# terms

id: PBO:0046026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2B subunit gamma","termid":"PBO:0046026"}


id: MONDO:0013783
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87029],"is_not":false,"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the ABCB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:482657","OMIM:614497","GARD:15811","UMLS:C3281027"],"synonyms":[{"name":"ABCB6 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"MCOPCB7","type":"related"},{"name":"microphthalmia, isolated, with coloboma 7","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in ABCB6","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 7","type":"exact"}],"termid":"MONDO:0013783","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0013783"}}}


id: PBO:0073124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC11 homolog B, signal peptidase complex subunit (pseudogene)","termid":"PBO:0073124"}


id: PR:O43031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.02c","synonyms":[{"name":"Spom972h-cwf28","type":"exact"},{"name":"complexed with cdc5 protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43031"}


id: GO:1902279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cholecystokinin signaling pathway that results in positive regulation of pancreatic amylase secretion.","definition_xrefs":["GOC:jc","PMID:19028687","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystokinin signaling pathway","termid":"GO:0038188"},{"relation_name":"is_a","term_name":"positive regulation of pancreatic amylase secretion","termid":"GO:1902278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","synonyms":[{"name":"CCK-induced amylase release in pancreatic cell","type":"exact"},{"name":"CCK-mediated pancreatic amylase secretion","type":"exact"},{"name":"CCK-stimulated pancreatic amylase release","type":"exact"},{"name":"activation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"narrow"},{"name":"cholecystokinin-mediated pancreatic amylase secretion","type":"exact"},{"name":"up regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"up-regulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"},{"name":"upregulation of pancreatic amylase secretion by cholecystokinin signaling pathway","type":"exact"}],"termid":"GO:1902279"}


id: PBO:0116621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1","termid":"PBO:0116621"}


id: PBO:0084416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major apurinic/apyrimidinic endonuclease; 3'-repair diesterase; involved in repair of DNA damage by oxidation and alkylating agents; also functions as a 3'-5' exonuclease to repair 7,8-dihydro-8-oxodeoxyguanosine; genetically interacts with NTG1 to maintain mitochondrial genome integrity","termid":"PBO:0084416"}


id: PR:P10505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.01c","secondary_identifiers":["UniProtKB:P10505"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC27","type":"exact"},{"name":"nuclear alteration protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear scaffold-like protein p76 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P10505"}


id: MONDO:0012416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Devriendt syndrome","secondary_identifiers":["OMIM:610136","UMLS:C1857830","MESH:C535947","MEDGEN:341860"],"synonyms":[{"name":"Devriendt syndrome","type":"exact"},{"name":"severe short stature, hyperphalangy of the index fingers, intellectual disability and facial dysmorphism","type":"related"},{"name":"severe short stature, hyperphalangy of the index fingers, mental retardation and facial dysmorphism","type":"related"}],"termid":"MONDO:0012416","xrefs":{"Monarch":{"xref_id":"0012416"}}}


id: GO:0009231
data:
  {"annotated_genes":["SJAG_02360","SJAG_01054","SJAG_02491","SJAG_04711","SJAG_00376","SJAG_00480","SJAG_00491"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60240,66119,71620,76790,78293,79066,117470],"is_not":false,"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["GOC:jl","PMID:10940330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"riboflavin biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOSYN2-PWY","Wikipedia:Riboflavin"],"synonyms":[{"name":"riboflavin anabolism","type":"exact"},{"name":"riboflavin biosynthesis","type":"exact"},{"name":"riboflavin formation","type":"exact"},{"name":"riboflavin synthesis","type":"exact"},{"name":"vitamin B2 biosynthesis","type":"exact"},{"name":"vitamin B2 biosynthetic process","type":"exact"},{"name":"vitamin G biosynthesis","type":"exact"},{"name":"vitamin G biosynthetic process","type":"exact"}],"termid":"GO:0009231","terms_by_termid":{"GO:0009231":null}}


id: PBO:0073483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin synthase 1","termid":"PBO:0073483"}


id: GO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection of B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"is_a","term_name":"B cell negative selection","termid":"GO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell negative selection","synonyms":[{"name":"central B lymphocyte negative selection","type":"exact"},{"name":"central B-cell negative selection","type":"exact"},{"name":"central B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002354"}


id: GO:1904022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24732013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor internalization","termid":"GO:0002092"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor internalization","termid":"GO:1904020"},{"relation_name":"positively_regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of G protein-coupled receptor internalization","synonyms":[{"name":"activation of G-protein coupled receptor internalization","type":"narrow"},{"name":"positive regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"up regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"up-regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"upregulation of G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:1904022"}


id: GO:0002398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class Ib protein complex. Class Ib here refers to non-classical class I molecules.","definition_xrefs":["PMID:15928680","PMID:15928678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"MHC class Ib protein complex assembly","termid":"GO:0002398"}


id: PBO:0067378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 480, pseudogene","termid":"PBO:0067378"}


id: PBO:0112842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase subunit pig-Q, Gpi1","termid":"PBO:0112842"}


id: GO:0018049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-serine amide by hydrolysis and oxidation of an interior Ser-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0096"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-serine amidation (obsolete GO:0018049)","termid":"GO:0018049"}


id: MONDO:0030037
data:
  {"annotated_genes":["SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85757],"is_not":false,"summary":null,"term":"MONDO:0030037"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0700092","MONDO:0002525","MONDO:0024322"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394372","OMIM:618879","MEDGEN:1710849"],"synonyms":[{"name":"Glycosylphosphatidylinositol Biosynthesis Defect 22","type":"exact"},{"name":"NEDHCAS","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND CEREBELLAR ATROPHY, WITH OR WITHOUT SEIZURES","type":"exact"},{"name":"neurodevelopmental disorder with hypotonia and cerebellar atrophy, with or without seizures","type":"exact"}],"termid":"MONDO:0030037","terms_by_termid":{"MONDO:0030037":null},"xrefs":{"Monarch":{"xref_id":"0030037"}}}


id: GO:0032896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexadecanoyl-CoA + 2 Fe(II)-[cytochrome b5] + O2 + 2 H(+) = (9Z)-hexadecenoyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:36931","PMID:16443825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoyl-CoA 9-desaturase activity","synonyms":[{"name":"palmitoyl-CoA delta9-desaturase activity","type":"exact"}],"termid":"GO:0032896"}


id: MONDO:1011563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroaxonal dystrophy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, non-human animal","termid":"MONDO:1011444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, horse","secondary_identifiers":["OMIA:000715-9796"],"termid":"MONDO:1011563","xrefs":{"Monarch":{"xref_id":"1011563"}}}


id: PBO:0064514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit K pseudogene 1","termid":"PBO:0064514"}


id: GO:0032581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of peroxisome organization in which assembly or arrangement of constituent parts takes place in the endoplasmic reticulum.","definition_xrefs":["GOC:mah","PMID:16717127","PMID:17646399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007031"],"is_obsolete":false,"name":"ER-dependent peroxisome organization","synonyms":[{"name":"ER-dependent peroxisome biogenesis","type":"related"},{"name":"ER-dependent peroxisome organisation","type":"exact"},{"name":"endoplasmic reticulum-dependent peroxisome organization","type":"exact"}],"termid":"GO:0032581"}


id: MONDO:0013280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma characterized by the presence of round non-lipogenic primitive mesenchymal cells and small signet ring lipoblasts within a myxoid stoma with a branching vascular pattern. This category includes hypercellular lesions with round cell morphology, formerly known as round cell liposarcoma.","definition_xrefs":["NCIT:C27781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid/round cell liposarcoma","termid":"MONDO:0020561"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid liposarcoma","secondary_identifiers":["EFO:0000613","ICD9:171.9","DOID:5363","MESH:D018208","ICDO:8852/3","OMIM:613488","SCTID:404069006","UMLS:C0206634","DOID:5709","GARD:15667","MEDGEN:104903"],"synonyms":[{"name":"Myxoliposarcoma","type":"related"},{"name":"mixed-type liposarcoma","type":"related"},{"name":"myxoid liposarcoma","type":"exact"},{"name":"myxoid liposarcoma (morphologic abnormality)","type":"exact"},{"name":"myxoid/round cell liposarcoma","type":"broad"}],"termid":"MONDO:0013280","xrefs":{"Monarch":{"xref_id":"0013280"}}}


id: PBO:0066665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 2","termid":"PBO:0066665"}


id: PBO:0041778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1 pseudogene 1","termid":"PBO:0041778"}


id: GO:0032040
data:
  {"annotated_genes":["SJAG_02024","SJAG_00943","SJAG_00245","SJAG_00657","SJAG_02662","SJAG_02372","SJAG_02377","SJAG_01907","SJAG_02681","SJAG_00538","SJAG_04033","SJAG_00945","SJAG_02025","SJAG_04224","SJAG_00772","SJAG_05187","SJAG_04069","SJAG_05186","SJAG_01764","SJAG_04424","SJAG_03569","SJAG_03654","SJAG_03028","SJAG_02287","SJAG_04908","SJAG_00294","SJAG_03410","SJAG_02530","SJAG_02046","SJAG_02350","SJAG_02702","SJAG_00253","SJAG_04475","SJAG_03156","SJAG_02300","SJAG_00838","SJAG_03252","SJAG_00744","SJAG_00572","SJAG_00879","SJAG_03341","SJAG_02608","SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61402,67028,67032,70896,71191,71196,71633,71942,72111,73051,73243,73284,73681,73842,74712,75715,75837,76001,76336,76407,76597,76902,77101,77429,77809,78443,78773,78915,79006,79514,79618,80011,80075,80528,80756,88086,89576,91568,101729,110507,110877,113844,117706],"is_not":false,"summary":null,"term":"GO:0032040"}]},"cv_name":"cellular_component","definition":"A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.","definition_xrefs":["PMID:15590835","GOC:vw","PMID:12068309","PMID:15120992","PMID:12957375","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00245":null,"SJAG_00253":null,"SJAG_00294":null,"SJAG_00538":null,"SJAG_00572":null,"SJAG_00657":null,"SJAG_00744":null,"SJAG_00772":null,"SJAG_00838":null,"SJAG_00879":null,"SJAG_00943":null,"SJAG_00945":null,"SJAG_01764":null,"SJAG_01907":null,"SJAG_02024":null,"SJAG_02025":null,"SJAG_02046":null,"SJAG_02287":null,"SJAG_02300":null,"SJAG_02350":null,"SJAG_02372":null,"SJAG_02377":null,"SJAG_02530":null,"SJAG_02608":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03569":null,"SJAG_03654":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04424":null,"SJAG_04475":null,"SJAG_04908":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0030684","GO:0032991"],"is_obsolete":false,"name":"small-subunit processome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"SSU processome","type":"exact"},{"name":"small subunit processome","type":"exact"}],"termid":"GO:0032040","terms_by_termid":{"GO:0032040":null}}


id: GO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nitric oxide, nitrogen monoxide (NO), a colorless gas only slightly soluble in water.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitric oxide metabolic process","termid":"GO:0046209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitric oxide biosynthetic process","synonyms":[{"name":"nitric oxide anabolism","type":"exact"},{"name":"nitric oxide biosynthesis","type":"exact"},{"name":"nitric oxide formation","type":"exact"},{"name":"nitric oxide synthesis","type":"exact"}],"termid":"GO:0006809"}


id: PBO:0048268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 6","termid":"PBO:0048268"}


id: PBO:0012060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose-specific flocculin Gsf2","termid":"PBO:0012060"}


id: PBO:0064005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 39","termid":"PBO:0064005"}


id: GO:0097079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: selenite(out) + H+(out) = selenite(in) + H+(in).","definition_xrefs":["GOC:mcc","PMID:20861301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"selenite:proton symporter activity","synonyms":[{"name":"selenite:H+ symporter activity","type":"exact"},{"name":"selenite:hydrogen symporter activity","type":"exact"}],"termid":"GO:0097079"}


id: MONDO:0015140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive dementia with reduction of cognitive functions. It presents the same phenotype as sporadic Alzheimer disease (AD) but has an early age of onset, usually before 60 years old.","definition_xrefs":["Orphanet:1020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial Alzheimer disease","termid":"MONDO:0100087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"early-onset autosomal dominant Alzheimer disease","secondary_identifiers":["GARD:12798"],"synonyms":[{"name":"EOFAD","type":"exact"},{"name":"early-onset familial autosomal dominant Alzheimer disease","type":"exact"},{"name":"early-onset, autosomal dominant Alzheimer disease","type":"related"}],"termid":"MONDO:0015140","xrefs":{"Monarch":{"xref_id":"0015140"}}}


