# terms

id: PBO:0090058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2","termid":"PBO:0090058"}


id: FYPO:0001341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to stress during vegetative growth","synonyms":[{"name":"abnormal cellular response to stress during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001341"}


id: MONDO:0008724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of arthrogryposis characterized by congenital cleft palate, microcephaly, craniostenosis and arthrogryposis (limitation of extension of elbows, flexed adducted thumbs, camptodactyly and clubfeet). Additional features include facial dysmorphism (\\\"myopathic\\\" stiff face, antimongoloid slanting, external ophthalmoplegia, telecanthus, low-set large malrotated ears, open mouth, mierogenia and high arched palate). Velopharyngeal insufficiency with difficulties in swallowing, increased secretion of the nose and throat, prominent occiput, generalized muscular hypotonia with mild cyanosis and no spontaneous movements, seizures, torticollis, areflexia, intellectual disability, hypertrichosis of the lower extremities, and scleredema (in the first days of life) are also observed. The disease often leads to early death. Transmission is autosomal recessive. No new cases of adducted thumbs-arthrogryposis, Christian type have been described since 1983.","definition_xrefs":["Orphanet:2952"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducted thumbs-arthrogryposis syndrome, Christian type","secondary_identifiers":["UMLS:C4304055","OMIM:201550","GARD:10277","MEDGEN:929724"],"synonyms":[{"name":"adducted thumbs syndrome","type":"related"}],"termid":"MONDO:0008724","xrefs":{"Monarch":{"xref_id":"0008724"}}}


id: MONDO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the orbit.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull cancer","termid":"MONDO:0002132"},{"relation_name":"is_a","term_name":"orbit neoplasm","termid":"MONDO:0024611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"orbital cancer","secondary_identifiers":["DOID:4143","EFO:0007408","NCIT:C3290","ICD9:239.89","SCTID:127003006","NCIT:C3562","ICD9:190.1","MEDGEN:56314","UMLS:C0153626"],"synonyms":[{"name":"cancer of orbit of skull","type":"exact"},{"name":"malignant neoplasm of orbit","type":"exact"},{"name":"malignant neoplasm of orbit of skull","type":"exact"},{"name":"malignant neoplasm of the orbit","type":"exact"},{"name":"malignant orbit neoplasm","type":"exact"},{"name":"malignant orbit of skull neoplasm","type":"exact"},{"name":"malignant orbit tumor","type":"exact"},{"name":"malignant orbit tumour","type":"exact"},{"name":"malignant orbital neoplasm","type":"exact"},{"name":"malignant orbital tumor","type":"exact"},{"name":"malignant orbital tumour","type":"exact"},{"name":"malignant tumor of orbit","type":"exact"},{"name":"malignant tumor of the orbit","type":"exact"},{"name":"malignant tumour of orbit","type":"exact"},{"name":"malignant tumour of the orbit","type":"exact"},{"name":"neoplasm of orbit proper","type":"broad"},{"name":"orbit cancer","type":"exact"},{"name":"orbit of skull cancer","type":"exact"},{"name":"orbital tumor","type":"broad"},{"name":"orbital tumour","type":"broad"}],"termid":"MONDO:0002889","xrefs":{"Monarch":{"xref_id":"0002889"}}}


id: GO:0097329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimetabolite stimulus. An antimetabolite is a substance which is structurally similar to a metabolite but which competes with it or replaces it, and so prevents or reduces its normal utilization.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antimetabolite","termid":"GO:0097329"}


id: PBO:0043540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 8","termid":"PBO:0043540"}


id: MOD:01970
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl glutamic acid, forming an isopeptide bond with a free glutamic acid.","definition_xrefs":["PubMed:23434852","PubMed:10747868","PubMed:15525938","RESID:AA0612","Unimod:450","PubMed:1680872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl glutamic acid","synonyms":[{"name":"(2S)-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanedioic acid","type":"exact"},{"name":"(2S)-2-[(4S)-4-amino-4-carboxybutanamido]pentanedioic acid","type":"exact"},{"name":"2-([4-azanyl-4-carboxybutanoyl]azanyl)pentanedioic acid","type":"exact"},{"name":"5-glutamyl glutamic acid","type":"exact"},{"name":"Glu","type":"related"},{"name":"MOD_RES 5-glutamyl glutamate","type":"exact"},{"name":"N alpha -(gamma-Glutamyl)-Glu","type":"exact"},{"name":"N-(gamma-L-glutamyl)-L-glutamic acid","type":"exact"},{"name":"gamma-glutamylglutamate","type":"exact"},{"name":"isoglutamyl glutamic acid","type":"exact"},{"name":"isoglutamyl monoglutamic acid","type":"exact"},{"name":"monoglutamyl","type":"related"}],"termid":"MOD:01970"}


id: GO:2000998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of cellulose catabolic process","termid":"GO:2000997"},{"relation_name":"negatively_regulates","term_name":"cellulose catabolic process","termid":"GO:0030245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of cellulose catabolic process","synonyms":[{"name":"negative regulation of cellulose breakdown","type":"exact"},{"name":"negative regulation of cellulose catabolism","type":"exact"},{"name":"negative regulation of cellulose degradation","type":"exact"}],"termid":"GO:2000998"}


id: GO:0047750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol.","definition_xrefs":["RHEA:15281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"cholestenol delta-isomerase activity","secondary_identifiers":["MetaCyc:RXN66-25","EC:5.3.3.5"],"synonyms":[{"name":"cholestenol D-isomerase activity","type":"exact"},{"name":"delta7-cholestenol delta7-delta8-isomerase activity","type":"related"}],"termid":"GO:0047750"}


id: GO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently with ALP, actinin-associated LIM protein of the Z band. ALP is a PDZ/LIM domain protein found in the Z band.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ALP binding (obsolete GO:0051411)","synonyms":[{"name":"ALP binding","type":"exact"},{"name":"actinin-associated LIM protein binding","type":"exact"}],"termid":"GO:0051411"}


id: MONDO:0016982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the endothelial cells of the blood vessels. Microscopically, it is characterized by frequently open vascular anastomosing and branching channels. The malignant cells that line the vascular channels are spindle or epithelioid and often display hyperchromatic nuclei. Angiosarcomas most frequently occur in the skin and breast. Patients with long-standing lymphedema are at increased risk of developing angiosarcoma.","definition_xrefs":["NCIT:C3088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"angiosarcoma","secondary_identifiers":["ICDO:9120/3","EFO:0003968","MEDGEN:42385","DOID:0001816","Orphanet:263413","ICD9:171.9","GARD:20900","ONCOTREE:ANGS","HP:0200058","MESH:D006394","MedDRA:10002476","SCTID:403977003","UMLS:C0018923"],"synonyms":[{"name":"angiosarcoma","type":"exact"},{"name":"angiosarcoma (disease)","type":"exact"},{"name":"blood vessel sarcoma","type":"exact"},{"name":"hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma, malignant","type":"exact"},{"name":"malignant angioendothelioma","type":"exact"},{"name":"malignant hemangioendothelioma","type":"exact"},{"name":"sarcoma of blood vessel","type":"exact"},{"name":"vascular sarcoma","type":"exact"}],"termid":"MONDO:0016982","xrefs":{"Monarch":{"xref_id":"0016982"}}}


id: PBO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase Aca1","termid":"PBO:0012565"}


id: GO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090101"}


id: PBO:0051725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INSYN1 antisense RNA 1","termid":"PBO:0051725"}


id: MOD:00075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N,N-dimethyl-L-proline.","definition_xrefs":["Unimod:529","ChEBI:21451","PubMed:3882426","PubMed:12964758","PubMed:14570711","PubMed:6254758","RESID:AA0066","PubMed:193025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protonated-dimethylated residue","termid":"MOD:00710"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-proline","synonyms":[{"name":"(2S)-2-carboxy-1,1-dimethylpyrrolidinium","type":"exact"},{"name":"1,1-dimethyl-L-prolinium","type":"exact"},{"name":"Delta:H(5)C(2)","type":"related"},{"name":"Dimethyl","type":"related"},{"name":"Dimethylation of proline residue","type":"related"},{"name":"MOD_RES N,N-dimethylproline","type":"exact"},{"name":"N,N-dimethyl-L-proline","type":"exact"},{"name":"N,N-dimethyl-L-prolinium","type":"exact"},{"name":"N,N-dimethylated L-proline","type":"exact"},{"name":"NMe2Pro","type":"exact"},{"name":"stachydrin","type":"exact"}],"termid":"MOD:00075"}


id: PBO:0087652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; complex binds specifically to cytosolic chaperonin and transfers target proteins to it","termid":"PBO:0087652"}


id: PR:Q92337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ybt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter abc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.12c","synonyms":[{"name":"Spom972h-ybt1","type":"exact"}],"termid":"PR:Q92337"}


id: PBO:0079288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 7","termid":"PBO:0079288"}


id: PBO:0085931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data","termid":"PBO:0085931"}


id: PBO:0085626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in excretion of putrescine and spermidine; putative polyamine transporter in the Golgi or post-Golgi vesicles","termid":"PBO:0085626"}


id: PBO:0057068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 149","termid":"PBO:0057068"}


id: MONDO:0100586
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012282"},{"annotations":[86383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014139"},{"annotations":[87090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010075"}]},"cv_name":"mondo","definition":"Any congenital disorder of glycosylation in which the cause of the disease is a mutation in B3GALT6.","definition_xrefs":["PMID:30740740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"B3GALT6-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"B3GALT6-CDG","type":"exact"},{"name":"B3GALT6-congenital disorder of glycosylation","type":"exact"},{"name":"B3GALT6-related congenital disorder of glycosylation","type":"exact"}],"termid":"MONDO:0100586","terms_by_termid":{"MONDO:0010075":null,"MONDO:0012282":null,"MONDO:0014139":null},"xrefs":{"Monarch":{"xref_id":"0100586"}}}


id: PBO:0062136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 3","termid":"PBO:0062136"}


id: MONDO:0022822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cardiovascular shunt","secondary_identifiers":["UMLS:C0596366","MEDGEN:108904"],"termid":"MONDO:0022822","xrefs":{"Monarch":{"xref_id":"0022822"}}}


id: MONDO:0006675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign monoclonal gammopathy (obsolete MONDO:0006675)","termid":"MONDO:0006675","xrefs":{"Monarch":{"xref_id":"0006675"}}}


id: FYPO:0007407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more RNAs that are normally expressed during phosphate starvation measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PMID:32499400","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of phosphate starvation gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to phosphate starvation gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of phosphate starvation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of phosphate starvation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of phosphate starvation gene transcripts during vegetative growth","type":"exact"},{"name":"increased phosphate starvation gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0007407"}


id: GO:0019441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan into other compounds, including kynurenine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"kynurenine metabolic process","termid":"GO:0070189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-tryptophan catabolic process to kynurenine","secondary_identifiers":["MetaCyc:TRPKYNCAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to kynurenine","type":"exact"},{"name":"tryptophan catabolic process to kynurenine","type":"exact"},{"name":"tryptophan degradation to kynurenine","type":"exact"}],"termid":"GO:0019441"}


id: GO:0016945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase III following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription elongation factor activity (obsolete GO:0016945)","synonyms":[{"name":"Pol III transcription elongation factor activity","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"exact"}],"termid":"GO:0016945"}


id: GO:1900321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltotetraose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"maltotetraose transport","termid":"GO:2001099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of maltotetraose transport","termid":"GO:1900321"}


id: PR:O74418
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC162.01c gene.","definition_xrefs":["UniProtKB:O74418","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6.U5 tri-snRNP-associated protein 3-like protein C162.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.01c","synonyms":[{"name":"Spom972h-SPCC162.01c","type":"exact"}],"termid":"PR:O74418"}


id: PBO:0069733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1014, pseudogene","termid":"PBO:0069733"}


id: GO:0061212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the juxtaglomerular apparatus in the mesonephros over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"},{"relation_name":"part_of","term_name":"mesonephros development","termid":"GO:0001823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}


id: SO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 5th residue (a lysine), from the start of the H2B protein is methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK5_monomethylation_site","synonyms":[{"name":"H2BK5 mono-methylation site","type":"exact"}],"termid":"SO:0001714"}


id: GO:0098037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 5' protruding ends.","definition_xrefs":["GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA genome packaging via site-specific sequence recognition","termid":"GO:0098035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral DNA genome packaging, 5' extended cos packaging","termid":"GO:0098037"}


id: GO:0006641
data:
  {"annotated_genes":["SJAG_02907","SJAG_02763","SJAG_04041","SJAG_02683","SJAG_03604","SJAG_03609","SJAG_02089","SJAG_03162","SJAG_02543","SJAG_01036","SJAG_02487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71626,74908,77325,90375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[92233,117884,71875,98793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[92234,94016,115094,90454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triglyceride, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triglycerides are important components of plant oils, animal fats and animal plasma lipoproteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8979227"],"synonyms":[{"name":"triacylglycerol metabolic process","type":"exact"},{"name":"triacylglycerol metabolism","type":"exact"},{"name":"triglyceride metabolism","type":"exact"}],"termid":"GO:0006641","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null}}


id: GO:0097554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the left anterior basal body, extends laterally through the cytoplasm, crosses the right anterior axoneme, and exits as a membrane-bound flagellum on the anterior left side of the cell.","definition_xrefs":["PMID:5961344","GOC:giardia","ISBN:9780124260207","PMID:16607022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left anterior flagellum","synonyms":[{"name":"left anterior cilium","type":"exact"}],"termid":"GO:0097554"}


id: PR:Q10061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog lhs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.06","synonyms":[{"name":"Spom972h-lsh1","type":"exact"}],"termid":"PR:Q10061"}


id: GO:0010684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tricyclic triterpenoid compounds, terpenoids with six isoprene units and 3 rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"},{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tricyclic triterpenoid catabolic process","synonyms":[{"name":"tricyclic triterpenoid catabolism","type":"exact"}],"termid":"GO:0010684"}


id: MONDO:0014570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ADCY6 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 8","secondary_identifiers":["MEDGEN:896058","GARD:18565","UMLS:C4225385","OMIM:616287"],"synonyms":[{"name":"ADCY6 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS8","type":"related"},{"name":"lethal congenital contracture syndrome 8","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ADCY6","type":"exact"},{"name":"lethal congenital contracture syndrome type 8","type":"exact"}],"termid":"MONDO:0014570","xrefs":{"Monarch":{"xref_id":"0014570"}}}


id: GO:0006018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate catabolic process","synonyms":[{"name":"2-deoxyribose 1-phosphate breakdown","type":"exact"},{"name":"2-deoxyribose 1-phosphate catabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate degradation","type":"exact"},{"name":"deoxyribose 1-phosphate catabolic process","type":"exact"}],"termid":"GO:0006018"}


id: FYPO:0000373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of RNA modification is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of RNA modification","synonyms":[{"name":"RNA modification: decreased rate","type":"related"},{"name":"decreased rate of RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased rate of RNA modification during vegetative growth","type":"exact"},{"name":"reduced rate of RNA modification","type":"exact"}],"termid":"FYPO:0000373"}


id: PBO:0036311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3b (predicted)","termid":"PBO:0036311"}


id: PATO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being convex on both sides or surface.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/biconvexity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex","termid":"PATO:0001355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biconvex","secondary_identifiers":["Image:http\\://www.thefreedictionary.com/_/viewer.aspx?path=hm&name=A4bicovx"],"termid":"PATO:0002040"}


id: PBO:0052305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0087 lncRNA","termid":"PBO:0052305"}


id: FYPO:0006783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more carbohydrate metabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Carbohydrate metabolism RNAs are transcribed from genes whose products are involved in metabolism of one or more carbohydrates.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of carbohydrate metabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased carbohydrate metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of carbohydrate metabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of carbohydrate metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of carbohydrate metabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006783"}


id: MONDO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade carcinoma of the kidney. It is not a distinct clinicopathological entity and includes a diverse group of renal cell carcinomas which have been transformed from a lower to a higher grade.","definition_xrefs":["NCIT:C27893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"sarcomatoid renal cell carcinoma","secondary_identifiers":["MEDGEN:220411","ONCOTREE:SRCC","ICDO:8318/3","DOID:4473","UMLS:C1266043"],"synonyms":[{"name":"RCC w/ sarcomatoid features","type":"exact"},{"name":"SRCC","type":"related"},{"name":"renal cell carcinoma with sarcomatoid features","type":"exact"},{"name":"renal cell carcinoma, spindle cell","type":"exact"},{"name":"sarcomatoid renal cell cancer","type":"exact"},{"name":"sarcomatoid renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003012","xrefs":{"Monarch":{"xref_id":"0003012"}}}


id: SO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Terminal inverted repeat transposons in the PIF/Harbinger/tourist superfamily create 3-bp target site duplication that are mainly 'TAA' or 'TTA'. The autonomous PIF-Harbinger elements are relatively small in size, usually a few kb in length. Non-autonomous elements in this superfamily usually shorter than 600 bp are referrred to as Tourist elements. The terminal sequences for PIF/Harbinger/Tourist elements are 'GGG/CCC…GGC/GCC' or 'GA/GGCA…TGCC/TC'.","definition_xrefs":["PMID:26709091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIF_Harbinger_TIR_transposon","synonyms":[{"name":"DTH transposon","type":"exact"},{"name":"Harbinger transposon","type":"exact"},{"name":"PIF Harbinger TIR transposon","type":"exact"},{"name":"PIF transposon","type":"exact"},{"name":"Tourist transposon element","type":"exact"}],"termid":"SO:0002284"}


id: MOD:01637
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-glutamine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine removal","termid":"MOD:01637"}


id: PBO:0117187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DRAM1 antisense RNA 1","termid":"PBO:0117187"}


id: PBO:0116408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 4","termid":"PBO:0116408"}


id: MONDO:0006940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral nerve lesion that involves the radial nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial neuropathy","termid":"MONDO:0001459"},{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"brachial plexus neuritis","termid":"MONDO:0006682"},{"relation_name":"is_a","term_name":"peripheral nerve lesion","termid":"MONDO:0024334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial nerve lesion","secondary_identifiers":["SCTID:193137006","MedDRA:10061477","MEDGEN:102317","UMLS:C0154744","ICD9:354.3","DOID:12170","EFO:1001143"],"synonyms":[{"name":"lesion of radial nerve","type":"exact"},{"name":"peripheral nerve lesion of radial nerve","type":"exact"},{"name":"radial nerve lesions","type":"exact"},{"name":"radial nerve peripheral nerve lesion","type":"exact"}],"termid":"MONDO:0006940","xrefs":{"Monarch":{"xref_id":"0006940"}}}


id: GO:1901490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphangiogenesis.","definition_xrefs":["GOC:TermGenie","PMID:20133819","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphangiogenesis","synonyms":[{"name":"regulation of lymph vessel formation","type":"exact"}],"termid":"GO:1901490"}


id: PBO:0043266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 25","termid":"PBO:0043266"}


id: PBO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 12","termid":"PBO:0052644"}


id: PBO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 28","termid":"PBO:0060040"}


id: GO:0070069
data:
  {"annotated_genes":["SJAG_00755","SJAG_03490","SJAG_00976","SJAG_00601","SJAG_MIT20","SJAG_05629","SJAG_MIT13","SJAG_01355","SJAG_03337","SJAG_00080","SJAG_07006","SJAG_02504","SJAG_01190","SJAG_01763","SJAG_01490","SJAG_MIT04","SJAG_01077","SJAG_02646","SJAG_07007","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72448,74065,104393,119353,113707,76033,76187,61896,117982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045275"},{"annotations":[114958,115758,74649,68199,119326,119376,119348,72376,89563,114529,108597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045277"}]},"cv_name":"cellular_component","definition":"A protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_03337":null,"SJAG_03490":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytochrome complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070069","terms_by_termid":{"GO:0045275":null,"GO:0045277":null}}


id: MONDO:0011210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein Tim12, yeast, homolog of","secondary_identifiers":["MEDGEN:400824","OMIM:602252","UMLS:C1865698"],"synonyms":[{"name":"mitochondrial intermembrane space protein Tim12, yeast, homolog of","type":"exact"}],"termid":"MONDO:0011210","xrefs":{"Monarch":{"xref_id":"0011210"}}}


id: GO:0160031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endoplasmic reticulum membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["PMID:24373967","PMID:34617598","PMID:19825355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum membrane biogenesis","synonyms":[{"name":"ER membrane biogenesis","type":"exact"}],"termid":"GO:0160031"}


id: PBO:0034433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_vegetative_growth","termid":"PBO:0034433"}


id: PBO:0029001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_at_dh_repeat","termid":"PBO:0029001"}


id: GO:1903062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["PMID:23931754","GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of reverse cholesterol transport","termid":"GO:1903062"}


id: MOD:01863
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with one of the Applied Biosystems mTRAQ reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged reagent acylated residue","termid":"MOD:01705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"}],"termid":"MOD:01863"}


id: GO:0019512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate tagatose-6-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose catabolic process","termid":"GO:0005990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose catabolic process via tagatose-6-phosphate","secondary_identifiers":["MetaCyc:LACTOSECAT-PWY"],"synonyms":[{"name":"lactose breakdown via tagatose-6-phosphate","type":"exact"},{"name":"lactose degradation via tagatose-6-phosphate","type":"exact"}],"termid":"GO:0019512"}


id: MONDO:0033622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 44","secondary_identifiers":["DOID:0112109","MEDGEN:1750188","UMLS:C5436678","OMIM:619044"],"synonyms":[{"name":"SPGF44","type":"exact"}],"termid":"MONDO:0033622","xrefs":{"Monarch":{"xref_id":"0033622"}}}


id: PBO:0091805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ClC chloride channel","termid":"PBO:0091805"}


id: PBO:0056792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFF pseudogene 1","termid":"PBO:0056792"}


id: PBO:0031642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_shmoo_formation","termid":"PBO:0031642"}


