C565396","MEDGEN:344437","OMIM:250420","GARD:3566","UMLS:C1855175"],"synonyms":[{"name":"metaphyseal dysostosis intellectual disability conductive deafness","type":"related"},{"name":"metaphyseal dysostosis mental retardation conductive deafness","type":"related"},{"name":"metaphyseal dysostosis, conductive hearing loss and intellectual disability","type":"related"},{"name":"metaphyseal dysostosis, conductive hearing loss and mental retardation","type":"related"},{"name":"metaphyseal dysostosis, intellectual disability, and conductive deafness","type":"related"},{"name":"metaphyseal dysostosis, mental retardation, and conductive deafness","type":"related"}],"termid":"MONDO:0009599","xrefs":{"Monarch":{"xref_id":"0009599"}}}


id: PBO:0058759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6883","termid":"PBO:0058759"}


id: MONDO:0010552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth peroneal muscular atrophy, X-linked, with aplasia cutis congenita","secondary_identifiers":["MEDGEN:337105","MESH:C538077","OMIM:302803","UMLS:C1844864"],"synonyms":[{"name":"Charcot-Marie-Tooth peroneal muscular atrophy, X-linked, with aplasia cutis congenita","type":"exact"}],"termid":"MONDO:0010552","xrefs":{"Monarch":{"xref_id":"0010552"}}}


id: PBO:0027751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus","termid":"PBO:0027751"}


id: GO:0042700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by luteinizing hormone binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"luteinizing hormone signaling pathway","synonyms":[{"name":"luteinizing hormone signalling pathway","type":"exact"}],"termid":"GO:0042700"}


id: PBO:0038828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 1","termid":"PBO:0038828"}


id: MOD:00239
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-methyl-L-cysteine.","definition_xrefs":["PubMed:1339288","PubMed:11875433","RESID:AA0234","PubMed:10660523","Unimod:34#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methylated residue","termid":"MOD:00654"},{"relation_name":"is_a","term_name":"monomethylated L-cysteine","termid":"MOD:01682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427","MOD:00905"],"is_obsolete":false,"name":"S-methyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(methylsulfanyl)propanoic acid","type":"exact"},{"name":"ACT_SITE S-methylcysteine intermediate","type":"exact"},{"name":"L-3-(methylthio)alanine","type":"exact"},{"name":"MOD_RES S-methylcysteine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"S-methyl-L-cysteine","type":"exact"},{"name":"S-methylated L-cysteine","type":"exact"},{"name":"SMeCys","type":"exact"}],"termid":"MOD:00239"}


id: FYPO:0003900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal triphosphatase activity","termid":"FYPO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased triphosphatase activity","synonyms":[{"name":"reduced triphosphatase activity","type":"exact"}],"termid":"FYPO:0003900"}


id: GO:0070033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7553862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex","synonyms":[{"name":"SNARE complex (Vamp2, Snap25, Stx1a, Cplx2)","type":"narrow"},{"name":"Vamp2-Snap25-Stx1a-Cplx2 complex","type":"narrow"}],"termid":"GO:0070033"}


id: MONDO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of spastic cerebral palsy characterized by increased muscle tone of the arm and leg on the same side of the body.","definition_xrefs":["NCIT:C116905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic hemiplegia","secondary_identifiers":["ICD9:342.10","DOID:10967","MEDGEN:56345","SCTID:79633009","icd11.foundation:1030700023","UMLS:C0154694","ICD9:343.1"],"synonyms":[{"name":"congenital hemiplegia","type":"related"},{"name":"hemiplegic cerebral palsy","type":"exact"},{"name":"hemiplegic infantile cerebral palsy","type":"exact"},{"name":"spastic hemiplegic cerebral palsy","type":"exact"}],"termid":"MONDO:0001168","xrefs":{"Monarch":{"xref_id":"0001168"}}}


id: PBO:0039493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A16, pseudogene","termid":"PBO:0039493"}


id: PBO:0051204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-4","termid":"PBO:0051204"}


id: PBO:0002879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein","termid":"PBO:0002879"}


id: GO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of MAPK phosphatase into, out of or within a cell, or between cells.","definition_xrefs":["GOC:ebc","GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK phosphatase transporter activity (obsolete GO:0045206)","synonyms":[{"name":"MAPK phosphatase transporter activity","type":"exact"},{"name":"MKP shuttle","type":"narrow"},{"name":"leptomycin B-sensitive MAPK phosphatase transporter activity","type":"narrow"},{"name":"leptomycin B-sensitive MKP shuttle","type":"narrow"}],"termid":"GO:0045206"}


id: PBO:0083374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF CTR","termid":"PBO:0083374"}


id: SO:0000793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000793 engineered_DNA (obsolete SO:0000793)","termid":"SO:0000793"}


id: PBO:0050925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3 pseudogene 8","termid":"PBO:0050925"}


id: PBO:0085701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in RNA polymerase II transcription; also required for histone modifications and splicing; constitutively recruited to the CYC1 promoter and required for recruitment of chromatin remodeling factors for the expression of CYC1 gene; interacts genetically or physically with RNAP II, TBP, TFIIS, and chromatin remodelling factors; central domain is highly conserved throughout eukaryotes; mutations confer an Spt- phenotype","termid":"PBO:0085701"}


id: GO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAS small monomeric GTPase activity (obsolete GO:0003930)","synonyms":[{"name":"RAS small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003930"}


id: MONDO:0012028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 3","secondary_identifiers":["MEDGEN:333993","OMIM:608392","UMLS:C1842112"],"synonyms":[{"name":"AIS3","type":"exact"},{"name":"autoimmune disease susceptibility locus, chromosome 8-related","type":"related"},{"name":"autoimmune disease, susceptibility to, 3","type":"exact"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility 4","type":"related"}],"termid":"MONDO:0012028","xrefs":{"Monarch":{"xref_id":"0012028"}}}


id: PBO:0113756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing factor, FRG1 family, Frg1","termid":"PBO:0113756"}


id: GO:0019653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"anaerobic purine nucleobase catabolic process","synonyms":[{"name":"anaerobic purine base catabolic process","type":"exact"},{"name":"anaerobic purine base catabolism","type":"exact"},{"name":"anaerobic purine catabolic process","type":"related"},{"name":"purine base fermentation","type":"exact"},{"name":"purine fermentation","type":"related"}],"termid":"GO:0019653"}


id: MONDO:0000679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to perceive facial expression, body language and intonation, rendering them unable to non-verbally perceive people's emotions and limiting that aspect of social interaction.","definition_xrefs":["DOID:0060149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"social emotional agnosia","synonyms":[{"name":"expressive agnosia","type":"exact"}],"termid":"MONDO:0000679","xrefs":{"Monarch":{"xref_id":"0000679"}}}


id: PBO:0064925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit","termid":"PBO:0064925"}


id: PBO:0067519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 660, pseudogene","termid":"PBO:0067519"}


id: PBO:0064686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 22","termid":"PBO:0064686"}


id: PBO:0038734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 7A","termid":"PBO:0038734"}


id: GO:0140861
data:
  {"annotated_genes":["SJAG_03628","SJAG_02698","SJAG_04989","SJAG_01385","SJAG_04793","SJAG_00783","SJAG_03230","SJAG_03792","SJAG_04039","SJAG_00349","SJAG_05282","SJAG_02701","SJAG_02990","SJAG_01611","SJAG_04613","SJAG_04190","SJAG_00187","SJAG_02303","SJAG_00045","SJAG_02439","SJAG_03145","SJAG_04097","SJAG_03579","SJAG_04272","SJAG_02500","SJAG_02198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74175,89214,90390,91033,92713,93135,94643,94943,95161,95404,97552,99229,99288,99464,99716,100000,104353,104537,105039,107194,108041,109377,113452,115019,115898,118862],"is_not":false,"summary":null,"term":"GO:0140861"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that allows DNA repair enzyme to access genomic DNA and repair DNA lesions.","definition_xrefs":["PMID:15528408","PMID:28053344","PMID:29095668","PMID:35689883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01385":null,"SJAG_01611":null,"SJAG_02198":null,"SJAG_02303":null,"SJAG_02439":null,"SJAG_02500":null,"SJAG_02698":null,"SJAG_02701":null,"SJAG_02990":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04039":null,"SJAG_04097":null,"SJAG_04190":null,"SJAG_04272":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_04989":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"DNA repair-dependent chromatin remodeling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage-dependent chromatin remodelling","type":"exact"}],"termid":"GO:0140861","terms_by_termid":{"GO:0140861":null}}


id: MONDO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the sebaceous glands. Representative examples include sebaceous adenoma and sebaceous carcinoma.","definition_xrefs":["NCIT:C3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland neoplasm","secondary_identifiers":["UMLS:C0036503","SCTID:126491004","MEDGEN:19911","ICD9:239.2","DOID:5759","EFO:1001172","MESH:D012626"],"synonyms":[{"name":"neoplasm of sebaceous gland","type":"exact"},{"name":"sebaceous gland neoplasm","type":"exact"},{"name":"sebaceous gland neoplasm (disease)","type":"exact"},{"name":"sebaceous gland tumor","type":"exact"},{"name":"sebaceous gland tumour","type":"exact"},{"name":"sebaceous neoplasm","type":"exact"},{"name":"sebaceous tumor","type":"exact"},{"name":"sebaceous tumour","type":"exact"},{"name":"tumor of sebaceous gland","type":"exact"},{"name":"tumour of sebaceous gland","type":"exact"}],"termid":"MONDO:0006963","xrefs":{"Monarch":{"xref_id":"0006963"}}}


id: PBO:0027323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_mtDNA_level","termid":"PBO:0027323"}


id: MONDO:0003173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the brain stem.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain stem glioma","termid":"MONDO:0002911"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brain stem astrocytic neoplasm","secondary_identifiers":["NCIT:C7445","SCTID:107581000119103","MEDGEN:231458","UMLS:C1332608","DOID:4860"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of brainstem","type":"exact"},{"name":"brain stem astrocytoma","type":"exact"},{"name":"brainstem astrocytoma","type":"exact"},{"name":"brainstem astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003173","xrefs":{"Monarch":{"xref_id":"0003173"}}}


id: GO:2000526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of glycoprotein biosynthetic process that is involved in immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"part_of","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation","synonyms":[{"name":"positive regulation of glycoprotein biosynthetic process of formation of immunological synapse","type":"exact"},{"name":"positive regulation of glycoprotein biosynthetic process of immunological synapse formation","type":"exact"}],"termid":"GO:2000526"}


id: GO:1900774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumiquinazoline.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline catabolic process (obsolete GO:1900774)","synonyms":[{"name":"fumiquinazoline breakdown","type":"exact"},{"name":"fumiquinazoline catabolism","type":"exact"},{"name":"fumiquinazoline degradation","type":"exact"},{"name":"fumiquinazolines breakdown","type":"related"},{"name":"fumiquinazolines catabolic process","type":"related"},{"name":"fumiquinazolines catabolism","type":"related"},{"name":"fumiquinazolines degradation","type":"related"}],"termid":"GO:1900774"}


id: MOD:00137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into L-3-phenyllactic acid.","definition_xrefs":["PubMed:1973541","Unimod:7#F","RESID:AA0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-phenyllactic acid","synonyms":[{"name":"(2S)-2-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-3-phenyllactic acid","type":"exact"},{"name":"MOD_RES 3-phenyllactic acid","type":"exact"}],"termid":"MOD:00137"}


id: PBO:0040818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA like chromatin remodeling complex associated protein","termid":"PBO:0040818"}


id: PBO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S10 (predicted)","termid":"PBO:0001845"}


id: PBO:0111917
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0111917"}


id: GO:1905389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.","definition_xrefs":["GOC:TermGenie","PMID:14656734","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to leukotriene B4","synonyms":[{"name":"response to LTB4","type":"exact"}],"termid":"GO:1905389"}