id: GO:0008424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->6)]-N-acetyl-beta-D-glucosaminyl}asparagine + GDP + H+.","definition_xrefs":["EC:2.4.1.68","RHEA:12985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->6)-fucosyltransferase activity","termid":"GO:0046921"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"glycoprotein 6-alpha-L-fucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05988","Reactome:R-HSA-9696980","MetaCyc:2.4.1.68-RXN","Reactome:R-HSA-1028788"],"synonyms":[{"name":"FucT","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha(1,6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha(1->6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-(1,6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-(1->6)fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose--glycoprotein fucosyltransferase activity","type":"related"},{"name":"GDP-fucose--glycoprotein fucosyltransferase activity","type":"related"},{"name":"GDPfucose-glycoprotein fucosyltransferase activity","type":"related"},{"name":"glycoprotein fucosyltransferase activity","type":"broad"},{"name":"guanosine diphosphofucose--glycoprotein fucosyltransferase activity","type":"related"}],"termid":"GO:0008424"}


id: MONDO:0014273
data:
  {"annotated_genes":["SJAG_04917"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86012],"is_not":false,"summary":null,"term":"MONDO:0014273"}]},"cv_name":"mondo","definition":"Microcephaly-thin corpus callosum-intellectual disability syndrome is a rare, genetic, syndromic intellectual disability disease characterized by progressive postnatal microcephaly and global developmental delay, as well as moderate to profound intellectual disability, difficulty or inability to walk, pyramidal signs (including spasticity, hyperreflexia and extensor plantar response) and thin corpus callosum revealed by brain imaging. Ophthalmologic signs (including nystagmus, strabismus and abnormal retinal pigmentation), foot deformity and genital anomalies may also be associated.","definition_xrefs":["Orphanet:397951"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04917":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly-thin corpus callosum-intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081205","MEDGEN:816410","OMIM:615599","GARD:17645","UMLS:C3810080"],"synonyms":[{"name":"MRT40","type":"related"},{"name":"intellectual developmental disorder, autosomal recessive 40","type":"exact"},{"name":"intellectual disability, autosomal recessive 40","type":"related"},{"name":"intellectual disability, autosomal recessive type 40","type":"exact"},{"name":"mental retardation, autosomal recessive 40","type":"related"},{"name":"mental retardation, autosomal recessive type 40","type":"exact"},{"name":"microcephaly-thin corpus callosum-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0014273","terms_by_termid":{"MONDO:0014273":null},"xrefs":{"Monarch":{"xref_id":"0014273"}}}


id: MONDO:0024503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation arising from the digestive system. It includes neuroendocrine tumors (well-differentiated endocrine tumors or carcinoid tumors and well differentiated endocrine carcinomas) and neuroendocrine carcinomas (poorly differentiated neuroendocrine carcinomas, small cell carcinomas, and large cell neuroendocrine carcinomas).","definition_xrefs":["NCIT:C27721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"digestive system neuroendocrine neoplasm","secondary_identifiers":["Orphanet:100092","UMLS:C1333799","MEDGEN:232237","MESH:C535650","GARD:2437"],"synonyms":[{"name":"GEP tumors","type":"related"},{"name":"GEP tumours","type":"related"},{"name":"GEP-NEN","type":"related"},{"name":"GEP-NET","type":"related"},{"name":"alimentary part of gastrointestinal system NET","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine neoplasm","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumor","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumour","type":"exact"},{"name":"carcinoid tumor","type":"related"},{"name":"carcinoid tumor of digestive system","type":"exact"},{"name":"carcinoid tumour","type":"related"},{"name":"carcinoid tumour of digestive system","type":"exact"},{"name":"digestive system NET","type":"exact"},{"name":"digestive system neuroendocrine neoplasm","type":"exact"},{"name":"digestive system neuroendocrine tumor","type":"exact"},{"name":"digestive system neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"digestive system neuroendocrine tumour","type":"exact"},{"name":"gastro-enteropancreatic neuroendocrine tumor","type":"exact"},{"name":"gastro-enteropancreatic neuroendocrine tumour","type":"exact"},{"name":"gastroenteropancreatic endocrine tumor","type":"exact"},{"name":"gastroenteropancreatic endocrine tumour","type":"exact"},{"name":"gastroenteropancreatic neuroendocrine neoplasm","type":"exact"},{"name":"gastrointestinal neuroendocrine neoplasm","type":"exact"},{"name":"gastrointestinal system neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine neoplasm of alimentary part of gastrointestinal system","type":"exact"},{"name":"neuroendocrine neoplasm of digestive system","type":"exact"}],"termid":"MONDO:0024503","xrefs":{"Monarch":{"xref_id":"0024503"}}}


id: FYPO:0005845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000882"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased silent mating-type cassette histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0005845"}


id: PBO:0087696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; interacts with Spp1p and with trimethylated histone H3; phosphorylated by Cdc28p","termid":"PBO:0087696"}


id: GO:1990946
data:
  {"annotated_genes":["SJAG_01515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99017],"is_not":false,"summary":null,"term":"GO:1990946"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from meiosis I to meiosis II.","definition_xrefs":["PMID:21389117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01515":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiosis I/meiosis II transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990946","terms_by_termid":{"GO:1990946":null}}


id: PR:O14268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC7D4.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C7D4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.13c","synonyms":[{"name":"Spom972h-SPAC7D4.13c","type":"exact"}],"termid":"PR:O14268"}


id: PBO:0072846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 1","termid":"PBO:0072846"}


id: FYECO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that specifies one or more chemical(s) that are added to, or excluded from, growth medium, assay buffer, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical added or excluded","secondary_identifiers":["FYECO:0000017","FYECO:0000020","FYECO:0000019"],"synonyms":[{"name":"chemical added","type":"related"},{"name":"chemicals","type":"related"}],"termid":"FYECO:0000059"}


id: PBO:0081313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 93","termid":"PBO:0081313"}


id: PBO:0077822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3","termid":"PBO:0077822"}


id: PBO:0050484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA11 antisense RNA","termid":"PBO:0050484"}


id: PBO:0083034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(24)-sterol C-methyltransferase; converts zymosterol to fecosterol in the ergosterol biosynthetic pathway by methylating position C-24; localized to lipid particles, the plasma membrane-associated endoplasmic reticulum, and the mitochondrial outer membrane","termid":"PBO:0083034"}


id: PBO:0086688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified in a screen for mutants with decreased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086688"}


id: PBO:0048803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 3","termid":"PBO:0048803"}


id: GO:0016318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which photoreceptors are arranged in ommatidia in the dorsal and ventral fields to be mirror images. The polarity is established in the imaginal discs concurrently with cell fate specification.","definition_xrefs":["PMID:10725247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"establishment of ommatidial planar polarity","termid":"GO:0042067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"ommatidial rotation","termid":"GO:0016318"}


id: PBO:0073869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 5","termid":"PBO:0073869"}


id: GO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal from an upstream receptor or intracellular signal transducer by catalysis of the reaction: ATP protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:bf","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity (obsolete GO:0004702)","synonyms":[{"name":"receptor signaling protein serine/threonine kinase activity","type":"exact"},{"name":"receptor signalling protein serine/threonine kinase activity","type":"exact"}],"termid":"GO:0004702"}


id: GO:0102451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kaempferide + S-adenosyl-L-methionine = 3,4'-O-dimethylkaempferol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"kaempferide 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13937"],"termid":"GO:0102451"}


id: MONDO:0010791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of metabolism characterized by abnormal urinary excretion of myoglobin due to acute destruction of skeletal muscle fibers. The exact prevalence remains unknown. In the majority of cases, the disease manifests in childhood and is often triggered by exertion or infection (febrile illness). Hypertonia, muscle stiffness and muscle pain, impaired kidney function and elevated levels of serum creatine kinase are common clinical features. Mutations in the mitochondrial DNA-encoded cytochrome C oxidase genes (MT-CO1 and MT-CO2) should be considered in patients with recurrent myoglobinuria. Recently, mutations in the LPIN1 gene (chromosome 2p21) have been reported to have a causative role in three patients with recurrent episodes of myoglobinuria, originating from consanguineous families. The disorder may occur sporadically, or be inherited in either a recessive or dominant manner.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary recurrent myoglobinuria","termid":"MONDO:0020504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"myoglobinuria, recurrent","secondary_identifiers":["MEDGEN:333201","MESH:C564018","UMLS:C1838877","OMIM:550500","GARD:3879"],"synonyms":[{"name":"myoglobinuria recurrent","type":"related"},{"name":"myoglobinuria, recurrent","type":"exact"}],"termid":"MONDO:0010791","xrefs":{"Monarch":{"xref_id":"0010791"}}}


id: MONDO:0019284
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"A nail anomaly that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"inherited isolated nail anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79369","OMIMPS:161050","GARD:19000","UMLS:C5681477","DOID:0080683","MEDGEN:1843192"],"synonyms":[{"name":"isolated nail anomaly","type":"related"},{"name":"nail disorder, nonsyndromic congenital","type":"exact"},{"name":"nonsyndromic nail anomaly","type":"exact"}],"termid":"MONDO:0019284","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0019284"}}}


id: PR:Q9C114
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.11 gene.","definition_xrefs":["UniProtKB:Q9C114","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.11","synonyms":[{"name":"Spom972h-SPAC1A6.11","type":"exact"}],"termid":"PR:Q9C114"}


id: PBO:0053446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 393","termid":"PBO:0053446"}


id: PBO:0088641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase Alg11","termid":"PBO:0088641"}


id: FYPO:0006080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type). Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:21317872","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during vegetative growth","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006080"}


id: PBO:0064523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit D","termid":"PBO:0064523"}


id: GO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"physiological muscle hypertrophy","termid":"GO:0003298"}


id: GO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to self antigen","synonyms":[{"name":"down regulation of tolerance induction to self antigen","type":"exact"},{"name":"down-regulation of tolerance induction to self antigen","type":"exact"},{"name":"downregulation of tolerance induction to self antigen","type":"exact"},{"name":"inhibition of tolerance induction to self antigen","type":"narrow"}],"termid":"GO:0002650"}


id: PBO:0065498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 4","termid":"PBO:0065498"}


id: GO:0038153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-C chemokine CCL2 to a C-C chemokine type 4 receptor (CCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-C motif) ligand 2 signaling pathway","termid":"GO:0038148"},{"relation_name":"is_a","term_name":"C-C chemokine receptor CCR4 signaling pathway","termid":"GO:0038152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CCL2-activated CCR4 signaling pathway","synonyms":[{"name":"CCL2/CCR4 signaling pathway","type":"related"}],"termid":"GO:0038153"}


id: GO:0050068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + carbamoyl phosphate = L-homocitrulline + H+ + phosphate.","definition_xrefs":["RHEA:17121","EC:2.1.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"lysine carbamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01396","MetaCyc:LYSINE-CARBAMOYLTRANSFERASE-RXN"],"synonyms":[{"name":"carbamoyl-phosphate:L-lysine carbamoyltransferase activity","type":"related"},{"name":"lysine transcarbamylase activity","type":"related"}],"termid":"GO:0050068"}


id: FYPO:0000023
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119789,119665,119792,119788],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has an abnormally low volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02013":null,"SJAG_03048":null,"SJAG_04280":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"small cell","references_by_uniquename":{"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_04280","SJAG_02013"],"single_locus_genotype_uniquenames":["wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell size: decreased","type":"related"},{"name":"decreased cell size","type":"exact"},{"name":"reduced cell size","type":"exact"}],"termid":"FYPO:0000023","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0019304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose, that occurs in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"anaerobic rhamnose catabolic process","synonyms":[{"name":"anaerobic rhamnose breakdown","type":"exact"},{"name":"anaerobic rhamnose catabolism","type":"exact"},{"name":"anaerobic rhamnose degradation","type":"exact"}],"termid":"GO:0019304"}


id: PR:Q10086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe4 gene.","definition_xrefs":["UniProtKB:Q10086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.07c","synonyms":[{"name":"Spom972h-toe4","type":"exact"}],"termid":"PR:Q10086"}