id: MONDO:0013250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 17p12-q11.2.","definition_xrefs":["DOID:0110531","PMID:19888295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 85","secondary_identifiers":["MEDGEN:463629","UMLS:C3160740","GARD:22635","OMIM:613392"],"synonyms":[{"name":"DFNB85","type":"narrow"},{"name":"autosomal recessive deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 85","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 85","type":"narrow"},{"name":"deafness, autosomal recessive 85","type":"narrow"}],"termid":"MONDO:0013250","xrefs":{"Monarch":{"xref_id":"0013250"}}}


id: PBO:0078842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 4-1","termid":"PBO:0078842"}


id: GO:0071917
data:
  {"annotated_genes":["SJAG_04406","SJAG_01960","SJAG_00276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93455,93688,112568],"is_not":false,"summary":null,"term":"GO:0071917"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a triose phosphate from one side of a membrane to the other.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null,"SJAG_04406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"triose-phosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071917","terms_by_termid":{"GO:0071917":null}}


id: GO:0008389
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coumarin + O2 + NADPH + H+ = hydroxycoumarin + H2O + NADP+.","definition_xrefs":["PMID:2733794","PMID:10490589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"coumarin 7-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-211881","Reactome:R-HSA-76453"],"synonyms":[{"name":"cytochrome P450 CYP2A5","type":"narrow"}],"termid":"GO:0008389"}


id: FYPO:0004613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the spindle pole body is not attached to any interphase cytoplasmic microtubules; as a result, the microtubules are not connected to the nucleus. Normally, the spindle pole body is attached to at least one cytoplasmic microtubule bundle.","definition_xrefs":["PomBase:mah","PMID:15772152","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished microtubule attachment to spindle pole body","synonyms":[{"name":"SPB detached from cytoplasmic microtubules","type":"exact"},{"name":"abolished microtubule attachment to nucleus","type":"broad"},{"name":"abolished microtubule attachment to spindle pole body during mitotic cell cycle","type":"related"},{"name":"abolished microtubule attachment to spindle pole body during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules absent from mitotic spindle pole body","type":"exact"},{"name":"cytoplasmic microtubules detached from spindle pole body","type":"exact"},{"name":"interphase microtubules detached from nucleus","type":"exact"},{"name":"interphase microtubules detached from spindle pole body","type":"exact"},{"name":"spindle pole body detached from cytoplasmic microtubules","type":"exact"}],"termid":"FYPO:0004613"}


id: MONDO:0003941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"classic variant of chromophobe renal cell carcinoma","secondary_identifiers":["DOID:6605","MEDGEN:232080","UMLS:C1333062","NCIT:C27888"],"synonyms":[{"name":"classic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003941","xrefs":{"Monarch":{"xref_id":"0003941"}}}


id: PATO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality that arises by virtue of whether the bearer's disposition to differentiate into one or more mature cell types.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular potency","termid":"PATO:0001397"}


id: GO:1903786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of glutathione biosynthetic process","synonyms":[{"name":"regulation of glutathione anabolism","type":"exact"},{"name":"regulation of glutathione biosynthesis","type":"exact"},{"name":"regulation of glutathione formation","type":"exact"},{"name":"regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903786"}


id: PBO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family","termid":"PBO:0000619"}


id: PBO:0063719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I","termid":"PBO:0063719"}


id: MONDO:0016492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Beta-thalassemias with other manifestations are a group of beta-thalassemias associated with another disorder.","definition_xrefs":["Orphanet:231386"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-thalassemia with other manifestations (obsolete MONDO:0016492)","termid":"MONDO:0016492","xrefs":{"Monarch":{"xref_id":"0016492"}}}


id: PBO:0077023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 5","termid":"PBO:0077023"}


id: PBO:0091529
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RHO1","termid":"PBO:0091529"}


id: PBO:0061371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 31","termid":"PBO:0061371"}


id: GO:1990506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA replication process that uses parental DNA as a template for the DNA-dependent DNA polymerases that synthesize the new strands during the mitotic cell cycle.","definition_xrefs":["PMID:16120966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA-templated DNA replication","synonyms":[{"name":"mitotic DNA-dependent DNA replication","type":"exact"}],"termid":"GO:1990506"}


id: PBO:0058255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4633","termid":"PBO:0058255"}


id: MONDO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vein.","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vein disorder","secondary_identifiers":["ICD9:453","MEDGEN:115992","DOID:866","UMLS:C0235522","NCIT:C35279","SCTID:90507008"],"synonyms":[{"name":"disease of vein","type":"exact"},{"name":"disease or disorder of vein","type":"exact"},{"name":"disorder of vein","type":"exact"},{"name":"vein disease","type":"exact"},{"name":"vein disease or disorder","type":"exact"}],"termid":"MONDO:0004634","xrefs":{"Monarch":{"xref_id":"0004634"}}}


id: MONDO:0010974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the NPHS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 2","secondary_identifiers":["DOID:0080379","GARD:15326","MEDGEN:358380","OMIM:600995","UMLS:C1868672"],"synonyms":[{"name":"NPHS2","type":"related"},{"name":"NPHS2 nephrotic syndrome","type":"exact"},{"name":"SRN1","type":"related"},{"name":"nephrotic syndrome caused by mutation in NPHS2","type":"exact"},{"name":"nephrotic syndrome, idiopathic, steroid-resistant","type":"related"},{"name":"nephrotic syndrome, steroid-resistant, autosomal recessive","type":"related"},{"name":"nephrotic syndrome, type 2","type":"exact"}],"termid":"MONDO:0010974","xrefs":{"Monarch":{"xref_id":"0010974"}}}


id: GO:0002758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an innate immune response.","definition_xrefs":["PMID:11418339","PMID:28105028","GOC:mah","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune response-activating signaling pathway","termid":"GO:0002757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"innate immune response-activating signaling pathway","secondary_identifiers":["GO:0010204","GO:0009870"],"synonyms":[{"name":"defence response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signaling pathway, resistance gene-independent","type":"related"},{"name":"defence response signalling pathway, resistance gene-dependent","type":"related"},{"name":"defence response signalling pathway, resistance gene-independent","type":"related"},{"name":"defense response signaling pathway, resistance gene-dependent","type":"related"},{"name":"defense response signaling pathway, resistance gene-independent","type":"related"},{"name":"defense response signalling pathway, resistance gene-dependent","type":"related"},{"name":"effector triggered immunity","type":"broad"},{"name":"effector-triggered immune signaling","type":"related"},{"name":"effector-triggered immunity","type":"broad"}],"termid":"GO:0002758"}


id: GO:0071365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an auxin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to auxin","termid":"GO:0009733"},{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to auxin stimulus","termid":"GO:0071365"}


id: GO:0008355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in an organism in which a relatively long-lasting adaptive behavioral change occurs in response to (repeated) exposure to an olfactory cue.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"associative learning","termid":"GO:0008306"},{"relation_name":"is_a","term_name":"olfactory behavior","termid":"GO:0042048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory learning","termid":"GO:0008355"}


id: PBO:0073104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress responsive DNAJB4 interacting membrane protein 1","termid":"PBO:0073104"}


id: PBO:0003400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducer of sexual development Sds23/Moc1","termid":"PBO:0003400"}


id: MONDO:0009227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myofibromatosis in which the cause of the disease is a mutation in the PDGFRB gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile myofibromatosis","termid":"MONDO:0016824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myofibromatosis, infantile, 1","secondary_identifiers":["NCIT:C176943","SCTID:254146000","MEDGEN:1632352","MESH:C562978","UMLS:C4551572","ICD9:756.9","OMIM:228550"],"synonyms":[{"name":"IMF1","type":"related"},{"name":"PDGFRB myofibromatosis","type":"exact"},{"name":"fibromatosis, congenital generalised","type":"related"},{"name":"fibromatosis, congenital generalized","type":"related"},{"name":"myofibromatosis caused by mutation in PDGFRB","type":"exact"},{"name":"myofibromatosis, infantile, 1","type":"exact"},{"name":"myofibromatosis, infantile, type 1","type":"exact"},{"name":"myofibromatosis, juvenile","type":"related"}],"termid":"MONDO:0009227","xrefs":{"Monarch":{"xref_id":"0009227"}}}


id: GO:0102708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methyl-beta-alanine + S-adenosyl-L-methionine = H+ + N,N-dimethyl-beta-alanine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosyl-L-methionine:N-methyl-beta-alanine N-methyltransferase activity (obsolete GO:0102708)","termid":"GO:0102708"}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: PBO:0049057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 62","termid":"PBO:0049057"}


id: MONDO:0017345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-related tumor","termid":"MONDO:0017342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-associated mesenchymal tumor","secondary_identifiers":["UMLS:C5679941","MEDGEN:1843096","Orphanet:289656","GARD:21149"],"synonyms":[{"name":"EBV-associated mesenchymal tumor","type":"exact"},{"name":"EBV-associated mesenchymal tumour","type":"exact"}],"termid":"MONDO:0017345","xrefs":{"Monarch":{"xref_id":"0017345"}}}


id: MONDO:0014552
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85778],"is_not":false,"summary":null,"term":"MONDO:0014552"}]},"cv_name":"mondo","definition":"Lethal fetal cerebrorenogenitourinary agenesis/hypoplasia syndrome is a rare, genetic developmental defect during embryogenesis malformation syndrome characterized by intrauterine growth restriction, flexion arthrogryposis of all joints, severe microcephaly, renal cystic dysplasia/agenesis/hypoplasia and complex malformations of the brain (cerebral and cerebellar hypoplasia, vermis, corpus callosum and/or occipital lobe agenesis, with or without arhinencephaly), as well as of the genitourinary tract (ureteral agenesis/hypoplasia, uterine hypoplasia and/or vaginal atresia), leading to fetal demise.","definition_xrefs":["Orphanet:439897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"},{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"lethal fetal cerebrorenogenitourinary agenesis/hypoplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17743","UMLS:C4015701","MEDGEN:864138","OMIM:616258"],"synonyms":[{"name":"MKS12","type":"related"},{"name":"Meckel syndrome 12","type":"related"},{"name":"Meckel syndrome type 12","type":"exact"}],"termid":"MONDO:0014552","terms_by_termid":{"MONDO:0014552":null},"xrefs":{"Monarch":{"xref_id":"0014552"}}}


id: GO:0044225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of a neuron cell soma closest to the point where the apical dendrite emerges.","definition_xrefs":["NIF_Subcellular:sao1186862860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell pole","termid":"GO:0060187"},{"relation_name":"part_of","term_name":"neuronal cell body","termid":"GO:0043025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical pole of neuron","termid":"GO:0044225"}


id: PBO:0073828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 5 pseudogene 2","termid":"PBO:0073828"}


id: MOD:01426
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms an adduct with a particular isotope labeled compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}


id: MONDO:0100290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of multiple serrated polyps in the colon. The polyps are predominantly sessile serrated adenomas/polyps. A minority of the polyps are microvesicular variants of hyperplastic polyps. According to some authors, the polyps are proximal to the sigmoid colon. According to others, the polyps are distributed throughout the entire colon.","definition_xrefs":["NCIT:C96470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplastic polyposis syndrome","termid":"MONDO:0015524"},{"relation_name":"is_a","term_name":"polyp of colon","termid":"MONDO:0021400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon serrated polyposis","secondary_identifiers":["MEDGEN:474430","UMLS:C3272797"],"termid":"MONDO:0100290","xrefs":{"Monarch":{"xref_id":"0100290"}}}


id: MONDO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prenatal onset growth disorder with multiorgan manifestations.","definition_xrefs":["Orphanet:2576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"disorder of defective peroxisome oxidative status","termid":"MONDO:0100306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"mulibrey nanism","secondary_identifiers":["MEDGEN:99347","NCIT:C84906","NORD:1465","ICD9:759.89","SCTID:81604003","MESH:D050336","OMIM:253250","UMLS:C0524582","DOID:0050436","GARD:95","icd11.foundation:1167260635"],"synonyms":[{"name":"MUL","type":"exact"},{"name":"Perheentupa syndrome","type":"exact"},{"name":"mulibrey dwarfism","type":"exact"},{"name":"mulibrey nanism","type":"exact"},{"name":"muscle-liver-brain-eye nanism","type":"exact"},{"name":"pericardial constriction and Growth failure","type":"related"},{"name":"pericardial constriction and growth failure","type":"exact"},{"name":"pericardial constriction-growth failure syndrome","type":"exact"}],"termid":"MONDO:0009664","xrefs":{"Monarch":{"xref_id":"0009664"}}}


id: MONDO:0006093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the ascending colon. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C6427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon neuroendocrine tumor G1","termid":"MONDO:0006155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"ascending colon neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:231386","UMLS:C1332340"],"synonyms":[{"name":"ascending colon NET G1","type":"exact"},{"name":"ascending colon carcinoid tumor","type":"exact"},{"name":"ascending colon carcinoid tumor (disease)","type":"exact"},{"name":"ascending colon carcinoid tumour","type":"exact"},{"name":"ascending colon carcinoid tumour (disease)","type":"exact"},{"name":"ascending colon neuroendocrine neoplasm G1","type":"exact"},{"name":"ascending colon neuroendocrine tumor G1","type":"exact"},{"name":"ascending colon neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"carcinoid tumor of ascending colon","type":"exact"},{"name":"carcinoid tumor of the ascending colon","type":"exact"},{"name":"carcinoid tumour of ascending colon","type":"exact"},{"name":"carcinoid tumour of the ascending colon","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of ascending colon","type":"exact"}],"termid":"MONDO:0006093","xrefs":{"Monarch":{"xref_id":"0006093"}}}


id: GO:0033376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"part_of","term_name":"protein localization to T cell secretory granule","termid":"GO:0033374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to T cell secretory granule","synonyms":[{"name":"establishment of protein localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protein localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033376"}


id: FYPO:0001373
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119601,119602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[119573,119572,119580,119584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal protein localization to medial cortex","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","pom1delta"],"synonyms":[{"name":"abnormal protein localisation to medial cortex","type":"exact"},{"name":"abnormal protein localization to medial ring","type":"exact"}],"termid":"FYPO:0001373","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: MONDO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cleft larynx, posterior","secondary_identifiers":["MEDGEN:349091","OMIM:215800","GARD:4015","Orphanet:2005","UMLS:C1859083"],"synonyms":[{"name":"Novak syndrome","type":"related"},{"name":"cleft larynx, posterior","type":"exact"},{"name":"laryngotracheoesophageal cleft pulmonary hypoplasia","type":"related"},{"name":"stridor, congenital","type":"related"}],"termid":"MONDO:0008990","xrefs":{"Monarch":{"xref_id":"0008990"}}}


id: FYPO:0006097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cables is increased.","definition_xrefs":["PomBase:mah","PMID:20705471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cable","termid":"FYPO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to actin cable","synonyms":[{"name":"increased protein localisation to actin cable during vegetative growth","type":"exact"},{"name":"increased protein localization to actin cable during mitotic cell cycle","type":"related"},{"name":"increased protein localization to actin cable during vegetative growth","type":"exact"},{"name":"increased protein localization to formin-nucleated actin cable","type":"exact"}],"termid":"FYPO:0006097"}


id: PBO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated protein serine/threonine kinase alpha subunit Ssp2","termid":"PBO:0018196"}


id: GO:0004963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with follicle-stimulating hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"follicle-stimulating hormone receptor activity","synonyms":[{"name":"FSH receptor activity","type":"exact"},{"name":"follicle stimulating hormone receptor activity","type":"exact"}],"termid":"GO:0004963"}


id: GO:0070833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that begins with an initial N-methylation with phospho-base phosphoethanolamine, followed by two downstream N-methylations on phosphatidyl-bases, phosphatidyl-N-methylethanolamine and phosphatidyl-N-dimethylethanolamine. The process ends with the conversion of a phosphatidyl-N-dimethylethanolamine to a phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY4FS-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from phosphoryl-ethanolamine via CDP-N-methylethanolamine","termid":"GO:0070833"}


id: PBO:0050300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 2","termid":"PBO:0050300"}


id: MONDO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign neoplasm that arises from the prostate gland and is characterized by the presence of hyperplastic glands and stroma that contains spindle-shaped cells.","definition_xrefs":["NCIT:C5532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"prostate phyllodes tumor","termid":"MONDO:0021102"},{"relation_name":"is_a","term_name":"benign neoplasm of prostate","termid":"MONDO:0021510"},{"relation_name":"is_a","term_name":"benign phyllodes tumor","termid":"MONDO:0037002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostate phyllodes tumor","secondary_identifiers":["MEDGEN:272364","DOID:2885","UMLS:C1332535"],"synonyms":[{"name":"benign phyllodes neoplasm of prostate","type":"exact"},{"name":"benign phyllodes neoplasm of the prostate","type":"exact"},{"name":"benign phyllodes tumor of prostate","type":"exact"},{"name":"benign phyllodes tumor of the prostate","type":"exact"},{"name":"benign phyllodes tumour of prostate","type":"exact"},{"name":"benign phyllodes tumour of the prostate","type":"exact"},{"name":"benign prostate phyllodes neoplasm","type":"exact"},{"name":"benign prostate phyllodes tumor","type":"exact"},{"name":"phyllodes neoplasm of the prostate","type":"broad"},{"name":"prostate phyllodes tumor","type":"broad"},{"name":"prostate phyllodes tumor, benign","type":"exact"},{"name":"prostate phyllodes tumour","type":"broad"}],"termid":"MONDO:0002451","xrefs":{"Monarch":{"xref_id":"0002451"}}}


id: GO:0061356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a Wnt protein from a cell.","definition_xrefs":["PMID:19223472","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"Wnt protein secretion","termid":"GO:0061355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of Wnt protein secretion","termid":"GO:0061356"}


id: PATO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer exhibiting deterioration of its structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degeneration","termid":"PATO:0002037"}


id: MONDO:0007652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare premalignant hyperproliferative gastropathy characterized by massive overgrowth of foveolar cells in the gastric lining, resulting in large gastric folds, and manifesting with epigastric pain, nausea, vomiting, peripheral edema and, less commonly, anorexia and weight loss.","definition_xrefs":["Orphanet:2494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric mucosal hypertrophy","secondary_identifiers":["EFO:1000946","GARD:2436","ICD9:535.2","ICD9:535.20","MedDRA:10017868","MEDGEN:4844","NORD:1432","icd11.foundation:1343994188","DOID:8757","MedDRA:10017807","ICD9:535.21","UMLS:C0017155","NCIT:C67277","MESH:D005758","OMIM:137280","SCTID:60002000"],"synonyms":[{"name":"MENETRIER disease","type":"exact"},{"name":"Menetrier Disease","type":"exact"},{"name":"Menetrier disease","type":"exact"},{"name":"Menetrier's disease","type":"exact"},{"name":"Ménétrier disease","type":"exact"},{"name":"familial giant hypertrophic gastritis","type":"exact"},{"name":"gastritis, familial giant hypertrophic","type":"related"},{"name":"gastroenteropathy, protein losing","type":"related"},{"name":"giant hypertrophic gastritis","type":"exact"},{"name":"giant hypertrophic gastropathy","type":"related"},{"name":"giant hypertrophy of the gastric mucosa","type":"related"},{"name":"giant rugal hypertrophy of stomach","type":"exact"},{"name":"hypertrophic gastritis","type":"exact"},{"name":"hypertrophic gastropathy","type":"exact"},{"name":"hypoproteinemic hypertrophic gastropathy","type":"exact"}],"termid":"MONDO:0007652","xrefs":{"Monarch":{"xref_id":"0007652"}}}


id: PR:O74480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1840.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.07c","synonyms":[{"name":"Spom972h-SPCC1840.07c","type":"exact"}],"termid":"PR:O74480"}


id: PBO:0049515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 25","termid":"PBO:0049515"}


id: PBO:0080438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS54 subunit of GARP complex","termid":"PBO:0080438"}


id: PBO:0063700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase","termid":"PBO:0063700"}


id: PBO:0090964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apm3","termid":"PBO:0090964"}


id: MONDO:0019873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"4p16.3 microduplication syndrome is a rare genetic syndrome that results from the partial duplication of the short arm of chromosome 4. It has a highly variable phenotype, principally characterized by psychomotor and language delay, seizures and dysmorphic features such as high forehead with frontal bossing, hypertelorism, prominent glabella, long narrow palpebral fissures, low set ears and short neck. Eye abnormalities (glaucoma, irregular iris pigmentation, hyperopia) have also been reported.","definition_xrefs":["Orphanet:96072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 4","termid":"MONDO:0016941"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4p16.3 microduplication syndrome","secondary_identifiers":["MEDGEN:1387521","SCTID:726706008","GARD:19306","UMLS:C4512053"],"synonyms":[{"name":"distal duplication 4p","type":"exact"},{"name":"distal trisomy 4p","type":"exact"},{"name":"telomeric duplication 4p","type":"exact"},{"name":"trisomy 4pter","type":"exact"}],"termid":"MONDO:0019873","xrefs":{"Monarch":{"xref_id":"0019873"}}}


id: PBO:0085850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of the vacuole; mutant has enhanced sensitivity to overexpression of mutant huntingtin; YMR160W is not an essential gene; relative distribution within the vacuolar membrane changes upon DNA replication stress","termid":"PBO:0085850"}


id: GO:0034897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-(1-ethyl-1,4-dimethyl-pentyl)phenol + O2 + 2 H+ + 2 e- = hydroquinone + 3,6-dimethylheptan-3-ol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-(1-ethyl-1,4-dimethyl-pentyl)phenol monooxygenase activity (obsolete GO:0034897)","termid":"GO:0034897"}


id: PATO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's spatial location relative to other objects in the vicinity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"position","secondary_identifiers":["PATO:0001631","PATO:0001032"],"synonyms":[{"name":"location","type":"exact"},{"name":"placement","type":"exact"},{"name":"relational spatial quality","type":"exact"}],"termid":"PATO:0000140"}


id: PBO:0063410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 6","termid":"PBO:0063410"}