id: FYPO:0007554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tolnaftate. Cells stop growing (and may die) at a concentration of tolnaftate that allows wild type cells to grow.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to tolnaftate","synonyms":[{"name":"hypersensitive to tolnaftate","type":"exact"},{"name":"sensitive to TFT","type":"exact"},{"name":"sensitive to tolnaftate during mitotic cell cycle","type":"related"},{"name":"sensitive to tolnaftate during vegetative growth","type":"exact"}],"termid":"FYPO:0007554"}


id: PBO:0073420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like","termid":"PBO:0073420"}


id: MONDO:0015169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by chronic diarrhea in infancy or childhood in association with intestinal glucoamylase deficiency.","definition_xrefs":["Orphanet:103907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"},{"relation_name":"is_a","term_name":"chronic diarrheal disease","termid":"MONDO:0044751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"chronic diarrhea due to glucoamylase deficiency","secondary_identifiers":["GARD:19838","SCTID:716277000","MEDGEN:898614","UMLS:C4275068","icd11.foundation:2084206046","NANDO:2200911"],"synonyms":[{"name":"chronic diarrhea due to glucoamylase deficiency","type":"exact"},{"name":"maltase glucoamylase deficiency","type":"related"},{"name":"maltase-glucoamylase deficiency","type":"exact"}],"termid":"MONDO:0015169","xrefs":{"Monarch":{"xref_id":"0015169"}}}


id: GO:0045487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin metabolic process","termid":"GO:0009685"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gibberellin catabolic process","synonyms":[{"name":"gibberellic acid breakdown","type":"narrow"},{"name":"gibberellic acid catabolic process","type":"narrow"},{"name":"gibberellic acid catabolism","type":"narrow"},{"name":"gibberellic acid degradation","type":"narrow"},{"name":"gibberellin catabolism","type":"exact"}],"termid":"GO:0045487"}


id: PBO:0078381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 5, pseudogene","termid":"PBO:0078381"}


id: PBO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex component Spt16","termid":"PBO:0004611"}


id: PBO:0058091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4307 host gene","termid":"PBO:0058091"}


id: GO:0019871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel inhibitor activity","termid":"GO:0008200"},{"relation_name":"is_a","term_name":"sodium channel regulator activity","termid":"GO:0017080"},{"relation_name":"negatively_regulates","term_name":"sodium channel activity","termid":"GO:0005272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0022857"},{"rel_name":"regulates","termid":"GO:0005215"},{"rel_name":"regulates","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"negatively_regulates","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0140678","GO:0098772","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium channel inhibitor activity","secondary_identifiers":["GO:0019868"],"termid":"GO:0019871"}


id: PBO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nomencature conflict, prs1 is the primary name for SPBC19C7.06 using unified nomenclature for tRNA ligases","termid":"PBO:0001621"}


id: PBO:0049295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTCD antisense RNA 1","termid":"PBO:0049295"}


id: MONDO:0016094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal germ cell malignant tumor","secondary_identifiers":["Orphanet:206489","GARD:20347","UMLS:C4749402","MEDGEN:1670250"],"synonyms":[{"name":"malignant germ cell tumor of the vagina","type":"related"},{"name":"malignant germ cell tumour of the vagina","type":"related"},{"name":"vagina malignant germ cell tumor","type":"exact"},{"name":"vagina malignant germ cell tumour","type":"exact"},{"name":"vaginal germ cell cancer","type":"exact"}],"termid":"MONDO:0016094","xrefs":{"Monarch":{"xref_id":"0016094"}}}


id: PBO:0080314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 78 pseudogene","termid":"PBO:0080314"}


id: GO:1903360
data:
  {"annotated_genes":["SJAG_00596","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100414,104849],"is_not":false,"summary":null,"term":"GO:1903360"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lateral cortical node.","definition_xrefs":["GOC:TermGenie","PMID:25009287","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in lateral cortical node","type":"exact"},{"name":"protein localisation to lateral cortical node","type":"exact"},{"name":"protein localization in lateral cortical node","type":"exact"}],"termid":"GO:1903360","terms_by_termid":{"GO:1903360":null}}


id: PBO:0085159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; required for protein translocation into the endoplasmic reticulum (ER); homolog of Yarrowia lipolytica SLS1; GrpE-like protein","termid":"PBO:0085159"}


id: MONDO:0004715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a liver.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"liver carcinoma in situ","secondary_identifiers":["SCTID:92644006","ICD10CM:D01.5","DOID:9132","UMLS:C0345908","ICD9:230.8","MEDGEN:577201"],"synonyms":[{"name":"carcinoma in situ of liver","type":"exact"},{"name":"carcinoma in situ of liver and biliary system","type":"exact"},{"name":"carcinoma in situ of liver, gallbladder and bile ducts","type":"exact"},{"name":"liver in situ carcinoma","type":"exact"},{"name":"stage 0 liver carcinoma","type":"exact"}],"termid":"MONDO:0004715","xrefs":{"Monarch":{"xref_id":"0004715"}}}


id: PBO:0011085
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, thiamine Km 6 uM","termid":"PBO:0011085"}


id: PBO:0110265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein (PABP) Pab2","termid":"PBO:0110265"}


id: PBO:0048256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-3-O-sulfotransferase 4","termid":"PBO:0048256"}


id: MONDO:0001159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the presence of two or more identities with distinct patterns of perception and personality which recurrently take control of the person's behavior; this is accompanied by a retrospective gap in memory of important personal information that far exceeds ordinary forgetfulness. The changes in identity are not due to substance use or to a general medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple personality disorder","secondary_identifiers":["SCTID:31611000","UMLS:C0026773","MESH:D009105","DOID:10934","ICD9:300.14","MEDGEN:44520","NCIT:C94330","ICD10CM:F44.81"],"synonyms":[{"name":"dissociative identity disorder","type":"exact"}],"termid":"MONDO:0001159","xrefs":{"Monarch":{"xref_id":"0001159"}}}


id: GO:0104004
data:
  {"annotated_genes":["SJAG_02199","SJAG_00814","SJAG_04877","SJAG_04726","SJAG_00208","SJAG_04190","SJAG_00409","SJAG_05242","SJAG_03898","SJAG_02342","SJAG_02818","SJAG_00272","SJAG_02200","SJAG_01648","SJAG_04668","SJAG_01084","SJAG_02182","SJAG_00863","SJAG_03893","SJAG_05197","SJAG_03185","SJAG_00596","SJAG_00661","SJAG_00729","SJAG_02828","SJAG_01262","SJAG_02334","SJAG_04205","SJAG_04150","SJAG_02860","SJAG_02091","SJAG_01010","SJAG_02883","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[92742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"},{"annotations":[119869,119870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[89852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071473"},{"annotations":[116583,96303,103108,94702,114768,110653,104845,92227,117375,106818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071470"},{"annotations":[100496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071472"},{"annotations":[95571,103142,109420,77250],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[66647,76010,97453,88353,69185,96350,113135,94006,60311,104545,70439,66005,65061,106267,67864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an environmental stimulus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00409":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01084":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02091":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_02883":null,"SJAG_03185":null,"SJAG_03893":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04205":null,"SJAG_04668":null,"SJAG_04726":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to environmental stimulus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:23873862":null},"termid":"GO:0104004","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071470":null,"GO:0071472":null,"GO:0071473":null,"GO:0071474":null,"GO:0071483":null,"GO:1904161":null}}


id: PBO:0091996
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter located -692--679","termid":"PBO:0091996"}


id: GO:0035949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of gluconeogenesis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17875938"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of gluconeogenesis by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035949)","synonyms":[{"name":"positive regulation of gluconeogenesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of gluconeogenesis by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of gluconeogenesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of glucose biosynthetic process by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of glucose biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035949"}


id: MONDO:0008432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ketone compounds, ability to smell (obsolete MONDO:0008432)","secondary_identifiers":["OMIM:182270"],"synonyms":[{"name":"ketone compounds, ability to smell","type":"exact"}],"termid":"MONDO:0008432","xrefs":{"Monarch":{"xref_id":"0008432"}}}


id: PBO:0003862
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy","termid":"PBO:0003862"}


id: PBO:0074045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 27","termid":"PBO:0074045"}


id: GO:0009232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["PMID:10961912","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin catabolic process","termid":"GO:0042365"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"riboflavin catabolic process","synonyms":[{"name":"riboflavin breakdown","type":"exact"},{"name":"riboflavin catabolism","type":"exact"},{"name":"riboflavin degradation","type":"exact"},{"name":"vitamin B2 catabolic process","type":"exact"},{"name":"vitamin B2 catabolism","type":"exact"},{"name":"vitamin G catabolic process","type":"exact"},{"name":"vitamin G catabolism","type":"exact"}],"termid":"GO:0009232"}


id: PBO:0067463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 589, pseudogene","termid":"PBO:0067463"}


id: SO:0000621
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III to transcribe predominantly noncoding RNAs. This promoter contains a proximal sequence element (PSE) and a TATA box upstream of the gene that it regulates. Transcription can also be activated by a distal sequence element (DSE), which is located further upstream. ","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_3","synonyms":[{"name":"RNApol III promoter type 3","type":"exact"}],"termid":"SO:0000621"}


id: PBO:0059084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON1 homolog B, secretory trafficking associated","termid":"PBO:0059084"}


id: PBO:0075100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 149","termid":"PBO:0075100"}


id: GO:0097407
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small granular inclusions (about 1-3 microns in diameter) found in the anterior horn cells, and appearing either singly or in a group. Sometimes they are arranged in small beaded chains. Bunina bodies express cystatin C and consist of electron-dense amorphous material that contains tubules or vesicular structures. The amorphous material frequently includes a cytoplasmic island containing neurofilaments and other micro-organelles.","definition_xrefs":["PMID:18026741","NIF_Subcellular:nlx_subcell_20090101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Bunina body","termid":"GO:0097407"}


id: GO:0003724
data:
  {"annotated_genes":["SJAG_04650","SJAG_00887","SJAG_00786","SJAG_01182","SJAG_02382","SJAG_03923","SJAG_02287","SJAG_02879","SJAG_00616","SJAG_00597","SJAG_16455","SJAG_01315","SJAG_04480","SJAG_05276","SJAG_03730","SJAG_00898","SJAG_02061","SJAG_03479","SJAG_02686","SJAG_03157","SJAG_00986","SJAG_03886","SJAG_04230","SJAG_04589","SJAG_02835","SJAG_05025","SJAG_02991","SJAG_03897","SJAG_03533","SJAG_03193","SJAG_01152","SJAG_02295","SJAG_00583","SJAG_04772","SJAG_01499","SJAG_02242","SJAG_02558","SJAG_00798","SJAG_04081","SJAG_04118","SJAG_03077","SJAG_04974","SJAG_04669"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57177,57677,58058,58854,60172,60572,61581,62544,63861,65373,67883,69645,72163,72187,72358,74310,74469,75665,75789,75920,75931,76470,77515,79057,79390,79568,79953,80729,88122,96333,99665,100960,101733,103450,103850,106103,107596,108110,115728,116665,118971],"is_not":false,"summary":null,"term":"GO:0003724"},{"annotations":[74391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034458"},{"annotations":[100212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032574"}]},"cv_name":"molecular_function","definition":"Unwinding of an RNA helix, driven by ATP hydrolysis.","definition_xrefs":["GOC:jl","PMID:19158098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helicase activity","termid":"GO:0004386"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on RNA","termid":"GO:0008186"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00583":null,"SJAG_00597":null,"SJAG_00616":null,"SJAG_00786":null,"SJAG_00798":null,"SJAG_00887":null,"SJAG_00898":null,"SJAG_00986":null,"SJAG_01152":null,"SJAG_01182":null,"SJAG_01315":null,"SJAG_01499":null,"SJAG_02061":null,"SJAG_02242":null,"SJAG_02287":null,"SJAG_02295":null,"SJAG_02382":null,"SJAG_02558":null,"SJAG_02686":null,"SJAG_02835":null,"SJAG_02879":null,"SJAG_02991":null,"SJAG_03077":null,"SJAG_03157":null,"SJAG_03193":null,"SJAG_03479":null,"SJAG_03533":null,"SJAG_03730":null,"SJAG_03886":null,"SJAG_03897":null,"SJAG_03923":null,"SJAG_04081":null,"SJAG_04118":null,"SJAG_04230":null,"SJAG_04480":null,"SJAG_04589":null,"SJAG_04650":null,"SJAG_04669":null,"SJAG_04772":null,"SJAG_04974":null,"SJAG_05025":null,"SJAG_05276":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0140098","GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"RNA helicase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.6.4.13","Reactome:R-HSA-9770142","MetaCyc:RXN-11109","Reactome:R-HSA-9770145","Reactome:R-HSA-9770129","Reactome:R-HSA-9770131","Reactome:R-HSA-9770141","Reactome:R-HSA-72647","GO:0004004"],"synonyms":[{"name":"ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:0003724","terms_by_termid":{"GO:0003724":null,"GO:0032574":null,"GO:0034458":null}}