id: PBO:0065732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 3B","termid":"PBO:0065732"}


id: PBO:0034276
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-developmentally_succeeded_by","termid":"PBO:0034276"}


id: GO:0097636
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf","GOC:autophagy"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of autophagosome membrane (obsolete GO:0097636)","synonyms":[{"name":"intrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"intrinsic to autophagic vacuole membrane","type":"narrow"}],"termid":"GO:0097636"}


id: PBO:0011123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Syt22","termid":"PBO:0011123"}


id: PBO:0072611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal L24 domain containing 1 pseudogene 6","termid":"PBO:0072611"}


id: PBO:0085579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 5.8S rRNA processing; Ccr4p-like RNase required for correct 3'-end formation of 5.8S rRNA at site E; similar to Ngl1p; NGL2 has a paralog, NGL3, that arose from the whole genome duplication","termid":"PBO:0085579"}


id: MONDO:0044699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"SIN3A-related intellectual disability syndrome","secondary_identifiers":["GARD:22043","Orphanet:500163"],"termid":"MONDO:0044699","xrefs":{"Monarch":{"xref_id":"0044699"}}}


id: GO:0046930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex providing a discrete opening in a membrane that allows the passage of gases and/or liquids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pore complex","synonyms":[{"name":"channel-forming toxin activity","type":"related"},{"name":"pore","type":"exact"},{"name":"pore-forming toxin activity","type":"related"}],"termid":"GO:0046930"}


id: GO:1900419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of alcohol catabolic process","termid":"GO:1900419"}


id: FYPO:0006278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PomBase:mah","PMID:22988247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0003290"],"is_obsolete":false,"name":"abnormal O-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006278"}


id: PBO:0114343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator for ribosomal proteins via TOR signaling pathway Crf1/Ifh1","termid":"PBO:0114343"}


id: PBO:0086660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified as interacting with Hsp82p in a high-throughput two-hybrid screen","termid":"PBO:0086660"}


id: PBO:0113117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase II, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; mRNA is asymmetrically distributed to daughter cells in a Sir2p-dependent manner, and asymmetry is lost during replicative aging; expression induced in response to glucose; ENO2 has a paralog, ENO1, that arose from the whole genome duplication","termid":"PBO:0113117"}


id: PBO:0058828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8058","termid":"PBO:0058828"}


id: PBO:0058031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4252","termid":"PBO:0058031"}


id: GO:0060870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the breakdown of the cell wall that contributes to the process of floral organ abscission.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"},{"relation_name":"part_of","term_name":"floral organ abscission","termid":"GO:0010227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall disassembly involved in floral organ abscission","termid":"GO:0060870"}


id: PATO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viability quality inhering in a bearer by virtue of the cessation of the bearer's life.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dead","termid":"PATO:0001422"}


id: FYPO:0001411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered cellular sulfide level","synonyms":[{"name":"abnormal cellular sulfide accumulation","type":"related"},{"name":"abnormal cellular sulfide level","type":"exact"},{"name":"altered cellular acid labile sulfide level","type":"exact"},{"name":"altered cellular sulfide ion level","type":"exact"},{"name":"altered cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"altered cellular sulfide level during vegetative growth","type":"exact"},{"name":"altered cellular sulphide level","type":"exact"}],"termid":"FYPO:0001411"}


id: PBO:0077293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 35B","termid":"PBO:0077293"}


id: GO:0141087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an inflammasome-mediated signaling pathway.","definition_xrefs":["PMID:33467177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of inflammasome-mediated signaling pathway","termid":"GO:0141085"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"inflammasome-mediated signaling pathway","termid":"GO:0141084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammasome-mediated signaling pathway","synonyms":[{"name":"positive regulation of inflammasome-mediated signal transduction","type":"exact"}],"termid":"GO:0141087"}


id: GO:0047109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethyl (S)-3-hydroxyhexanoate + NADP+ = ethyl 3-oxohexanoate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.280","RHEA:18269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"(S)-3-hydroxyacid-ester dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.56-RXN","KEGG_REACTION:R04106"],"synonyms":[{"name":"(S)-3-hydroxyacid ester dehydrogenase activity","type":"exact"},{"name":"3-oxo ester (S)-reductase activity","type":"related"},{"name":"ethyl-(S)-3-hydroxyhexanoate:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0047109"}


id: PBO:0043587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 1","termid":"PBO:0043587"}


id: PBO:0034038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_plasma_membrane_part","termid":"PBO:0034038"}


id: PBO:0086643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the ER","termid":"PBO:0086643"}


id: PBO:0069067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 314, pseudogene","termid":"PBO:0069067"}


id: PBO:0026971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026971"}


id: MONDO:0003864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An indolent, mature B-cell neoplasm composed of small, round B-lymphocytes. When the bone marrow and peripheral blood are involved, the term chronic lymphocytic leukemia is used. The term small lymphocytic lymphoma is restricted to cases which do not show leukemic involvement of the bone marrow and peripheral blood.","definition_xrefs":["NCIT:C27911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell chronic lymphocytic leukemia","termid":"MONDO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","secondary_identifiers":["ONCOTREE:CLLSLL","DOID:6354","MEDGEN:224906","UMLS:C1302547","ICDO:9823/3"],"synonyms":[{"name":"CLL/SLL","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma","type":"exact"},{"name":"chronic lymphocytic leukemia/small lymphocytic lymphoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003864","xrefs":{"Monarch":{"xref_id":"0003864"}}}


id: MONDO:0003165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms of the cerebellum that arise from astrocytes. During childhood the majority are benign pilocytic astrocytomas. In adults both benign and relatively higher grade forms may occur. The most common presenting symptoms are headache, nausea, vomiting, ataxia of gait or limb, paresis, diplopia, and dizziness. Objective signs include weakness, long tract signs, dysmetria, gait ataxia, papilledema, and nystagmus. Surgical resection is often curative.","definition_xrefs":["NCIT:C9475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar astrocytoma","secondary_identifiers":["DOID:4848","MEDGEN:196631","UMLS:C0740480"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of cerebellum","type":"exact"},{"name":"astrocytoma of cerebellum","type":"exact"},{"name":"astrocytoma of the cerebellum","type":"exact"},{"name":"astrocytoma, cerebellar","type":"exact"},{"name":"cerebellar astrocytoma","type":"exact"},{"name":"cerebellum astrocytoma","type":"exact"},{"name":"cerebellum astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003165","xrefs":{"Monarch":{"xref_id":"0003165"}}}


id: FYPO:0007630
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 9 of histone H3 at ribosomal DNA occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at rDNA during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at rDNA during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation at rDNA during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at ribosomal DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0007630"}


id: MONDO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tenosynovitis","termid":"MONDO:0004855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tenosynovitis of foot and ankle","secondary_identifiers":["DOID:312","ICD9:727.06","MEDGEN:1843483","UMLS:C0158331"],"termid":"MONDO:0002517","xrefs":{"Monarch":{"xref_id":"0002517"}}}


id: GO:0047466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-chloro-4-carboxymethylenebut-2-en-1,4-olide = trans-2-chloro-4-carboxymethylenebut-2-en-1,4-olide.","definition_xrefs":["EC:5.2.1.10","RHEA:10924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide isomerase activity","secondary_identifiers":["KEGG_REACTION:R04576","MetaCyc:5.2.1.10-RXN","GO:0018840","UM-BBD_reactionID:r0278"],"synonyms":[{"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide cis-trans-isomerase activity","type":"related"},{"name":"2-chlorocarboxymethylenebutenolide isomerase activity","type":"related"},{"name":"chlorodienelactone isomerase activity","type":"related"}],"termid":"GO:0047466"}


id: PBO:0075334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORBS2 antisense RNA 1","termid":"PBO:0075334"}


id: GO:1990906
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium-like cell projection emanating from the inner segment and running alongside the outer segment of photoreceptors.","definition_xrefs":["GOC:dph","PMID:25125189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"accessory outer segment","termid":"GO:1990906"}


id: MONDO:0956965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma SHH activated that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and the absence of TP53 mutations.","definition_xrefs":["DOID:0080705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma SHH activated","termid":"MONDO:0850197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated and TP53 wild-type","secondary_identifiers":["NCIT:C129443"],"termid":"MONDO:0956965","xrefs":{"Monarch":{"xref_id":"0956965"}}}


id: PBO:0082776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU processome; SSU processome is required for pre-18S rRNA processing, essential protein that interacts with Mpp10p and mediates interactions of Imp4p and Mpp10p with U3 snoRNA","termid":"PBO:0082776"}


id: GO:0035932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aldosterone into the circulatory system. Aldosterone is a pregnane-based steroid hormone produced by the outer-section (zona glomerulosa) of the adrenal cortex in the adrenal gland, and acts on the distal tubules and collecting ducts of the kidney to cause the conservation of sodium, secretion of potassium, increased water retention, and increased blood pressure. The overall effect of aldosterone is to increase reabsorption of ions and water in the kidney.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"aldosterone secretion","termid":"GO:0035932"}


id: PBO:0057148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 296","termid":"PBO:0057148"}


id: PBO:0066193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B divergent transcript","termid":"PBO:0066193"}


id: PATO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting paralytic behaviour when subjected to mechanical shock.","definition_xrefs":["PATOC:flybase"],"direct_ancestors":[{"relation_name":"has_part","term_name":"paralysed","termid":"PATO:0000763"},{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bang sensitive","termid":"PATO:0000759"}


id: PBO:0067757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 56","termid":"PBO:0067757"}


id: MONDO:0006674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare neoplasm, usually benign, derived from mesenchymal fibroblasts located in the submesothelial lining of the PLEURA. It spite of its various synonyms, it has no features of mesothelial cells and is not related to malignant MESOTHELIOMA or asbestos exposure.","definition_xrefs":["EFO:1000835"],"gene_count":0,"genotype_count":0,"name":"obsolete benign fibrous mesothelioma (obsolete MONDO:0006674)","secondary_identifiers":["SCTID:254646001","MESH:D054363","NCIT:C4457","DOID:2653"],"synonyms":[{"name":"fibrous mesothelioma, benign","type":"exact"},{"name":"fibrous mesothelioma, benign (morphologic abnormality)","type":"exact"},{"name":"localized benign fibrous mesothelioma","type":"exact"},{"name":"solitary fibrous tumor, pleural","type":"related"}],"termid":"MONDO:0006674","xrefs":{"Monarch":{"xref_id":"0006674"}}}


id: GO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont involved in interaction with host (obsolete GO:0044148)","synonyms":[{"name":"positive regulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044148"}


id: GO:0050931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a pigmented cell, such as a melanocyte.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell differentiation","secondary_identifiers":["GO:0043357","GO:0043358"],"synonyms":[{"name":"chromatophore differentiation","type":"exact"},{"name":"pigmented cell differentiation","type":"exact"}],"termid":"GO:0050931"}


id: PBO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding (predicted)","termid":"PBO:0000412"}


id: PBO:0080175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 10","termid":"PBO:0080175"}


id: PBO:0005292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear telomere cap complex subunit Ten1","termid":"PBO:0005292"}


id: FYPO:0002733
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated tapered cell","type":"exact"}],"termid":"FYPO:0002733"}


id: MONDO:0010223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recessive X-linked ichthyosis","termid":"MONDO:0010622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"ichthyosis, X-linked, without steroid sulfatase deficiency","secondary_identifiers":["MESH:C564729","MEDGEN:341213","GARD:15250","OMIM:300001","UMLS:C1848387"],"synonyms":[{"name":"ichthyosis, X-linked, without steroid sulfatase deficiency","type":"exact"}],"termid":"MONDO:0010223","xrefs":{"Monarch":{"xref_id":"0010223"}}}


id: PBO:0017574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex HMG box subunit Nht1","termid":"PBO:0017574"}


id: MONDO:1010411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, dog","secondary_identifiers":["OMIA:000344-9615"],"termid":"MONDO:1010411","xrefs":{"Monarch":{"xref_id":"1010411"}}}


id: GO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-16.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-16 binding","synonyms":[{"name":"IL-16 binding","type":"exact"}],"termid":"GO:0042011"}


id: GO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with interleukin-14 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 receptor activity (obsolete GO:0016518)","synonyms":[{"name":"IL-14 receptor activity","type":"exact"},{"name":"IL-14R","type":"exact"}],"termid":"GO:0016518"}