id: PBO:0000313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, DUF3321 family","termid":"PBO:0000313"}


id: GO:0035410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5alpha-dihydrotestosterone + NAD+ = 5alpha-androstane-3,17-dione + NADH.","definition_xrefs":["PMID:4152755","GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrotestosterone 17-beta-dehydrogenase activity (obsolete GO:0035410)","termid":"GO:0035410"}


id: PBO:0081700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 622","termid":"PBO:0081700"}


id: FYPO:0005312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which establishment of mitotic sister chromatid cohesion is normal (i.e. indistinguishable from wild type). Establishment of mitotic sister chromatid cohesion is the process in which the sister chromatids of a replicated chromosome become joined along the entire length of the chromosome during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0034087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal establishment of mitotic sister chromatid cohesion","synonyms":[{"name":"normal establishment of mitotic chromosome cohesion","type":"exact"},{"name":"normal establishment of mitotic sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"normal establishment of sister chromatid cohesion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005312"}


id: MONDO:0020574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Germ cell tumors of the central nervous system other than germinoma. This category includes teratoma, choriocarcinoma, embryonal carcinoma, and yolk sac tumor.","definition_xrefs":["NCIT:C100093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"extragonadal non-dysgerminomatous germ cell tumor","termid":"MONDO:0020539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system nongerminomatous germ cell tumor","secondary_identifiers":["UMLS:C1696109","MEDGEN:760465"],"synonyms":[{"name":"central nervous system nongerminomatous germ cell tumor","type":"exact"},{"name":"nongerminomatous GCT - CNS","type":"exact"},{"name":"nongerminomatous germ cell tumor of the CNS","type":"exact"},{"name":"nongerminomatous germ cell tumour of the CNS","type":"exact"}],"termid":"MONDO:0020574","xrefs":{"Monarch":{"xref_id":"0020574"}}}


id: MONDO:0005524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the sweat glands. Representative examples include tubular carcinoma, spiradenocarcinoma, eccrine carcinoma, hidradenocarcinoma, and apocrine carcinoma.","definition_xrefs":["EFO:0005591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland cancer","termid":"MONDO:0002206"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"skin appendage carcinoma","termid":"MONDO:0006973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"sweat gland carcinoma","secondary_identifiers":["ICDO:8400/3","NCIT:C6938","ONCOTREE:AECA","UMLS:C1412016","MEDGEN:234685","DOID:5667"],"synonyms":[{"name":"carcinoma of sweat gland","type":"exact"},{"name":"carcinoma of the sweat gland","type":"exact"},{"name":"carcinoma, sweat gland, malignant","type":"exact"},{"name":"sweat gland carcinoma","type":"exact"},{"name":"sweat gland carcinoma/apocrine eccrine carcinoma","type":"related"}],"termid":"MONDO:0005524","xrefs":{"Monarch":{"xref_id":"0005524"}}}


id: GO:0043633
data:
  {"annotated_genes":["SJAG_16455","SJAG_01431","SJAG_03984","SJAG_01176"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101358],"is_not":false,"summary":null,"term":"GO:0043633"},{"annotations":[99939,113573,76724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043634"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3'-end of the target RNA.","definition_xrefs":["GOC:jl","GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01431":null,"SJAG_03984":null,"SJAG_16455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation-dependent RNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043633","terms_by_termid":{"GO:0043633":null,"GO:0043634":null}}


id: GO:0031541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of flavonoid biosynthetic process","termid":"GO:0009964"},{"relation_name":"is_a","term_name":"negative regulation of anthocyanin metabolic process","termid":"GO:0031538"},{"relation_name":"is_a","term_name":"regulation of anthocyanin biosynthetic process","termid":"GO:0031540"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin biosynthetic process","synonyms":[{"name":"down regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"down-regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"downregulation of anthocyanin biosynthetic process","type":"exact"},{"name":"inhibition of anthocyanin biosynthetic process","type":"narrow"},{"name":"negative regulation of anthocyanin anabolism","type":"exact"},{"name":"negative regulation of anthocyanin biosynthesis","type":"exact"},{"name":"negative regulation of anthocyanin formation","type":"exact"},{"name":"negative regulation of anthocyanin synthesis","type":"exact"}],"termid":"GO:0031541"}


id: GO:0033017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the sarcoplasmic reticulum.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"sarcoplasmic reticulum","termid":"GO:0016529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"sarcoplasmic reticulum membrane","termid":"GO:0033017"}


id: PBO:0038599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aggrecan","termid":"PBO:0038599"}


id: GO:0141215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyltaurine + H2O = acetate + taurine.","definition_xrefs":["PMID:39112712","RHEA:81107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"N-acetyltaurine hydrolase activity","termid":"GO:0141215"}


id: PBO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POlyPloidy","termid":"PBO:0018043"}


id: PBO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Pep5/Vps11-like (predicted)","termid":"PBO:0015232"}


id: GO:0007315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the specialized cytoplasm found at the poles of the egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm organization","termid":"GO:0007028"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"oocyte anterior/posterior axis specification","termid":"GO:0007314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pole plasm assembly","secondary_identifiers":["GO:0048113"],"termid":"GO:0007315"}


id: GO:0031174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation and growth of otoliths throughout the life of the organism. Otoliths are the large extracellular ear-stones of the fish inner ear, produced by precipitation of specific crystal forms of calcium carbonate on organic matrices. The otolith enlarges throughout the life of the fish, as layers of calcium carbonate are added.","definition_xrefs":["GOC:dsf","PMID:15581873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otolith mineralization","termid":"GO:0045299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lifelong otolith mineralization","termid":"GO:0031174"}


id: PBO:0056960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 21","termid":"PBO:0056960"}


id: MONDO:1012698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any necrotising myelopathy that occurs in calves of the Simmental breed of cattle and is characterized by progressive hindlimb ataxia and paralysis and bilateral symmetrical foci of necrosis throughout the grey matter of the brain.","definition_xrefs":["PMID:18503072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotising myelopathy, non-human animal","termid":"MONDO:1011850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal symmetrical necrotizing encephalomyelopathy, Simmental cattle","secondary_identifiers":["OMIA:001490-9913"],"termid":"MONDO:1012698","xrefs":{"Monarch":{"xref_id":"1012698"}}}


id: PBO:0027995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_phase","termid":"PBO:0027995"}


id: PBO:0076578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 6","termid":"PBO:0076578"}


id: PBO:0061616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 2","termid":"PBO:0061616"}


id: GO:0046901
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68824,72595],"is_not":false,"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetrahydrofolylpolyglutamate, a folate derivative comprising tetrahydrofolate attached to a chain of glutamate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"tetrahydrofolylpolyglutamate metabolic process","termid":"GO:0046900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0042559"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"THF polyglutamylation","type":"exact"},{"name":"folic acid-containing compound polyglutamylation","type":"broad"},{"name":"tetrahydrofolate polyglutamylation","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) biosynthesis","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) biosynthetic process","type":"exact"},{"name":"tetrahydrofolylpolyglutamate anabolism","type":"exact"},{"name":"tetrahydrofolylpolyglutamate biosynthesis","type":"exact"},{"name":"tetrahydrofolylpolyglutamate formation","type":"exact"},{"name":"tetrahydrofolylpolyglutamate synthesis","type":"exact"}],"termid":"GO:0046901","terms_by_termid":{"GO:0046901":null}}


id: PR:P21536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.09","synonyms":[{"name":"A6L (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"F-ATPase subunit 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-atp8","type":"exact"}],"termid":"PR:P21536"}


id: GO:0071928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of tyramine binding to a cell surface receptor.","definition_xrefs":["GOC:mah","PMID:15355245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"tyramine signaling pathway","synonyms":[{"name":"tyramine signalling pathway","type":"exact"}],"termid":"GO:0071928"}


id: MOD:00176
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(phosphoribosyl dephospho-coenzyme A)-L-serine.","definition_xrefs":["PubMed:10924139","PubMed:11052675","PubMed:179809","PubMed:180526","Unimod:395#S","PubMed:368065","RESID:AA0167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","synonyms":[{"name":"MOD_RES O-(phosphoribosyl dephospho-coenzyme A)serine","type":"exact"},{"name":"O-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-(phosphate-5-ribosyl-alpha-2-adenosine-5-diphosphate pantetheine)-L-serine","type":"exact"},{"name":"O3-(phosphoribosyl dephospho-coenzyme A)-L-serine","type":"exact"},{"name":"O3-2'-(5''-phosphoribosyl-3'-dephosphocoenzyme A)-L-serine","type":"exact"},{"name":"OPRibdPCoASer","type":"exact"},{"name":"PhosphoribosyldephosphoCoA","type":"related"},{"name":"phosphoribosyl dephospho-coenzyme A","type":"related"}],"termid":"MOD:00176"}


id: GO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased.","definition_xrefs":["GOC:go_curators","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure","synonyms":[{"name":"activation of blood pressure","type":"narrow"},{"name":"stimulation of blood pressure","type":"narrow"},{"name":"up regulation of blood pressure","type":"exact"},{"name":"up-regulation of blood pressure","type":"exact"},{"name":"upregulation of blood pressure","type":"exact"}],"termid":"GO:0045777"}


id: PBO:0044698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 pseudogene 1","termid":"PBO:0044698"}


id: PBO:0077932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 5","termid":"PBO:0077932"}


id: PBO:0085901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may be involved in positive regulation of 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway; multicopy suppressor of temperature-sensitive mutations in CDC24 and CDC42, and of mutations in BEM4; potential Cdc28p substrate; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0085901"}


id: PBO:0045156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 11","termid":"PBO:0045156"}


id: GO:0033854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-arogenate = L-glutamate + prephenate.","definition_xrefs":["EC:2.6.1.79","RHEA:22880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glutamate-prephenate aminotransferase activity","secondary_identifiers":["KEGG_REACTION:R07276","MetaCyc:PREPHENATE-TRANSAMINE-RXN"],"synonyms":[{"name":"L-arogenate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-glutamate:prephenate aminotransferase activity","type":"related"},{"name":"PAT","type":"related"},{"name":"prephenate transaminase activity","type":"broad"}],"termid":"GO:0033854"}


id: GO:0102358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxycoumarin + S-adenosyl-L-methionine = 7-hydroxy-8-methoxycoumarin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:68960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"daphnetin-8-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13448"],"termid":"GO:0102358"}


id: PBO:0086226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that functions in the cell wall integrity pathway; functions upstream of Pkc1p; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS; non-tagged Ack1p is detected in purified mitochondria","termid":"PBO:0086226"}


id: PBO:0085637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in incorporating iron-sulfur clusters into proteins; mitochondrial matrix protein; involved in the incorporation of iron-sulfur clusters into mitochondrial aconitase-type proteins; activates the radical-SAM family members Bio2p and Lip5p; interacts with Ccr4p in the two-hybrid system","termid":"PBO:0085637"}


id: GO:0098581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an external biotic stimulus is detected and converted into a molecular signal. An external biotic stimulus is defined as one caused or produced by a living organism other than the one being stimulated.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of biotic stimulus","termid":"GO:0009595"},{"relation_name":"is_a","term_name":"response to external biotic stimulus","termid":"GO:0043207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of external biotic stimulus","synonyms":[{"name":"detection of exogenous biotic stimulus","type":"exact"}],"termid":"GO:0098581"}


id: GO:0036491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of endoplasmic reticulum stress.","definition_xrefs":["PMID:16835242","GOC:bf","PMID:14676213","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036491"}


id: PBO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 27","termid":"PBO:0046646"}


id: PBO:0053524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 519","termid":"PBO:0053524"}


id: PBO:0050860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator","termid":"PBO:0050860"}


id: PBO:0090860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion protein for conjugation","termid":"PBO:0090860"}


id: PBO:0039741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L3","termid":"PBO:0039741"}


id: PBO:0014573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2-delta","termid":"PBO:0014573"}


id: MONDO:0012076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midface hypoplasia, obesity, developmental delay, and neonatal hypotonia","secondary_identifiers":["UMLS:C1837730","MESH:C563896","OMIM:608624","MEDGEN:325238"],"synonyms":[{"name":"midface hypoplasia, obesity, developmental delay, and neonatal hypotonia","type":"exact"}],"termid":"MONDO:0012076","xrefs":{"Monarch":{"xref_id":"0012076"}}}


id: PBO:0081598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 4","termid":"PBO:0081598"}


id: MONDO:1010781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia areata that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia areata, non-human animal","termid":"MONDO:1010140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata, pig","secondary_identifiers":["OMIA:001702-9823"],"termid":"MONDO:1010781","xrefs":{"Monarch":{"xref_id":"1010781"}}}


id: PBO:0077673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 19","termid":"PBO:0077673"}


id: MONDO:0005458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete q fever (obsolete MONDO:0005458)","termid":"MONDO:0005458","xrefs":{"Monarch":{"xref_id":"0005458"}}}


id: MONDO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic vascular disorder that affects the liver. Representative examples include veno-occlusive disease, hemangioma, lymphangioma, and angiosarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic vascular disorder","secondary_identifiers":["NCIT:C35442","UMLS:C0400923","DOID:272","ICD9:573.8","SCTID:235878005","MEDGEN:140779"],"synonyms":[{"name":"hepatic vascular disorder","type":"exact"},{"name":"liver vascular disorder","type":"exact"},{"name":"vascular disorder of liver","type":"exact"}],"termid":"MONDO:0002405","xrefs":{"Monarch":{"xref_id":"0002405"}}}


id: PBO:0027619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitosis_following_normal_mitosis","termid":"PBO:0027619"}


id: GO:0090427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of meiosis.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"activation of meiosis","termid":"GO:0090427"}


id: PBO:0108909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 3","termid":"PBO:0108909"}


id: PBO:0064674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 9","termid":"PBO:0064674"}


id: GO:1900318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"}


id: PBO:0027176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_telomeric_heterochromatin_assembly","termid":"PBO:0027176"}


id: GO:0043540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric, bifunctional enzyme complex which catalyzes the synthesis and degradation of fructose 2,6-bisphosphate, and is required for both glycolysis and gluconeogenesis.","definition_xrefs":["GOC:so","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005829"],"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex","synonyms":[{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 complex","type":"narrow"},{"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 complex","type":"narrow"}],"termid":"GO:0043540"}


id: MONDO:0022071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carbon baby syndrome, also known as universal acquired melanosis, is a rare form of hyperpigmentation. The skin of affected infants progressively darkens over the first years of life in the absence of other symptoms. The cause of the condition is unknown.","definition_xrefs":["GARD:0001089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon baby syndrome","secondary_identifiers":["UMLS:C0406419","MEDGEN:98349","SCTID:238700008"],"synonyms":[{"name":"universal acquired melanosis","type":"related"}],"termid":"MONDO:0022071","xrefs":{"Monarch":{"xref_id":"0022071"}}}


id: GO:0035813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the amount of sodium excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of excretion","termid":"GO:0044062"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal sodium excretion","termid":"GO:0035812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of renal sodium excretion","termid":"GO:0035813"}


id: PBO:0109080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3104","termid":"PBO:0109080"}


id: PBO:0114387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulphite transmembrane transporter Ssu4","termid":"PBO:0114387"}


id: SO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron which is spliced by the spliceosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosomal_intron","synonyms":[{"name":"spliceosomal intron","type":"exact"}],"termid":"SO:0000662"}


id: PBO:0030409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell_during_vegetative_growth","termid":"PBO:0030409"}


id: SO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 56th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K56_acetylation_site","synonyms":[{"name":"H3K56 acetylation site","type":"exact"},{"name":"H3K56ac","type":"exact"}],"termid":"SO:0001945"}


id: PBO:0064332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 2","termid":"PBO:0064332"}


id: FYPO:0005741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal invertase activity","synonyms":[{"name":"abnormal beta-fructofuranosidase activity","type":"exact"}],"termid":"FYPO:0005741"}


id: GO:0038154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of interleukin-11 to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-11-mediated signaling pathway","synonyms":[{"name":"IL-11-mediated signaling pathway","type":"exact"},{"name":"interleukin-11-mediated signalling pathway","type":"exact"}],"termid":"GO:0038154"}


id: PBO:0069143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 394, pseudogene","termid":"PBO:0069143"}


id: GO:0070516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the cyclin-dependent protein kinase activating kinase (CAK) holoenzyme complex with ERCC2.","definition_xrefs":["PMID:8692842","PMID:8692841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CAK-ERCC2 complex","synonyms":[{"name":"cyclin-dependent protein kinase activating kinase holoenzyme-ERCC2 complex","type":"exact"}],"termid":"GO:0070516"}


id: PBO:0064931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG related coactivator 1","termid":"PBO:0064931"}


id: FYPO:0000304
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000087"},{"annotations":[119648,119660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000726"},{"annotations":[119647,119659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a stress. Typically, a cell population is deemed sensitive to a stress if cells in the population stop growing (and may die) when exposed to the stress at an intensity that allows a population of wild type cells to grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell population growth phenotype","termid":"FYPO:0001358"},{"relation_name":"is_a","term_name":"sensitive to stress","termid":"FYPO:0002549"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null,"SJAG_04312":null},"genotype_count":3,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to stress during vegetative growth","references_by_uniquename":{"PMID:27678009":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_04312","SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["atf1delta","pka1delta","sty1delta"],"synonyms":[{"name":"decreased growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to stress during vegetative growth","type":"exact"},{"name":"hypersensitive to stress during vegetative growth","type":"exact"},{"name":"sensitive to stress during mitotic cell cycle","type":"related"},{"name":"stress resistance: decreased during vegetative growth","type":"related"}],"termid":"FYPO:0000304","terms_by_termid":{"FYECO:0000078":null,"FYECO:0000207":null,"FYPO:0000087":null,"FYPO:0000271":null,"FYPO:0000726":null,"FYPO_EXT:0000001":null}}


id: MONDO:0015814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary lymphoma of the skin composed of various numbers of small and large irregular neoplastic follicle center cells. Its morphologic pattern can be nodular, diffuse, or nodular and diffuse. It presents with solitary or grouped plaques and tumors, and it usually involves the scalp, forehead, or trunk. It rarely involves the legs. This type of cutaneous lymphoma tends to remain localized to the skin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indolent primary cutaneous B-cell lymphoma","termid":"MONDO:0015819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous follicle center lymphoma","secondary_identifiers":["ONCOTREE:PCFCL","MEDGEN:234180","icd11.foundation:77501812","ICDO:9597/3","GARD:13701","Orphanet:178540","SCTID:404143002","UMLS:C1333171","NCIT:C7217"],"synonyms":[{"name":"Crosti's disease","type":"exact"},{"name":"PCFCL","type":"exact"},{"name":"Reticulohistiocytoma of the dorsum","type":"exact"},{"name":"cutaneous follicle center lymphoma","type":"exact"},{"name":"cutaneous follicle centre lymphoma","type":"exact"}],"termid":"MONDO:0015814","xrefs":{"Monarch":{"xref_id":"0015814"}}}


id: PBO:0030560
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding","termid":"PBO:0030560"}


id: PBO:0042070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 138","termid":"PBO:0042070"}


id: PBO:0008887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi at silenced MAT3 locus","termid":"PBO:0008887"}


id: FYPO:0007985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly occurs earlier than normal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["PMID:15068790","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eMTOC assembly","termid":"FYPO:0005690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"early eMTOC assembly","termid":"FYPO:0007985"}


id: GO:0046254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene catabolic process","termid":"GO:0042203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic toluene catabolic process","secondary_identifiers":["MetaCyc:PWY-81"],"synonyms":[{"name":"anaerobic toluene breakdown","type":"exact"},{"name":"anaerobic toluene catabolism","type":"exact"},{"name":"anaerobic toluene degradation","type":"exact"}],"termid":"GO:0046254"}


id: MONDO:0024627
data:
  {"annotated_genes":["SJAG_00739","SJAG_04743","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[86417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"},{"annotations":[87065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01351":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"phagocytic cell dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0398732","MEDGEN:585044","SCTID:302874002"],"synonyms":[{"name":"defective phagocytosis","type":"exact"},{"name":"phagocytic cell dysfunction","type":"exact"}],"termid":"MONDO:0024627","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null,"MONDO:0010600":null,"MONDO:0044208":null},"xrefs":{"Monarch":{"xref_id":"0024627"}}}


id: PBO:0086135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for meiotic recombination and gene conversion; null mutant displays reduced PIS1 expression and growth defects on non-fermentable carbon sources and minimal media; GFP-fusion protein localizes to both cytoplasm and nucleus","termid":"PBO:0086135"}


id: GO:0019611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-toluenecarboxylate, 4-methylbenzenecarboxylate, the anion of carboxylic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-toluenecarboxylate metabolic process","synonyms":[{"name":"4-toluenecarboxylate metabolism","type":"exact"},{"name":"p-toluate metabolic process","type":"exact"},{"name":"p-toluate metabolism","type":"exact"}],"termid":"GO:0019611"}


id: PBO:0040923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin 1","termid":"PBO:0040923"}


id: PBO:0005592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific protein kinase Mug27/Slk1","termid":"PBO:0005592"}


id: MONDO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete homocarnosinosis (obsolete MONDO:0000699)","termid":"MONDO:0000699","xrefs":{"Monarch":{"xref_id":"0000699"}}}


id: MONDO:0036915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the ovary and is characterized by the presence of neoplastic epithelium that resembles the epithelium of the endocervix or gastrointestinal tract. It includes mucinous adenofibroma, mucinous cystadenofibroma, and mucinous cystadenoma.","definition_xrefs":["NCIT:C40039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ovarian mucinous tumor","secondary_identifiers":["MEDGEN:267038","UMLS:C1511100"],"synonyms":[{"name":"benign ovarian mucinous neoplasm","type":"exact"},{"name":"benign ovarian mucinous tumor","type":"exact"},{"name":"ovarian mucinous neoplasm, benign","type":"exact"}],"termid":"MONDO:0036915","xrefs":{"Monarch":{"xref_id":"0036915"}}}