id: _global:directly_negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulated_by","secondary_identifiers":["RO:0002023"],"termid":"_global:directly_negatively_regulated_by"}


id: FYPO:0007241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abnormal in both of the daughter cells formed as a result of the division of a mother cell in which NETO did not occur, such that NETO is abolished in the daughter cell that inherits the parent cell's old end, and begins earlier than normal in the daughter cell that inherits parent cell's new end. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PMID:31719163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO in daughter cells","termid":"FYPO:0007240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0005568","FYPO:0000002"],"is_obsolete":false,"name":"abolished NETO in cell derived from growing end and premature NETO in cell derived from non-growing end","synonyms":[{"name":"abolished NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during mitotic cell cycle","type":"related"},{"name":"abolished NETO in cell derived from growing end and premature NETO in cell derived from non-growing end during vegetative growth","type":"exact"},{"name":"abolished cell growth mode switching, monopolar to bipolar in cell derived from growing end and premature cell growth mode switching, monopolar to bipolar in cell derived from non-growing end","type":"exact"},{"name":"abolished new end take-off in cell derived from growing end and premature new end take-off in cell derived from non-growing end","type":"exact"},{"name":"abolished switch from monopolar to bipolar cell growth in cell derived from growing end and premature switch from monopolar to bipolar cell growth in cell derived from non-growing end","type":"exact"}],"termid":"FYPO:0007241"}


id: PBO:0059822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 2","termid":"PBO:0059822"}


id: MONDO:0017427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital deformities of limbs","secondary_identifiers":["UMLS:C0206762","MedDRA:10024500","Orphanet:294944","GARD:21181","MEDGEN:60222"],"termid":"MONDO:0017427","xrefs":{"Monarch":{"xref_id":"0017427"}}}


id: MONDO:0800378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"17,20-lyase deficiency, isolated","secondary_identifiers":["MEDGEN:479479","UMLS:C3277849"],"termid":"MONDO:0800378","xrefs":{"Monarch":{"xref_id":"0800378"}}}


id: GO:1901615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organic hydroxy compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound metabolic process (obsolete GO:1901615)","synonyms":[{"name":"organic hydroxy compound metabolism","type":"exact"}],"termid":"GO:1901615"}


id: MONDO:0017743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-N-acetylgalactosaminylglycan synthesis (obsolete MONDO:0017743)","secondary_identifiers":["Orphanet:309458"],"termid":"MONDO:0017743","xrefs":{"Monarch":{"xref_id":"0017743"}}}


id: GO:0000275
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the mitochondrial hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the mitochondrial inner membrane when the entire ATP synthase is assembled.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) (obsolete GO:0000275)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0000275"}


id: MONDO:0011488
data:
  {"annotated_genes":["SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86057],"is_not":false,"summary":null,"term":"MONDO:0011488"}]},"cv_name":"mondo","definition":"Any autosomal recessive primary microcephaly in which the cause of the disease is a mutation in the CDK5RAP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 3, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:604804","UMLS:C1858108","DOID:0070286","GARD:15373","MEDGEN:347619","MESH:C565746"],"synonyms":[{"name":"CDK5RAP2 autosomal recessive primary microcephaly","type":"exact"},{"name":"MCPH3","type":"related"},{"name":"autosomal recessive primary microcephaly caused by mutation in CDK5RAP2","type":"exact"},{"name":"microcephaly 3, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0011488","terms_by_termid":{"MONDO:0011488":null},"xrefs":{"Monarch":{"xref_id":"0011488"}}}


id: MONDO:1010676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtia, non-human animal","termid":"MONDO:1010091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, pig","secondary_identifiers":["OMIA:001952-9823"],"termid":"MONDO:1010676","xrefs":{"Monarch":{"xref_id":"1010676"}}}


id: PBO:0017655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aminoacyl-tRNA hydrolase Pth2 (predicted)","termid":"PBO:0017655"}


id: PBO:0081276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 43","termid":"PBO:0081276"}


id: GO:0071367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to brassinosteroid","termid":"GO:0009741"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brassinosteroid stimulus","termid":"GO:0071367"}


id: GO:0052755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxidized coenzyme F420-(gamma-L-Glu)(n) + a quinol + H+ = reduced coenzyme F420-(gamma-L-Glu)(n) + a quinone.","definition_xrefs":["RHEA:39663","PMID:10971593","PMID:8055920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"coenzyme F420H2:quinone oxidoreductase activity","secondary_identifiers":["EC:1.1.98.4"],"synonyms":[{"name":"F420H2-dependent quinone oxidoreductase activity","type":"exact"},{"name":"F420H2:2,3-dimethyl-1,4-naphthoquinone oxidoreductase activity","type":"exact"},{"name":"F420H2:quinone oxidoreductase activity","type":"exact"},{"name":"reduced coenzyme F420:quinone oxidoreductase activity","type":"exact"}],"termid":"GO:0052755"}


id: PATO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pilosity quality inhering in a bearer by virtue of the bearer's being covered with hair or hairlike projections.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilosity","termid":"PATO:0000066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hairy","termid":"PATO:0000454"}


id: PBO:0073114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 2","termid":"PBO:0073114"}


id: PBO:0044487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 27 subfamily C member 1","termid":"PBO:0044487"}


id: PR:O94711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.11c","synonyms":[{"name":"Spom972h-gyp2","type":"exact"}],"termid":"PR:O94711"}


id: PBO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_wall_biogenesis","termid":"PBO:0030326"}


id: PBO:0091796
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.2709414_2709414insC","termid":"PBO:0091796"}


id: GO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a lipase, an enzyme that catalyzes of the hydrolysis of a lipid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"positively_regulates","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"positively_regulates","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0098772","GO:0140677","GO:0003824","GO:0030234"],"is_obsolete":false,"name":"lipase activator activity","termid":"GO:0060229"}


id: MONDO:0032628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 24","secondary_identifiers":["OMIM:618245","UMLS:C4748803","MEDGEN:1648364","DOID:0112079","GARD:16328"],"synonyms":[{"name":"MC1DN24","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 24","type":"related"}],"termid":"MONDO:0032628","xrefs":{"Monarch":{"xref_id":"0032628"}}}


id: PR:O94647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk24, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.07c","synonyms":[{"name":"Spom972h-ppk24","type":"exact"},{"name":"meiotically up-regulated gene 29 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94647"}


id: MOD:00470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS-LC-Biotin","synonyms":[{"name":"NHS-LC-Biotin","type":"related"}],"termid":"MOD:00470"}


id: FYPO:0007800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and some of the protein is present at the cell surface instead.","definition_xrefs":["PMID:33536395","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"},{"relation_name":"is_a","term_name":"protein mislocalized to cell surface during vegetative growth","termid":"FYPO:0007799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface","synonyms":[{"name":"abolished luminal ER protein retention","type":"exact"},{"name":"abolished protein localization to ER, with protein mislocalized to cell surface","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum, with protein mislocalized to cell surface during vegetative growth","type":"exact"}],"termid":"FYPO:0007800"}


id: PBO:0031112
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pleiotropic_effects_(obsolete_FYPO:0000261)","termid":"PBO:0031112"}


id: GO:0071551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RIP homotypic interaction motif (RHIM) of a protein. The RHIM is a 16-amino-acid motif found in some members, including RIP3, of a family of related kinases.","definition_xrefs":["GOC:mah","PMID:11734559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RIP homotypic interaction motif binding","synonyms":[{"name":"RHIM binding","type":"exact"}],"termid":"GO:0071551"}


id: GO:0003839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5-L-glutamyl)-L-amino acid = 5-oxoproline + L-amino acid.","definition_xrefs":["PMID:18515354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"gamma-glutamylcyclotransferase activity","secondary_identifiers":["RHEA:20505","MetaCyc:GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN","Reactome:R-HSA-1247922","EC:4.3.2.9","Reactome:R-HSA-6785928"],"synonyms":[{"name":"(5-L-glutamyl)-L-amino-acid 5-glutamyltransferase (cyclizing)","type":"exact"},{"name":"L-glutamic cyclase activity","type":"exact"},{"name":"gamma-L-glutamylcyclotransferase activity","type":"exact"},{"name":"gamma-glutamyl-amino acid cyclotransferase activity","type":"exact"}],"termid":"GO:0003839"}


id: MONDO:0008419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 1","secondary_identifiers":["OMIM:181800","UMLS:C2700406","MEDGEN:438003"],"synonyms":[{"name":"IS1","type":"exact"},{"name":"adolescent idiopathic scoliosis","type":"related"},{"name":"adolescent isolated scoliosis","type":"related"},{"name":"scoliosis, idiopathic 1","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0008419","xrefs":{"Monarch":{"xref_id":"0008419"}}}


id: PR:000027569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht1 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.1","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"hht1","type":"exact"}],"termid":"PR:000027569"}


id: PBO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase 5","termid":"PBO:0061274"}


id: MONDO:1012549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetrical occipital condylar dysplasia, non-human animal","termid":"MONDO:1011970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrical occipital condylar dysplasia, sheep","secondary_identifiers":["OMIA:002422-9940"],"termid":"MONDO:1012549","xrefs":{"Monarch":{"xref_id":"1012549"}}}


id: PBO:0060784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B10 pseudogene 2","termid":"PBO:0060784"}


id: GO:0033864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme NAD(P)H oxidase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of NAD(P)H oxidase activity","termid":"GO:0033860"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD(P)H oxidase activity","synonyms":[{"name":"activation of NAD(P)H oxidase activity","type":"narrow"},{"name":"stimulation of NAD(P)H oxidase activity","type":"narrow"},{"name":"up regulation of NAD(P)H oxidase activity","type":"exact"},{"name":"up-regulation of NAD(P)H oxidase activity","type":"exact"},{"name":"upregulation of NAD(P)H oxidase activity","type":"exact"}],"termid":"GO:0033864"}


id: MONDO:0009758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the GRM6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"GRM6-related retinopathy","termid":"MONDO:0800397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"congenital stationary night blindness 1B","secondary_identifiers":["GARD:15212","OMIM:257270","UMLS:C1850362","DOID:0110865","MEDGEN:342484"],"synonyms":[{"name":"CSNB, complete, autosomal recessive","type":"related"},{"name":"CSNB1B","type":"exact"},{"name":"GRM6 congenital stationary night blindness","type":"exact"},{"name":"autosomal recessive complete congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness 1B","type":"exact"},{"name":"congenital stationary night blindness 1B autosomal recessive","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in GRM6","type":"exact"},{"name":"congenital stationary night blindness type 1B","type":"exact"},{"name":"night blindness, congenital stationary (complete), 1B, autosomal recessive","type":"exact"},{"name":"night blindness, congenital stationary, complete, autosomal recessive","type":"related"},{"name":"night blindness, congenital stationary, type 1B","type":"related"}],"termid":"MONDO:0009758","xrefs":{"Monarch":{"xref_id":"0009758"}}}


id: PBO:0068787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 24, pseudogene","termid":"PBO:0068787"}


id: MONDO:0017787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"erythroderma desquamativum","secondary_identifiers":["MESH:C535512","MEDGEN:1790529","Orphanet:314","HGNC:1331","GARD:6878","UMLS:C5551904"],"synonyms":[{"name":"Leiner disease","type":"exact"},{"name":"Leiner-Moussous desquamative erythroderma","type":"related"},{"name":"erythroderma desquamativa of Leiner","type":"related"},{"name":"erythroderma desquamativum of infancy","type":"related"},{"name":"generalised erythroderma, diarrhea, and failure to thrive","type":"related"},{"name":"generalized erythroderma, diarrhea, and failure to thrive","type":"related"}],"termid":"MONDO:0017787","xrefs":{"Monarch":{"xref_id":"0017787"}}}