id: PR:Q10089
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.10 gene.","definition_xrefs":["UniProtKB:Q10089","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.10","synonyms":[{"name":"Spom972h-SPAC11D3.10","type":"exact"}],"termid":"PR:Q10089"}


id: PBO:0082951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds the drug cyclosporin A; N-terminally propionylated in vivo; protein abundance increases in response to DNA replication stress","termid":"PBO:0082951"}


id: MONDO:0018546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Serotoninergic syndrome is characterized by an excess of serotonin in the central nervous system, associated with the use of various agents, including selective serotonin reuptake inhibitors (SSRIs).","definition_xrefs":["Orphanet:43116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serotonin syndrome","secondary_identifiers":["icd11.foundation:678764364","UMLS:C0699828","EFO:1001842","SCTID:371089000","GARD:18828","MESH:D020230","MedDRA:10040108","ICD9:333.99","MEDGEN:152119"],"synonyms":[{"name":"serotonergic syndrome","type":"exact"},{"name":"serotonin storm","type":"exact"},{"name":"serotonin toxicity","type":"exact"},{"name":"serotonin toxidrome","type":"exact"}],"termid":"MONDO:0018546","xrefs":{"Monarch":{"xref_id":"0018546"}}}


id: SO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000452 transgene_attribute (obsolete SO:0000452)","termid":"SO:0000452"}


id: MONDO:0018884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Roch-Leri mesosomatous lipomatosis is a rare benign autosomal dominant disorder of fat tissue proliferation characterized by the presence of multiple small lipomas of 2 to 5 cm in diameter in the middle third of the body (i.e. the forearms, trunk, and upper thighs), and which are generally painless and can be easily removed by local anesthesia, provided that they are not too numerous or confluent. There have been no further descriptions in the literature since 1984.","definition_xrefs":["Orphanet:529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roch-Leri mesosomatous lipomatosis","secondary_identifiers":["UMLS:C4274284","SCTID:716772007","MEDGEN:896565","GARD:4733"],"synonyms":[{"name":"Roch-Leri syndrome","type":"related"}],"termid":"MONDO:0018884","xrefs":{"Monarch":{"xref_id":"0018884"}}}


id: PBO:0079622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M","termid":"PBO:0079622"}


id: PR:O60152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase UBR2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.02","secondary_identifiers":["UniProtKB:O60152"],"synonyms":[{"name":"N-end-recognizing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-UBR2","type":"exact"}],"termid":"PR:O60152"}


id: PR:O94343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.10c gene.","definition_xrefs":["UniProtKB:O94343","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C1271.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.10c","synonyms":[{"name":"Spom972h-SPBC1271.10c","type":"exact"}],"termid":"PR:O94343"}


id: MONDO:0010124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumb, distal hyperextensibility of","secondary_identifiers":["OMIM:274200","MEDGEN:338552","UMLS:C1848817"],"synonyms":[{"name":"thumb, distal hyperextensibility of","type":"exact"}],"termid":"MONDO:0010124","xrefs":{"Monarch":{"xref_id":"0010124"}}}


id: MONDO:0045072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal secretion of hormones in conjunction with neoplastic growth occurring anywhere in the body.","definition_xrefs":["NCIT:C4065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic hormone secretion syndrome associated with neoplasia","secondary_identifiers":["MEDGEN:208863","UMLS:C0851689"],"synonyms":[{"name":"ectopic hormone secretion syndrome associated with neoplasia","type":"exact"},{"name":"neoplasm associated ectopic hormone secretion syndrome","type":"exact"}],"termid":"MONDO:0045072","xrefs":{"Monarch":{"xref_id":"0045072"}}}


id: GO:0004072
data:
  {"annotated_genes":["SJAG_00881"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74001],"is_not":false,"summary":null,"term":"GO:0004072"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate + ATP = 4-phospho-L-aspartate + ADP + H+.","definition_xrefs":["EC:2.7.2.4","RHEA:23776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"aspartate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00480","MetaCyc:ASPARTATEKIN-RXN"],"synonyms":[{"name":"ATP:L-aspartate 4-phosphotransferase activity","type":"related"},{"name":"aspartic kinase activity","type":"related"},{"name":"aspartokinase activity","type":"related"},{"name":"beta-aspartokinase activity","type":"related"}],"termid":"GO:0004072","terms_by_termid":{"GO:0004072":null}}


id: PBO:0083916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin; polarisome component; nucleates the formation of linear actin filaments, involved in cell processes such as budding and mitotic spindle orientation which require the formation of polarized actin cables; recruited to the division site in a Glc7p/Ref2p dependent manner following release of Bnr1p; functionally redundant with BNR1","termid":"PBO:0083916"}


id: PBO:0001647
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.130","termid":"PBO:0001647"}


id: GO:0010120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole phytoalexin biosynthetic process","termid":"GO:0009700"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"camalexin metabolic process","termid":"GO:0052317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"camalexin biosynthetic process","secondary_identifiers":["MetaCyc:CAMALEXIN-SYN"],"synonyms":[{"name":"camalexin anabolism","type":"exact"},{"name":"camalexin biosynthesis","type":"exact"},{"name":"camalexin formation","type":"exact"},{"name":"camalexin synthesis","type":"exact"}],"termid":"GO:0010120"}


id: FYPO:0002218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and have germ tubes with normal morphology (i.e. size, shape, and structure) that do not septate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, normal unseptated germ tube morphology (obsolete FYPO:0002218)","synonyms":[{"name":"inviable germinated spore population, normal unseptated germ tube morphology","type":"exact"}],"termid":"FYPO:0002218"}


id: GO:0090650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.","definition_xrefs":["GOC:sl","PMID:21525936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"},{"relation_name":"is_a","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"},{"relation_name":"is_a","term_name":"response to oxygen-glucose deprivation","termid":"GO:0090649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen-glucose deprivation","synonyms":[{"name":"cellular response to OGD","type":"exact"}],"termid":"GO:0090650"}


id: PATO:0002455
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A  quality inhering in a bearer by virtue of the bearer's architecture bearing resemblence to a corymb type of inflorescence.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corymb-like","termid":"PATO:0002455"}


id: GO:0032027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"myosin light chain binding","termid":"GO:0032027"}


id: MOD:01260
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:270#Y","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site Y","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01260"}


id: FYPO:0002225
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are longer than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, elongated cells (obsolete FYPO:0002225)","synonyms":[{"name":"inviable microcolony, elongated vegetative cells","type":"exact"},{"name":"inviable microcolony, long cells","type":"exact"}],"termid":"FYPO:0002225"}


id: MONDO:0012244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 5","secondary_identifiers":["GARD:15455","MESH:C563744","OMIM:609299","UMLS:C1836436","MEDGEN:373085"],"synonyms":[{"name":"HPC5","type":"related"},{"name":"prostate cancer, hereditary, 5","type":"exact"},{"name":"prostate cancer, hereditary, type 5","type":"exact"}],"termid":"MONDO:0012244","xrefs":{"Monarch":{"xref_id":"0012244"}}}


id: GO:0004764
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60123],"is_not":false,"summary":null,"term":"GO:0004764"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NADP+ = 3-dehydroshikimate + NADPH + H+.","definition_xrefs":["EC:1.1.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R02413","MetaCyc:SHIKIMATE-5-DEHYDROGENASE-RXN","RHEA:17737"],"synonyms":[{"name":"5-dehydroshikimate reductase activity","type":"related"},{"name":"5-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NADP(+) 5-oxidoreductase activity","type":"related"},{"name":"shikimate:NADP(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0004764","terms_by_termid":{"GO:0004764":null}}


id: MONDO:0100346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary microcephaly refers to the clinical finding of a head circumference more than than 3 standard deviations (SD) below the age- and sex-related mean, present at birth. Primary microcephaly is a static developmental anomaly, distinguished from secondary microcephaly, which refers to a progressive neurodegenerative condition. Microcephaly is a disorder of fetal brain growth; individuals with microcephaly have small brains and almost always have intellectual disability, although rare individuals with mild microcephaly (-3 SD) and normal intelligence have been reported. Additional clinical features may include short stature or mild seizures. These clinical features include Seckel syndrome, a rare autosomal recessive disorder characterized by intrauterine growth retardation, dwarfism, microcephaly with intellectual disability.","definition_xrefs":["PMID:9128935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly with or without short stature","termid":"MONDO:0100346","xrefs":{"Monarch":{"xref_id":"0100346"}}}


id: PBO:0057925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3650","termid":"PBO:0057925"}


id: PBO:0041924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBS mRNA stabilizing lncRNA","termid":"PBO:0041924"}


id: PBO:0055250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2677","termid":"PBO:0055250"}


id: PBO:0109641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1M (pseudogene)","termid":"PBO:0109641"}


id: GO:1990223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the cytokinin levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24124900"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of cytokinin levels in host (obsolete GO:1990223)","termid":"GO:1990223"}


id: MONDO:0010114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thanatophoric dysplasia","termid":"MONDO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"thanatophoric dysplasia, Glasgow variant","secondary_identifiers":["MEDGEN:376457","MESH:C536506","UMLS:C1848865","Orphanet:93275","GARD:5165","OMIM:273680"],"synonyms":[{"name":"neonatally lethal short-limb skeletal dysplasia, Glasgow type","type":"related"},{"name":"thanatophoric dysplasia, Glasgow variant","type":"exact"}],"termid":"MONDO:0010114","xrefs":{"Monarch":{"xref_id":"0010114"}}}


id: GO:0035801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adrenal cortex over time, from its formation to the mature structure. The adrenal cortex is located at the periphery of the adrenal gland and controls glucose and electrolyte metabolism, response to stress and sexual development through the production of different classes of steroid hormones (glucocorticoids, mineralocorticoids and androgens).","definition_xrefs":["PMID:21115154","PMID:12185666","Wikipedia:Adrenal_cortex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"adrenal gland development","termid":"GO:0030325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal cortex development","synonyms":[{"name":"adrenal gland cortex development","type":"exact"}],"termid":"GO:0035801"}


id: GO:0098681
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane bound, electron dense structure associated that extends perpendicular to the presynaptic membrane in ribbon synapses. The ribbon's surface is studded with small particles to which synaptic vesicles tether via fine filaments. The tethered vesicles function as a pool, several fold greater than the docked pool available for fast release, which supports sustained release of vesicles. Synaptic ribbons may be plate like or spherical.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synaptic ribbon","termid":"GO:0098681"}


id: MONDO:0008351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pupil, egg-shaped (obsolete MONDO:0008351)","secondary_identifiers":["OMIM:178800","MESH:C566731"],"synonyms":[{"name":"egg shaped pupils","type":"related"},{"name":"ovoid pupils","type":"related"},{"name":"pupil, egg-shaped","type":"exact"}],"termid":"MONDO:0008351","xrefs":{"Monarch":{"xref_id":"0008351"}}}


id: GO:0061966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial formation of the type asymmetry in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:BHF","PMID:18629866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of left/right asymmetry","termid":"GO:0061966"}


id: MONDO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The deposition of calcium on the cornea, resulting in pain and decreased visual acuity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"keratopathy","termid":"MONDO:0002261"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"band keratopathy","secondary_identifiers":["MEDGEN:56354","NCIT:C118765","icd11.foundation:184627034","MESH:C562399","OMIM:217500","SCTID:35055000","UMLS:C0155120","DOID:11164","ICD9:371.43"],"synonyms":[{"name":"band keratopathy","type":"exact"},{"name":"band-shaped keratopathy","type":"exact"},{"name":"corneal dystrophy, band-SHAPED","type":"related"}],"termid":"MONDO:0009016","xrefs":{"Monarch":{"xref_id":"0009016"}}}


id: PBO:0064770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase like 1 pseudogene 1","termid":"PBO:0064770"}


id: PBO:0004150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair nuclease Rad13","termid":"PBO:0004150"}


id: FYPO:0008289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a guanyl-nucleotide exchange factor activity is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abnormal guanyl-nucleotide exchange factor activity","synonyms":[{"name":"abnormal GEF activity","type":"exact"}],"termid":"FYPO:0008289"}


id: PBO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyl-oligosaccharide 1,2-alpha-mannosidase","termid":"PBO:0001995"}


id: GO:2000181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"negatively_regulates","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"}