id: PBO:0077420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 158","termid":"PBO:0077420"}


id: PBO:0089779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex linker Mto1","termid":"PBO:0089779"}


id: PBO:0039930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 35","termid":"PBO:0039930"}


id: PBO:0041284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 9","termid":"PBO:0041284"}


id: PBO:0091168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIIa","termid":"PBO:0091168"}


id: FYPO:0006355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription begins later than normal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription during glucose starvation","termid":"FYPO:0006354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of transcription during glucose starvation","synonyms":[{"name":"delayed onset of transcription during cellular response to glucose starvation","type":"exact"},{"name":"delayed onset of transcription during glucose depletion","type":"exact"},{"name":"delayed onset of transcription during glucose deprivation","type":"exact"},{"name":"delayed onset of transcription during glucose limitation","type":"related"},{"name":"delayed onset of transcription in response to glucose starvation","type":"exact"},{"name":"delayed transcription during glucose starvation","type":"exact"}],"termid":"FYPO:0006355"}


id: MONDO:0019718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal chondrodysplasia (obsolete MONDO:0019718)","secondary_identifiers":["Orphanet:93465"],"termid":"MONDO:0019718","xrefs":{"Monarch":{"xref_id":"0019718"}}}


id: MONDO:0012422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 2q24.3.","definition_xrefs":["PMID:16699517","DOID:0110756","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 19","secondary_identifiers":["OMIM:610155","UMLS:C1857808","MEDGEN:346669","MESH:C565715"],"synonyms":[{"name":"IDDM19","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 19","type":"related"},{"name":"insulin-dependent diabetes mellitus 19","type":"exact"}],"termid":"MONDO:0012422","xrefs":{"Monarch":{"xref_id":"0012422"}}}


id: PBO:0061384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 44","termid":"PBO:0061384"}


id: MONDO:1010430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis, non-human animal","termid":"MONDO:1010008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis, dog","secondary_identifiers":["OMIA:000080-9615"],"termid":"MONDO:1010430","xrefs":{"Monarch":{"xref_id":"1010430"}}}


id: PBO:0091427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase","termid":"PBO:0091427"}


id: MONDO:0044083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Opportunistic fungal infection by a member of Alternaria genus.","definition_xrefs":["MESH:D060487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternariosis","secondary_identifiers":["SCTID:238436005","UMLS:C3178962","MEDGEN:465430"],"synonyms":[{"name":"Alternarioses","type":"related"},{"name":"Alternarioses, cutaneous","type":"related"},{"name":"Alternarioses, dermal","type":"related"},{"name":"Alternarioses, subcutaneous","type":"related"},{"name":"Alternariosis, cutaneous","type":"related"},{"name":"Alternariosis, dermal","type":"related"},{"name":"Alternariosis, subcutaneous","type":"related"},{"name":"cutaneous Alternarioses","type":"related"},{"name":"cutaneous Alternariosis","type":"related"},{"name":"cutaneous alternariosis","type":"exact"},{"name":"dermal Alternarioses","type":"related"},{"name":"dermal Alternariosis","type":"related"},{"name":"subcutaneous Alternarioses","type":"related"},{"name":"subcutaneous Alternariosis","type":"related"}],"termid":"MONDO:0044083","xrefs":{"Monarch":{"xref_id":"0044083"}}}


id: PBO:0088434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease Cdb4","termid":"PBO:0088434"}


id: GO:0170061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Directly binding to and delivering nickel ions to a target protein.","definition_xrefs":["PMID:34530332","PMID:32133383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"nickel chaperone activity","synonyms":[{"name":"nickel carrier activity","type":"exact"}],"termid":"GO:0170061"}


id: PBO:0060269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 3","termid":"PBO:0060269"}


id: MONDO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreoretinal dystrophy","secondary_identifiers":["UMLS:C0154863","ICD9:362.73","SCTID:79556007","ICD10CM:H35.51","icd11.foundation:817777781","MEDGEN:509690","DOID:14251"],"synonyms":[{"name":"vitreoretinal dystrophies","type":"exact"}],"termid":"MONDO:0001923","xrefs":{"Monarch":{"xref_id":"0001923"}}}


id: GO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung-associated mesenchyme from an initial condition to its mature state. This process begins with the formation of lung-associated mesenchyme and ends with the mature structure. Lung-associated mesenchyme is the tissue made up of loosely connected mesenchymal cells in the lung.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung-associated mesenchyme development","synonyms":[{"name":"lung mesenchyme development","type":"exact"},{"name":"pulmonary mesenchyme development","type":"exact"}],"termid":"GO:0060484"}


id: PBO:0113496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has paralog ANB1 that arose from whole genome duplication; in humans EIF5A variants cause a disorder characterized by variable combinations of developmental delay, microcephaly, micrognathia and dysmorphism; human EIF5A complements inviability of yeast hyp2 anb1 double null mutant","termid":"PBO:0113496"}


id: GO:0060198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted vesicle","synonyms":[{"name":"clathrin sculpted vesicle","type":"exact"}],"termid":"GO:0060198"}


id: PR:O13681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ima1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein ima1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.03c","synonyms":[{"name":"Spom972h-ima1","type":"exact"}],"termid":"PR:O13681"}


id: GO:0050824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to water (H2O).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete water binding (obsolete GO:0050824)","termid":"GO:0050824"}


id: GO:1900985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vindoline.","definition_xrefs":["PMID:12228585","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"vindoline metabolic process","termid":"GO:1900983"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"vindoline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5292"],"synonyms":[{"name":"vindoline anabolism","type":"exact"},{"name":"vindoline biosynthesis","type":"exact"},{"name":"vindoline formation","type":"exact"},{"name":"vindoline synthesis","type":"exact"}],"termid":"GO:1900985"}


id: PBO:0034412
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_maturation_of","termid":"PBO:0034412"}


id: MONDO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from immature B and T cells","definition_xrefs":["EFO:0002425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid neoplasm","termid":"MONDO:0005157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"neoplasm of immature B and T cells","termid":"MONDO:0005168","xrefs":{"Monarch":{"xref_id":"0005168"}}}


id: GO:1900471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of inositol biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8056324","GOC:dgf","PMID:8614637","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900471)","synonyms":[{"name":"negative regulation of inositol anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of myo-inositol biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of myo-inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of vitamin Bh biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of vitamin Bh biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900471"}


id: PBO:0048964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein A33","termid":"PBO:0048964"}


id: GO:0031506
data:
  {"annotated_genes":["SJAG_01264","SJAG_04906","SJAG_01021","SJAG_04770","SJAG_01276","SJAG_00816","SJAG_02519","SJAG_03082","SJAG_00598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77427,80783,78385,74922,77978,79708,72429,87845,75151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cell wall glycoproteins, any cell wall protein that contains covalently bound sugar residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00598":null,"SJAG_00816":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_04770":null,"SJAG_04906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell wall glycoprotein anabolism","type":"exact"},{"name":"cell wall glycoprotein biosynthesis","type":"exact"},{"name":"cell wall glycoprotein formation","type":"exact"},{"name":"cell wall glycoprotein synthesis","type":"exact"}],"termid":"GO:0031506","terms_by_termid":{"GO:0000032":null}}


id: PATO:0000985
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A porosity quality inhering in a bearer by virtue of the bearer's being incapable of admitting the passage of gas or liquid through pores or interstices.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porosity","termid":"PATO:0000973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-porous","termid":"PATO:0000985"}


id: MONDO:0018677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic disorder in which symptoms are generally secondary to the abnormal location of the organs within the thoracic, abdominal, or peritoneal cavities. Anatomic and functional problems can include cardiac defects, intestinal malrotation leading to volvulus, biliary atresia, and various defects of the central nervous system, urinary tract, and skeleton.","definition_xrefs":["NCIT:C117273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visceral heterotaxy","secondary_identifiers":["Orphanet:450","OMIMPS:306955","DOID:0050545","Orphanet:157769","icd11.foundation:780273165","MedDRA:10059119","SCTID:14821001","MEDGEN:465273","MedDRA:10067265","GARD:10875","UMLS:C3178805"],"synonyms":[{"name":"heterotaxia","type":"exact"},{"name":"heterotaxia syndrome","type":"exact"},{"name":"heterotaxy syndrome","type":"exact"},{"name":"heterotaxy, visceral","type":"exact"},{"name":"incomplete situs inversus","type":"exact"},{"name":"lateralization defect","type":"exact"},{"name":"partial situs inversus","type":"exact"},{"name":"situs ambiguous","type":"exact"},{"name":"situs ambiguus","type":"exact"},{"name":"visceral heterotaxy","type":"exact"}],"termid":"MONDO:0018677","xrefs":{"Monarch":{"xref_id":"0018677"}}}


id: PBO:0024836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9 (predicted)","termid":"PBO:0024836"}


id: GO:0097206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which hemolymph is filtered based on size and charge through a nephrocyte filtration barrier formed by the basement membrane and nephrocyte diaphragm.","definition_xrefs":["GOC:sart","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration","termid":"GO:0097205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrocyte filtration","termid":"GO:0097206"}


id: SO:0000795
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mini_gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rescue","termid":"SO:0000814"},{"relation_name":"is_a","term_name":"mini_gene","termid":"SO:0000815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue_mini_gene","synonyms":[{"name":"rescue mini gene","type":"exact"},{"name":"rescue mini-gene","type":"exact"}],"termid":"SO:0000795"}


id: PBO:0044533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystroglycan 1","termid":"PBO:0044533"}


id: PBO:0091791
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clotrimazole-sensitive","termid":"PBO:0091791"}


id: PBO:0063291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 5","termid":"PBO:0063291"}


id: PBO:0073422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like 2","termid":"PBO:0073422"}


id: PBO:0072534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 64","termid":"PBO:0072534"}


id: GO:0004638
data:
  {"annotated_genes":["SJAG_01081"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64554],"is_not":false,"summary":null,"term":"GO:0004638"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate + 2 H+ = 5-amino-1-(5-phospho-D-ribosyl)imidazole + CO2.","definition_xrefs":["EC:4.1.1.21","RHEA:10792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R04209","Reactome:R-HSA-73806","MetaCyc:AIRCARBOXY-RXN"],"synonyms":[{"name":"1-(5-phosphoribosyl)-5-amino-4-imidazolecarboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase [5-amino-1-(5-phospho-D-ribosyl)imidazole-forming]","type":"related"},{"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate carboxy-lyase activity","type":"related"},{"name":"5-amino-1-ribosylimidazole 5-phosphate carboxylase activity","type":"related"},{"name":"5-phosphoribosyl-5-aminoimidazole carboxylase activity","type":"related"},{"name":"ADE2","type":"related"},{"name":"AIR carboxylase activity","type":"related"},{"name":"class II PurE","type":"related"}],"termid":"GO:0004638","terms_by_termid":{"GO:0004638":null}}


id: GO:0070068
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains VAMP4, syntaxin 6, syntaxin 16, and Vti1a (or orthologs thereof).","definition_xrefs":["PMID:11839770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"VAMP4-syntaxin-6-syntaxin-16-Vti1a complex","synonyms":[{"name":"SNARE complex (Vamp4, Stx6, Stx16, Vti1a)","type":"narrow"},{"name":"Vamp4-Stx6-Stx16-Vti1a complex","type":"related"}],"termid":"GO:0070068"}


id: GO:0047916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-6-deoxy-D-talose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-talose + NAD(P)H + H+.","definition_xrefs":["MetaCyc:GDP-6-DEOXY-D-TALOSE-4-DEHYDROGENASE-RXN","EC:1.1.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"GDP-6-deoxy-D-talose 4-dehydrogenase activity","synonyms":[{"name":"GDP-6-deoxy-D-talose:NAD(P)+ 4-oxidoreductase activity","type":"related"},{"name":"guanosine diphospho-6-deoxy-D-talose dehydrogenase activity","type":"related"}],"termid":"GO:0047916"}


id: FYECO:0000314
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119533,119478,119667,119671,119397,119398,119399,119396,119400,119507,119508,119509,119510,119511,119512,119514,119515,119674,119443,119679,119680,119444,119473,119485,119489,119494,119497,119673,119676,119668,119672],"is_not":false,"summary":null,"term":"FYECO:0000314"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which camptothecin (CPT) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00610":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01787":null,"SJAG_02013":null,"SJAG_02266":null,"SJAG_02576":null,"SJAG_02592":null,"SJAG_02771":null,"SJAG_03720":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":21,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"rad1delta":{"display_name":"rad1delta","display_uniquename":"rad1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02771:allele-1","expression":"Null"}]}]},"rad24delta":{"display_name":"rad24delta","display_uniquename":"rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"rad25delta":{"display_name":"rad25delta","display_uniquename":"rad25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02576:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ CPT","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_01605","SJAG_00266","SJAG_00429","SJAG_01787","SJAG_03720","SJAG_02592","SJAG_01205","SJAG_02771","SJAG_00364","SJAG_02266","SJAG_02576","SJAG_02013","SJAG_04697","SJAG_00610","SJAG_00124","SJAG_01410","SJAG_01680"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta","pyp1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","rad3delta","rad26delta","rad25delta","rad9delta","rad51delta","atf1delta","crb2delta","gms1delta","SJAG_00124delta","pck2delta","pmk1delta","rad24delta","sty1delta","tel1delta","chk1delta","rad1delta"],"synonyms":[{"name":"+ camptothecin","type":"exact"}],"termid":"FYECO:0000314","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0048038
data:
  {"annotated_genes":["SJAG_02398","SJAG_04223","SJAG_03198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71154],"is_not":false,"summary":null,"term":"GO:0048038"},{"annotations":[77175,115519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048039"}]},"cv_name":"molecular_function","definition":"Binding to a quinone, any member of a class of diketones derivable from aromatic compounds by conversion of two CH groups into CO groups with any necessary rearrangement of double bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_03198":null,"SJAG_04223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"quinone binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048038","terms_by_termid":{"GO:0048038":null,"GO:0048039":null}}


id: GO:0098758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-8","synonyms":[{"name":"response to IL-8","type":"exact"}],"termid":"GO:0098758"}


id: PBO:0086151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear retention of unspliced pre-mRNAs; required along with Mlp1p and Pml1p; anchored to nuclear pore complex via Mlp1p and Mlp2p; found with the subset of nuclear pores farthest from the nucleolus; may interact with ribosomes","termid":"PBO:0086151"}


id: PBO:0083450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene COX20/YDR231C","termid":"PBO:0083450"}


id: PBO:0108921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMX1 pseudogene 1","termid":"PBO:0108921"}


id: GO:0031118
data:
  {"annotated_genes":["SJAG_01172","SJAG_00083","SJAG_03572","SJAG_01234","SJAG_00566","SJAG_04754","SJAG_03755"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78129,80467,90353],"is_not":false,"summary":null,"term":"GO:0031118"},{"annotations":[57318,75988,106548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[74859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_03572":null,"SJAG_03755":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0044085","GO:0042254"],"is_obsolete":false,"name":"rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0031118","terms_by_termid":{"GO:0000454":null,"GO:0000455":null,"GO:0031118":null}}


id: MONDO:0008000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 1","secondary_identifiers":["ICD9:346.90","OMIM:157300","ICD9:346.80","MEDGEN:854348","UMLS:C3887485","SCTID:37796009"],"synonyms":[{"name":"Mgau","type":"related"},{"name":"Mgr1","type":"related"},{"name":"migraine","type":"related"},{"name":"migraine with or without aura, susceptibility to, 1","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 1","type":"exact"},{"name":"migraine without aura, susceptibility to","type":"exact"},{"name":"migraine, resistance to","type":"exact"},{"name":"migraine, susceptibility to","type":"exact"}],"termid":"MONDO:0008000","xrefs":{"Monarch":{"xref_id":"0008000"}}}


id: PBO:0062901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase NAD binding domain containing 1","termid":"PBO:0062901"}


id: PBO:0074544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SND1 intronic transcript 1","termid":"PBO:0074544"}


id: PBO:0064961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 13","termid":"PBO:0064961"}


id: PBO:0046133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5","termid":"PBO:0046133"}


id: GO:0140893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + amino acid(out) + Na+(out) = H+(out) + amino acid(in) + Na+(in).","definition_xrefs":["PMID:11698233","PMID:34704597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"neutral amino acid, sodium:proton antiporter activity","secondary_identifiers":["TC:2.A.18.6.8"],"synonyms":[{"name":"amino acid-coupled Na+/H+ exchanger activity","type":"exact"}],"termid":"GO:0140893"}


id: GO:0047693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = AMP + H+ + diphosphate.","definition_xrefs":["RHEA:14245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0047429"],"is_obsolete":false,"name":"ATP diphosphatase activity","secondary_identifiers":["MetaCyc:ATP-PYROPHOSPHATASE-RXN","EC:3.6.1.8"],"synonyms":[{"name":"ATP diphosphohydrolase","type":"broad"},{"name":"ATP diphosphohydrolase (diphosphate-forming)","type":"exact"},{"name":"ATP pyrophosphatase activity","type":"exact"},{"name":"adenosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0047693"}


id: PBO:0113388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; overlaps tRNA-Thr/YNCP0016W","termid":"PBO:0113388"}


id: PBO:0088094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uncharacterized protein of unknown function","termid":"PBO:0088094"}


id: PBO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh4 (predicted)","termid":"PBO:0009082"}


id: PBO:0079158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 17","termid":"PBO:0079158"}


id: SO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The propeptide_cleavage_site is the arginine/lysine boundary on a propeptide where cleavage occurs.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"propeptide","termid":"SO:0001062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"propeptide_cleavage_site","secondary_identifiers":["BS:00063"],"synonyms":[{"name":"propeptide cleavage site","type":"exact"}],"termid":"SO:0001061"}


id: GO:0098744
data:
  {"annotated_genes":["SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91559],"is_not":false,"summary":null,"term":"GO:0098744"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of 1-phosphatidylinositol 4-kinase.","definition_xrefs":["PMID:21288895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"},{"relation_name":"positively_regulates","term_name":"1-phosphatidylinositol 4-kinase activity","termid":"GO:0004430"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016740"},{"rel_name":"positively_regulates","termid":"GO:0016301"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"positively_regulates","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003824","GO:0140677","GO:0016740","GO:0003674","GO:0030234","GO:0016301","GO:0098772"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098744","terms_by_termid":{"GO:0098744":null}}


id: PBO:0077204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TM4SF19-DYNLT2B readthrough (NMD candidate)","termid":"PBO:0077204"}


id: MONDO:0004892
data:
  {"annotated_genes":["SJAG_04553","SJAG_03233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032941"},{"annotations":[86396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"A defect in the focusing of light on the retina as in astigmatism, myopia, or hyperopia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03233":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"refractive error","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:20508","MESH:D012030","UMLS:C0034951","SCTID:39021009","DOID:9835"],"termid":"MONDO:0004892","terms_by_termid":{"MONDO:0012154":null,"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0004892"}}}


id: PBO:0113310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic crossing over; component of the Synaptonemal Complex (SC) along with Ecm11p; required for the efficient loading of the SC transverse filament protein, Zip1p; promotes SUMOylation of Ecm11p; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; transcription is regulated by Ume6p and induced in response to alpha factor; also detected in peroxisomes","termid":"PBO:0113310"}


id: PBO:0067604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 769, pseudogene","termid":"PBO:0067604"}


id: PBO:0017716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold TPR subunit Apc5","termid":"PBO:0017716"}


id: PBO:0031443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_vegetative_growth","termid":"PBO:0031443"}


id: PBO:0070965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 3","termid":"PBO:0070965"}


id: MONDO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebroretinal microangiopathy with calcifications and cysts (obsolete MONDO:0000221)","termid":"MONDO:0000221","xrefs":{"Monarch":{"xref_id":"0000221"}}}


id: GO:0046002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of progression through the preblastoderm mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of preblastoderm mitotic cell cycle","termid":"GO:0007347"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle, embryonic","termid":"GO:0045977"},{"relation_name":"positively_regulates","term_name":"preblastoderm mitotic cell cycle","termid":"GO:0035185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of preblastoderm mitotic cell cycle","synonyms":[{"name":"activation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"positive regulation of preblastoderm mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"stimulation of progression through preblastoderm mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through preblastoderm mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through preblastoderm mitotic cell cycle","type":"exact"}],"termid":"GO:0046002"}


id: PBO:0003718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Cdc28","termid":"PBO:0003718"}


id: PBO:0051457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-43","termid":"PBO:0051457"}


id: PBO:0111691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 QL1","termid":"PBO:0111691"}


id: PBO:0027036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_spindle_disassembly","termid":"PBO:0027036"}


id: GO:1902089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in lateral root development.","definition_xrefs":["GOC:TermGenie","PMID:23479623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"lateral root development","termid":"GO:0048527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in lateral root development","synonyms":[{"name":"cell wall polysaccharide breakdown involved in lateral root development","type":"exact"}],"termid":"GO:1902089"}


id: PBO:0079296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 13","termid":"PBO:0079296"}


id: GO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.","definition_xrefs":["ISBN:0140513590","GOC:das","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic respiration","secondary_identifiers":["Wikipedia:Anaerobic_respiration","MetaCyc:ANAEROBIC-RESPIRATION","Wikipedia:Cellular_respiration#Anaerobic_respiration"],"termid":"GO:0009061"}


id: GO:0052026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts transcription in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host transcription","synonyms":[{"name":"modulation by symbiont of host transcription","type":"exact"}],"termid":"GO:0052026"}