id: MONDO:0013725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary nonpolyposis colon cancer in which the cause of the disease is a mutation in the MLH3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Lynch syndrome","termid":"MONDO:0005835"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary nonpolyposis colon cancer","termid":"MONDO:0018630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal cancer, hereditary nonpolyposis, type 7","secondary_identifiers":["MEDGEN:346893","GARD:15799","MESH:C565777","OMIM:614385","UMLS:C1858380","DOID:0070276"],"synonyms":[{"name":"HNPCC7","type":"related"},{"name":"MLH3 hereditary nonpolyposis colon cancer","type":"exact"},{"name":"colorectal cancer, hereditary nonpolyposis, type 7","type":"exact"},{"name":"hereditary nonpolyposis colon cancer caused by mutation in MLH3","type":"exact"}],"termid":"MONDO:0013725","xrefs":{"Monarch":{"xref_id":"0013725"}}}


id: FYPO:0005156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype characterized by altered ascus morphology, i.e. the size, shape, or structure of the ascus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascus morphology","termid":"FYPO:0005156"}


id: GO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + terephthalate = (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+.","definition_xrefs":["RHEA:10312","EC:1.14.12.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"terephthalate 1,2-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0150","KEGG_REACTION:R05148","MetaCyc:1.14.12.15-RXN"],"synonyms":[{"name":"1,4-dicarboxybenzoate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate 1,2-dioxygenase activity","type":"related"},{"name":"benzene-1,4-dicarboxylate,NADH:oxygen oxidoreductase (1,2-hydroxylating)","type":"related"}],"termid":"GO:0018628"}


id: PBO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe CAspase 1","termid":"PBO:0005813"}


id: PBO:0050521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D9","termid":"PBO:0050521"}


id: GO:0102793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate + soyasapogenol B = H+ + UDP + soyasapogenol B 3-O-beta-glucuronate.","definition_xrefs":["EC:2.4.1.262","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"soyasapogenol B glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8086","RHEA:31475"],"termid":"GO:0102793"}


id: PBO:0078867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 2","termid":"PBO:0078867"}


id: PBO:0030423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_endoplasmic_reticulum_membrane_present","termid":"PBO:0030423"}


id: PBO:0056097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 2","termid":"PBO:0056097"}


id: FYPO:0004037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to mercury ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to mercury ion","synonyms":[{"name":"decreased protein accumulation during cellular response to mercury ion","type":"related"},{"name":"decreased protein level during cellular response to mercury","type":"exact"},{"name":"decreased protein level during cellular response to mercury ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to mercury ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to mercury ion","type":"exact"}],"termid":"FYPO:0004037"}


id: PBO:0070887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL15 pseudogene 19","termid":"PBO:0070887"}


id: GO:2000007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metanephric comma-shaped body morphogenesis.","definition_xrefs":["GOC:obol","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of metanephric comma-shaped body morphogenesis","termid":"GO:2000006"},{"relation_name":"negatively_regulates","term_name":"metanephric comma-shaped body morphogenesis","termid":"GO:0072278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric comma-shaped body morphogenesis","termid":"GO:2000007"}


id: PBO:0084691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial cytochrome-c peroxidase; degrades reactive oxygen species in mitochondria; acts as hydrogen peroxide sensor in mitochondria, involved in the response to oxidative stress","termid":"PBO:0084691"}


id: MONDO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Landy-Donnai syndrome","secondary_identifiers":["UMLS:C2931460","MEDGEN:419417","MESH:C537266"],"synonyms":[{"name":"hydrops, ectrodactyly, syndactyly, duplication of the great toes","type":"related"}],"termid":"MONDO:0043114","xrefs":{"Monarch":{"xref_id":"0043114"}}}


id: MONDO:0006602
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352","SJAG_03349","SJAG_04865","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87451,87450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[86499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[86362,86361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"A clonal proliferation of abnormal keratinocytes characterized by the development of localized or multiple atrophic skin patches surrounded by an annular keratotic ring called cornoid lamella.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_01474":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79358","GARD:18989","MedDRA:10036175","icd11.foundation:29524620","ICD9:757.39","ICD9:692.75","UMLS:C0162839","DOID:3805","EFO:1000757","NCIT:C85019","SCTID:400080004","HP:0200044","OMIMPS:175800","Wikipedia:Porokeratosis","MEDGEN:56518","MESH:D017499"],"synonyms":[{"name":"porokeratosis","type":"exact"},{"name":"porokeratosis (disease)","type":"exact"}],"termid":"MONDO:0006602","terms_by_termid":{"MONDO:0008293":null,"MONDO:0013868":null,"MONDO:0014713":null},"xrefs":{"Monarch":{"xref_id":"0006602"}}}


id: GO:0070455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heme biosynthetic process","termid":"GO:0070453"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of heme biosynthetic process","synonyms":[{"name":"activation of heme biosynthetic process","type":"narrow"},{"name":"positive regulation of haem biosynthetic process","type":"exact"},{"name":"positive regulation of heme anabolism","type":"exact"},{"name":"positive regulation of heme biosynthesis","type":"exact"},{"name":"positive regulation of heme formation","type":"exact"},{"name":"positive regulation of heme synthesis","type":"exact"},{"name":"stimulation of heme biosynthetic process","type":"narrow"},{"name":"up regulation of heme biosynthetic process","type":"exact"},{"name":"up-regulation of heme biosynthetic process","type":"exact"},{"name":"upregulation of heme biosynthetic process","type":"exact"}],"termid":"GO:0070455"}


id: PBO:0056675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A","termid":"PBO:0056675"}


id: GO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + a quinone = 7,9,9'-tri-cis-neurosporene + a quinol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,9'-dicis-carotene:quinone oxidoreductase activity (obsolete GO:0052886)","termid":"GO:0052886"}


id: FYPO:0003200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at a transcription regulatory region by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to phosphate starvation. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription regulatory region sequence-specific DNA binding","termid":"FYPO:0007382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal transcription regulatory region sequence-specific DNA binding during cellular response to phosphate starvation","synonyms":[{"name":"normal promoter binding during cellular response to phosphate starvation","type":"related"},{"name":"normal sequence-specific DNA binding at transcription regulatory region during cellular response to phosphate starvation","type":"exact"},{"name":"normal transcription regulatory region binding during cellular response to phosphate starvation","type":"exact"},{"name":"normal transcription regulatory region binding during phosphate starvation","type":"exact"}],"termid":"FYPO:0003200"}


id: PBO:0041438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 50","termid":"PBO:0041438"}


id: MONDO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 6q23.","definition_xrefs":["PMID:22083234","DOID:0110385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 63","secondary_identifiers":["OMIM:614494","GARD:15810","MEDGEN:482632","ICD10CM:H35.5","UMLS:C3281002"],"synonyms":[{"name":"RP63","type":"exact"},{"name":"retinitis pigmentosa 63","type":"exact"},{"name":"retinitis pigmentosa type 63","type":"exact"}],"termid":"MONDO:0013780","xrefs":{"Monarch":{"xref_id":"0013780"}}}


id: MOD:01135
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hex-HexNAc","termid":"MOD:01135"}


id: PBO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-continuous_with","termid":"PBO:0034054"}


id: PR:Q9Y7J2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lam2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1778.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.05c","synonyms":[{"name":"Spom972h-lam2","type":"exact"}],"termid":"PR:Q9Y7J2"}


id: PBO:0110402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group)","termid":"PBO:0110402"}


id: MONDO:0859372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic, 29, with polyglucosan bodies","secondary_identifiers":["UMLS:C5774308","OMIM:620236","MEDGEN:1824081"],"termid":"MONDO:0859372","xrefs":{"Monarch":{"xref_id":"0859372"}}}


id: GO:0034486
data:
  {"annotated_genes":["SJAG_03497","SJAG_04698","SJAG_02029","SJAG_01344","SJAG_05213","SJAG_03256","SJAG_03899","SJAG_00877","SJAG_03400","SJAG_01990","SJAG_03401","SJAG_01080","SJAG_01319","SJAG_03442","SJAG_04725","SJAG_00051"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73817],"is_not":false,"summary":null,"term":"GO:0034486"},{"annotations":[77391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032974"},{"annotations":[103115,110335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990591"},{"annotations":[90735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"},{"annotations":[94929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034490"},{"annotations":[118501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[115864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[97383,118503,96403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[97684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[104147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[104149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"},{"annotations":[97685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[104150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[103117,104151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901482"},{"annotations":[97686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[110337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[104153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[104154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[118504,96404,97384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[89445,114817,106994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180042"},{"annotations":[114645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"}]},"cv_name":"biological_process","definition":"The process in which a solute is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_01080":null,"SJAG_01319":null,"SJAG_01344":null,"SJAG_01990":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03401":null,"SJAG_03442":null,"SJAG_03497":null,"SJAG_03899":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vacuolar transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar membrane transport","type":"exact"}],"termid":"GO:0034486","terms_by_termid":{"GO:0032974":null,"GO:0034486":null,"GO:0034488":null,"GO:0034490":null,"GO:0036246":null,"GO:0036249":null,"GO:0071996":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0140146":null,"GO:0140147":null,"GO:0180042":null,"GO:1901482":null,"GO:1990591":null,"GO:1990818":null}}


id: GO:0006284
data:
  {"annotated_genes":["SJAG_02261","SJAG_02908","SJAG_00198","SJAG_01262","SJAG_01971","SJAG_02818","SJAG_16460","SJAG_03722","SJAG_01119","SJAG_04418","SJAG_02680","SJAG_02334","SJAG_02298","SJAG_05257","SJAG_01648","SJAG_03665","SJAG_02528","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62731,70438,73590,80271,92899,94041,96207,106262,116550,119235],"is_not":false,"summary":null,"term":"GO:0006284"},{"annotations":[77389,62744,74460,57323],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006285"},{"annotations":[78608],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097510"},{"annotations":[74536,75381],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006287"},{"annotations":[95200],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"In base excision repair, an altered base is removed by a DNA glycosylase enzyme, followed by excision of the resulting sugar phosphate. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_01119":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01971":null,"SJAG_02261":null,"SJAG_02298":null,"SJAG_02334":null,"SJAG_02528":null,"SJAG_02680":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03665":null,"SJAG_03722":null,"SJAG_03724":null,"SJAG_04418":null,"SJAG_05257":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"base-excision repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-73930","Wikipedia:Base_excision_repair","Reactome:R-HSA-73884"],"synonyms":[{"name":"BER","type":"exact"}],"termid":"GO:0006284","terms_by_termid":{"GO:0006284":null,"GO:0006285":null,"GO:0006287":null,"GO:0045007":null,"GO:0097510":null}}


id: GO:1900895
data:
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id: GO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction GTP + molybdenum cofactor = diphosphate + guanylyl molybdenum cofactor.","definition_xrefs":["EC:2.7.7.77","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"molybdenum cofactor guanylyltransferase activity","secondary_identifiers":["RHEA:34243"],"termid":"GO:0061603"}


id: FYPO:0006129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of nuclear migration involved in conjugation with cellular fusion is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased nuclear migration during mating (obsolete FYPO:0006129)","synonyms":[{"name":"decreased nuclear migration involved in conjugation with cellular fusion","type":"exact"},{"name":"decreased nuclear movement during mating","type":"exact"},{"name":"decreased nuclear movement during shmooing","type":"related"},{"name":"reduced nuclear migration during mating","type":"exact"}],"termid":"FYPO:0006129"}


id: GO:0003980
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  {"annotated_genes":["SJAG_04571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79920],"is_not":false,"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of UDP-glucose on to asparagine-linked (N-linked) oligosaccharides of the form Man7-9GlcNAc2 on incorrectly folded glycoproteins.","definition_xrefs":["PMID:10764828","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-548884","RHEA:61304"],"synonyms":[{"name":"UGGT activity","type":"exact"}],"termid":"GO:0003980","terms_by_termid":{"GO:0003980":null}}