id: GO:0045221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of FasL.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of FasL production (obsolete GO:0045221)","synonyms":[{"name":"down regulation of FasL biosynthetic process","type":"exact"},{"name":"down-regulation of FasL biosynthetic process","type":"exact"},{"name":"downregulation of FasL biosynthetic process","type":"exact"},{"name":"inhibition of FasL biosynthetic process","type":"narrow"},{"name":"negative regulation of FasL anabolism","type":"exact"},{"name":"negative regulation of FasL biosynthesis","type":"exact"},{"name":"negative regulation of FasL biosynthetic process","type":"exact"},{"name":"negative regulation of FasL formation","type":"exact"},{"name":"negative regulation of FasL synthesis","type":"exact"}],"termid":"GO:0045221"}


id: PBO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Batten's disease","termid":"PBO:0001312"}


id: PBO:0080867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjeF N-terminal domain containing 3","termid":"PBO:0080867"}


id: MONDO:0020671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete susceptibility to ischemic stroke (obsolete MONDO:0020671)","secondary_identifiers":["OMIM:601367"],"synonyms":[{"name":"cerebral infarction","type":"related"},{"name":"cerebral infarction, susceptibility to","type":"exact"},{"name":"cerebrovascular accident","type":"related"},{"name":"ischemic stroke, susceptibility to","type":"exact"},{"name":"stroke, ischemic","type":"related"},{"name":"stroke, ischemic, susceptibility to","type":"exact"},{"name":"stroke, susceptibility to","type":"exact"}],"termid":"MONDO:0020671","xrefs":{"Monarch":{"xref_id":"0020671"}}}


id: GO:0005289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arginine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"high-affinity L-arginine transmembrane transporter activity","synonyms":[{"name":"high affinity arginine transmembrane transporter activity","type":"exact"},{"name":"high-affinity arginine transmembrane transporter activity","type":"exact"},{"name":"high-affinity arginine transporter activity","type":"broad"}],"termid":"GO:0005289"}


id: GO:0009840
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Clp endopeptidase complex located in the chloroplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase Clp complex","termid":"GO:0009368"},{"relation_name":"part_of","term_name":"chloroplast stroma","termid":"GO:0009570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"chloroplastic endopeptidase Clp complex","termid":"GO:0009840"}


id: MONDO:0006186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the duodenum.","direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine adenocarcinoma","termid":"MONDO:0003198"},{"relation_name":"is_a","term_name":"carcinoma of duodenum","termid":"MONDO:0021335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"duodenal adenocarcinoma","secondary_identifiers":["SCTID:408644002","ONCOTREE:DA","MEDGEN:82985","UMLS:C0278804","DOID:10816","EFO:1000223","NCIT:C7889"],"synonyms":[{"name":"adenocarcinoma of duodenum","type":"exact"},{"name":"adenocarcinoma of the duodenum","type":"exact"},{"name":"duodenal adenocarcinoma","type":"exact"},{"name":"duodenum adenocarcinoma","type":"exact"}],"termid":"MONDO:0006186","xrefs":{"Monarch":{"xref_id":"0006186"}}}


id: MONDO:0020291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplastic right-heart syndrome (HRHS) is a rare, cyanotic congenital heart malformation caused by underdevelopment of the right-sided heart structures (tricuspid valve, RV, pulmonary valve, and pulmonary artery) commonly associated with an atrial septal defect, ostium secundum type. Pulmonary blood flow is diminished and right-to-left shunting occurs at the atrial level, leading to dyspnea, fatigue, atrial arrhythmias, right-sided heart failure, hypoxemia, repeated miscarriages that were mostly due to hypoxemia and cyanosis. Two subtypes of HRHS have been characterized: pulmonary atresia-intact ventricular septum and right ventricular hypoplasia.","definition_xrefs":["Orphanet:98723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"univentricular cardiopathy","termid":"MONDO:0019820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoplastic right heart syndrome","secondary_identifiers":["NCIT:C99053","MedDRA:10050053","SCTID:268180007","GARD:2922","ICD10CM:Q22.6","MEDGEN:83376","MedDRA:10064962","UMLS:C0344963","ICD9:746.89","DOID:0070315"],"synonyms":[{"name":"right hypoplastic heart syndrome","type":"exact"}],"termid":"MONDO:0020291","xrefs":{"Monarch":{"xref_id":"0020291"}}}


id: PBO:0053739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 964","termid":"PBO:0053739"}


id: PR:O13997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein IMPACT that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16301:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein IMPACT homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.02","secondary_identifiers":["UniProtKB:O13997"],"synonyms":[{"name":"SPAC27E2.02","type":"related"},{"name":"Spom972h-IMPACT","type":"exact"}],"termid":"PR:O13997"}


id: PBO:0061292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 3","termid":"PBO:0061292"}


id: PBO:0086656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has no significant sequence similarity to any known protein","termid":"PBO:0086656"}


id: PBO:0091307
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human Rab6","termid":"PBO:0091307"}


id: SO:0002094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region at a non-allelic position where exchange of genetic material happens as a result of homologous recombination.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_hotspot","termid":"SO:0000339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_allelic_homologous_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:non_allelic_homologous","type":"exact"},{"name":"INSDC_qualifier:non_allelic_homologous_recombination","type":"exact"},{"name":"NAHRR","type":"exact"},{"name":"non allelic homologous recombination region","type":"exact"}],"termid":"SO:0002094"}


id: PBO:0088855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD-finger protein Cph2","termid":"PBO:0088855"}


id: GO:0072169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the posterior mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"is_a","term_name":"specification of mesonephric tubule identity","termid":"GO:0072167"},{"relation_name":"part_of","term_name":"posterior mesonephric tubule development","termid":"GO:0072166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of posterior mesonephric tubule identity","termid":"GO:0072169"}


id: PBO:0084026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA","termid":"PBO:0084026"}


id: SO:0000435
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypurine tract within an LTR_retrotransposon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RR_tract","synonyms":[{"name":"LTR retrotransposon poly purine tract","type":"related"},{"name":"RR tract","type":"exact"}],"termid":"SO:0000435"}


id: GO:0015445
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ag+(in) = ADP + phosphate + Ag+(out).","definition_xrefs":["RHEA:14733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silver ion transmembrane transporter activity","termid":"GO:0015080"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"P-type silver transporter activity","secondary_identifiers":["MetaCyc:3.6.3.53-RXN","EC:7.2.2.15"],"synonyms":[{"name":"ATP phosphohydrolase (Ag+-exporting)","type":"related"},{"name":"Ag+-exporting ATPase activity","type":"related"},{"name":"silver exporting ATPase activity","type":"exact"},{"name":"silver transmembrane transporter activity, phosphorylative mechanism","type":"exact"},{"name":"silver-exporting ATPase activity","type":"related"}],"termid":"GO:0015445"}


id: MONDO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete porphyria (obsolete MONDO:0001675)","termid":"MONDO:0001675","xrefs":{"Monarch":{"xref_id":"0001675"}}}


id: PBO:0042301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8B family member 2","termid":"PBO:0042301"}


id: MONDO:0018535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystadenocarcinoma that involves the biliary tree.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract cancer","termid":"MONDO:0003060"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"biliary cystadenocarcinoma","secondary_identifiers":["MEDGEN:473526","UMLS:C2064409","GARD:21790","Orphanet:424982"],"synonyms":[{"name":"intrahepatic bile duct cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0018535","xrefs":{"Monarch":{"xref_id":"0018535"}}}


id: MONDO:0012046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital corneal opacities, cornea guttata, and corectopia","secondary_identifiers":["UMLS:C1837970","OMIM:608484","MEDGEN:324911","MESH:C563921"],"synonyms":[{"name":"congenital corneal opacities, cornea guttata, and corectopia","type":"exact"},{"name":"corneal opacities, congenital, with cornea guttata and corectopia","type":"related"}],"termid":"MONDO:0012046","xrefs":{"Monarch":{"xref_id":"0012046"}}}


id: PBO:0080749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X antigen family member 5","termid":"PBO:0080749"}


id: PBO:0084995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase localized to the perinuclear ER; produces superoxide from NADPH; overexpression causes MCA1 dependent apoptosis; likely involved in superoxide-mediated regulation of the actin cytoskeleton; member of a conserved superfamily of NADPH oxidases (NOX enzymes); has similarity to iron/copper reductases (FRE1-8), particularly Fre8p","termid":"PBO:0084995"}


id: GO:0036350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The non-sexual aggregation of single-celled organisms mediated by the binding of cell wall proteins on one cell to mannose residues on the other.","definition_xrefs":["PMID:9851992","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flocculation","termid":"GO:0000128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"mannose-specific flocculation","secondary_identifiers":["GO:0098612"],"synonyms":[{"name":"cell-cell adhesion involved in mannose-specific flocculation","type":"exact"}],"termid":"GO:0036350"}


id: MONDO:0011513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease, familial early-onset, with coexisting amyloid and prion pathology","secondary_identifiers":["MESH:C565728","GARD:16508","OMIM:605055","MEDGEN:341884","UMLS:C1857933"],"synonyms":[{"name":"Alzheimer disease, familial early-onset, with coexisting amyloid and prion pathology","type":"exact"}],"termid":"MONDO:0011513","xrefs":{"Monarch":{"xref_id":"0011513"}}}


id: MONDO:0044233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hair whorl (obsolete MONDO:0044233)","secondary_identifiers":["OMIM:139400"],"synonyms":[{"name":"Cowlick","type":"related"},{"name":"Double hair whorl","type":"related"},{"name":"hair whorl","type":"related"}],"termid":"MONDO:0044233","xrefs":{"Monarch":{"xref_id":"0044233"}}}


id: MONDO:0041366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of epiglottitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute laryngitis","termid":"MONDO:0004777"},{"relation_name":"is_a","term_name":"epiglottitis","termid":"MONDO:0005753"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute epiglottitis","secondary_identifiers":["icd11.foundation:1070805666","MEDGEN:510093","UMLS:C0155814","SCTID:29608009"],"synonyms":[{"name":"acute epiglottitis","type":"exact"},{"name":"acute epiglottitis and supraglottitis","type":"related"},{"name":"epiglottitis, acute","type":"exact"}],"termid":"MONDO:0041366","xrefs":{"Monarch":{"xref_id":"0041366"}}}


id: PBO:0054680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2088","termid":"PBO:0054680"}


id: GO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of leucophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leucophore differentiation","termid":"GO:0048775"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"leucophore differentiation","termid":"GO:0048772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leucophore differentiation","synonyms":[{"name":"down regulation of leucophore differentiation","type":"exact"},{"name":"down-regulation of leucophore differentiation","type":"exact"},{"name":"downregulation of leucophore differentiation","type":"exact"},{"name":"inhibition of leucophore differentiation","type":"narrow"}],"termid":"GO:0048776"}


id: GO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase during M phase of mitosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telophase","termid":"GO:0051326"},{"relation_name":"part_of","term_name":"mitotic M phase","termid":"GO:0000087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0008150","GO:0000087"],"is_obsolete":false,"name":"mitotic telophase","termid":"GO:0000093"}


id: PBO:0070500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 35","termid":"PBO:0070500"}


id: PBO:0063836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phytanoyl-CoA 2-hydroxylase interacting protein like","termid":"PBO:0063836"}


id: PBO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene synthase Erg9 (predicted)","termid":"PBO:0003389"}