id: GO:1902751
data:
  {"annotated_genes":["SJAG_01805","SJAG_03486","SJAG_01901","SJAG_04486","SJAG_03067","SJAG_03309","SJAG_01000","SJAG_04597","SJAG_00117","SJAG_03602","SJAG_04332","SJAG_00256","SJAG_00214","SJAG_01456","SJAG_00883","SJAG_03592","SJAG_02592","SJAG_01837","SJAG_00216","SJAG_02342","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94142,94708,92477,73885,88389,94747,102076,116783,71139,88398,99325,92073,110655,116971,103807,111510,98755,108889,107549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[101707,88191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[73890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"Any signaling pathway that activates or increases the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G2 phase to M phase of the cell cycle.","definition_xrefs":["GOC:jl","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of cell cycle G2/M phase transition","termid":"GO:1902749"},{"relation_name":"positively_regulates","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01456":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03486":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_04140":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle G2/M phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell cycle G2/M phase transition","type":"narrow"},{"name":"up regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"up-regulation of cell cycle G2/M phase transition","type":"exact"},{"name":"upregulation of cell cycle G2/M phase transition","type":"exact"}],"termid":"GO:1902751","terms_by_termid":{"GO:0010971":null,"GO:0110032":null,"GO:1905287":null}}


id: PBO:0047632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 1","termid":"PBO:0047632"}


id: MOD:01891
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-histidine residue to form N-[(L-histidin-1'-yl)methyl]-L-methionine.","definition_xrefs":["PubMed:19622680","RESID:AA0566#MET"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine (Met)","synonyms":[{"name":"(2S)-2-([(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)methyl]amino)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-[(L-histidin-1'-yl)methyl]-L-methionine","type":"exact"}],"termid":"MOD:01891"}


id: PBO:0030163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylserine_level","termid":"PBO:0030163"}


id: GO:0071488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very low light intensity stimulus. A very low light intensity stimulus is defined as a level of electromagnetic radiation below 0.001 mmol/m2/sec.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to very low light intensity stimulus","termid":"GO:0055122"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to very low light intensity stimulus","termid":"GO:0071488"}


id: PBO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030413"}


id: MONDO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rheumatic heart disease (obsolete MONDO:0000472)","termid":"MONDO:0000472","xrefs":{"Monarch":{"xref_id":"0000472"}}}


id: PBO:0008211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr5 protein","termid":"PBO:0008211"}


id: MONDO:1011763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal acrodermatitis, non-human animal","secondary_identifiers":["OMIA:002146"],"termid":"MONDO:1011763","xrefs":{"Monarch":{"xref_id":"1011763"}}}


id: PBO:0070464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 7","termid":"PBO:0070464"}


id: FYPO:0001460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is increased following a calcium ion stimulus.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription from CDRE promoter in response to calcium ion","synonyms":[{"name":"increased transcription from CDRE promoter in response to calcium ion during mitotic cell cycle","type":"related"},{"name":"increased transcription from CDRE promoter in response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0001460"}


id: PBO:0011483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase, trifunctional enzyme","termid":"PBO:0011483"}


id: PBO:0040166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylserotonin O-methyltransferase like","termid":"PBO:0040166"}


id: GO:0031268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a pseudopodium, a temporary protrusion or retractile process of a cell, associated with cellular movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudopodium organization","synonyms":[{"name":"pseudopodium organisation","type":"exact"},{"name":"pseudopodium organization and biogenesis","type":"related"}],"termid":"GO:0031268"}


id: PBO:0076044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase like domain containing 1","termid":"PBO:0076044"}


id: GO:0070629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->4)-alpha-glucans, compounds composed of glucose residues linked by (1->4)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"(1->4)-alpha-glucan metabolic process","synonyms":[{"name":"(1->4)-alpha-D-glucan metabolism","type":"exact"},{"name":"1,4-alpha-D-glucan metabolism","type":"exact"},{"name":"1,4-alpha-glucan metabolism","type":"exact"},{"name":"alpha-1,4 glucan metabolic process","type":"exact"},{"name":"alpha-1,4 glucan metabolism","type":"exact"}],"termid":"GO:0070629"}


id: MONDO:0044878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that occurs during adulthood.","definition_xrefs":["NCIT:C114777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult germ cell tumor","secondary_identifiers":["UMLS:C3900101","MEDGEN:859695"],"synonyms":[{"name":"Adult germ cell tumor","type":"exact"},{"name":"Adult germ cell tumour","type":"exact"},{"name":"germ cell tumor","type":"broad"},{"name":"germ cell tumor of adults","type":"exact"},{"name":"germ cell tumour","type":"broad"},{"name":"germ cell tumour of adults","type":"exact"}],"termid":"MONDO:0044878","xrefs":{"Monarch":{"xref_id":"0044878"}}}


id: PBO:0039299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG13 UDP-N-acetylglucosaminyltransferase subunit","termid":"PBO:0039299"}


id: GO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell proliferation","synonyms":[{"name":"activation of endothelial cell proliferation","type":"narrow"},{"name":"stimulation of endothelial cell proliferation","type":"narrow"},{"name":"up regulation of endothelial cell proliferation","type":"exact"},{"name":"up-regulation of endothelial cell proliferation","type":"exact"},{"name":"upregulation of endothelial cell proliferation","type":"exact"}],"termid":"GO:0001938"}


id: GO:0004620
data:
  {"annotated_genes":["SJAG_00199","SJAG_04292","SJAG_02091","SJAG_02093","SJAG_01198","SJAG_04110","SJAG_02161","SJAG_00321","SJAG_01219","SJAG_04323","SJAG_03204","SJAG_02100","SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76106,78439],"is_not":false,"summary":null,"term":"GO:0004620"},{"annotations":[65172,94262,67843,66318,71155,114365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004622"},{"annotations":[109136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"},{"annotations":[98097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034479"},{"annotations":[73145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004435"},{"annotations":[71413,76858,78910,77761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004623"},{"annotations":[74692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004630"},{"annotations":[63268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004767"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a glycerophospholipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activity","termid":"GO:0016298"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_00321":null,"SJAG_01198":null,"SJAG_01219":null,"SJAG_01519":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_03204":null,"SJAG_04110":null,"SJAG_04292":null,"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"phospholipase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6792445","Reactome:R-HSA-6786650"],"termid":"GO:0004620","terms_by_termid":{"GO:0004435":null,"GO:0004620":null,"GO:0004622":null,"GO:0004623":null,"GO:0004630":null,"GO:0004767":null,"GO:0034479":null,"GO:0052714":null}}


id: PBO:0014602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, 7SK RNA methyltransferase (predicted)","termid":"PBO:0014602"}


id: MONDO:0009133
data:
  {"annotated_genes":["SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"}]},"cv_name":"mondo","definition":"A non-progressive cerebellar disorder characterized by ataxia associated with an intellectual disability, delayed ambulation and cerebellar hypoplasia.","definition_xrefs":["Orphanet:1766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01945":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:98295","UMLS:C0394006","MedDRA:10013140","DOID:0050997","SCTID:230782004","GARD:1998","OMIMPS:224050","MESH:C535731","NCIT:C114781"],"synonyms":[{"name":"CAMRQ","type":"exact"},{"name":"CAMRQ syndrome","type":"exact"},{"name":"DES","type":"related"},{"name":"VLDLRCH","type":"related"},{"name":"cerebellar ataxia, mental retardation and dysequlibrium syndrome","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium","type":"exact"},{"name":"cerebellar ataxia-intellectual disability-dysequilibrium syndrome syndrome","type":"exact"},{"name":"cerebellar disorder, nonprogressive, with mental retardation","type":"related"},{"name":"cerebellar hypoplasia, VLDLR associated","type":"related"},{"name":"dialysis dysequilibrium syndrome","type":"exact"},{"name":"dysequilibrium syndrome","type":"exact"},{"name":"non-progressive cerebellar ataxia-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0009133","terms_by_termid":{"MONDO:0014104":null},"xrefs":{"Monarch":{"xref_id":"0009133"}}}


id: GO:0034134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 2.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 2 signaling pathway","secondary_identifiers":["Reactome:R-HSA-181438"],"synonyms":[{"name":"TLR2 signaling pathway","type":"exact"},{"name":"toll-like receptor 2 signalling pathway","type":"exact"}],"termid":"GO:0034134"}


id: PBO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 9","termid":"PBO:0044037"}


id: MONDO:0043008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of multiple congenital anomalies/dysmorphic syndrome without intellectual disability that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome without intellectual disability (obsolete MONDO:0043008)","secondary_identifiers":["Orphanet:330206"],"synonyms":[{"name":"genetic MCA","type":"exact"},{"name":"genetic multiple congenital anomalies without intellectual disability (with or without dysmorphism)","type":"exact"},{"name":"hereditary multiple congenital anomalies/dysmorphic syndrome without intellectual disability","type":"exact"}],"termid":"MONDO:0043008","xrefs":{"Monarch":{"xref_id":"0043008"}}}


id: PBO:0038841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS9 antisense RNA 2","termid":"PBO:0038841"}


id: PR:Q9UTN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C139.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.03","synonyms":[{"name":"Spom972h-toe2","type":"exact"}],"termid":"PR:Q9UTN0"}


id: MONDO:1012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, horse","secondary_identifiers":["OMIA:000789-9796"],"termid":"MONDO:1012208","xrefs":{"Monarch":{"xref_id":"1012208"}}}


id: MOD:01054
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-toluenesulfonyl","synonyms":[{"name":"4-toluenesulphonyl","type":"exact"},{"name":"Tos","type":"exact"},{"name":"Tosyl","type":"exact"}],"termid":"MOD:01054"}


id: PBO:0046659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extra spindle pole bodies like 1, separase","termid":"PBO:0046659"}


id: PBO:0080195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 3","termid":"PBO:0080195"}


id: MONDO:0020144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebrovascular dementia (obsolete MONDO:0020144)","secondary_identifiers":["Orphanet:98549"],"synonyms":[{"name":"rare cerebrovascular dementia","type":"related"}],"termid":"MONDO:0020144","xrefs":{"Monarch":{"xref_id":"0020144"}}}


id: PBO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 11","termid":"PBO:0052499"}


id: PBO:0063079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 1","termid":"PBO:0063079"}


id: PBO:0071218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 59","termid":"PBO:0071218"}


id: PBO:0090003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific serine/threonine rich protein","termid":"PBO:0090003"}


id: PBO:0071038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 40","termid":"PBO:0071038"}


id: GO:0039595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA).","definition_xrefs":["PMID:17360652","PMID:12163576","PMID:22696660","PMID:16477041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated degradation of host mRNA","secondary_identifiers":["VZ:901"],"synonyms":[{"name":"induction by virus of catabolism of host mRNA","type":"exact"},{"name":"induction by virus of host mRNA catabolic process","type":"exact"},{"name":"induction of host mRNA decay","type":"exact"},{"name":"promotion of host mRNA degradation","type":"exact"},{"name":"viral induction of host mRNA decay","type":"exact"},{"name":"virus-mediated mRNA decay","type":"exact"}],"termid":"GO:0039595"}


id: MONDO:0015544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acquired hemophagocytic lymphohistiocytosis associated with malignant disease","secondary_identifiers":["GARD:20027","UMLS:C5190710","MEDGEN:1683300","Orphanet:158057"],"termid":"MONDO:0015544","xrefs":{"Monarch":{"xref_id":"0015544"}}}


id: MONDO:0011411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chudley-McCullough syndrome","secondary_identifiers":["GARD:86","OMIM:604213","MEDGEN:347699","MESH:C535459","UMLS:C1858695","Orphanet:314597"],"synonyms":[{"name":"CMCS","type":"related"},{"name":"Chudley-McCullough syndrome","type":"exact"},{"name":"deafness, autosomal recessive 82","type":"related"},{"name":"deafness, autosomal recessive 82, formerly","type":"related"},{"name":"deafness, bilateral sensorineural, and hydrocephalus due to foramen of Monro obstruction","type":"related"},{"name":"deafness, sensorineural, with partial agenesis of the corpus callosum and arachnoid cysts","type":"related"}],"termid":"MONDO:0011411","xrefs":{"Monarch":{"xref_id":"0011411"}}}


id: PBO:0074273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 14","termid":"PBO:0074273"}


id: GO:0018308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient modification of lysine by pyruvate to form N6-pyruvic acid 2-iminyl-L-lysine, found in the active site of dihydrodipicolinate synthase.","definition_xrefs":["RESID:AA0287","PMID:1463470"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine (obsolete GO:0018308)","synonyms":[{"name":"enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine","type":"exact"}],"termid":"GO:0018308"}


id: PBO:0090368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex (derlin) Der1/Dfm1","termid":"PBO:0090368"}


id: MONDO:1010644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B, non-human animal","termid":"MONDO:1010075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, domestic cat","secondary_identifiers":["OMIA:000438-9685"],"termid":"MONDO:1010644","xrefs":{"Monarch":{"xref_id":"1010644"}}}


id: PBO:0024807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to","termid":"PBO:0024807"}


id: PBO:0045103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 1 associated protein 1","termid":"PBO:0045103"}


id: PBO:0088796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone and CENP-A amino terminus domain (NTD) isomerase Ani2","termid":"PBO:0088796"}


id: MOD:00023
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-phenylalanine.","definition_xrefs":["ChEBI:29997","DeltaMass:0","PubMed:6692818","RESID:AA0014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine residue","synonyms":[{"name":"(2S)-2-amino-3-phenylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-phenylpropanoic acid","type":"exact"},{"name":"L-phenylalanine","type":"exact"},{"name":"Phe","type":"exact"},{"name":"alpha-amino-beta-phenylpropionic acid","type":"exact"}],"termid":"MOD:00023"}


id: MONDO:0020295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aberrant drainage of one or more of the pulmonary veins which causes the return of oxygen-rich blood to the right atrium.","definition_xrefs":["NCIT:C110942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital pulmonary veins anomaly","secondary_identifiers":["GARD:19559","Orphanet:98729","SCTID:111322000"],"synonyms":[{"name":"congenital anomaly of pulmonary veins","type":"exact"},{"name":"pulmonary vein abnormality","type":"related"}],"termid":"MONDO:0020295","xrefs":{"Monarch":{"xref_id":"0020295"}}}


id: PBO:0082852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coproporphyrinogen III oxidase; oxygen-requiring enzyme that catalyzes sixth step in heme biosynthetic pathway; transcription is repressed by oxygen and heme (via Rox1p and Hap1p); human homolog CPOX can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0082852"}


id: PBO:0036459
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript","termid":"PBO:0036459"}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PBO:0090940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase complex and tRNA (m2G10) methyltransferase complex regulatory subunit Trm112","termid":"PBO:0090940"}


id: PATO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000657 length_quantity (obsolete PATO:0000657)","termid":"PATO:0000657"}


id: PBO:0066126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 5","termid":"PBO:0066126"}


id: PBO:0090835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron transmembrane transporter Fip1","termid":"PBO:0090835"}


id: GO:0006474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the N-terminal amino acid of proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid modification","termid":"GO:0031365"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"N-terminal protein amino acid acetylation","synonyms":[{"name":"N(alpha)-terminal acetylation","type":"narrow"}],"termid":"GO:0006474"}


id: FYPO:0002704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic vacuole docking is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"part_of","term_name":"normal macroautophagy","termid":"FYPO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal autophagic vacuole docking","termid":"FYPO:0002704"}


id: GO:0036389
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex that forms at the bacterial oriC during the initial step of DNA replication and allows the origin to become competent, or 'licensed', for replication.","definition_xrefs":["GOC:jh2","GOC:bf","GOC:bhm","PMID:19833870","PMID:21035377","Wikipedia:Pre-replication_complex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex","termid":"GO:0036387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"bacterial pre-replicative complex","synonyms":[{"name":"bacterial pre-RC","type":"exact"}],"termid":"GO:0036389"}


id: GO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amines across synaptic vesicle membranes.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle amine transmembrane transporter activity (obsolete GO:0005430)","termid":"GO:0005430"}


id: GO:1902417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of (+)-abscisic acid D-glucopyranosyl ester from one side of a membrane to the other.","definition_xrefs":["PMID:24028845","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity","synonyms":[{"name":"ABA-GE transmembrane transporter activity","type":"exact"},{"name":"abscisic acid glucosyl ester transmembrane transporter activity","type":"exact"}],"termid":"GO:1902417"}


id: MONDO:0018881
data:
  {"annotated_genes":["SJAG_03081","SJAG_01008","SJAG_03424","SJAG_01548"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86023,86024],"is_not":false,"summary":null,"term":"MONDO:0018881"},{"annotations":[86074,86075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","definition":"A clonal hematopoietic disorder characterized by dysplasia and ineffective hematopoiesis in one or more of the hematopoietic cell lines. The dysplasia may be accompanied by an increase in myeloblasts, but the number is less than 20%, which, according to the WHO guidelines, is the requisite threshold for the diagnosis of acute myeloid leukemia. It may occur de novo or as a result of exposure to alkylating agents and/or radiotherapy. (WHO, 2001)","definition_xrefs":["NCIT:C3247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid hemopathy","termid":"MONDO:0015756"},{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01008":null,"SJAG_01548":null,"SJAG_03081":null,"SJAG_03424":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7132","NANDO:2100003","OMIM:614286","MEDGEN:483005","ICDO:9989/3","ICD9:238.7","EFO:0000198","ICD9:238.75","MedDRA:10028532","Orphanet:52688","DOID:0050908","UMLS:C3463824","ONCOTREE:MDS","NORD:1480","NANDO:2200019","SCTID:109995007"],"synonyms":[{"name":"MDS","type":"exact"},{"name":"MDS, unclassifiable","type":"exact"},{"name":"MDS-U","type":"exact"},{"name":"Myelodysplastic Syndromes","type":"exact"},{"name":"dysmyelopoietic syndrome","type":"exact"},{"name":"hematopoeitic - myelodysplastic syndrome (MDS)","type":"exact"},{"name":"myelodysplasia","type":"exact"},{"name":"myelodysplastic neoplasm","type":"exact"},{"name":"myelodysplastic syndrome","type":"exact"},{"name":"myelodysplastic syndrome, somatic","type":"exact"},{"name":"myelodysplastic syndrome, susceptibility to","type":"related"},{"name":"myelodysplastic syndrome, unclassifiable","type":"exact"},{"name":"myelodysplastic syndrome/neoplasm","type":"exact"},{"name":"myelodysplastic syndromes","type":"exact"},{"name":"oligoblastic leukaemia","type":"exact"},{"name":"oligoblastic leukemia","type":"exact"},{"name":"preleukemia","type":"exact"},{"name":"smoldering leukemia","type":"exact"},{"name":"smouldering leukaemia","type":"exact"}],"termid":"MONDO:0018881","terms_by_termid":{"MONDO:0007925":null,"MONDO:0018881":null},"xrefs":{"Monarch":{"xref_id":"0018881"}}}


id: MONDO:0001408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuropathy that is caused by inadequate blood supply.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"ischemic neuropathy","secondary_identifiers":["ICD9:356.9","NCIT:C27025","DOID:1195","UMLS:C0238309","MEDGEN:116055","SCTID:129611009"],"synonyms":[{"name":"ischaemic peripheral neuropathy","type":"exact"},{"name":"ischemic peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001408","xrefs":{"Monarch":{"xref_id":"0001408"}}}


id: PBO:0090291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex STAG protein Rec11","termid":"PBO:0090291"}


id: GO:0034928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxypyrene + O2 + 2 H+ + 2 e- = 1-hydroxypyrene-6,7-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxypyrene 6,7-monooxygenase activity (obsolete GO:0034928)","termid":"GO:0034928"}


id: PBO:0067808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 110","termid":"PBO:0067808"}


id: PBO:0046235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 29","termid":"PBO:0046235"}


id: MONDO:0010643
data:
  {"annotated_genes":["SJAG_01349","SJAG_03905","SJAG_01013","SJAG_01748","SJAG_05979","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87712,87558,87556,87711,87557,87559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"}]},"cv_name":"mondo","definition":"A clonal (malignant) hematopoietic disorder with an acute onset, affecting the bone marrow and the peripheral blood. The malignant cells show minimal differentiation and are called blasts, either myeloid blasts (myeloblasts) or lymphoid blasts (lymphoblasts).","definition_xrefs":["NCIT:C9300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acute leukemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:208.00","DOID:12603","ICDO:9801/3","UMLS:C0085669","MEDGEN:43225","NCIT:C9298","HP:0002488","EFO:1000068","ICD9:208.0","SCTID:91855006","MESH:C564112"],"synonyms":[{"name":"acute leukaemia (disease)","type":"exact"},{"name":"acute leukemia","type":"exact"},{"name":"acute leukemia (disease)","type":"exact"},{"name":"leukemia, acute, X-linked","type":"related"},{"name":"stem cell leukaemia","type":"related"},{"name":"stem cell leukaemia (disease)","type":"related"},{"name":"stem cell leukemia","type":"related"},{"name":"stem cell leukemia (disease)","type":"related"}],"termid":"MONDO:0010643","terms_by_termid":{"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0010643"}}}


id: MONDO:0020645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of osteopetrosis (disease).","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis","secondary_identifiers":["MEDGEN:1378401","OMIMPS:607634","UMLS:C4272579","NCIT:C129732"],"synonyms":[{"name":"OPTA","type":"exact"},{"name":"autosomal dominant osteopetrosis (disease)","type":"exact"},{"name":"osteopetrosis (disease), autosomal dominant","type":"exact"}],"termid":"MONDO:0020645","xrefs":{"Monarch":{"xref_id":"0020645"}}}


id: PBO:0081377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 215","termid":"PBO:0081377"}


id: PBO:0075859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 7","termid":"PBO:0075859"}


id: PBO:0055203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2628","termid":"PBO:0055203"}


id: PBO:0108707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp3","termid":"PBO:0108707"}


id: MONDO:0010616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypogonadism, male (obsolete MONDO:0010616)","termid":"MONDO:0010616","xrefs":{"Monarch":{"xref_id":"0010616"}}}


id: PBO:0017754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transmembrane transporter (predicted)","termid":"PBO:0017754"}


id: PBO:0054683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2091","termid":"PBO:0054683"}