id: GO:1990816
data:
  {"annotated_genes":["SJAG_02578","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90557,94653],"is_not":false,"summary":null,"term":"GO:1990816"}]},"cv_name":"cellular_component","definition":"A zone of apposition between the vacuolar membrane and the mitochondrial outer membrane, important for transfer of lipids between the two organelles.","definition_xrefs":["PMID:25026036","PMID:25026035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02578":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vacuole-mitochondrion membrane contact site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vCLAMP","type":"exact"},{"name":"vacuole and mitochondria patch","type":"exact"}],"termid":"GO:1990816","terms_by_termid":{"GO:1990816":null}}


id: PBO:0034327
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_during_or_after","termid":"PBO:0034327"}


id: MONDO:0002494
data:
  {"annotated_genes":["SJAG_01457","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007079"},{"annotations":[85542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012454"}]},"cv_name":"mondo","definition":"A category of psychiatric disorders which include disorders related to the taking of a drug of abuse (including alcohol, prescribed medications and recreational drugs).","definition_xrefs":["NCIT:C92203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"substance-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0236969","DOID:303","MEDGEN:66746","MESH:D019966","ICD10CM:F10-F19"],"synonyms":[{"name":"substance induced mood disorders","type":"exact"},{"name":"substance-related disorder","type":"exact"}],"termid":"MONDO:0002494","terms_by_termid":{"MONDO:0007079":null,"MONDO:0012454":null},"xrefs":{"Monarch":{"xref_id":"0002494"}}}


id: PBO:0047435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 6","termid":"PBO:0047435"}


id: MONDO:0016031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism-anorexia-cachexia-eye and skin anomalies syndrome","secondary_identifiers":["MEDGEN:419355","GARD:2221","UMLS:C2931183","MESH:C536384","Orphanet:1969"],"synonyms":[{"name":"Friedman-Goodman syndrome","type":"exact"},{"name":"faces syndrome","type":"exact"},{"name":"facial features (unique), anorexia, cachexia, eye and skin anomalies","type":"related"}],"termid":"MONDO:0016031","xrefs":{"Monarch":{"xref_id":"0016031"}}}


id: GO:0042723
data:
  {"annotated_genes":["SJAG_02047","SJAG_03362","SJAG_02406","SJAG_04282","SJAG_02421","SJAG_01742","SJAG_04067","SJAG_01970","SJAG_03538","SJAG_00381","SJAG_04866","SJAG_02420","SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113988,89378],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[74292,77505,61722,78775,74371,70516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[65999,113894,78582,113900,67673,116321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[66342,59042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[110758,99852,110759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiamine (vitamin B1), and compounds derived from it.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiamine-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-196819"],"synonyms":[{"name":"thiamin and derivative metabolic process","type":"exact"},{"name":"thiamin and derivative metabolism","type":"exact"},{"name":"thiamin-containing compound metabolic process","type":"exact"},{"name":"thiamine and derivative metabolic process","type":"exact"},{"name":"thiamine and derivative metabolism","type":"exact"},{"name":"thiamine-containing compound metabolism","type":"exact"},{"name":"vitamin B1 and derivative metabolic process","type":"exact"},{"name":"vitamin B1 and derivative metabolism","type":"exact"}],"termid":"GO:0042723","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0009229":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:1904317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GO_REF:0000071","PMID:9321918","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","termid":"GO:1904316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"cellular response to PAF","type":"exact"},{"name":"cellular response to platelet-activating factor","type":"exact"}],"termid":"GO:1904317"}


id: GO:1990588
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for prokaryotic cell division (FtsZ-dependent cytokinesis). Part of the divisome. Assembled independently of the other divisome components in the cytoplasm prior to transport to the cell septum. In E. coli consists of FtsB and FtsL.","definition_xrefs":["PMID:15165235","GOC:bhm","PMID:21784946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"divisome complex","termid":"GO:1990586"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"},{"relation_name":"part_of","term_name":"FtsQBL complex","termid":"GO:1990587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"FtsBL complex","synonyms":[{"name":"FtsB-FtsL complex","type":"exact"}],"termid":"GO:1990588"}


id: GO:0043983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K12 acetylation (obsolete GO:0043983)","synonyms":[{"name":"histone H4 acetylation at K12","type":"exact"}],"termid":"GO:0043983"}


id: PBO:0053344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 222","termid":"PBO:0053344"}


id: PBO:0044039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 11","termid":"PBO:0044039"}


id: GO:0062010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the primitive palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"roof of mouth development","termid":"GO:0060021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive palate development","termid":"GO:0062010"}


id: GO:0061727
data:
  {"annotated_genes":["SJAG_02106","SJAG_02988","SJAG_01596","SJAG_02960","SJAG_04404","SJAG_04674","SJAG_04726"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59284,61046,105371],"is_not":false,"summary":null,"term":"GO:0061727"},{"annotations":[74832,103110,73289,61047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into lactate.","definition_xrefs":["GOC:dph","PMID:2198020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"},{"relation_name":"is_a","term_name":"methylglyoxal catabolic process","termid":"GO:0051596"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylglyoxal catabolic process to lactate","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0061727","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: GO:0019941
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id: PBO:0041903
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id: PBO:0026752
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id: GO:0010976
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id: PBO:0079776
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id: PBO:0045703
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id: GO:0046709
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id: PATO:0002348
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id: GO:1990557
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id: FYPO:0004651
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id: GO:0140513
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id: FYPO:0008320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cell morphology (i.e. the size, shape, or structure of the cell) is altered when the cell is subject to sulfur deprivation.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"abnormal cell morphology during sulphur deprivation","termid":"FYPO:0008320"}


id: GO:1903386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:21724833","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"negatively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of homophilic cell adhesion","synonyms":[{"name":"down regulation of homophilic cell adhesion","type":"exact"},{"name":"down-regulation of homophilic cell adhesion","type":"exact"},{"name":"downregulation of homophilic cell adhesion","type":"exact"},{"name":"inhibition of homophilic cell adhesion","type":"narrow"}],"termid":"GO:1903386"}


id: GO:0140835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphothreonine (position 4).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0140096","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain T4 kinase activity","type":"exact"}],"termid":"GO:0140835"}


id: GO:0015346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ferric triacetylfusarinine C(out) + H+(out) = ferric triacetylfusarinine C(in) + H+(in).","definition_xrefs":["TC:2.A.1.16.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"ferric triacetylfusarinine C transmembrane transporter activity","termid":"GO:0015621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ferric triacetylfusarinine C:proton symporter activity","synonyms":[{"name":"ferric triacetylfusarinine C:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015346"}


id: GO:0019444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan into other compounds, including catechol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolalkylamine metabolic process","termid":"GO:0006586"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-tryptophan catabolic process to catechol","secondary_identifiers":["MetaCyc:TRPCAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to catechol","type":"exact"},{"name":"tryptophan catabolic process to catechol","type":"exact"},{"name":"tryptophan degradation to catechol","type":"exact"}],"termid":"GO:0019444"}


id: MONDO:0007904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Median nodule of the upper lip is a minor trait of the lip transmitted in an autosomal dominant fashion.","definition_xrefs":["Orphanet:2699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"median nodule of the upper lip","secondary_identifiers":["SCTID:722034006","GARD:3440","UMLS:C1835396","MEDGEN:372034","OMIM:151630"],"synonyms":[{"name":"LIP, MEDIAN NODULE of upper","type":"related"}],"termid":"MONDO:0007904","xrefs":{"Monarch":{"xref_id":"0007904"}}}


id: PBO:0050037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 5","termid":"PBO:0050037"}


id: PBO:0080894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F3","termid":"PBO:0080894"}


id: PBO:0067854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 156","termid":"PBO:0067854"}


id: PBO:0110411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 2 (CTL2 blood group)","termid":"PBO:0110411"}


id: PBO:0109260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120 member C","termid":"PBO:0109260"}


id: PBO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine hydroxymethyltransferase (predicted)","termid":"PBO:0001867"}


id: PBO:0085554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing a C-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization; protein abundance increases in response to DNA replication stress; LSB3 has a paralog, YSC84, that arose from the whole genome duplication","termid":"PBO:0085554"}


id: PATO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only one chromosome from a pair in a cell's nucleus.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Monosomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"PATO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy","termid":"PATO:0001386"}


id: FYPO:0008200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a lower extent than normal at the centromere inner repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}


id: GO:1905173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eukaryotic translation initiation factor 2B complex.","definition_xrefs":["GOC:TermGenie","PMID:27023709","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B complex assembly","synonyms":[{"name":"eIF-2B assembly","type":"exact"},{"name":"eIF-2B formation","type":"exact"},{"name":"eif2B assembly","type":"exact"},{"name":"eif2B formation","type":"exact"},{"name":"eukaryotic translation initiation factor 2B complex formation","type":"exact"}],"termid":"GO:1905173"}


id: GO:0009730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a carbohydrate stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of carbohydrate stimulus","synonyms":[{"name":"perception of carbohydrate stimulus","type":"related"}],"termid":"GO:0009730"}


id: PBO:0050742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 4","termid":"PBO:0050742"}


id: GO:0141108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a transporter.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"},{"relation_name":"regulates","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"transporter regulator activity","termid":"GO:0141108"}


id: PBO:0060115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 16","termid":"PBO:0060115"}


id: GO:0098624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylylselenate + NADPH => adenosine 3',5'-bisphosphate + selenite + NADP+ + H+.","definition_xrefs":["PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3'-phosphoadenylylselenate reductase activity","secondary_identifiers":["Reactome:R-HSA-2408548"],"synonyms":[{"name":"PAPSe reductase activity","type":"exact"}],"termid":"GO:0098624"}


id: GO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte differentiation","synonyms":[{"name":"monocyte cell differentiation","type":"exact"}],"termid":"GO:0030224"}


id: FYPO:0007718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal SMN complex assembly","synonyms":[{"name":"abnormal SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007718"}


id: PBO:0067322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 413, pseudogene","termid":"PBO:0067322"}


id: MONDO:0026733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked, syndromic, Hackmann-Di Donato type","secondary_identifiers":["OMIM:301039","UMLS:C5393302","MEDGEN:1716269"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, HACKMANN-DI DONATO TYPE","type":"related"},{"name":"MRXSHD","type":"related"},{"name":"Mental Retardation, X-Linked, With Marfanoid Habitus, 2","type":"related"},{"name":"intellectual developmental disorder, X-linked, syndromic, Hackman-Di Donato type, X-linked recessive","type":"exact"}],"termid":"MONDO:0026733","xrefs":{"Monarch":{"xref_id":"0026733"}}}


id: PBO:0111056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 22 (non-protein coding)","termid":"PBO:0111056"}


id: PBO:0050433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 4","termid":"PBO:0050433"}


id: PBO:0080685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain, phosphoinositide interacting 2","termid":"PBO:0080685"}


id: PBO:0031648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_G2_phase_progression","termid":"PBO:0031648"}


id: PBO:0034269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_progenesis_relationship_with","termid":"PBO:0034269"}


id: GO:0043121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin, any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"neurotrophin binding","secondary_identifiers":["GO:0048404","GO:0048405"],"synonyms":[{"name":"NT 4/5 binding","type":"narrow"},{"name":"NT-3 binding","type":"narrow"},{"name":"NT-4 binding","type":"narrow"},{"name":"NT-4/5 binding","type":"narrow"},{"name":"NT-5 binding","type":"narrow"},{"name":"NT3 binding","type":"narrow"},{"name":"NT4 binding","type":"narrow"},{"name":"NT5 binding","type":"narrow"},{"name":"neurotrophic factor binding","type":"exact"},{"name":"neurotrophin 3 binding","type":"narrow"},{"name":"neurotrophin 4/5 binding","type":"narrow"},{"name":"neurotrophin TRK receptor activity","type":"related"},{"name":"neurotrophin TRKA receptor activity","type":"related"},{"name":"neurotrophin TRKB receptor activity","type":"related"},{"name":"neurotrophin TRKC receptor activity","type":"related"},{"name":"neurotrophin-3 binding","type":"narrow"},{"name":"neurotrophin-4/5 binding","type":"narrow"}],"termid":"GO:0043121"}