id: GO:0000049
data:
  {"annotated_genes":["SJAG_01302","SJAG_02099","SJAG_00488","SJAG_02637","SJAG_03545","SJAG_01877","SJAG_04680","SJAG_03584","SJAG_02352","SJAG_01704","SJAG_04181","SJAG_01797","SJAG_02977","SJAG_03629","SJAG_03071","SJAG_04175","SJAG_02661","SJAG_00886","SJAG_02263","SJAG_04409","SJAG_04762","SJAG_03932","SJAG_04582","SJAG_01074","SJAG_03461","SJAG_01248","SJAG_04856","SJAG_00936","SJAG_00325","SJAG_00466","SJAG_04993","SJAG_00195","SJAG_01314","SJAG_00358","SJAG_04285","SJAG_02615","SJAG_02288","SJAG_04700","SJAG_03626","SJAG_02042","SJAG_00579","SJAG_04756","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58950,59138,60790,60827,61193,61477,62142,63199,63686,64380,67975,68225,69293,69434,71002,71495,72156,72561,72696,72707,72805,73254,73851,73976,77155,77889,79173,79828,79927,88081,94816,95050,98812,102589,103207,106109,108456,109987,112459,113177,118227],"is_not":false,"summary":null,"term":"GO:0000049"},{"annotations":[105744,97560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990856"}]},"cv_name":"molecular_function","definition":"Binding to a transfer RNA.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00195":null,"SJAG_00325":null,"SJAG_00358":null,"SJAG_00466":null,"SJAG_00488":null,"SJAG_00579":null,"SJAG_00886":null,"SJAG_00936":null,"SJAG_01074":null,"SJAG_01248":null,"SJAG_01302":null,"SJAG_01314":null,"SJAG_01704":null,"SJAG_01797":null,"SJAG_01877":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02263":null,"SJAG_02288":null,"SJAG_02352":null,"SJAG_02615":null,"SJAG_02637":null,"SJAG_02661":null,"SJAG_02977":null,"SJAG_03071":null,"SJAG_03461":null,"SJAG_03545":null,"SJAG_03584":null,"SJAG_03626":null,"SJAG_03629":null,"SJAG_03932":null,"SJAG_04175":null,"SJAG_04181":null,"SJAG_04285":null,"SJAG_04409":null,"SJAG_04582":null,"SJAG_04680":null,"SJAG_04700":null,"SJAG_04756":null,"SJAG_04762":null,"SJAG_04856":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000946"],"synonyms":[{"name":"base pairing with tRNA","type":"narrow"}],"termid":"GO:0000049","terms_by_termid":{"GO:0000049":null,"GO:1990856":null}}


id: PBO:0001393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated proten Vts1 (predicted)","termid":"PBO:0001393"}


id: PBO:0063160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 6","termid":"PBO:0063160"}


id: PBO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-16","termid":"PBO:0075053"}


id: PBO:0044174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNA2 antisense RNA 1","termid":"PBO:0044174"}


id: GO:0072346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when cyclic adenosine diphosphate ribose (cADPR) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:11752598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cADPR-sensitive calcium-release channel activity","termid":"GO:0072346"}


id: MONDO:0012766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 37 is a pure form of hereditary spastic paraplegia characterized by a childhood- to adulthood-onset of slowly progressive spastic gait, extensor plantar responses, brisk tendon reflexes in arms and legs, decreased vibration sense at ankles and urinary dysfunction. Ankle clonus is also reported in some patients.","definition_xrefs":["Orphanet:171612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 37","secondary_identifiers":["GARD:17064","MEDGEN:422458","MESH:C567931","SCTID:763369007","OMIM:611945","UMLS:C2936880","DOID:0110788"],"synonyms":[{"name":"SPG37","type":"exact"},{"name":"autosomal dominant spastic paraplegia 37","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 37","type":"exact"},{"name":"hereditary spastic paraplegia type 37","type":"exact"},{"name":"spastic paraplegia 37, autosomal dominant","type":"related"}],"termid":"MONDO:0012766","xrefs":{"Monarch":{"xref_id":"0012766"}}}


id: PBO:0029846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_rDNA","termid":"PBO:0029846"}


id: MONDO:0013995
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87387],"is_not":false,"summary":null,"term":"MONDO:0013995"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"},{"relation_name":"is_a","term_name":"familial intrahepatic cholestasis","termid":"MONDO:0017290"},{"relation_name":"is_a","term_name":"intrahepatic cholestasis of pregnancy","termid":"MONDO:0100429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis, intrahepatic, of pregnancy, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:767155","UMLS:C3554241","DOID:0070229","OMIM:614972","GARD:15888"],"synonyms":[{"name":"ICP3","type":"related"},{"name":"cholestasis, intrahepatic, of pregnancy 3","type":"exact"},{"name":"cholestasis, intrahepatic, of pregnancy type 3","type":"exact"}],"termid":"MONDO:0013995","terms_by_termid":{"MONDO:0013995":null},"xrefs":{"Monarch":{"xref_id":"0013995"}}}


id: GO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sequential series of modifications to a set of proteins where the product of one reaction catalyzes the following reaction, ultimately leading to the generation of a mature protein. Modifications typically include proteolysis or covalent modification, and may also include binding events.","definition_xrefs":["GOC:mah","GOC:pde","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"protein activation cascade","synonyms":[{"name":"protein activation pathway","type":"exact"},{"name":"protein activitory cascade","type":"exact"}],"termid":"GO:0072376"}


id: GO:0042768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of an ecdysteroid at carbon position 2.","definition_xrefs":["PMID:12177427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ecdysteroid 2-hydroxylase activity","termid":"GO:0042768"}


id: PBO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter A, lysophospholipid","termid":"PBO:0056804"}


id: PBO:0045886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1E1-BLOC1S5 readthrough (NMD candidate)","termid":"PBO:0045886"}


id: PR:O13826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rfp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase complex slx8-rfp subunit rfp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.10","synonyms":[{"name":"RING finger protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rfp1","type":"exact"},{"name":"meiotically up-regulated gene 140 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13826"}


id: FYPO:0000554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which pseudohyphal growth is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell growth","termid":"FYPO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal pseudohyphal growth","secondary_identifiers":["FYPO:0000439"],"synonyms":[{"name":"filamentous growth: normal","type":"broad"},{"name":"normal filamentous growth","type":"broad"},{"name":"pseudohyphal growth: normal","type":"related"}],"termid":"FYPO:0000554"}


id: FYPO:0007470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification","termid":"FYPO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone modification during G0","synonyms":[{"name":"abnormal histone modification during cell quiescence","type":"exact"},{"name":"abnormal histone modification during quiescence","type":"exact"}],"termid":"FYPO:0007470"}


id: GO:0048202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["ISBN:0716731363","GOC:jid","GOC:mah","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"},{"relation_name":"is_a","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0061024","GO:0016192","GO:0006810","GO:0065003"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle","synonyms":[{"name":"clathrin coating of Golgi-derived vesicle","type":"exact"}],"termid":"GO:0048202"}


id: PBO:0072179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 6","termid":"PBO:0072179"}


id: GO:0043219
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-compact myelin located adjacent to the nodes of Ranvier in a myelin segment. These non-compact regions include cytoplasm from the cell responsible for synthesizing the myelin. Lateral loops are found in the paranodal region adjacent to the nodes of Ranvier, while Schmidt-Lantermann clefts are analogous structures found within the compact myelin internode.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myelin sheath","termid":"GO:0043209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral loop","secondary_identifiers":["NIF_Subcellular:sao1354781919","NIF_Subcellular:sao1067215520"],"synonyms":[{"name":"Schwann cell paranodal termination","type":"related"},{"name":"oligodendrocyte paranodal termination","type":"related"},{"name":"paranodal loop","type":"related"}],"termid":"GO:0043219"}


id: GO:0019295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"coenzyme M metabolic process","termid":"GO:0019296"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"coenzyme M biosynthetic process","secondary_identifiers":["MetaCyc:P261-PWY"],"synonyms":[{"name":"coenzyme M anabolism","type":"exact"},{"name":"coenzyme M biosynthesis","type":"exact"},{"name":"coenzyme M formation","type":"exact"},{"name":"coenzyme M synthesis","type":"exact"}],"termid":"GO:0019295"}


id: GO:0004711
data:
  {"annotated_genes":["SJAG_01047"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117430],"is_not":false,"summary":null,"term":"GO:0004711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ribosomal protein S6 + ATP = ribosomal protein S6 phosphate + ATP.","definition_xrefs":["GOC:mah","PMID:9822608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01047":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0004672","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"ribosomal protein S6 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004711","terms_by_termid":{"GO:0004711":null}}


id: GO:0008717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanyl-D-alanine endopeptidase activity (obsolete GO:0008717)","synonyms":[{"name":"D-alanyl-D-alanine endopeptidase activity","type":"exact"},{"name":"penicillin-binding protein 7","type":"narrow"},{"name":"penicillin-binding protein 8","type":"narrow"}],"termid":"GO:0008717"}


id: GO:0102276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate(2-) + O2 + 2 H+ = ethene + 3 carbon dioxide + H2O.","definition_xrefs":["GOC:pz","EC:1.13.12.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxoglutarate oxygenase/decarboxylase (ethylene-forming) activity","secondary_identifiers":["RHEA:31523","MetaCyc:RXN-12538"],"termid":"GO:0102276"}


id: GO:0033751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: linoleate + O2 = (9Z,12Z)-(7S,8S)-dihydroxyoctadeca-9,12-dienoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete linoleate 8R-lipoxygenase (obsolete GO:0033751)","synonyms":[{"name":"5,8-linoleate diol synthase (bifunctional enzyme)","type":"related"},{"name":"7,8-linoleate diol synthase (bifunctional enzyme)","type":"related"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0033751"}


id: FYPO:0000289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"translation regulation phenotype","synonyms":[{"name":"fission yeast translation regulation phenotype","type":"exact"}],"termid":"FYPO:0000289"}


id: MONDO:1040015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease characterized by life-threatening organ dysfunction due to a dysreguated host response.","definition_xrefs":["PMID:26903338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious disease with sepsis","termid":"MONDO:1040015","xrefs":{"Monarch":{"xref_id":"1040015"}}}


id: FYPO:0002440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cable distribution is abnormal. The process normally establishes the spatial arrangement of actin cables within the cell. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable organization","termid":"FYPO:0002030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cable distribution","synonyms":[{"name":"abnormal actin cable distribution during mitotic cell cycle","type":"related"},{"name":"abnormal actin cable distribution during vegetative growth","type":"exact"},{"name":"abnormal actin cable localization","type":"related"},{"name":"abnormal formin-nucleated actin cable distribution","type":"exact"}],"termid":"FYPO:0002440"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: MONDO:0003145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system embryonal tumor, not otherwise specified arising from the supratentorial region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"supratentorial primitive neuroectodermal tumor","secondary_identifiers":["DOID:4791","UMLS:C1336538","ICD9:209.30","NCIT:C6968","MEDGEN:234914","SCTID:699318007"],"synonyms":[{"name":"CNS/supratentorial PNET","type":"exact"},{"name":"supratent. primitive neuro. tumor","type":"exact"},{"name":"supratent. primitive neuro. tumour","type":"exact"},{"name":"supratentorial PNET","type":"exact"},{"name":"supratentorial primitive neuroectodermal tumor","type":"exact"}],"termid":"MONDO:0003145","xrefs":{"Monarch":{"xref_id":"0003145"}}}


id: PR:Q9Y7U3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7U3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylglycerophosphatase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.02","synonyms":[{"name":"PGP phosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gep4","type":"exact"}],"termid":"PR:Q9Y7U3"}


id: PBO:0057120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 204","termid":"PBO:0057120"}


id: PBO:0086828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YOR338W transcription is regulated by Azf1p and its transcript is a specific target of the G protein effector Scp160p; identified as being required for sporulation in a high-throughput mutant screen; YOR338W has a paralog, FUN19, that arose from the whole genome duplication","termid":"PBO:0086828"}


id: MONDO:0044726
data:
  {"annotated_genes":["SJAG_04260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85785],"is_not":false,"summary":null,"term":"MONDO:0044726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"disorder of zinc metabolism","termid":"MONDO:0017764"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0005240"],"is_obsolete":false,"name":"psychomotor regression-oculomotor apraxia-movement disorder-nephropathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1621949","Orphanet:505242","OMIM:617595","GARD:17943","UMLS:C4539828"],"synonyms":[{"name":"BILAPES","type":"related"},{"name":"Birk-Landau-Perez syndrome","type":"related"},{"name":"Cerebrorenal syndrome, Perez type","type":"exact"}],"termid":"MONDO:0044726","terms_by_termid":{"MONDO:0044726":null},"xrefs":{"Monarch":{"xref_id":"0044726"}}}


id: PBO:0038572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR antisense RNA 1","termid":"PBO:0038572"}


id: PBO:0045076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 3","termid":"PBO:0045076"}


id: FYECO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cisplatin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cisplatin","termid":"FYECO:0000091"}