id: FYPO:0004098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and most of the DNA remains in a single mass at or near the midpoint of the mitotic spindle, but portions of the chromosomes can separate along the spindle, resulting in the formation of a DNA mass shaped like the Greek letter phi.","definition_xrefs":["PomBase:mah","PMID:7957061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000337","FYPO:0005447"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with phi-shaped DNA mass","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with phi-shaped DNA mass, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with phi-shaped DNA mass","type":"related"},{"name":"incomplete sister chromatid segregation, with phi-shaped DNA mass during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004098"}


id: PBO:0045307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 alpha","termid":"PBO:0045307"}


id: GO:0102765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + UDP-alpha-D-glucuronate = UDP-alpha-D-apiose + carbon dioxide.","definition_xrefs":["MetaCyc:RXN-7770","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"UDP-D-apiose synthase activity","termid":"GO:0102765"}


id: FYPO:0001268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore","termid":"FYPO:0005209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during vegetative growth","synonyms":[{"name":"abnormal protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001268"}


id: PBO:0076073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 related adaptor beta","termid":"PBO:0076073"}


id: PBO:0017081
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorder of glycosylation","termid":"PBO:0017081"}


id: PBO:0086859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative S-adenosylmethionine-dependent lysine methyltransferase; responsible for modifying Lys-390 in translational elongation factor EF-1 alpha (eEF1A); has seven beta-strand methyltransferase motif; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086859"}


id: RO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a substance and a chemical entity, if the chemical entity is part of the substance, and the chemical entity forms the biologically active component of the substance.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_active_ingredient","synonyms":[{"name":"has active pharmaceutical ingredient","type":"related"},{"name":"has active substance","type":"exact"}],"termid":"RO:0002248"}


id: GO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides. Exodeoxyribonuclease V shows a preference for double-stranded DNA and possesses DNA-dependent ATPase activity. It acts endonucleolytically on single-stranded circular DNA.","definition_xrefs":["PMID:1618858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"exodeoxyribonuclease V complex","termid":"GO:0009338"}


id: PBO:0050510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C10","termid":"PBO:0050510"}


id: GO:0071421
data:
  {"annotated_genes":["SJAG_04867","SJAG_04096","SJAG_01007","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61548,64336,71163,108981],"is_not":false,"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"A process in which a manganese ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transport","termid":"GO:0006828"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"manganese ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"manganese ion membrane transport","type":"exact"},{"name":"transmembrane manganese transport","type":"exact"}],"termid":"GO:0071421","terms_by_termid":{"GO:0071421":null}}


id: GO:1903337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"positively_regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vacuolar transport","synonyms":[{"name":"activation of vacuolar transport","type":"narrow"},{"name":"up regulation of vacuolar transport","type":"exact"},{"name":"up-regulation of vacuolar transport","type":"exact"},{"name":"upregulation of vacuolar transport","type":"exact"}],"termid":"GO:1903337"}


id: MONDO:0015197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sinus of Valsalva aneurysm (SVA) is a rare congenital heart malformation of one or more of the aortic sinuses, consisting of a dilation that when unruptured is usually asymptomatic but when ruptured presents with progressive exertional dyspnea, fatigue, chest pain and that can lead to congestive heart failure if left untreated.","definition_xrefs":["Orphanet:1054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysm of sinus of Valsalva","secondary_identifiers":["ICD9:747.29","NANDO:2200293","SCTID:54160000","GARD:670","UMLS:C2239253","MEDGEN:853730","icd11.foundation:364348641"],"synonyms":[{"name":"SVA","type":"related"},{"name":"sinus of Valsalva aneurysm","type":"related"}],"termid":"MONDO:0015197","xrefs":{"Monarch":{"xref_id":"0015197"}}}


id: PBO:0000285
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad2-dependent checkpoint response","termid":"PBO:0000285"}


id: GO:0018113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine = D-lysine.","definition_xrefs":["EC:5.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"lysine racemase activity","secondary_identifiers":["MetaCyc:LYSINE-RACEMASE-RXN","RHEA:22864"],"termid":"GO:0018113"}


id: GO:0047186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + acetyl-CoA = CMP-N-acetyl-9-O-acetyl-beta-neuraminate + CoA.","definition_xrefs":["EC:2.3.1.45","RHEA:81827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"N-acetylneuraminate 9-O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.45-RXN"],"synonyms":[{"name":"N-acetylneuraminate 7(8)-O-acetyltransferase activity","type":"related"},{"name":"N-acetylneuraminate 7,8-O-acetyltransferase activity","type":"related"},{"name":"N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity","type":"exact"},{"name":"N-acetylneuraminate O7-(or O9-)acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate 7-O(or 9-O)-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-7- and/or 8-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-7- or 8-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-9(7)-O-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:N-acetylneuraminate-9(or 7)-O-acetyltransferase activity","type":"related"},{"name":"glycoprotein 7(9)-O-acetyltransferase activity","type":"related"},{"name":"sialate O-acetyltransferase","type":"broad"}],"termid":"GO:0047186"}


id: MONDO:1012715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in domestic cats with a XY karyotype.","definition_xrefs":["OMIA:001601-9685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, domestic cat","termid":"MONDO:1012715","xrefs":{"Monarch":{"xref_id":"1012715"}}}


id: GO:0047958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + 2-oxoglutarate = glyoxylate + L-glutamate.","definition_xrefs":["MetaCyc:GLYCINE-AMINOTRANSFERASE-RXN","EC:2.6.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"glycine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["RHEA:14089"],"synonyms":[{"name":"L-glutamate:glyoxylate aminotransferase activity","type":"exact"},{"name":"glutamate-glyoxylate transaminase activity","type":"exact"},{"name":"glutamic-glyoxylic transaminase activity","type":"related"},{"name":"glycine aminotransferase activity","type":"broad"},{"name":"glycine transaminase activity","type":"broad"},{"name":"glyoxylate-glutamate aminotransferase activity","type":"related"},{"name":"glyoxylate-glutamic transaminase activity","type":"related"}],"termid":"GO:0047958"}


id: GO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide linkages in oligopeptides or polypeptides by a reaction mechanism in which arginine or lysine residues act as nucleophiles.","definition_xrefs":["GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine/lysine endopeptidase activity (obsolete GO:0010320)","synonyms":[{"name":"arginine/lysine endopeptidase activity","type":"exact"}],"termid":"GO:0010320"}


id: PBO:0058391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4763","termid":"PBO:0058391"}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: GO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification, in which the cell wall is reinforced and made thicker, that occurs as part of the defense response of an organism.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"defense response by cell wall thickening","synonyms":[{"name":"cell wall thickening during defense response","type":"related"}],"termid":"GO:0052482"}


id: PBO:0029548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_meiosis_gene_mRNA_during_vegetative_growth","termid":"PBO:0029548"}


id: MONDO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the transverse colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"transverse colon cancer","secondary_identifiers":["ICD9:153.1","DOID:261","SCTID:363408006","UMLS:C0153434","MEDGEN:509290"],"synonyms":[{"name":"Ca transverse colon","type":"exact"},{"name":"cancer of transverse colon","type":"exact"},{"name":"malignant neoplasm of transverse colon","type":"exact"},{"name":"malignant transverse colon neoplasm","type":"exact"},{"name":"malignant tumor of transverse colon","type":"exact"},{"name":"malignant tumour of transverse colon","type":"exact"},{"name":"transverse colon cancer","type":"exact"}],"termid":"MONDO:0002361","xrefs":{"Monarch":{"xref_id":"0002361"}}}


id: PBO:0074575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 31","termid":"PBO:0074575"}


id: GO:0090144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the mitochondrial nucleoid. The mitochondrial nucleoid is the region of a mitochondrion to which the DNA is confined.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid organization","termid":"GO:0090143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial nucleoid organization","synonyms":[{"name":"mitochondrial nucleoid organisation","type":"exact"}],"termid":"GO:0090144"}


id: MONDO:0021351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the neck.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of neck","secondary_identifiers":["NCIT:C3260","MEDGEN:10279","SCTID:126635000","ICD9:239.89","UMLS:C0027533"],"synonyms":[{"name":"neck neoplasm","type":"exact"},{"name":"neck neoplasm (disease)","type":"exact"},{"name":"neck neoplasms (Including All pharyngeal related neoplasms)","type":"exact"},{"name":"neck tumor","type":"exact"},{"name":"neck tumour","type":"exact"},{"name":"neoplasm of neck","type":"exact"},{"name":"neoplasm of the neck","type":"exact"},{"name":"tumor of neck","type":"exact"},{"name":"tumor of the neck","type":"exact"},{"name":"tumour of neck","type":"exact"},{"name":"tumour of the neck","type":"exact"}],"termid":"MONDO:0021351","xrefs":{"Monarch":{"xref_id":"0021351"}}}


id: PBO:0071015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 17","termid":"PBO:0071015"}


id: PBO:0055115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2534","termid":"PBO:0055115"}


id: PBO:0040213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 1","termid":"PBO:0040213"}


id: PBO:0059709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 17","termid":"PBO:0059709"}


id: PBO:0031876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic cohesin-associated protein Pds5","termid":"PBO:0031876"}


id: GO:0031445
data:
  {"annotated_genes":["SJAG_02990","SJAG_01867","SJAG_03624","SJAG_02342","SJAG_02381","SJAG_01599","SJAG_03664","SJAG_02622","SJAG_01511","SJAG_03255","SJAG_02723","SJAG_04369","SJAG_00142","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91152,98893],"is_not":false,"summary":null,"term":"GO:0031445"},{"annotations":[106970,77632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[99289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[91524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[91525,94710,110656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[97516,100624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[118053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[118054,92203,97517,100625,118417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of heterochromatin formation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"regulates","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"regulation of heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of heterochromatin assembly","type":"exact"}],"termid":"GO:0031445","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:1902801":null}}


id: PBO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1","termid":"PBO:0047973"}


id: PBO:0062819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast associated Ig-like receptor","termid":"PBO:0062819"}


id: MONDO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelium that lines the cavity of the uterine body. The vast majority of endometrial carcinomas are adenocarcinomas; squamous cell and adenosquamous carcinomas represent a minority of the cases. Endometrioid adenocarcinoma is the most frequently seen variant of endometrial adenocarcinoma. Uterine bleeding is an initial clinical sign. The prognosis depends on the stage of the tumor, the depth of myometrial wall invasion, and the degree of differentiation.","definition_xrefs":["NCIT:C7558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"endometrial cancer","termid":"MONDO:0011962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial carcinoma","secondary_identifiers":["icd11.foundation:1123821211","HP:0012114","MEDGEN:96903","ONCOTREE:UCEC","UMLS:C0476089","DOID:2871","EFO:1001512","SCTID:254878006"],"synonyms":[{"name":"carcinoma of endometrium","type":"exact"},{"name":"carcinoma of the endometrium","type":"exact"},{"name":"carcinoma, endometrial, malignant","type":"exact"},{"name":"endometrial cancer","type":"broad"},{"name":"endometrial carcinoma","type":"exact"},{"name":"endometrial carcinoma (disease)","type":"exact"},{"name":"endometrium carcinoma","type":"exact"}],"termid":"MONDO:0002447","xrefs":{"Monarch":{"xref_id":"0002447"}}}


id: PR:O74971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An autophagy protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03703","PANTHER:PTHR13040:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.10c","secondary_identifiers":["UniProtKB:O74971"],"synonyms":[{"name":"Spom972h-ATG5","type":"exact"},{"name":"meiotically up-regulated gene 77 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74971"}


id: MONDO:0017117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital non-communicating hydrocephalus","secondary_identifiers":["GARD:17272","MEDGEN:1616373","SCTID:762295002","Orphanet:269510","UMLS:C4546092"],"synonyms":[{"name":"congenital obstructive hydrocephalus","type":"exact"}],"termid":"MONDO:0017117","xrefs":{"Monarch":{"xref_id":"0017117"}}}


id: PATO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer flowing or coming together with another entity.","definition_xrefs":["Merriam-Webster:confluent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confluent with","termid":"PATO:0002512"}


id: PR:O42875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tryptophan--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10055:SF2","OMA:SCHPO01319","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.13c","secondary_identifiers":["UniProtKB:O42875"],"synonyms":[{"name":"Spom972h-WARS2","type":"exact"},{"name":"TrpRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tryptophanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42875"}


id: PBO:0041926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromobox 1 pseudogene 1","termid":"PBO:0041926"}


id: GO:0061518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a microglial cell population by cell division.","definition_xrefs":["PMID:17344397","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell proliferation","termid":"GO:0014009"},{"relation_name":"is_a","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell proliferation","termid":"GO:0061518"}


id: PBO:0003251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein Vac8 (predicted)","termid":"PBO:0003251"}


id: PBO:0086843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative purine-cytosine permease; very similar to Fcy2p but cannot substitute for its function","termid":"PBO:0086843"}


id: MONDO:0958009
data:
  {"annotated_genes":["SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86434],"is_not":false,"summary":null,"term":"MONDO:0958009"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00721":null},"genotype_count":0,"is_obsolete":false,"name":"spastic ataxia 10, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1851662","OMIM:620666","UMLS:C5882738"],"termid":"MONDO:0958009","terms_by_termid":{"MONDO:0958009":null},"xrefs":{"Monarch":{"xref_id":"0958009"}}}


id: PBO:0034680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_meiosis_I","termid":"PBO:0034680"}


id: PR:Q10449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug157 gene.","definition_xrefs":["UniProtKB:Q10449","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 157 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.16c","synonyms":[{"name":"Spom972h-mug157","type":"exact"}],"termid":"PR:Q10449"}


id: PBO:0087529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4, an essential histone H4/H2A acetyltransferase complex; conserved region at N-terminus is essential for interaction with the NPC (nucleosome core particle); required for autophagy; homologous to Drosophila Enhancer of Polycomb; coding sequence contains length polymorphisms in different strains","termid":"PBO:0087529"}


id: GO:0014720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within tonic skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The tonic skeletal muscle is characterized by long lasting contractile responses and high resistance to fatigue.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tonic skeletal muscle contraction","termid":"GO:0014720"}


id: PBO:0075174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 4","termid":"PBO:0075174"}


id: GO:0050207
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:1-(1,2-saturated alkyl)-2-acyl-sn-glycero-3-phosphoethanolamine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = 1-O-(1Z-alkenyl)-2-acyl-sn-glycero-3-phosphoethanolamine + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:22956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"plasmanylethanolamine desaturase activity","secondary_identifiers":["EC:1.14.19.77","MetaCyc:RXN-17732"],"synonyms":[{"name":"2-acyl-1-alkyl-sn-glycero-3-phosphoethanolamine desaturase activity","type":"related"},{"name":"alkylacylglycero-phosphorylethanolamine dehydrogenase activity","type":"related"},{"name":"alkylacylglycerophosphoethanolamine desaturase activity","type":"related"},{"name":"plasmenylethanolamine desaturase activity","type":"exact"}],"termid":"GO:0050207"}


id: FYPO:0005755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of (1->3)-beta-D-glucan measured in the periplasmic space is greater than normal.","definition_xrefs":["PomBase:mah","PMID:11514435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased (1->3)-beta-D-glucan level","termid":"FYPO:0007949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased (1->3)-beta-D-glucan level in periplasmic space","synonyms":[{"name":"increased (1,3)beta-D-glucan level in periplasmic space","type":"exact"},{"name":"increased (1->3)-beta-D-glucan accumulation in periplasmic space","type":"related"},{"name":"increased (1->3)-beta-D-glucan level in periplasmic space during mitotic cell cycle","type":"related"},{"name":"increased (1->3)-beta-D-glucan level in periplasmic space during vegetative growth","type":"exact"},{"name":"increased 1,3-beta-D-glucan level in periplasmic space","type":"exact"},{"name":"increased level of (1->3)-beta-D-glucan in periplasmic space","type":"exact"}],"termid":"FYPO:0005755"}


id: GO:0086092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cardiac conduction process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"},{"relation_name":"is_a","term_name":"cardiac conduction","termid":"GO:0061337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction by cardiac conduction","termid":"GO:0086092"}


id: PBO:0059553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Thr (ACN)","termid":"PBO:0059553"}


id: PBO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 21","termid":"PBO:0071362"}


id: PBO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mi","termid":"PBO:0005869"}


id: PR:O13722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- taf12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.02","synonyms":[{"name":"Spom972h-taf12","type":"exact"},{"name":"TBP-associated factor 12 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13722"}


id: PBO:0060386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocardial zonula adherens protein","termid":"PBO:0060386"}


id: PBO:0017739
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolff-Parkinson-White syndrome","termid":"PBO:0017739"}


id: MONDO:0009684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular hypertonia, lethal","secondary_identifiers":["OMIM:254120","UMLS:C1850827","MEDGEN:342600","MESH:C564982"],"synonyms":[{"name":"muscular hypertonia, lethal","type":"exact"}],"termid":"MONDO:0009684","xrefs":{"Monarch":{"xref_id":"0009684"}}}


id: PBO:0090470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly and transfer protein Isa2","termid":"PBO:0090470"}


id: PBO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-galactosyltransferase Gmh4","termid":"PBO:0090214"}


id: PBO:0116304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP transcriptional activator of amino acid biosynthetic genes; activator responds to amino acid starvation; expression is tightly regulated at both the transcriptional and translational levels; contains four upstream open reading frames (uORFs) in 5' untranslated region which regulate translation; participates in sulfur starvation-induced autophagy along with Met4p, but is dispensable","termid":"PBO:0116304"}


id: PBO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chroamtid cohesion","termid":"PBO:0002623"}


id: PR:Q09777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgs1 gene.","definition_xrefs":["UniProtKB:Q09777","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G-protein signaling 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.12c","synonyms":[{"name":"Spom972h-rgs1","type":"exact"}],"termid":"PR:Q09777"}


id: MONDO:1010067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omphalocele that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, non-human animal","secondary_identifiers":["OMIA:000741"],"termid":"MONDO:1010067","xrefs":{"Monarch":{"xref_id":"1010067"}}}


id: MONDO:0003295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by the presence of numerous small benign smooth muscle neoplasms located throughout the body.","definition_xrefs":["NCIT:C3748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomyomatosis","secondary_identifiers":["ICDO:8890/1","DOID:5138","MESH:D018231","UMLS:C0206654","MEDGEN:60203"],"synonyms":[{"name":"leiomyomatosis","type":"exact"},{"name":"leiomyomatosis, no ICD-O subtype","type":"exact"},{"name":"leiomyomatosis, no ICD-O subtype (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003295","xrefs":{"Monarch":{"xref_id":"0003295"}}}


id: MONDO:0012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 3","secondary_identifiers":["UMLS:C1864946","OMIM:609985","MEDGEN:400645"],"synonyms":[{"name":"Pand3","type":"related"},{"name":"panic disorder 3","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 4Q-related","type":"related"},{"name":"panic disorder type 3","type":"exact"}],"termid":"MONDO:0012384","xrefs":{"Monarch":{"xref_id":"0012384"}}}


id: PBO:0112852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin, Mug174","termid":"PBO:0112852"}


id: PBO:0072746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7 pseudogene 2","termid":"PBO:0072746"}


id: MONDO:0700016
data:
  {"annotated_genes":["SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 9 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00112":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700016","terms_by_termid":{"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0700016"}}}


id: PBO:0046012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 7","termid":"PBO:0046012"}


id: GO:0000940
data:
  {"annotated_genes":["SJAG_05220","SJAG_00794","SJAG_02731","SJAG_04076","SJAG_02761","SJAG_01775","SJAG_01224","SJAG_01082","SJAG_05319","SJAG_01211","SJAG_01371","SJAG_02814","SJAG_03540","SJAG_02346","SJAG_03437","SJAG_01228","SJAG_00418","SJAG_03220","SJAG_03327","SJAG_00918","SJAG_05266","SJAG_04259","SJAG_03683"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100697,114797,118954],"is_not":false,"summary":null,"term":"GO:0000940"},{"annotations":[76814,75299,79959,63738,117211,68608,100838,60761,62645,63805],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[101652,114082],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[80170,60396,70229,74755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000444"},{"annotations":[76157,76084,75346,77522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"}]},"cv_name":"cellular_component","definition":"The region of a kinetochore most external to centromeric DNA; this outer region mediates kinetochore-microtubule interactions.","definition_xrefs":["GOC:clt","PMID:11483983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000776"}],"interesting_parent_ids":["GO:0005694","GO:0000776","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"outer kinetochore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000942"],"synonyms":[{"name":"condensed chromosome outer kinetochore","type":"exact"},{"name":"condensed nuclear chromosome outer kinetochore","type":"exact"},{"name":"outer kinetochore of condensed chromosome","type":"exact"},{"name":"outer kinetochore of condensed nuclear chromosome","type":"exact"},{"name":"outer kinetochore plate","type":"narrow"}],"termid":"GO:0000940","terms_by_termid":{"GO:0000444":null,"GO:0000940":null,"GO:0031262":null,"GO:0042729":null,"GO:0180019":null}}


id: PBO:0087051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24A; not essential for translation but may be required for normal translation rate; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24A has a paralog, RPL24B, that arose from the whole genome duplication","termid":"PBO:0087051"}


id: SO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_oligo","synonyms":[{"name":"double stranded oligonucleotide","type":"exact"},{"name":"ds oligo","type":"exact"},{"name":"ds-oligonucleotide","type":"exact"}],"termid":"SO:0000442"}


id: PBO:0028590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_growth","termid":"PBO:0028590"}


id: GO:0071531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a Rel homology domain (RHD) interaction.","definition_xrefs":["InterPro:IPR011539","GOC:amm"],"gene_count":0,"genotype_count":0,"name":"obsolete Rel homology domain-mediated complex assembly (obsolete GO:0071531)","synonyms":[{"name":"RHD domain-mediated complex assembly","type":"exact"}],"termid":"GO:0071531"}


id: PBO:0076012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1 pseudogene 3","termid":"PBO:0076012"}


id: PR:000050512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that lacks phosphorylation at the position equivalent to Ser-412 and that has been phosphorylated at the position equivalent to Ser-450 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:33888556","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos:(S450),UnPhos(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:2","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, PR:000026291|Ser-450, MOD:00046","type":"narrow"},{"name":"rec8/Phos:(S450),UnPhos(S412)","type":"exact"}],"termid":"PR:000050512"}