id: RO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"bearer_of","termid":"RO:0000053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_role","termid":"RO:0000087"}


id: FYPO:0001981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of DNA replication","synonyms":[{"name":"reduced rate of DNA replication","type":"exact"}],"termid":"FYPO:0001981"}


id: PBO:0060434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAC alpha domain containing","termid":"PBO:0060434"}


id: PR:Q9P382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup82 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup82 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.02","synonyms":[{"name":"Spom972h-nup82","type":"exact"},{"name":"nuclear pore protein nup82 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P382"}


id: MONDO:0022862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cormier Rustin Munnich syndrome","termid":"MONDO:0022862","xrefs":{"Monarch":{"xref_id":"0022862"}}}


id: PBO:0084030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in manganese homeostasis; overproduction suppresses the sod1 (copper, zinc superoxide dismutase) null mutation","termid":"PBO:0084030"}


id: MONDO:0021001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemochromatosis type 1 (classic) is the most common form of hereditary hemochromatosis (HH), a group of diseases characterized by excessive tissue iron deposition. Due to its incidence (1/200-1/1000), it is not considered as a rare disease, unlike the other subforms of the disease","definition_xrefs":["EFO:0006513"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hereditary hemochromatosis (obsolete MONDO:0016363)","termid":"MONDO:0016363"},{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 1","secondary_identifiers":["OMIM:235200","Orphanet:139498","ICD9:275.01","MEDGEN:854011","NCIT:C84764","SCTID:35400008","DOID:0111029","UMLS:C3469186"],"synonyms":[{"name":"C282Y/C282Y hemochromatosis","type":"exact"},{"name":"HFE-associated hereditary hemochromatosis","type":"exact"},{"name":"HFE-related hemochromatosis","type":"exact"},{"name":"HFE1","type":"exact"},{"name":"classic hemochromatosis","type":"exact"},{"name":"hemochromatosis","type":"exact"},{"name":"hemochromatosis type 1","type":"exact"},{"name":"hemochromatosis, type 1","type":"exact"},{"name":"hfe hemochromatosis, modifier of","type":"exact"},{"name":"symptomatic form of HFE-related hereditary hemochromatosis","type":"narrow"},{"name":"symptomatic form of classic hemochromatosis","type":"narrow"},{"name":"symptomatic form of hemochromatosis type 1","type":"exact"}],"termid":"MONDO:0021001","xrefs":{"Monarch":{"xref_id":"0021001"}}}


id: PBO:0017016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster protein (predicted)","termid":"PBO:0017016"}


id: PBO:0040958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 29","termid":"PBO:0040958"}


id: SO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed pseudogene where there is evidence, (mass spec data) suggesting that it is also translated.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_processed_pseudogene","synonyms":[{"name":"translated processed pseudogene","type":"exact"}],"termid":"SO:0002105"}


id: MONDO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the hepatic flexure of colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"ascending colon cancer","termid":"MONDO:0002238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"hepatic flexure cancer","secondary_identifiers":["DOID:260","MEDGEN:509289","UMLS:C0153433","ICD9:153.0","SCTID:363407001"],"synonyms":[{"name":"Ca hepatic flexure - colon","type":"exact"},{"name":"cancer of hepatic flexure of colon","type":"exact"},{"name":"hepatic flexure of colon cancer","type":"exact"},{"name":"malignant hepatic flexure of colon neoplasm","type":"exact"},{"name":"malignant neoplasm of hepatic flexure","type":"exact"},{"name":"malignant neoplasm of hepatic flexure of colon","type":"exact"},{"name":"malignant tumor of hepatic flexure","type":"exact"},{"name":"malignant tumour of hepatic flexure","type":"exact"}],"termid":"MONDO:0002357","xrefs":{"Monarch":{"xref_id":"0002357"}}}


id: PBO:0063615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6","termid":"PBO:0063615"}


id: PBO:0027473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mtDNA_absent_from_cell","termid":"PBO:0027473"}


id: PBO:0028779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0028779"}


id: PBO:0041325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 76","termid":"PBO:0041325"}


id: FYPO:0006133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytosphingosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phytosphingosine level","synonyms":[{"name":"increased cellular phytosphingosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phytosphingosine level during vegetative growth","type":"exact"},{"name":"increased phytosphingosine accumulation","type":"related"}],"termid":"FYPO:0006133"}


id: PBO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor interacting protein","termid":"PBO:0051961"}


id: MOD:00241
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-hydroxymethyl-L-asparagine.","definition_xrefs":["RESID:AA0236","Unimod:414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-hydroxymethyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-[(hydroxymethyl)amino]-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-hydroxymethylbutanediamic acid","type":"exact"},{"name":"Hydroxymethyl","type":"related"},{"name":"N(gamma)-hydroxymethylasparagine","type":"exact"},{"name":"N4-hydroxymethyl-L-asparagine","type":"exact"},{"name":"N4-hydroxymethylasparagine","type":"exact"},{"name":"beta-hydroxymethylasparagine","type":"exact"},{"name":"hydroxymethyl","type":"related"}],"termid":"MOD:00241"}


id: MONDO:0019129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of global developmental delay, osteopenia and skin anomalies.","definition_xrefs":["Orphanet:73223"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"global developmental delay-osteopenia-ectodermal defect syndrome","secondary_identifiers":["MEDGEN:929239","GARD:18919","UMLS:C4303570","SCTID:717813005"],"termid":"MONDO:0019129","xrefs":{"Monarch":{"xref_id":"0019129"}}}


id: PR:Q9C0V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB7E8.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB7E8.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB7E8.01","synonyms":[{"name":"Spom972h-SPBPB7E8.01","type":"exact"}],"termid":"PR:Q9C0V5"}


id: MONDO:0020084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lymphoproliferative disease associated with primary immune disease (obsolete MONDO:0020084)","secondary_identifiers":["Orphanet:98291"],"termid":"MONDO:0020084","xrefs":{"Monarch":{"xref_id":"0020084"}}}


id: PR:O74876
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug135 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 135 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.04c","synonyms":[{"name":"Spom972h-mug135","type":"exact"}],"termid":"PR:O74876"}


id: MONDO:0018198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute encephalopathy with biphasic seizures and late reduced diffusion (AESD) is a rare childhood-onset epilepsy syndrome associated with infection and characterized by a biphasic clinical course. The initial symptom is a prolonged febrile seizure on day 1 (the first phase). Afterwards, patients have variable levels of consciousness from normal to coma. Irrespective of the consciousness levels, magnetic resonance imaging (MRI) during the first 2 days shows no abnormality. During the second phase (usually days 4 - 6), patients show a cluster of seizures and deterioration of consciousness. Diffusion-weighted images (DWI) on MRI reveal the brain lesions with reduced diffusion predominantly in the subcortical white matter. After the second acute phase, consciousness levels improve with the emerging focal neurological signs. Neurological outcomes of AESD vary from normal to mild or severe sequelae including cerebral atrophy, mental retardation, paralysis and epilepsy.","definition_xrefs":["Orphanet:363549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"acute encephalopathy with biphasic seizures and late reduced diffusion","secondary_identifiers":["GARD:21552","NANDO:2100247","NANDO:1200552","SCTID:766044005","UMLS:C4707658","NANDO:2200901","MEDGEN:1645136"],"synonyms":[{"name":"AESD","type":"exact"},{"name":"AIEF","type":"exact"},{"name":"acute infantile encephalopathy predominantly affecting the frontal lobes","type":"exact"}],"termid":"MONDO:0018198","xrefs":{"Monarch":{"xref_id":"0018198"}}}


id: MONDO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycophenolate mofetil (MMF) embryopathy is a malformative syndrome due to the teratogenic effect of MMF, an effective immunosuppressive agent widely used for the prevention of organ rejection after organ transplantation.","definition_xrefs":["Orphanet:268249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mycophenolate mofetil embryopathy","secondary_identifiers":["SCTID:723406000","UMLS:C4509879","icd11.foundation:2111105927","GARD:20946","MEDGEN:1387699"],"synonyms":[{"name":"MMF embryopathy","type":"exact"}],"termid":"MONDO:0017055","xrefs":{"Monarch":{"xref_id":"0017055"}}}


id: FYPO:0000158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of DNA in a cell is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"DNA content increased","termid":"FYPO:0002729"},{"relation_name":"is_a","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"DNA content increased during vegetative growth","synonyms":[{"name":"DNA content increased during mitotic cell cycle","type":"related"},{"name":"increased DNA content during vegetative growth","type":"exact"},{"name":"increased DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0000158"}


id: PBO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk19","termid":"PBO:0003310"}


id: PBO:0108546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage factor complex RNA-binding protein Rna15","termid":"PBO:0108546"}


id: PBO:0046135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A","termid":"PBO:0046135"}


id: GO:1901032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to reactive oxygen species.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to reactive oxygen species","termid":"GO:1901031"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to reactive oxygen species","synonyms":[{"name":"down regulation of response to AOS","type":"exact"},{"name":"down regulation of response to ROI","type":"exact"},{"name":"down regulation of response to ROS","type":"exact"},{"name":"down regulation of response to active oxygen species","type":"exact"},{"name":"down regulation of response to reactive oxidative species","type":"exact"},{"name":"down regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down regulation of response to reactive oxygen species","type":"exact"},{"name":"down-regulation of response to AOS","type":"exact"},{"name":"down-regulation of response to ROI","type":"exact"},{"name":"down-regulation of response to ROS","type":"exact"},{"name":"down-regulation of response to active oxygen species","type":"exact"},{"name":"down-regulation of response to reactive oxidative species","type":"exact"},{"name":"down-regulation of response to reactive oxygen intermediate","type":"exact"},{"name":"down-regulation of response to reactive oxygen species","type":"exact"},{"name":"downregulation of response to AOS","type":"exact"},{"name":"downregulation of response to ROI","type":"exact"},{"name":"downregulation of response to ROS","type":"exact"},{"name":"downregulation of response to active oxygen species","type":"exact"},{"name":"downregulation of response to reactive oxidative species","type":"exact"},{"name":"downregulation of response to reactive oxygen intermediate","type":"exact"},{"name":"downregulation of response to reactive oxygen species","type":"exact"},{"name":"inhibition of response to AOS","type":"exact"},{"name":"inhibition of response to ROI","type":"exact"},{"name":"inhibition of response to ROS","type":"exact"},{"name":"inhibition of response to active oxygen species","type":"exact"},{"name":"inhibition of response to reactive oxidative species","type":"exact"},{"name":"inhibition of response to reactive oxygen intermediate","type":"exact"},{"name":"inhibition of response to reactive oxygen species","type":"narrow"},{"name":"negative regulation of response to AOS","type":"exact"},{"name":"negative regulation of response to ROI","type":"exact"},{"name":"negative regulation of response to ROS","type":"exact"},{"name":"negative regulation of response to active oxygen species","type":"exact"},{"name":"negative regulation of response to reactive oxidative species","type":"exact"},{"name":"negative regulation of response to reactive oxygen intermediate","type":"exact"}],"termid":"GO:1901032"}


id: PR:Q9P7L0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C21C3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.14c","synonyms":[{"name":"Spom972h-SPBC21C3.14c","type":"exact"}],"termid":"PR:Q9P7L0"}


id: PBO:0087024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L11B; expressed at half the level of Rpl11Ap; involved in ribosomal assembly; depletion causes degradation of 60S proteins and RNA; homologous to mammalian ribosomal protein L11 and bacterial L5; RPL11B has a paralog, RPL11A, that arose from the whole genome duplication","termid":"PBO:0087024"}


id: RO:HOM0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that involves genes from different species.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_between-species_paralogy_relationship_with","synonyms":[{"name":"between-species paralogous to","type":"exact"}],"termid":"RO:HOM0000050"}