id: MONDO:0000914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A CADASIL characterized by migraine, strokes, and white matter lesions that has material basis in heterozygous mutation in the NOTCH3 gene on chromosome 19p13.","definition_xrefs":["PMID:8878478","DOID:0111035","PMID:10476042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","termid":"MONDO:0007432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1","secondary_identifiers":["Orphanet:136","GARD:1049","OMIM:125310","MESH:D046589","MEDGEN:1634330","icd11.foundation:1621899838","NORD:883","UMLS:C4551768","MedDRA:10065551","NCIT:C84606","SCTID:390936003"],"synonyms":[{"name":"CADASIL","type":"exact"},{"name":"CADASIL 1","type":"exact"},{"name":"CADASIL syndrome","type":"exact"},{"name":"CADASIL type 1","type":"exact"},{"name":"CADASIL1","type":"exact"},{"name":"CASIL","type":"exact"},{"name":"autosomal dominant cerebral arteriopathy with subcortical infarcts and leukoencephalopathy type 1","type":"exact"},{"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy","type":"related"},{"name":"cerebral arteriopathy with subcortical infarcts and leukoencephalopathy 1","type":"exact"},{"name":"cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1","type":"exact"},{"name":"cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy","type":"broad"},{"name":"dementia, hereditary multi-infarct type","type":"exact"},{"name":"familial vascular leukoencephalopathy","type":"related"},{"name":"hereditary multi-infarct dementia","type":"exact"}],"termid":"MONDO:0000914","xrefs":{"Monarch":{"xref_id":"0000914"}}}


id: PBO:0058535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6080","termid":"PBO:0058535"}


id: PBO:0051243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-62-1 (pseudogene)","termid":"PBO:0051243"}


id: SO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes more than one transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_alternately_spliced_transcripts","synonyms":[{"name":"encodes alternately spliced transcripts","type":"exact"}],"termid":"SO:0000463"}


id: GO:1990593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nascent polypeptide-associated complex, a heterodimeric protein complex that can reversibly bind to ribosomes and is located in direct proximity to newly synthesized polypeptide chains as they emerge from the ribosome.","definition_xrefs":["PMID:25487825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nascent polypeptide-associated complex binding","synonyms":[{"name":"NAC binding","type":"exact"},{"name":"NACA binding","type":"exact"}],"termid":"GO:1990593"}


id: GO:0120324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological, biochemical and genetic changes that induce the differentiation of bloodstream form trypomastigotes into procyclic trypomastigotes in some of the Trypanosomatidae species such as Trypanosoma brucei. This process occurs inside the midgut of the tsetse fly vectors in T. brucei.","definition_xrefs":["GOC:ach","PMID:1698624","PMID:10593184","PMID:3194363","PMID:3194362","PMID:17997129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procyclogenesis","termid":"GO:0120324"}


id: PBO:0050299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 1","termid":"PBO:0050299"}


id: PBO:0060980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGF antisense RNA 1","termid":"PBO:0060980"}


id: MONDO:0004086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelioid cell melanoma that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant ciliary body melanoma","termid":"MONDO:0003912"},{"relation_name":"is_a","term_name":"epithelioid cell uveal melanoma","termid":"MONDO:0006200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ciliary body epithelioid cell melanoma","secondary_identifiers":["DOID:7042","NCIT:C6119","MEDGEN:272484","UMLS:C1333050"],"synonyms":[{"name":"ciliary body epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma of ciliary body","type":"exact"},{"name":"epithelioid cell melanoma of the ciliary body","type":"exact"}],"termid":"MONDO:0004086","xrefs":{"Monarch":{"xref_id":"0004086"}}}


id: GO:0071280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a copper ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to copper ion","termid":"GO:0046688"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to copper ion","synonyms":[{"name":"cellular response to copper","type":"exact"}],"termid":"GO:0071280"}


id: GO:0003844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxyl group in a similar glucan chain.","definition_xrefs":["EC:2.4.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"1,4-alpha-glucan branching enzyme activity","secondary_identifiers":["Reactome:R-HSA-3878762","MetaCyc:GLYCOGEN-BRANCH-RXN","Reactome:R-HSA-3322057","Reactome:R-HSA-3322005","Reactome:R-HSA-3322016"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-alpha-D-(1,4-alpha-D-glucano)-transferase activity","type":"exact"},{"name":"1,4-glucan-6-(1,4-glucano)-transferase activity","type":"exact"},{"name":"Q-enzyme","type":"related"},{"name":"alpha-1,4-glucan:alpha-1,4-glucan-6-glycosyltransferase activity","type":"related"},{"name":"alpha-glucan-branching glycosyltransferase activity","type":"related"},{"name":"amylo-(1,4 to 1,6)transglucosidase activity","type":"related"},{"name":"amylo-(1,4->1,6)-transglycosylase activity","type":"related"},{"name":"amylose isomerase activity","type":"related"},{"name":"branching enzyme activity","type":"related"},{"name":"branching glycosyltransferase activity","type":"related"},{"name":"enzymatic branching factor","type":"related"},{"name":"enzyme Q","type":"related"},{"name":"glucosan transglycosylase activity","type":"related"},{"name":"glycogen branching enzyme activity","type":"related"},{"name":"plant branching enzyme","type":"related"},{"name":"starch branching enzyme","type":"related"}],"termid":"GO:0003844"}


id: GO:0033277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle in which mitosis is begun and progresses normally through the end of anaphase, but not completed, resulting in a cell with increased ploidy.","definition_xrefs":["PMID:9573008","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abortive mitotic cell cycle (obsolete GO:0033277)","synonyms":[{"name":"abortive mitosis","type":"related"}],"termid":"GO:0033277"}


id: MONDO:0000845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic, non-inheritable disorder caused by osteoblastic differentiation defects that result in the replacement of bone marrow and trabecular bone by fibrous stroma and immature bone. It usually affects a single bone and less frequently multiple bones. Skull, femur, tibia, and humerus are the most frequently affected bones. It manifests with pain, deformities, and fractures.","definition_xrefs":["NCIT:C34609"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"bone remodeling disease","termid":"MONDO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrous dysplasia","secondary_identifiers":["Orphanet:249","NORD:1147","GARD:6444","MedDRA:10016664","SCTID:10623005","SCTID:254145001","DOID:0080031","MEDGEN:120444","MESH:D005357","UMLS:C0259779","ICD9:733.29","icd11.foundation:1704766818"],"synonyms":[{"name":"fibrous dysplasia of bone","type":"exact"}],"termid":"MONDO:0000845","xrefs":{"Monarch":{"xref_id":"0000845"}}}


id: MONDO:0019990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-amyloid fibrillary glomerulopathy (non-amyloid FGP) is a rare cause of glomerulonephritis (GN) characterized by glomerular accumulation of non-amyloid fibrils in the mesangium and the glomerular (and rarely tubular) basement membrane, that mainly presents with renal insufficiency, micro-hematuria and nephrotic range proteinuria. Non-amyloid FGP and immunotactoid glomerulopathy (ITG) are often grouped together as pathogenetically related diseases.","definition_xrefs":["Orphanet:97566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunotactoid or fibrillary glomerulopathy","termid":"MONDO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"non-amyloid fibrillary glomerulopathy","secondary_identifiers":["NORD:2024","SCTID:718192000","UMLS:C4273674","MEDGEN:907201","GARD:12740"],"synonyms":[{"name":"Congo red-negative amyloidosis-like glomerulopathy","type":"exact"},{"name":"Fibrillary Glomerulonephritis ","type":"exact"},{"name":"fibrillary glomerulonephritis","type":"related"},{"name":"non-amyloid fibrillary glomerulonephritis","type":"exact"}],"termid":"MONDO:0019990","xrefs":{"Monarch":{"xref_id":"0019990"}}}


id: GO:0008873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = 2-dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase activity","secondary_identifiers":["RHEA:16653","MetaCyc:1.1.1.215-RXN"],"synonyms":[{"name":"2-keto-D-gluconate reductase activity","type":"related"},{"name":"2-ketogluconate reductase activity","type":"related"}],"termid":"GO:0008873"}


id: FYPO:0006267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering and tethering at the nuclear periphery is increased during mitotic metaphase.","definition_xrefs":["PMID:25778919","PomBase:mah","GO:0120109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased telomere clustering and tethering at nuclear periphery during mitotic metaphase","synonyms":[{"name":"decreased mitotic telomere dispersion during metaphase","type":"exact"},{"name":"increased telomere clustering and tethering at nuclear periphery during metaphase of mitotic cell cycle","type":"exact"},{"name":"increased telomere clustering and tethering at nuclear periphery during mitotic metaphase during vegetative growth","type":"exact"},{"name":"increased telomere clustering at nuclear periphery during mitotic metaphase","type":"related"}],"termid":"FYPO:0006267"}


id: PBO:0081473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF346 intronic transcript 1","termid":"PBO:0081473"}


id: GO:0018638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene + H+ + NADH + O2 = 4-methylphenol + H2O + NAD+.","definition_xrefs":["PMID:36593585","RHEA:41380","PMID:15240250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"toluene 4-monooxygenase activity","secondary_identifiers":["EC:1.14.13.236","UM-BBD_enzymeID:r0255"],"termid":"GO:0018638"}


id: PBO:0052937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-1","termid":"PBO:0052937"}


id: PBO:0068934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 177, pseudogene","termid":"PBO:0068934"}


id: MONDO:0009054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive cutis laxa type 2A","termid":"MONDO:0018163"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2, classic type","secondary_identifiers":["UMLS:C5679922","SCTID:73856006","DOID:0070141","MESH:C562632","MEDGEN:1825992","GARD:17546","Orphanet:357074"],"synonyms":[{"name":"ARCL2, Debre type","type":"exact"},{"name":"ARCL2, Debré type","type":"exact"},{"name":"ARCL2, classic type","type":"exact"},{"name":"ARCL2A","type":"related"},{"name":"Arcl2","type":"related"},{"name":"autosomal recessive cutis laxa type 2, Debre type","type":"exact"},{"name":"autosomal recessive cutis laxa type 2, Debré type","type":"exact"},{"name":"autosomal recessive cutis laxa type II classic type","type":"related"}],"termid":"MONDO:0009054","xrefs":{"Monarch":{"xref_id":"0009054"}}}


id: MOD:01819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-succinyl-L-lysine.","definition_xrefs":["PubMed:16582421","PubMed:21151122","RESID:AA0545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-succinyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(3-carboxypropanoyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(3-carboxypropanoyl)azanyl]hexanoic acid","type":"exact"},{"name":"4-[[(5S)-5-amino-6-hydroxy-6-oxohexyl]amino]-4-oxobutanoate","type":"exact"},{"name":"MOD_RES N6-succinyllysine","type":"exact"},{"name":"N(epsilon)-(succinyl)lysine","type":"exact"},{"name":"N6-succinyl-L-lysine","type":"exact"},{"name":"succinyllysine","type":"exact"}],"termid":"MOD:01819"}


id: PBO:0054979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2393","termid":"PBO:0054979"}


id: GO:0098618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-selenomethionine + tRNA(Met) => AMP + diphosphate + selenomethionyl-tRNA(Met).","definition_xrefs":["PMID:16661668","PMID:16661782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0140101","GO:0016874"],"is_obsolete":false,"name":"selenomethionine-tRNA ligase activity","secondary_identifiers":["Reactome:R-HSA-2408546"],"termid":"GO:0098618"}


id: FYPO:0000124
data:
  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id: MONDO:1010789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stiff skin syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stiff skin syndrome, non-human animal","termid":"MONDO:1010147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stiff skin syndrome, dog","secondary_identifiers":["OMIA:002018-9615"],"termid":"MONDO:1010789","xrefs":{"Monarch":{"xref_id":"1010789"}}}


id: MONDO:0009441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive congenital ichthyosis in which the cause of the disease is a mutation in the TGM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 1","secondary_identifiers":["GARD:3170","DOID:0060656","MESH:D017490","UMLS:C4551630","MEDGEN:1635401","OMIM:242300"],"synonyms":[{"name":"ARCI1","type":"exact"},{"name":"LI1","type":"related"},{"name":"autosomal recessive congenital ichthyosis 1","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 1","type":"exact"},{"name":"bathing suit ichthyosis","type":"narrow"},{"name":"collodion baby, self-healing","type":"related"},{"name":"collodion fetus","type":"related"},{"name":"collodion foetus","type":"related"},{"name":"desquamation of newborn","type":"related"},{"name":"ichthyosis congenita","type":"related"},{"name":"ichthyosis congenita 2","type":"related"},{"name":"ichthyosis lamellar 1","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 1","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 1, with bathing suit distribution","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 1","type":"exact"},{"name":"ichthyosis, lamellar, 1","type":"related"},{"name":"ichthyosis, lamellar, 1, formerly","type":"related"},{"name":"lamellar exfoliation of newborn","type":"related"},{"name":"lamellar ichthyosis, type 1","type":"related"}],"termid":"MONDO:0009441","xrefs":{"Monarch":{"xref_id":"0009441"}}}