id: PBO:0066319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabenosyn, RAB effector","termid":"PBO:0066319"}


id: PBO:0040196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 9","termid":"PBO:0040196"}


id: PBO:0091545
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.4410192delG","termid":"PBO:0091545"}


id: PBO:0062266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily G member 1 pseudogene","termid":"PBO:0062266"}


id: GO:0050735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"},{"relation_name":"is_a","term_name":"malonyltransferase activity","termid":"GO:0016420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-malonyltransferase activity","termid":"GO:0050735"}


id: GO:0046880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"regulation of FSH secretion","type":"exact"},{"name":"regulation of follicle stimulating hormone secretion","type":"exact"}],"termid":"GO:0046880"}


id: FYPO:0003390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the medial cortex is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to medial cortex during vegetative growth","synonyms":[{"name":"ectopic protein localization to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalised to medial cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to medial cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003390"}


id: FYPO:0000835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level","termid":"FYPO:0000834"},{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level","synonyms":[{"name":"decreased protein accumulation","type":"related"},{"name":"protein/peptide accumulation: decreased","type":"related"},{"name":"reduced protein level","type":"exact"}],"termid":"FYPO:0000835"}


id: PBO:0058288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4663","termid":"PBO:0058288"}


id: GO:0016461
data:
  {"annotated_genes":["SJAG_04901","SJAG_04781","SJAG_04001","SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97197,95702,103567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045160"},{"annotations":[108444,116475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031475"}]},"cv_name":"cellular_component","definition":"A portmanteau term for myosins other than myosin II.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"unconventional myosin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0005860"],"synonyms":[{"name":"non-muscle myosin","type":"related"}],"termid":"GO:0016461","terms_by_termid":{"GO:0031475":null,"GO:0045160":null}}


id: MONDO:0011713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atypical multiple mole melanoma syndrome","termid":"MONDO:0018453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma-pancreatic cancer syndrome","secondary_identifiers":["OMIM:606719","UMLS:C1838547","MESH:C563985","GARD:18473","MEDGEN:325450","NCIT:C176904"],"synonyms":[{"name":"familial atypical multiple Mole melanoma-pancreatic carcinoma syndrome","type":"related"},{"name":"melanoma-pancreatic cancer syndrome","type":"exact"}],"termid":"MONDO:0011713","xrefs":{"Monarch":{"xref_id":"0011713"}}}


id: PBO:0057678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1268b","termid":"PBO:0057678"}


id: PBO:0079930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocanate hydratase 1","termid":"PBO:0079930"}


id: PR:O94586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hnt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hit family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.14c","synonyms":[{"name":"Spom972h-hnt1","type":"exact"},{"name":"adenosine 5'-monophosphoramidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94586"}


id: PBO:0031135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_osmotic_stress","termid":"PBO:0031135"}


id: PBO:0003478
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MRRF","termid":"PBO:0003478"}


id: PBO:0062902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation resistance 1","termid":"PBO:0062902"}


id: GO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of antigen samples carried out by M cells in the mucosal-associated lymphoid tissue.","definition_xrefs":["PMID:11896763","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen sampling in mucosal-associated lymphoid tissue","termid":"GO:0002404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen sampling by M cells in mucosal-associated lymphoid tissue","synonyms":[{"name":"antigen sampling by M cells in MALT","type":"exact"}],"termid":"GO:0002406"}


id: FYPO:0004151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of pyridoxine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular pyridoxine level","synonyms":[{"name":"decreased cellular pyridoxine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular pyridoxine level during vegetative growth","type":"exact"},{"name":"decreased pyridoxine accumulation","type":"related"},{"name":"reduced cellular pyridoxine level","type":"exact"}],"termid":"FYPO:0004151"}


id: MONDO:0014090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A6","secondary_identifiers":["UMLS:C3808889","MEDGEN:815219","GARD:18176","OMIM:615226"],"synonyms":[{"name":"PAPA6","type":"related"},{"name":"polydactyly, postaxial, type A6","type":"exact"}],"termid":"MONDO:0014090","xrefs":{"Monarch":{"xref_id":"0014090"}}}


id: PBO:0073297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 19","termid":"PBO:0073297"}


id: PBO:0032702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation","termid":"PBO:0032702"}


id: PBO:0085034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noncatalytic subunit of a tRNA methyltransferase complex; Trm8p and Trm82p comprise an enzyme that catalyzes a methyl-transfer from S-adenosyl-l-methionine to the N(7) atom of guanine at position 46 in tRNA; Trm8 lacks catalytic activity if not bound to Trm82p; relocalizes to the cytosol in response to hypoxia; mutation in human ortholog WDR4 causes microcephalic primordial dwarfism","termid":"PBO:0085034"}


id: MONDO:1010068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, non-human animal","secondary_identifiers":["OMIA:001102"],"termid":"MONDO:1010068","xrefs":{"Monarch":{"xref_id":"1010068"}}}


id: MONDO:0017655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive epilepsy and/or ataxia with myoclonus as a major feature (obsolete MONDO:0017655)","secondary_identifiers":["Orphanet:306762"],"termid":"MONDO:0017655","xrefs":{"Monarch":{"xref_id":"0017655"}}}


id: PBO:0063644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 1","termid":"PBO:0063644"}


id: PBO:0064732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 68","termid":"PBO:0064732"}


id: PBO:0069520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 789, pseudogene","termid":"PBO:0069520"}


id: PBO:0076408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 5","termid":"PBO:0076408"}


id: PBO:0046764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 4","termid":"PBO:0046764"}


id: FYPO:0006438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA molecules corresponding to alkylation damage repair intermediates are absent from the cell during DNA replication.","definition_xrefs":["PomBase:mah","PMID:23071723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"alkylation damage repair intermediates absent","synonyms":[{"name":"alkylation damage repair intermediates absent during mitotic cell cycle","type":"related"},{"name":"alkylation damage repair intermediates absent during vegetative growth","type":"exact"}],"termid":"FYPO:0006438"}


id: PBO:0053902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1192","termid":"PBO:0053902"}


id: MONDO:0005410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute graft vs. host disease (obsolete MONDO:0005410)","termid":"MONDO:0005410","xrefs":{"Monarch":{"xref_id":"0005410"}}}


id: FYPO:0005911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination begins later than normal.","definition_xrefs":["PMID:19023408","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of meiotic recombination double-strand break repair","synonyms":[{"name":"delayed meiotic recombination double-strand break repair","type":"exact"},{"name":"delayed onset of DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair during meiotic recombination","type":"exact"},{"name":"delayed onset of double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"delayed onset of meiotic DNA double-strand break repair","type":"exact"}],"termid":"FYPO:0005911"}


id: MONDO:1010693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, sheep","secondary_identifiers":["OMIA:000038-9940"],"termid":"MONDO:1010693","xrefs":{"Monarch":{"xref_id":"1010693"}}}


id: GO:1901075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["GO:kmv","PMID:19402756","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic cell clearance","termid":"GO:2000426"},{"relation_name":"negatively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of engulfment of apoptotic cell","synonyms":[{"name":"down regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down regulation of engulfment of cell corpse","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down-regulation of engulfment of cell corpse","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"downregulation of engulfment of cell corpse","type":"exact"},{"name":"inhibition of engulfment of apoptotic cell","type":"narrow"},{"name":"inhibition of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"inhibition of engulfment of cell corpse","type":"narrow"},{"name":"negative regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"negative regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901075"}


id: MONDO:0016256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hennekam syndrome is characterized by the association of lymphoedema, intestinal lymphangiectasia, intellectual deficit and facial dysmorphism.","definition_xrefs":["Orphanet:2136"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Hennekam syndrome","secondary_identifiers":["SCTID:234146006","UMLS:C0340834","DOID:0060366","GARD:3318","ICD9:457.1","MEDGEN:137946","OMIMPS:235510"],"synonyms":[{"name":"Hennekam lymphangiectasia lymphedema syndrome","type":"exact"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome","type":"exact"},{"name":"intestinal lymphagiectasia lymphedema intellectual deficit syndrome","type":"related"},{"name":"lymphangiectasies and lymphedema Hennekam type","type":"related"},{"name":"lymphedem-lymphangiectasia-intellectual disability syndrome","type":"exact"},{"name":"lymphedema-lymphangiectasia-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0016256","xrefs":{"Monarch":{"xref_id":"0016256"}}}


id: PBO:0091259
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae CLA4","termid":"PBO:0091259"}


id: GO:0051129
data:
  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biogenesis","type":"related"}],"termid":"GO:0051129","terms_by_termid":{"GO:0007094":null,"GO:0010637":null,"GO:0031030":null,"GO:0034316":null,"GO:0045128":null,"GO:0045806":null,"GO:0045875":null,"GO:0051016":null,"GO:0051598":null,"GO:0060906":null,"GO:0061188":null,"GO:0061192":null,"GO:0090258":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1903500":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905560":null,"GO:1905757":null,"GO:2000432":null,"GO:2000816":null}}


id: GO:0005015
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRKB receptor activity (obsolete GO:0005015)","synonyms":[{"name":"neurotrophin TRKB receptor activity","type":"exact"}],"termid":"GO:0005015"}


id: PBO:0077070
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thy-1 cell surface antigen","termid":"PBO:0077070"}


id: GO:0008934
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  {"annotated_genes":["SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77623],"is_not":false,"summary":null,"term":"GO:0008934"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1-phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["RHEA:27670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol monophosphate phosphatase activity","termid":"GO:0052834"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"inositol monophosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1855154","MetaCyc:RXN0-5408"],"synonyms":[{"name":"L-myo-inositol-1-phosphate phosphatase activity","type":"related"},{"name":"inositol 1-phosphatase activity","type":"related"},{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol 1-phosphatase activity","type":"related"},{"name":"myo-inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"},{"name":"myo-inositol-1-phosphatase activity","type":"related"}],"termid":"GO:0008934","terms_by_termid":{"GO:0008934":null}}


id: PBO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit/TATA-binding protein associated factor/transcription factor TFIID complex subunit Taf5","termid":"PBO:0005223"}


id: PBO:0113069
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1-70K, which has been linked to several types of autoimmune and neurodegenerative diseases","termid":"PBO:0113069"}


id: FYPO:0004766
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from one or both of the normal nucleation sites does not occur during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","GO:0051415","PMID:15772152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoplasmic interphase microtubule nucleation","termid":"FYPO:0000234"},{"relation_name":"is_a","term_name":"abolished cytoplasmic microtubule nucleation","termid":"FYPO:0005693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cytoplasmic interphase microtubule nucleation","synonyms":[{"name":"abolished cytoplasmic interphase microtubule nucleation during mitotic cell cycle","type":"exact"},{"name":"abolished cytoplasmic interphase microtubule nucleation during vegetative growth","type":"exact"},{"name":"abolished cytoplasmic microtubule nucleation during mitotic interphase","type":"exact"},{"name":"abolished interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"abolished interphase microtubule nucleation","type":"exact"},{"name":"cytoplasmic microtubule nucleation during mitotic interphase abolished","type":"exact"}],"termid":"FYPO:0004766"}


id: MONDO:0020507
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  {"annotated_genes":["SJAG_03678"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86684],"is_not":false,"summary":null,"term":"MONDO:0020507"}]},"cv_name":"mondo","definition":"Any leukoencephalopathy with vanishing white matter in which the cause of the disease is a variation in the EIF2B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy with vanishing white matter","termid":"MONDO:0800448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03678":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukoencephalopathy with vanishing white matter 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16919","MEDGEN:1830482","OMIM:603896","DOID:0070374","UMLS:C5779972","Orphanet:99854"],"synonyms":[{"name":"CACH","type":"exact"},{"name":"Cree leukoencephalopathy","type":"related"},{"name":"childhood ataxia with central nervous system hypomyelinization","type":"exact"},{"name":"vanishing white matter leukodystrophy","type":"exact"}],"termid":"MONDO:0020507","terms_by_termid":{"MONDO:0020507":null},"xrefs":{"Monarch":{"xref_id":"0020507"}}}


id: PBO:0085093
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor, exportin; major karyopherin involved in export of proteins, RNAs, and ribosomal subunits from the nucleus","termid":"PBO:0085093"}


id: PBO:0067443
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 565, pseudogene","termid":"PBO:0067443"}


id: PBO:0089786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup155","termid":"PBO:0089786"}


id: PBO:0029750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation","termid":"PBO:0029750"}


id: MONDO:0013069
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An optic atrophy that is caused by a mutation in the TMEM126A gene.","definition_xrefs":["OMIM:612989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive optic atrophy, OPA7 type","secondary_identifiers":["Orphanet:227976","DOID:0111437","MEDGEN:414112","GARD:17143","MESH:C567833","UMLS:C2751812"],"synonyms":[{"name":"OPA7","type":"related"},{"name":"TMEM126A-related optic atrophy with or without extraocular features","type":"exact"},{"name":"optic atrophy 7","type":"exact"},{"name":"optic atrophy 7 with or without auditory neuropathy","type":"related"}],"termid":"MONDO:0013069","xrefs":{"Monarch":{"xref_id":"0013069"}}}


id: MONDO:0009447
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, split hairs, and amino aciduria","secondary_identifiers":["MEDGEN:344576","OMIM:242550","MESH:C565471","UMLS:C1855786"],"synonyms":[{"name":"ichthyosis, split hairs, and amino aciduria","type":"exact"}],"termid":"MONDO:0009447","xrefs":{"Monarch":{"xref_id":"0009447"}}}


id: GO:0035987
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an endoderm cell, a cell of the inner of the three germ layers of the embryo.","definition_xrefs":["CL:0000223","GOC:yaf","PMID:17624332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"endoderm formation","termid":"GO:0001706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell differentiation","synonyms":[{"name":"endoderm cell differentiation","type":"exact"}],"termid":"GO:0035987"}


id: GO:0047555
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  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79289],"is_not":false,"summary":null,"term":"GO:0047555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-cyclic GMP + H2O = GMP + H+.","definition_xrefs":["RHEA:16957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"3',5'-cyclic-GMP phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-74059","GO:0004116","EC:3.1.4.35","Reactome:R-HSA-4086392","MetaCyc:35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN","Reactome:R-HSA-418456"],"synonyms":[{"name":"3',5' cyclic-GMP phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-GMP 5'-nucleotidohydrolase activity","type":"related"},{"name":"cGMP phosphodiesterase activity","type":"exact"},{"name":"cGMP-PDE","type":"related"},{"name":"cGMP-specific phosphodiesterase activity","type":"exact"},{"name":"cyclic 3',5'-GMP phosphodiesterase activity","type":"related"},{"name":"cyclic GMP phosphodiesterase activity","type":"exact"},{"name":"cyclic guanosine 3',5'-monophosphate phosphodiesterase activity","type":"related"},{"name":"cyclic guanosine 3',5'-phosphate phosphodiesterase activity","type":"related"},{"name":"guanosine cyclic 3',5'-phosphate phosphodiesterase activity","type":"exact"}],"termid":"GO:0047555","terms_by_termid":{"GO:0047555":null}}


id: GO:1901659
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id: GO:0036302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrioventricular canal over time, from its formation to the mature structure. The atrioventricular canal is the part of the heart connecting the atrium to the cardiac ventricle.","definition_xrefs":["PMID:14701881","UBERON:0002087","ZFA:0001315","GOC:BHF","GOC:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular canal development","termid":"GO:0036302"}


id: GO:0019780
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier FAT10, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"FAT10 activating enzyme activity","termid":"GO:0019780"}


id: PATO:0001225
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001225 relational number (obsolete PATO:0001225)","termid":"PATO:0001225"}


id: GO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to testosterone","termid":"GO:0033574"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to testosterone stimulus","termid":"GO:0071394"}


id: PBO:0065423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB8 antisense RNA 1 (head to head)","termid":"PBO:0065423"}


id: GO:0030638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyketides, any of a diverse group of natural products synthesized via linear poly-beta-ketones, which are themselves formed by repetitive head-to-tail addition of acetyl (or substituted acetyl) units indirectly derived from acetate (or a substituted acetate) by a mechanism similar to that for fatty acid biosynthesis but without the intermediate reductive steps.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"polyketide metabolic process","synonyms":[{"name":"polyketide metabolism","type":"exact"}],"termid":"GO:0030638"}


id: GO:0047369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxy-3-methylglutarate + succinyl-CoA = 3-hydroxy-3-methyl-glutaryl-CoA + succinate.","definition_xrefs":["EC:2.8.3.13","MetaCyc:2.8.3.13-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"succinate-hydroxymethylglutarate CoA-transferase activity","secondary_identifiers":["RHEA:12284"],"synonyms":[{"name":"dicarboxyl-CoA:dicarboxylic acid coenzyme A transferase activity","type":"related"},{"name":"hydroxymethylglutarate coenzyme A-transferase activity","type":"related"},{"name":"succinate:(S)-3-hydroxy-3-methylglutarate CoA-transferase activity","type":"related"}],"termid":"GO:0047369"}


id: GO:0071430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains pre-microRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071430)","synonyms":[{"name":"pre-microRNA-containing RNP export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071430"}


id: PBO:0013130
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PseudoUridine Synthase","termid":"PBO:0013130"}


id: GO:0006638
data:
  {"annotated_genes":["SJAG_02089","SJAG_03162","SJAG_02543","SJAG_03604","SJAG_03609","SJAG_02487","SJAG_01036","SJAG_02907","SJAG_02683","SJAG_02100","SJAG_04041","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114488,112368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[74766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046461"},{"annotations":[90375,77325,71626,74908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[117884,98793,71875,92233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[90454,94016,92234,115094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving neutral lipids, lipids only soluble in solvents of very low polarity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"neutral lipid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"neutral lipid metabolism","type":"exact"}],"termid":"GO:0006638","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null,"GO:0046339":null,"GO:0046461":null}}


id: GO:0005363
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"maltose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015581"],"synonyms":[{"name":"maltose porter activity","type":"exact"}],"termid":"GO:0005363","terms_by_termid":{"GO:0005364":null}}


id: GO:0051580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of neurotransmitter uptake","synonyms":[{"name":"regulation of neurotransmitter import","type":"exact"},{"name":"regulation of neurotransmitter reuptake","type":"exact"}],"termid":"GO:0051580"}


id: FYPO:0008162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the incidence of mitotic cell cycle arrest or delay due to regulation by the mitotic S-phase DNA damage checkpoint is greater than in wild type under any specified set of conditions.","definition_xrefs":["PMID:18344406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"},{"relation_name":"is_a","term_name":"increased mitotic DNA damage checkpoint activation","termid":"FYPO:0001707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"increased activation of S-phase DNA damage checkpoint","termid":"FYPO:0008162"}


id: GO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"negatively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ascus development","termid":"GO:0075320"}


id: PBO:0063017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 5","termid":"PBO:0063017"}


id: PBO:0043608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper metabolism domain containing 1","termid":"PBO:0043608"}


id: GO:0005826
data:
  {"annotated_genes":["SJAG_04461","SJAG_02864","SJAG_03145","SJAG_04077","SJAG_01665","SJAG_00082","SJAG_03887","SJAG_02431","SJAG_00750","SJAG_04621","SJAG_03631","SJAG_01787","SJAG_00228","SJAG_00229","SJAG_03025","SJAG_03564","SJAG_03581","SJAG_02392","SJAG_00845","SJAG_04509","SJAG_01889","SJAG_01114","SJAG_04498","SJAG_03703","SJAG_02169","SJAG_02838","SJAG_00807","SJAG_03379","SJAG_00663","SJAG_04375","SJAG_00677","SJAG_02266","SJAG_05285","SJAG_00185","SJAG_01943","SJAG_04703","SJAG_03088","SJAG_02831","SJAG_03704","SJAG_02320","SJAG_03625","SJAG_02278","SJAG_02737","SJAG_00938","SJAG_01143","SJAG_04887","SJAG_04597","SJAG_03596","SJAG_00268","SJAG_03374","SJAG_00279","SJAG_01277","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119411,119412,119413,119414,119415,119813,119920],"is_not":false,"summary":null,"term":"GO:0005826"},{"annotations":[116197,101588,111067,105674,107206,88228,116113,119131,119590,94162,119592,119595,119597,91058,98611,101581,90152,75287,117937,119599,94913,92878,89665,119818,76701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110085"},{"annotations":[105465,101020,118171,109369,100854],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[96652,113663,101250,90326,118172,88612,95273,94742,91105,111109,112607,104011,97528,106522,118189,96177,109370],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[78591,80104,97974,108443,100436,117328,118173,101278,92662,107358,109371,104235,98353,98222,117234],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. In animal cells, the contractile ring is located at the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms at the mother-bud neck before mitosis.","definition_xrefs":["GOC:vw","GOC:expert_jrp","PMID:28914606","ISBN:0815316194","GOC:sgd_curators","ISBN:0805319409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile ring","termid":"GO:0070938"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_01665":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_01943":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04077":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0015629","GO:0005575","GO:0005737","GO:0070938"],"is_obsolete":false,"name":"actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"secondary_identifiers":["GO:0030480"],"synonyms":[{"name":"CAR","type":"exact"},{"name":"actomyosin ring","type":"related"},{"name":"constriction ring","type":"related"},{"name":"contractile actomyosin ring","type":"exact"},{"name":"cytokinetic ring","type":"related"}],"termid":"GO:0005826","terms_by_termid":{"GO:0005826":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: GO:1902246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cis-abienol.","definition_xrefs":["PMID:22672125","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"cis-abienol metabolic process","termid":"GO:1902244"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cis-abienol biosynthetic process","synonyms":[{"name":"cis-abienol anabolism","type":"exact"},{"name":"cis-abienol biosynthesis","type":"exact"},{"name":"cis-abienol formation","type":"exact"},{"name":"cis-abienol synthesis","type":"exact"}],"termid":"GO:1902246"}