id: PBO:0084023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosyltransferase involved in protein glycosylation; transfers GDP-mannose to methyl-alpha-mannoside in vitro; member of the KRE2/MNT1 mannosyltransferase family of type II membrane proteins with a short cytoplasmic N-terminus, a membrane-spanning region and a highly conserved catalytic lumenal domain","termid":"PBO:0084023"}


id: GO:0048453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the sepal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal formation","secondary_identifiers":["GO:0048423"],"termid":"GO:0048453"}


id: FYPO:0003204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain a detectable secondary cell septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"secondary cell septum absent from cell during vegetative growth","synonyms":[{"name":"absent secondary cell septum during vegetative growth","type":"exact"},{"name":"secondary cell septum absent from cell during mitotic cell cycle","type":"related"},{"name":"secondary septum absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003204"}


id: PBO:0065276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich coiled-coil 1","termid":"PBO:0065276"}


id: PBO:0018251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1","termid":"PBO:0018251"}


id: PBO:0063435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 9","termid":"PBO:0063435"}


id: FYPO:0000591
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000595"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal transposable element transposition","type":"exact"},{"name":"abnormal transposition during mitotic cell cycle","type":"related"},{"name":"abnormal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: abnormal","type":"related"}],"termid":"FYPO:0000591","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000595":null,"FYPO_EXT:0000001":null}}


id: PBO:0108598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_changes_to_anatomical_or_cellular_structure","termid":"PBO:0108598"}


id: PBO:0108948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 5","termid":"PBO:0108948"}


id: PR:Q9UUD9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17G9.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G9.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.13c","synonyms":[{"name":"Spom972h-SPBC17G9.13c","type":"exact"}],"termid":"PR:Q9UUD9"}


id: FYPO:0000733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long spindle","termid":"FYPO:0000730"},{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000120","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"long mitotic spindle","synonyms":[{"name":"elongated mitotic spindle","type":"exact"},{"name":"increased mitotic spindle length","type":"exact"},{"name":"long bipolar mitotic spindle","type":"exact"},{"name":"long mitotic spindle during vegetative growth","type":"exact"},{"name":"long mitotic spindles","type":"exact"},{"name":"long spindle during mitosis","type":"exact"},{"name":"long spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000733"}


id: PBO:0038753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 3","termid":"PBO:0038753"}


id: SO:0000569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a feature that occurred as the product of a reverse transcriptase mediated event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposed","secondary_identifiers":["SO:0100042","http://en.wikipedia.org/wiki/Retrotransposed"],"termid":"SO:0000569"}


id: PBO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (predicted)","termid":"PBO:0003194"}


id: GO:1905896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cellular response to tunicamycin.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21803450","GOC:aruk","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular response to tunicamycin (obsolete GO:1905896)","synonyms":[{"name":"activation of cellular response to tunicamycin","type":"narrow"},{"name":"up regulation of cellular response to tunicamycin","type":"exact"},{"name":"up-regulation of cellular response to tunicamycin","type":"exact"},{"name":"upregulation of cellular response to tunicamycin","type":"exact"}],"termid":"GO:1905896"}


id: PBO:0027265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027265"}


id: PBO:0074333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1","termid":"PBO:0074333"}


id: MONDO:0008260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kindler syndrome (KS) is the fourth major type of epidermolysis bullosa (EB), besides simplex, junctional and dystrophic forms, and is characterized by skin fragility and blistering at birth followed by development of photosensitivity and progressive poikilodermatous skin changes.","definition_xrefs":["Orphanet:2908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited epidermolysis bullosa","termid":"MONDO:0019276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Kindler syndrome","secondary_identifiers":["NANDO:1200239","MEDGEN:96060","GARD:4391","icd11.foundation:726317303","OMIM:173650","MESH:C536321","SCTID:238836000","UMLS:C0406557","DOID:0060472"],"synonyms":[{"name":"KINDLER syndrome","type":"related"},{"name":"KNDLRS","type":"related"},{"name":"KS","type":"exact"},{"name":"Kindler syndrome","type":"exact"},{"name":"bullous acrokeratotic poikiloderma of Kindler and Weary","type":"related"},{"name":"congenital bullous poikiloderma","type":"related"},{"name":"poikiloderma of Kindler","type":"exact"},{"name":"poikiloderma, congenital, with bullae, Weary type","type":"related"},{"name":"poikiloderma, hereditary acrokeratotic","type":"related"}],"termid":"MONDO:0008260","xrefs":{"Monarch":{"xref_id":"0008260"}}}


id: MONDO:0060564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"HELIX syndrome","secondary_identifiers":["Orphanet:528105","UMLS:C4522164","MEDGEN:1621482","OMIM:617671","GARD:17967"],"synonyms":[{"name":"HELIX","type":"exact"},{"name":"HELIX syndrome","type":"exact"},{"name":"hypohidrosis, electrolyte imbalance, lacrimal gland dysfunction, ichthyosis, and xerostomia","type":"related"},{"name":"hypohidrosis-electrolyte imbalance-lacrimal gland dysfunction-ichthyosis-xerostomia syndrome","type":"exact"}],"termid":"MONDO:0060564","xrefs":{"Monarch":{"xref_id":"0060564"}}}


id: MONDO:0008024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the SLC5A7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 7","termid":"MONDO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 7A","secondary_identifiers":["MEDGEN:322474","UMLS:C1834703","GARD:18269","MESH:C563562","OMIM:158580","DOID:0111201"],"synonyms":[{"name":"Dhmn7A","type":"related"},{"name":"Dhmnvp","type":"related"},{"name":"HMN 7A","type":"related"},{"name":"HMN7A","type":"related"},{"name":"Harper-Young myopathy","type":"related"},{"name":"SLC5A7 neuronopathy, distal hereditary motor","type":"exact"},{"name":"neuronopathy, distal hereditary motor caused by mutation in SLC5A7","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type VIIA","type":"related"},{"name":"neuropathy, distal hereditary motor, type 7A","type":"related"},{"name":"spinal muscular atrophy, distal, with vocal cord paralysis","type":"related"}],"termid":"MONDO:0008024","xrefs":{"Monarch":{"xref_id":"0008024"}}}


id: GO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-4 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-4 receptor binding","synonyms":[{"name":"IL-4","type":"narrow"},{"name":"interleukin-4 receptor ligand","type":"narrow"}],"termid":"GO:0005136"}


id: PBO:0065832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB7B, member RAS oncogene family","termid":"PBO:0065832"}


id: MONDO:0100197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus. There are four serotypes which cause respiratory illnesses in children and adults.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","OMOP:4008269","PMID:27486735","SCTID:12188008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza infectious disease","synonyms":[{"name":"HPIV infectious disorder","type":"exact"},{"name":"human parainfluenza virus infectious disorder","type":"related"},{"name":"human parainfluenza viruses infectious disorder","type":"related"},{"name":"parainfluenza (disorder)","type":"exact"},{"name":"parainfluenza infectious disorder","type":"exact"}],"termid":"MONDO:0100197","xrefs":{"Monarch":{"xref_id":"0100197"}}}


id: PR:O43035
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-like-conjugating enzyme ATG3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12866:SF0","OMA:SCHPO03943","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.06c","secondary_identifiers":["UniProtKB:O43035"],"synonyms":[{"name":"Spom972h-ATG3","type":"exact"},{"name":"autophagy-related E2-like conjugation enzyme atg3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43035"}


id: GO:1905210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["PMID:8760137","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"}


id: MOD:01400
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an L-lysyl-poly(ADP-ribose).","definition_xrefs":["PubMed:6772638","RESID:AA0477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysyl-poly(ADP-ribose)","synonyms":[{"name":"L-lysyl-poly(ADP-ribose)","type":"exact"},{"name":"MOD_RES Lysyl poly(ADP-ribose)","type":"exact"},{"name":"poly[2'-adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with 1alpha-D-ribofuranosyl] (2S)-2,6-diaminohexanoate","type":"exact"}],"termid":"MOD:01400"}


id: PBO:0041339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 33","termid":"PBO:0041339"}


id: PBO:0057209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376c","termid":"PBO:0057209"}


id: GO:0048156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tau protein. tau is a microtubule-associated protein, implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"tau protein binding","termid":"GO:0048156"}


id: GO:0030456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (mating sensu Fungi) (obsolete GO:0030456)","synonyms":[{"name":"activation of MAPK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030456"}


id: GO:0046771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The envelopment of a virus, in which the nucleocapsid evaginates from the host inner nuclear membrane system into the perinuclear space, thus acquiring a membrane envelope.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding from nuclear membrane","termid":"GO:0046765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from inner nuclear membrane","synonyms":[{"name":"inner nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from inner nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from inner nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from inner nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046771"}


id: SO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif to which the S. pombe Zas1 protein binds. The consensus sequence is 5'-(Y)CCCCAY-3'.","definition_xrefs":["PomBase:vw","PMID:29735745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zas1_recognition_motif","synonyms":[{"name":"Zas1 recognition motif","type":"exact"}],"termid":"SO:0002215"}


id: PBO:0030869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_contraction","termid":"PBO:0030869"}


id: GO:0070224
data:
  {"annotated_genes":["SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76603],"is_not":false,"summary":null,"term":"GO:0070224"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2S (hydrogen sulfide) + a quinone = S0 (sulfane sulfur) + a hydroquinone.","definition_xrefs":["RHEA:30239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor","termid":"GO:0016672"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfide:quinone oxidoreductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:R17-RXN","Reactome:R-HSA-1614665"],"synonyms":[{"name":"sulfide-quinone reductase activity","type":"exact"},{"name":"sulphide:quinone oxidoreductase activity","type":"exact"}],"termid":"GO:0070224","terms_by_termid":{"GO:0070224":null}}


id: PBO:0049141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic--pyruvic transaminase 2","termid":"PBO:0049141"}


id: PBO:0064759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPIC antisense RNA 1","termid":"PBO:0064759"}


id: PBO:0028047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_astral_microtubules","termid":"PBO:0028047"}


id: GO:0060228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of phosphatidylcholine-sterol O-acyltransferase.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb","PMID:4335615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"positively_regulates","term_name":"phosphatidylcholine-sterol O-acyltransferase activity","termid":"GO:0004607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"regulates","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"positively_regulates","termid":"GO:0016740"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0016740","GO:0003674","GO:0016746","GO:0030234","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine-sterol O-acyltransferase activator activity","synonyms":[{"name":"LCAT activator activity","type":"narrow"}],"termid":"GO:0060228"}


id: PBO:0080862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 3","termid":"PBO:0080862"}


id: PBO:0071557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 22","termid":"PBO:0071557"}


id: PBO:0077886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p63 regulated 1","termid":"PBO:0077886"}


id: GO:0009938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gibberellic acid mediated signaling activity.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellic acid mediated signaling pathway","termid":"GO:0009937"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"down regulation of gibberellic acid mediated signaling","type":"exact"},{"name":"down-regulation of gibberellic acid mediated signaling","type":"exact"},{"name":"downregulation of gibberellic acid mediated signaling","type":"exact"},{"name":"inhibition of gibberellic acid mediated signaling","type":"narrow"},{"name":"negative regulation of gibberellic acid mediated signalling","type":"exact"}],"termid":"GO:0009938"}


id: PBO:0079396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBB4B pseudogene 3","termid":"PBO:0079396"}


id: PBO:0036334
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human DLP1","termid":"PBO:0036334"}


id: PR:Q8TFH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB17E12.09 gene.","definition_xrefs":["UniProtKB:Q8TFH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein PB17E12.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.09","synonyms":[{"name":"Spom972h-SPAPB17E12.09","type":"exact"}],"termid":"PR:Q8TFH5"}


id: PBO:0029281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0029281"}


id: GO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000473"}


id: GO:0036202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-cassa-12,15-diene + O2 + NADPH + H+ = ent-11beta-hydroxycassa-12,15-diene + NADP+ + H2O.","definition_xrefs":["EC:1.14.14.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ent-cassa-12,15-diene 11-hydroxylase activity","secondary_identifiers":["RHEA:31967","KEGG_REACTION:R09866"],"synonyms":[{"name":"ent-cassadiene C11alpha-hydroxylase activity","type":"related"}],"termid":"GO:0036202"}