id: GO:0051648
data:
  {"annotated_genes":["SJAG_02320","SJAG_03938","SJAG_04044","SJAG_02651","SJAG_01925","SJAG_03011","SJAG_03005","SJAG_03864","SJAG_04960","SJAG_03268","SJAG_02166","SJAG_00594","SJAG_04391","SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118041,71642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[118734],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[60327,91087,99875,118026,66289,88964,114461,102240],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[116483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"},{"annotations":[104863,105194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"Any process in which a vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02651":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03268":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04391":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"vesicle localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cytoplasmic vesicle localization","type":"exact"},{"name":"establishment and maintenance of vesicle localization","type":"exact"},{"name":"vesicle localisation","type":"exact"}],"termid":"GO:0051648","terms_by_termid":{"GO:0030050":null,"GO:0047496":null,"GO:0048205":null,"GO:0090522":null,"GO:0099022":null}}


id: GO:0018296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via O4'-(8-alpha-FAD)-L-tyrosine.","definition_xrefs":["RESID:AA0145"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via O4'-(8alpha-FAD)-L-tyrosine (obsolete GO:0018296)","termid":"GO:0018296"}


id: GO:0034963
data:
  {"annotated_genes":["SJAG_01369","SJAG_02350","SJAG_06613","SJAG_00943","SJAG_04527","SJAG_03234","SJAG_02553"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73682,110508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[102486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[91426,105093,115609,113794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"}]},"cv_name":"biological_process","definition":"Any process involved in the conversion of a primary box C/D type small RNA transcript into a mature box C/D RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D sno(s)RNA metabolic process","termid":"GO:0033967"},{"relation_name":"is_a","term_name":"sno(s)RNA processing","termid":"GO:0043144"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_01369":null,"SJAG_02350":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_04527":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box C/D sno(s)RNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNA processing","type":"narrow"},{"name":"box C/D snoRNA processing","type":"narrow"}],"termid":"GO:0034963","terms_by_termid":{"GO:0000494":null,"GO:0034965":null,"GO:0106410":null}}


id: MONDO:0018761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system cancer","termid":"MONDO:0000376"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"SMARCA4-deficient sarcoma of thorax","secondary_identifiers":["MEDGEN:1806595","NCIT:C183115","UMLS:C5554190","DOID:0080532","Orphanet:466962","GARD:21943"],"synonyms":[{"name":"SMARCA4-deficient thoracic sarcoma","type":"exact"}],"termid":"MONDO:0018761","xrefs":{"Monarch":{"xref_id":"0018761"}}}


id: MOD:01124
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldohexosyl lysyl","termid":"MOD:01124"}


id: PBO:0113456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes oxidation of isocitrate to alpha-ketoglutarate in TCA cycle; targeted to vacuole via AP-3 pathway","termid":"PBO:0113456"}


id: GO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Zn2+ = Zn2+, probably powered by proton motive force. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"low-affinity zinc ion transmembrane transporter activity","termid":"GO:0000007"}


id: PBO:0053989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1307","termid":"PBO:0053989"}


id: MONDO:0019965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of ovarian benign neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare benign ovarian tumor (obsolete MONDO:0019965)","secondary_identifiers":["Orphanet:97293"],"synonyms":[{"name":"rare ovarian benign neoplasm","type":"exact"}],"termid":"MONDO:0019965","xrefs":{"Monarch":{"xref_id":"0019965"}}}


id: SO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"forward","termid":"SO:0001030"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward_primer","synonyms":[{"name":"DNA forward primer","type":"exact"},{"name":"forward DNA primer","type":"exact"},{"name":"forward primer","type":"exact"},{"name":"forward primer oligo","type":"exact"},{"name":"forward primer oligonucleotide","type":"exact"},{"name":"forward primer polynucleotide","type":"exact"},{"name":"forward primer sequence","type":"exact"}],"termid":"SO:0000121"}


id: FYPO:0002536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to nucleoplasm","termid":"FYPO:0002532"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydrogen peroxide","termid":"FYPO:0002533"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to mitotic spindle","termid":"FYPO:0003226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydrogen peroxide","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to H2O2","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002536"}


id: PBO:0055042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2457","termid":"PBO:0055042"}


id: PBO:0085077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear actin-related protein involved in chromatin remodeling; component of chromatin-remodeling enzyme complexes","termid":"PBO:0085077"}


id: MONDO:0017569
data:
  {"annotated_genes":["SJAG_00660","SJAG_00120","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87582,87583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"}]},"cv_name":"mondo","definition":"A rare autosomal recessive genetic disorder characterized by facial dysmorphism (down-slanting palpebral fissures, a broad flat nasal bridge and a small mouth) with a progeroid appearance, large and late-closing fontanel, cutis laxa (CL), joint hyperlaxity, athetoid movements and hyperreflexia, pre- and postnatal growth retardation, intellectual deficit and developmental delay, and corneal clouding and cataract.","definition_xrefs":["Orphanet:2962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hereditary metabolic disease with peripheral neuropathy (obsolete MONDO:0016133)","termid":"MONDO:0016133"},{"relation_name":"excluded_subClassOf","term_name":"cutis laxa","termid":"MONDO:0016175"},{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of proline metabolism","termid":"MONDO:0017355"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","termid":"MONDO:0019058"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic corneal dystrophy (obsolete MONDO:0020215)","termid":"MONDO:0020215"},{"relation_name":"excluded_subClassOf","term_name":"obsolete cataract associated with a metabolic disease (obsolete MONDO:0020228)","termid":"MONDO:0020228"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with cataract (obsolete MONDO:0020280)","termid":"MONDO:0020280"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025"],"is_obsolete":false,"name":"de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535990","PMID:18388779","DOID:0070143","SCTID:238826008","NORD:1034","MEDGEN:82794","UMLS:C0268354","GARD:49"],"synonyms":[{"name":"De Barsy syndrome","type":"exact"},{"name":"autosomal recessive cutis laxa type III","type":"related"},{"name":"corneal clouding, cutis laxa and intellectual disability","type":"related"},{"name":"corneal clouding, cutis laxa and mental retardation","type":"related"},{"name":"cutis laxa growth deficiency syndrome","type":"related"},{"name":"cutis laxa-corneal clouding-intellectual disability syndrome","type":"exact"},{"name":"progeroid syndrome of de Barsy","type":"related"},{"name":"progeroid syndrome, De Barsy type","type":"exact"},{"name":"progeroid syndrome, de Barsy type","type":"related"}],"termid":"MONDO:0017569","terms_by_termid":{"MONDO:0009053":null,"MONDO:0013755":null},"xrefs":{"Monarch":{"xref_id":"0017569"}}}


id: MONDO:0100071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiocutaneous syndromes are those in which phenotypic manifestations occur in the heart, skin, and/or hair. Variation in the genes of interest may occur in both an autosomal dominant inheritance pattern and autosomal recessive, which may lead to earlier and/or more severe phenotypic presentation.","definition_xrefs":["PMID:27933191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiocutaneous syndrome","secondary_identifiers":["MEDGEN:1843498","UMLS:C0543816"],"termid":"MONDO:0100071","xrefs":{"Monarch":{"xref_id":"0100071"}}}


id: GO:0034588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of piRNAs, Piwi-associated RNAs, a class of 24- to 30-nucleotide RNA derived from repeat or complex DNA sequence elements and processed by a Dicer-independent mechanism.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete piRNA catabolic process (obsolete GO:0034588)","synonyms":[{"name":"Piwi-associated RNA catabolic process","type":"exact"},{"name":"piRNA breakdown","type":"exact"},{"name":"piRNA catabolism","type":"exact"},{"name":"piRNA degradation","type":"exact"}],"termid":"GO:0034588"}


id: GO:0090691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that specifies plant organ primordium boundaries resulting in a restriction of organogenesis to a limited spatial domain and keeping the organ separate from surrounding tissues.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of plant organ boundary","termid":"GO:0090691"}


id: PBO:0052759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 51","termid":"PBO:0052759"}


id: GO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"}


id: GO:0034191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apolipoprotein A-I receptor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apolipoprotein receptor binding","termid":"GO:0034190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"apolipoprotein A-I receptor binding","termid":"GO:0034191"}


id: PBO:0089171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPBP4H10.18c ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089171"}


id: MONDO:0012271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mesoaxial synostotic syndactyly (MSSD) with phalangeal reduction is a novel and distinct form of non-syndromic syndactyly including complete syndactyly of the 3rd and 4th fingers with synostoses of the corresponding metacarpals and associated single phalanges, syndactyly of the 2nd and 3rd toes and 5th finger clinodactyly.","definition_xrefs":["Orphanet:157801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoaxial synostotic syndactyly with phalangeal reduction","secondary_identifiers":["GARD:10590","SCTID:724170007","MESH:C563721","MEDGEN:324459","UMLS:C1836206","OMIM:609432"],"synonyms":[{"name":"MSSD","type":"exact"},{"name":"syndactyly Malik-Percin type","type":"related"},{"name":"syndactyly mesoaxial synostotic with phalangeal reduction","type":"related"},{"name":"syndactyly type 9","type":"exact"},{"name":"syndactyly, Malik-Percin type","type":"exact"},{"name":"syndactyly, mesoaxial synostotic, with phalangeal reduction","type":"related"},{"name":"syndactyly, type 9","type":"related"}],"termid":"MONDO:0012271","xrefs":{"Monarch":{"xref_id":"0012271"}}}


id: FYPO:0006274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the localization of soluble cytosolic proteins to the vacuole lumen via the NVT pathway does not occur.","definition_xrefs":["PomBase:mah","PMID:26365378"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished protein localization to vacuole, with protein mislocalized to cytosol","termid":"FYPO:0006292"},{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization via NVT pathway","synonyms":[{"name":"abolished localization of cytosolic proteins to the vacuole via the NVT pathway","type":"exact"},{"name":"abolished protein localization by the NVT pathway","type":"exact"},{"name":"abolished protein localization from cytosol to vacuole via NVT pathway","type":"exact"},{"name":"abolished protein transport via NVT pathway","type":"related"}],"termid":"FYPO:0006274"}


id: GO:1990351
data:
  {"annotated_genes":["SJAG_MIT13","SJAG_07003","SJAG_02693","SJAG_04015","SJAG_03337","SJAG_00516","SJAG_01447","SJAG_MIT09","SJAG_00836","SJAG_01077","SJAG_04675","SJAG_00687","SJAG_01190","SJAG_02504","SJAG_02598","SJAG_04122","SJAG_00133","SJAG_03050","SJAG_MIT20","SJAG_00976","SJAG_02782","SJAG_01471","SJAG_01397","SJAG_02524","SJAG_02105","SJAG_04208","SJAG_00601","SJAG_05315","SJAG_03925","SJAG_03114","SJAG_MIT03","SJAG_07006","SJAG_07007","SJAG_02023","SJAG_03962","SJAG_05229","SJAG_00891","SJAG_01949","SJAG_MIT04","SJAG_00915","SJAG_00542","SJAG_02564","SJAG_01817","SJAG_00755","SJAG_02897","SJAG_01763","SJAG_00136","SJAG_00080","SJAG_05629","SJAG_02516","SJAG_04955","SJAG_00985","SJAG_01731","SJAG_01355","SJAG_03406","SJAG_05204","SJAG_01490","SJAG_01913","SJAG_MIT37","SJAG_MIT15","SJAG_00438","SJAG_05294","SJAG_03324","SJAG_03490","SJAG_04677","SJAG_00212","SJAG_02646"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78023,78264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[88996,93128,116566,90729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042719"},{"annotations":[96803,76105,97286,70948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990429"},{"annotations":[105402,98252,94758,102651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990531"},{"annotations":[67462,119363,65241,60043,67131,103996,119368,57295,119357,95178,116144,64005,66809,64509,108213,57853,60506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[76033,61896,119353,76187,104393,74065,113707,117982,72448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045275"},{"annotations":[72376,115758,114529,89563,119348,108597,119326,119376,114958,68199,74649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045277"},{"annotations":[100267,62011,92390,96165,90499,95983,104225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[102986,119023,60649,110180,88376,71568,96941,99239],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"},{"annotations":[74815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex facilitating transport of molecules (proteins, small molecules, nucleic acids) into, out of or within a cell, or between cells.","definition_xrefs":["GOC:bhm","PMID:15449578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":67,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00438":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00687":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00891":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01731":null,"SJAG_01763":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01949":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02504":null,"SJAG_02516":null,"SJAG_02524":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02693":null,"SJAG_02782":null,"SJAG_02897":null,"SJAG_03050":null,"SJAG_03114":null,"SJAG_03324":null,"SJAG_03337":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03925":null,"SJAG_03962":null,"SJAG_04015":null,"SJAG_04122":null,"SJAG_04208":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04955":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05294":null,"SJAG_05315":null,"SJAG_05629":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transporter complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:1990351","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0005891":null,"GO:0033573":null,"GO:0042719":null,"GO:0045259":null,"GO:0045275":null,"GO:0045277":null,"GO:1990429":null,"GO:1990531":null}}


id: PBO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.2","termid":"PBO:0002208"}


id: MONDO:0043783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse hardening of skin and subcutaneous adipose tissue, associated with minimal inflammation without fat necrosis, that typically affects critically ill preterm neonates during the first week of life.","definition_xrefs":["NCIT:C35009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sclerema neonatorum","secondary_identifiers":["icd11.foundation:1470028414","SCTID:206539008","MEDGEN:20677","MESH:D012593","UMLS:C0036415"],"synonyms":[{"name":"sclerema adiposum","type":"related"},{"name":"sclerema neonatorum","type":"exact"},{"name":"underwood's disease","type":"related"}],"termid":"MONDO:0043783","xrefs":{"Monarch":{"xref_id":"0043783"}}}


id: PBO:0079082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 3-1","termid":"PBO:0079082"}


id: PBO:0029758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_5'-adenosine_monophosphate_hydrolase_activity","termid":"PBO:0029758"}


id: PBO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD1 antisense RNA 1","termid":"PBO:0046364"}


id: PBO:0045734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F associated phosphoprotein","termid":"PBO:0045734"}


id: FYPO:0007660
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population do not divide at a uniform size, although each cell divides to form equal-size daughter cells, which then subsequently divide at an abnormal size. Within one population, some cells may be larger and others smaller than normal (i.e. compared to wild-type cells under the same conditions) upon each division.","definition_xrefs":["PomBase:jh","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variable cell size at division","termid":"FYPO:0007474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"variable cell size at division with subsequent division at abnormal size","synonyms":[{"name":"increased variability of cell size in a vegetative population, with subsequent division at abnormal size","type":"exact"},{"name":"variable cell length at entry into mitosis followed by unequal cell division","type":"exact"},{"name":"variable cell size at division with abnormal cell size homeostasis","type":"exact"},{"name":"variable cell size at division with loss of cell size homeostasis","type":"exact"},{"name":"variable cell size at division with subsequent division at abnormal size during mitotic cell cycle","type":"related"},{"name":"variable cell size at division with subsequent division at abnormal size during vegetative growth","type":"exact"},{"name":"variable vegetative cell size at division with subsequent division at abnormal size","type":"exact"}],"termid":"FYPO:0007660"}


id: PBO:0109836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase complex scaffold subunit Vid21/Eaf1","termid":"PBO:0109836"}


id: MONDO:0018561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precocious puberty that involves the female organism.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precocious puberty","termid":"MONDO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precocious puberty in female","secondary_identifiers":["MEDGEN:543449","HP:0010465","UMLS:C0271616","Orphanet:435561","GARD:21807"],"synonyms":[{"name":"female organism precocious puberty","type":"exact"},{"name":"precocious puberty of female organism","type":"exact"}],"termid":"MONDO:0018561","xrefs":{"Monarch":{"xref_id":"0018561"}}}


id: PBO:0060029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 17","termid":"PBO:0060029"}


id: GO:2000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell migration","termid":"GO:2000406"},{"relation_name":"is_a","term_name":"regulation of thymocyte migration","termid":"GO:2000410"},{"relation_name":"positively_regulates","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymocyte migration","synonyms":[{"name":"positive regulation of immature T cell migration","type":"related"},{"name":"positive regulation of immature T lymphocyte migration","type":"related"},{"name":"positive regulation of immature T-cell migration","type":"related"},{"name":"positive regulation of immature T-lymphocyte migration","type":"related"},{"name":"positive regulation of thymic lymphocyte migration","type":"exact"}],"termid":"GO:2000412"}


id: GO:0052707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway resulting in the formation of N-alpha,N-alpha,N-alpha-trimethyl-L-histidine from histidine. Histidine undergoes three methylations by a histidine-alpha-N-methyltransferase (EC:2.1.1.44) to form N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (also known as hercynine or histidine betaine).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-alpha,N-alpha,N-alpha-trimethyl-L-histidine biosynthesis from histidine (obsolete GO:0052707)","synonyms":[{"name":"hercynine biosynthesis from histidine","type":"exact"},{"name":"histidine betaine biosynthesis from histidine","type":"exact"},{"name":"histidine catabolic process to hercynine","type":"exact"},{"name":"histidine catabolism to N-alpha,N-alpha,N-alpha-trimethyl-L-histidine","type":"exact"},{"name":"histidine catabolism to hercynine","type":"exact"}],"termid":"GO:0052707"}


id: MONDO:0030864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 3","secondary_identifiers":["OMIM:619135","MEDGEN:1744611","UMLS:C5436883","GARD:16426"],"synonyms":[{"name":"RTSC3","type":"exact"},{"name":"Ritscher-Schinzel syndrome 3","type":"exact"}],"termid":"MONDO:0030864","xrefs":{"Monarch":{"xref_id":"0030864"}}}


id: PBO:0088417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tsr1","termid":"PBO:0088417"}


id: PBO:0042281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1a molecule","termid":"PBO:0042281"}


id: PBO:0071741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 39","termid":"PBO:0071741"}


id: GO:0032527
data:
  {"annotated_genes":["SJAG_03345","SJAG_03907","SJAG_00530"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73401],"is_not":false,"summary":null,"term":"GO:0032527"},{"annotations":[79448,75852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endoplasmic reticulum.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null,"SJAG_03907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein exit from endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protein exit from ER","type":"exact"},{"name":"protein export from ER","type":"exact"},{"name":"protein export from endoplasmic reticulum","type":"exact"}],"termid":"GO:0032527","terms_by_termid":{"GO:0030970":null,"GO:0032527":null}}


id: PBO:0048191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GA binding protein transcription factor subunit alpha","termid":"PBO:0048191"}


id: PBO:0054436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1832","termid":"PBO:0054436"}


id: MONDO:0011012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"African iron overload is a rare disorder described in sub-Saharan African populations and is characterized by iron overload due to excess dietary iron intake and possibly genetic factors, leading to hepatic portal fibrosis and micronodular cirrhosis.","definition_xrefs":["Orphanet:139507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemochromatosis","termid":"MONDO:0006507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"African iron overload","secondary_identifiers":["OMIM:601195","MESH:C537904","GARD:8495","DOID:0111033","icd11.foundation:869212237","MEDGEN:75649","NORD:740","SCTID:66576001","UMLS:C0268063"],"synonyms":[{"name":"African iron overload","type":"exact"},{"name":"Bantu siderosis","type":"exact"},{"name":"hereditary iron overload and African Americans","type":"related"},{"name":"iron overload in Africa","type":"exact"}],"termid":"MONDO:0011012","xrefs":{"Monarch":{"xref_id":"0011012"}}}


id: PBO:0005656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup60","termid":"PBO:0005656"}


id: GO:0071649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-C motif) ligand 5 production","termid":"GO:0071609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine (C-C motif) ligand 5 production","synonyms":[{"name":"regulation of CCL5 production","type":"exact"},{"name":"regulation of RANTES production","type":"exact"},{"name":"regulation of Regulated upon Activation, Normal T-cell Expressed, and Secreted production","type":"exact"}],"termid":"GO:0071649"}


id: PBO:0080244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 7 pseudogene","termid":"PBO:0080244"}


id: MOD:01146
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(6-FAD)-L-cystine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(6-FAD)-L-cysteine","synonyms":[{"name":"FAD","type":"related"},{"name":"S6FADCys","type":"exact"}],"termid":"MOD:01146"}


id: MONDO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extrinsic allergic alveolitis involving inflammation of the alveoli within the lung caused by hypersensitivity to the inhalation of organic dust particles derived from either the mushrooms, their spores or the compost in which the mushrooms are grown. It is usually caused by the spores of thermophilic actinomycetes.","definition_xrefs":["DOID:2708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mushroom workers' lung","secondary_identifiers":["UMLS:C0155889","SCTID:52333004","MEDGEN:102344","ICD9:495.5"],"synonyms":[{"name":"bunashimeji worker's lung","type":"narrow"},{"name":"mushroom workers lung","type":"exact"},{"name":"pholiota worker's lung","type":"narrow"},{"name":"pleurotus worker's lung","type":"narrow"},{"name":"shiitaki worker's lung","type":"narrow"},{"name":"shimeji worker's lung","type":"narrow"}],"termid":"MONDO:0005865","xrefs":{"Monarch":{"xref_id":"0005865"}}}


id: MONDO:0018137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 1 temperature sensitive oculocutaneous albinism (OCA1-TS) is an extremely rare form of OCA1 characterized by the production of temperature sensitive tyrosinase proteins leading to dark hair on the legs, arms and chest (cooler body areas) and white hair on the scalp, axilla and pubic area (warmer body areas).","definition_xrefs":["Orphanet:352737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism type 1","termid":"MONDO:0018135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005093"],"is_obsolete":false,"name":"temperature-sensitive oculocutaneous albinism type 1","secondary_identifiers":["GARD:17530","MEDGEN:337736","UMLS:C1847132"],"synonyms":[{"name":"OCA1-TS","type":"exact"},{"name":"TS OCA type 1","type":"exact"}],"termid":"MONDO:0018137","xrefs":{"Monarch":{"xref_id":"0018137"}}}