id: MONDO:0014310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary fibrosing poikiloderma-tendon contractures-myopathy-pulmonary fibrosis syndrome is a rare, genetic, hereditary poikiloderma syndrome characterized by early-onset poikiloderma (mainly on the face), hypotrichosis, hypohidrosis, muscle and tendon contractures with varus foot deformity, progressive proximal and distal muscle weakness in all extremities, and progressive pulmonary fibrosis. Mild lymphedema of the extremities, growth retardation, liver impairment, exocrine pancreatic insufficiency and hematologic abnormalities are additional variable features.","definition_xrefs":["Orphanet:221043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"hereditary poikiloderma","termid":"MONDO:0016382"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary sclerosing poikiloderma with tendon and pulmonary involvement","secondary_identifiers":["icd11.foundation:1585528459","OMIM:615704","MEDGEN:816655","GARD:13218","UMLS:C3810325"],"synonyms":[{"name":"POIKTMP","type":"related"},{"name":"POIKTMP syndrome","type":"exact"},{"name":"hereditary fibrosing poikiloderma with tendon contractures, myopathy, and pulmonary fibrosis","type":"related"},{"name":"hereditary fibrosing poikiloderma-tendon contractures-myopathy-pulmonary fibrosis syndrome","type":"related"},{"name":"poikiloderma, hereditary fibrosing, with tendon contractures, myopathy, and pulmonary fibrosis","type":"related"},{"name":"poikiloderma, hereditary sclerosing, with tendon and pulmonary involvement","type":"related"}],"termid":"MONDO:0014310","xrefs":{"Monarch":{"xref_id":"0014310"}}}


id: GO:0019038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The name given to a viral genome after it has been integrated into the host genome; particularly applies to retroviruses and is a required part of the retroviral replication cycle.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete provirus (obsolete GO:0019038)","secondary_identifiers":["Wikipedia:Provirus"],"termid":"GO:0019038"}


id: PBO:0053716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 926","termid":"PBO:0053716"}


id: PBO:0042579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 3","termid":"PBO:0042579"}


id: MONDO:0010499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ritscher-Schinzel syndrome in which the cause of the disease is a mutation in the CCDC22 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 2","secondary_identifiers":["OMIM:300963","DOID:0060572","MEDGEN:897005","UMLS:C4225419","GARD:15278"],"synonyms":[{"name":"CCDC22 Ritscher-Schinzel syndrome","type":"exact"},{"name":"RTSC2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2, X-linked recessive","type":"exact"},{"name":"Ritscher-Schinzel syndrome caused by mutation in CCDC22","type":"exact"},{"name":"Ritscher-Schinzel syndrome type 2","type":"exact"}],"termid":"MONDO:0010499","xrefs":{"Monarch":{"xref_id":"0010499"}}}


id: PR:Q9P7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gea1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7R8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C211.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.03c","synonyms":[{"name":"Spom972h-gea1","type":"exact"}],"termid":"PR:Q9P7R8"}


id: MONDO:0004373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary meningioma occurring in adults.","definition_xrefs":["NCIT:C8293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid meningioma","termid":"MONDO:0003262"},{"relation_name":"is_a","term_name":"papillary meningioma","termid":"MONDO:0021088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult papillary meningioma","secondary_identifiers":["MEDGEN:76256","DOID:7826","UMLS:C0281334"],"synonyms":[{"name":"adult papillary meningioma","type":"exact"},{"name":"papillary meningioma","type":"broad"},{"name":"papillary meningioma of adults","type":"exact"}],"termid":"MONDO:0004373","xrefs":{"Monarch":{"xref_id":"0004373"}}}


id: PBO:0083952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of translational elongation factor eEF1B; stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes by releasing eEF1A (Tef1p/Tef2p) from the ribosomal complex","termid":"PBO:0083952"}


id: GO:0008840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-aspartate-4-semialdehyde = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + H2O.","definition_xrefs":["PMID:8993314","RHEA:34171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate synthase activity","secondary_identifiers":["EC:4.3.3.7","KEGG_REACTION:R02292","MetaCyc:DIHYDRODIPICSYN-RXN"],"synonyms":[{"name":"DHDPS activity","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase (adding pyruvate and cyclizing)","type":"related"},{"name":"L-aspartate-4-semialdehyde hydro-lyase [adding pyruvate and cyclizing; (S)-2,3-dihydropyridine-2,6-dicarboxylate-forming]","type":"related"},{"name":"dihydrodipicolinate synthase activity","type":"exact"},{"name":"dihydrodipicolinate synthetase activity","type":"related"},{"name":"dihydrodipicolinic acid synthase activity","type":"related"}],"termid":"GO:0008840"}


id: PBO:0052633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 1","termid":"PBO:0052633"}


id: PBO:0074970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-12","termid":"PBO:0074970"}


id: PBO:0063077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase gamma","termid":"PBO:0063077"}


id: PBO:0074766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 2","termid":"PBO:0074766"}


id: PBO:0060875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export mediator factor","termid":"PBO:0060875"}


id: MONDO:0011697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Waardenburg's syndrome characterized by pigmentary abnormalities of the hair, skin, and eyes, congenital sensorineural hearing loss, and absence of lateral displacement of the inner canthus of each eye that has material basis in variation in the chromosome region 8p23.","definition_xrefs":["PMID:20127975","DOID:0110951","PMID:11810298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2C","secondary_identifiers":["GARD:15396","UMLS:C1847722","MESH:C564684","MEDGEN:335755","OMIM:606662"],"synonyms":[{"name":"WS2C","type":"exact"},{"name":"Waardenburg syndrome type IIC","type":"exact"},{"name":"Waardenburg syndrome, type 2C","type":"related"}],"termid":"MONDO:0011697","xrefs":{"Monarch":{"xref_id":"0011697"}}}


id: PR:Q76PD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1223.01 gene.","definition_xrefs":["UniProtKB:Q76PD2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase hel2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.01","synonyms":[{"name":"Spom972h-SPCC1223.01","type":"exact"},{"name":"histone E3 ligase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q76PD2"}


id: PR:Q9Y7V0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug117 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7V0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 117 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.11c","synonyms":[{"name":"Spom972h-mug117","type":"exact"}],"termid":"PR:Q9Y7V0"}


id: MONDO:0007159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-like hand anomaly-sensorineural deafness syndrome is characterized by an arthrogryposis-like hand anomaly and sensorineural deafness. It has been described in only one family. Male-to-male transmission was observed.","definition_xrefs":["Orphanet:1144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-like hand anomaly-sensorineural deafness syndrome","secondary_identifiers":["DOID:0111609","GARD:784","MESH:C535386","SCTID:720515009","OMIM:108200","MEDGEN:350677","UMLS:C1862471"],"synonyms":[{"name":"DA6","type":"related"},{"name":"arthrogryposis and sensorineural deafness","type":"related"},{"name":"arthrogryposis, distal, type 6","type":"related"},{"name":"arthrogryposis-like hand anomaly and sensorineural deafness","type":"related"},{"name":"distal arthrogryposis type 6","type":"exact"},{"name":"familial hand abnormality and sensori-neural deafness","type":"related"}],"termid":"MONDO:0007159","xrefs":{"Monarch":{"xref_id":"0007159"}}}


id: PBO:0060632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin","termid":"PBO:0060632"}


id: _global:regulates_level_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p regulates levels of c if p regulates some amount (PATO:0000070) of c","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_levels_of","secondary_identifiers":["RO:0002332","GOREL:0000036"],"termid":"_global:regulates_level_of"}


id: SO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified asparagine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_asparagine","secondary_identifiers":["MOD:00903"],"synonyms":[{"name":"ModAsn","type":"exact"},{"name":"modified L asparagine","type":"exact"},{"name":"modified L-asparagine","type":"exact"}],"termid":"SO:0001388"}


id: MONDO:0018957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pudendal neuralgia (PN) is a chronic neuropathic pain, aggravated by sitting and for which no organic cause can be found by imaging studies. It is often associated with pelvic dysfunction.","definition_xrefs":["Orphanet:60039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"},{"relation_name":"is_a","term_name":"neuralgia","termid":"MONDO:0021667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"pudendal neuralgia","secondary_identifiers":["SCTID:427972000","MEDGEN:372681","icd11.foundation:1492963618","UMLS:C1997249","ICD9:729.2","GARD:10713","MESH:D060545"],"synonyms":[{"name":"Alcock syndrome","type":"exact"},{"name":"Pudendalgia","type":"exact"},{"name":"neuralgia of pudendal nerve","type":"exact"},{"name":"pudendal algia","type":"exact"},{"name":"pudendal nerve entrapment syndrome","type":"exact"},{"name":"pudendal nerve neuralgia","type":"exact"},{"name":"pudendal neuralgia by pudendal nerve entrapment","type":"exact"}],"termid":"MONDO:0018957","xrefs":{"Monarch":{"xref_id":"0018957"}}}


id: GO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-3 adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"beta-3 adrenergic receptor binding","synonyms":[{"name":"beta-3 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031699"}


id: MONDO:0008416
data:
  {"annotated_genes":["SJAG_02698","SJAG_01878","SJAG_01938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87083,87084,87085],"is_not":false,"summary":null,"term":"MONDO:0008416"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01878":null,"SJAG_01938":null,"SJAG_02698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-sclerodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0406767","ICD9:757.39","MEDGEN:98360","MESH:C537526","GARD:8517","Orphanet:384","SCTID:239076000","OMIM:181600"],"synonyms":[{"name":"HRZ","type":"related"},{"name":"HURIEZ syndrome","type":"related"},{"name":"Huriez syndrome","type":"exact"},{"name":"SCLEROTYLOSIS","type":"related"},{"name":"Scleroatrophic and keratotic dermatosis of limbs","type":"related"},{"name":"Scleroatrophic syndrome","type":"exact"},{"name":"Sclerotylosis","type":"exact"},{"name":"Tys","type":"related"},{"name":"atrophic fibrosis of the skin of the limbs, hypoplasia of nails, and keratodermia of the palms and soles","type":"related"},{"name":"palmoplantar hyperkeratosis-sclerodactyly syndrome","type":"exact"}],"termid":"MONDO:0008416","terms_by_termid":{"MONDO:0008416":null},"xrefs":{"Monarch":{"xref_id":"0008416"}}}


id: PBO:0086553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL118C is not an essential gene","termid":"PBO:0086553"}


id: MONDO:0700070
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053","SJAG_01491"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86204,86205,86206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[87016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"}]},"cv_name":"mondo","definition":"Any myopathy in which the cause of the disease is a variation in the POMT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan","termid":"MONDO:0016155"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0024322","MONDO:0002320"],"is_obsolete":false,"name":"myopathy caused by variation in POMT1","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"POMT1 myopathy","type":"exact"},{"name":"POMT1-related myopathy","type":"exact"},{"name":"myopathy caused by mutation in POMT1","type":"exact"}],"termid":"MONDO:0700070","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013159":null},"xrefs":{"Monarch":{"xref_id":"0700070"}}}


id: MONDO:1012019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect and atrial fibrillation, non-human animal","termid":"MONDO:1011640"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect and atrial fibrillation, horse","secondary_identifiers":["OMIA:000090-9796"],"termid":"MONDO:1012019","xrefs":{"Monarch":{"xref_id":"1012019"}}}


id: PR:O94298
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sur2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid C4-hydroxylase sur2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.15c","synonyms":[{"name":"Spom972h-sur2","type":"exact"},{"name":"syringomycin response protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94298"}


id: PBO:0059960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 5","termid":"PBO:0059960"}


id: PBO:0085414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein","termid":"PBO:0085414"}


id: MOD:00948
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-dephospho","termid":"MOD:00948"}


id: GO:1990098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing at least one DNA helicase and one primase. Can also contain associated proteins. The helicase component continues to unwind the double-stranded DNA (dsDNA) and the primase component synthesizes a RNA primer during initiation or restart of replication.","definition_xrefs":["PMID:21856207","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"core primosome complex","synonyms":[{"name":"core primosome","type":"exact"}],"termid":"GO:1990098"}


id: GO:0043226
data:
  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