id: GO:0008446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H2O.","definition_xrefs":["EC:4.2.1.47","RHEA:23820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"GDP-mannose 4,6-dehydratase activity","secondary_identifiers":["Reactome:R-HSA-6787632","MetaCyc:GDPMANDEHYDRA-RXN","KEGG_REACTION:R00888"],"synonyms":[{"name":"GDP-D-mannose 4,6-dehydratase activity","type":"related"},{"name":"GDP-D-mannose dehydratase activity","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase (GDP-4-dehydro-6-deoxy-D-mannose-forming)","type":"related"},{"name":"GDP-mannose 4,6-hydro-lyase activity","type":"related"},{"name":"GDPmannose 4,6-dehydratase activity","type":"related"},{"name":"Gmd","type":"related"},{"name":"guanosine 5'-diphosphate-D-mannose oxidoreductase activity","type":"related"},{"name":"guanosine diphosphomannose 4,6-dehydratase activity","type":"related"},{"name":"guanosine diphosphomannose oxidoreductase activity","type":"related"}],"termid":"GO:0008446"}


id: MONDO:0013466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 13","secondary_identifiers":["MEDGEN:462572","DOID:0080406","OMIM:613857","UMLS:C3151222"],"synonyms":[{"name":"OFC13","type":"exact"},{"name":"orofacial cleft 13","type":"exact"}],"termid":"MONDO:0013466","xrefs":{"Monarch":{"xref_id":"0013466"}}}


id: PBO:0083036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(9) fatty acid desaturase; required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria","termid":"PBO:0083036"}


id: MONDO:0032905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 81, autosomal recessive","secondary_identifiers":["MEDGEN:1711668","OMIM:618768","UMLS:C5394033"],"synonyms":[{"name":"SPASTIC PARAPLEGIA 81, AUTOSOMAL RECESSIVE","type":"related"},{"name":"SPG81","type":"related"}],"termid":"MONDO:0032905","xrefs":{"Monarch":{"xref_id":"0032905"}}}


id: PBO:0062134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 1 pseudogene","termid":"PBO:0062134"}


id: GO:0070120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ciliary neurotrophic factor (CNTF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ciliary neurotrophic factor-mediated signaling pathway","synonyms":[{"name":"CNTF-mediated signaling pathway","type":"exact"},{"name":"ciliary neurotrophic factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0070120"}


id: SO:0001646
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genetic marker, discovered using Diversity Arrays Technology (DArT) technology.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genetic_marker","termid":"SO:0001645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DArT_marker","synonyms":[{"name":"DArT marker","type":"exact"}],"termid":"SO:0001646"}


id: GO:0140409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA 3'-end processing","termid":"GO:0031442"},{"relation_name":"is_a","term_name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"},{"relation_name":"positively_regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA alternative polyadenylation","termid":"GO:0140409"}


id: GO:0051272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.","definition_xrefs":["GOC:dph","GOC:ai","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular component movement (obsolete GO:0051272)","synonyms":[{"name":"positive regulation of cellular component motion","type":"exact"}],"termid":"GO:0051272"}


id: GO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immune response to tumor cell","termid":"GO:0002841"},{"relation_name":"is_a","term_name":"negative regulation of tolerance induction to tumor cell","termid":"GO:0002844"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"},{"relation_name":"is_a","term_name":"negative regulation of peripheral T cell tolerance induction","termid":"GO:0002850"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction to tumor cell","synonyms":[{"name":"down regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of T cell tolerance induction to tumor cell","type":"narrow"}],"termid":"GO:0002847"}


id: PBO:0065299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 3","termid":"PBO:0065299"}


id: GO:0046630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation","synonyms":[{"name":"gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"gamma-delta T-cell proliferation","type":"exact"},{"name":"gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046630"}


id: PBO:0086097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be involved in vacuolar functions; mutant shows defect in CPY processing and fragmented vacuoles; deletion mutant has increased glycogen accumulation and displays elongated buds; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; ENV11 has a paralog, VID22, that arose from the whole genome duplication","termid":"PBO:0086097"}


id: PBO:0029113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_cell_cycle_phase","termid":"PBO:0029113"}


id: FYPO:0006917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of mitosis begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cell cycle phase transition","termid":"FYPO:0006916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal onset of mitotic metaphase/anaphase transition","synonyms":[{"name":"normal duration of metaphase during mitosis","type":"related"},{"name":"normal duration of mitotic metaphase","type":"related"},{"name":"normal onset of metaphase/anaphase transition of mitotic nuclear division","type":"exact"},{"name":"normal timing of mitotic metaphase/anaphase transition","type":"related"}],"termid":"FYPO:0006917"}


id: GO:1905002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane repolarization during atrial cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:TermGenie","PMID:21098446","GOC:mtg_cardiac_conduct_nov11","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization during atrial cardiac muscle cell action potential","termid":"GO:1905000"},{"relation_name":"is_a","term_name":"positive regulation of membrane repolarization during cardiac muscle cell action potential","termid":"GO:1905033"},{"relation_name":"positively_regulates","term_name":"membrane repolarization during atrial cardiac muscle cell action potential","termid":"GO:0098914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane repolarization during atrial cardiac muscle cell action potential","synonyms":[{"name":"activation of atrial repolarization","type":"related"},{"name":"activation of electrocardiogram QRS complex","type":"related"},{"name":"activation of membrane repolarization during atrial cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of atrial repolarization","type":"related"},{"name":"positive regulation of electrocardiogram QRS complex","type":"related"},{"name":"up regulation of atrial repolarization","type":"related"},{"name":"up regulation of electrocardiogram QRS complex","type":"related"},{"name":"up regulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of atrial repolarization","type":"related"},{"name":"up-regulation of electrocardiogram QRS complex","type":"related"},{"name":"up-regulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of atrial repolarization","type":"related"},{"name":"upregulation of electrocardiogram QRS complex","type":"related"},{"name":"upregulation of membrane repolarization during atrial cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1905002"}


id: GO:0032090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Pyrin (PAAD/DAPIN) domain, a protein-protein interaction domain that has the same fold as the Death domain.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Pyrin domain binding","synonyms":[{"name":"DAPIN domain binding","type":"exact"},{"name":"PAAD domain binding","type":"exact"}],"termid":"GO:0032090"}


id: PBO:0049137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 1","termid":"PBO:0049137"}


id: PBO:0108614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 15","termid":"PBO:0108614"}


id: PBO:0063444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6H","termid":"PBO:0063444"}


id: PBO:0080293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 57 pseudogene","termid":"PBO:0080293"}


id: GO:0035568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal proline of proteins.","definition_xrefs":["RESID:AA0419","PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-proline methylation","termid":"GO:0035568"}


id: PBO:0050880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 3","termid":"PBO:0050880"}


id: GO:0098899
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the spine apparatus membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"spine apparatus","termid":"GO:0097444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"spine apparatus lumen","termid":"GO:0098899"}


id: PBO:0067548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 697, pseudogene","termid":"PBO:0067548"}


id: PBO:0077863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 3 pseudogene 4","termid":"PBO:0077863"}


id: PBO:0080850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 3","termid":"PBO:0080850"}


id: GO:0061571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into TDP to produce a TTP.","definition_xrefs":["PMID:23416111","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete TDP phosphorylation (obsolete GO:0061571)","termid":"GO:0061571"}


id: GO:0034690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaD subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"integrin alphaD-beta2 complex","synonyms":[{"name":"Itgad-Itgb2 complex","type":"narrow"},{"name":"alphaD-beta2 integrin complex","type":"exact"}],"termid":"GO:0034690"}


id: PBO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP192 divergent transcript","termid":"PBO:0042795"}


id: PBO:0053180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain containing 3","termid":"PBO:0053180"}


id: MONDO:0800316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete contiguous ABCD1/DXS1375E deletion syndrome (obsolete MONDO:0800316)","termid":"MONDO:0800316","xrefs":{"Monarch":{"xref_id":"0800316"}}}


id: GO:0102909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD + 2-hydroxyglutarate = H+ + 2-oxoglutarate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ketoglutarate reductase activity (NADH-dependent) (obsolete GO:0102909)","termid":"GO:0102909"}


id: GO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid.","definition_xrefs":["RHEA:14709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steroid Delta-isomerase activity","secondary_identifiers":["Reactome:R-HSA-6807052","Reactome:R-HSA-193073","MetaCyc:STEROID-DELTA-ISOMERASE-RXN","EC:5.3.3.1","Reactome:R-HSA-193961","Reactome:R-HSA-193052","Reactome:R-HSA-195690"],"synonyms":[{"name":"3-oxosteroid delta5-delta4-isomerase activity","type":"related"},{"name":"3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-keto steroid isomerase activity","type":"related"},{"name":"delta(5)-3-ketosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-steroid isomerase activity","type":"related"},{"name":"delta5(or delta4)-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-ketosteroid isomerase activity","type":"related"},{"name":"delta5-3-oxosteroid isomerase activity","type":"related"},{"name":"delta5-ketosteroid isomerase activity","type":"related"},{"name":"delta5-steroid isomerase activity","type":"related"},{"name":"hydroxysteroid isomerase activity","type":"related"},{"name":"steroid D-isomerase activity","type":"exact"},{"name":"steroid isomerase activity","type":"related"}],"termid":"GO:0004769"}


id: GO:0005321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete high-density lipoprotein (obsolete GO:0005321)","synonyms":[{"name":"HDL","type":"exact"},{"name":"high-density lipoprotein","type":"exact"}],"termid":"GO:0005321"}


id: _global:acts_upstream_of,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c 'acts upstream of, positive effect' p if c is enables f, and f is causally upstream of p, and the direction of f is positive","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"acts_upstream_of_or_within,_positive_effect","termid":"_global:acts_upstream_of_or_within,_positive_effect"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of,_positive_effect","secondary_identifiers":["RO:0004034"],"termid":"_global:acts_upstream_of,_positive_effect"}


id: GO:0071877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenylate cyclase-inhibiting adrenergic receptor signaling pathway activity. An adrenergic receptor signaling pathway is the series of molecular signals generated as a consequence of an adrenergic receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"adenylate cyclase-inhibiting adrenergic receptor signaling pathway","termid":"GO:0071881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenylate cyclase-inhibiting adrenergic receptor signaling pathway","synonyms":[{"name":"regulation of adrenergic receptor signaling pathway","type":"exact"},{"name":"regulation of adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071877"}


id: FYPO:0001053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis at the same size as wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001985","FYPO:0000004","FYPO:0000641","FYPO:0005447","FYPO:0000631","FYPO:0000257","FYPO:0000032","FYPO:0001320","FYPO:0000337"],"is_obsolete":false,"name":"cut, normal size cell","synonyms":[{"name":"cut following normal onset of mitosis, normal size cell","type":"exact"},{"name":"cut with mitotic catastrophe, normal size cell","type":"related"},{"name":"cut, normal size cell during mitotic cell cycle","type":"related"},{"name":"cut, normal size cell during vegetative growth","type":"exact"},{"name":"septation following abnormal nuclear division, normal size cell","type":"exact"}],"termid":"FYPO:0001053"}


id: PBO:0012061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase predicted to be involved in tRNA threonylcarbamoyladenosine modification Pgp1","termid":"PBO:0012061"}


id: PBO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1 (predicted)","termid":"PBO:0001582"}


id: GO:0070589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a macromolecule that is destined to form part of a specific cellular component.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular component macromolecule biosynthetic process (obsolete GO:0070589)","synonyms":[{"name":"cellular component macromolecule biosynthesis","type":"exact"}],"termid":"GO:0070589"}


id: FYPO:0002478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable and is curved along the long axis, and in which vacuoles are more visible (usually by microscopy) than normal. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable curved vegetative cell","termid":"FYPO:0002112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"viable curved vacuolated vegetative cell","synonyms":[{"name":"curved vacuolated viable cell","type":"exact"},{"name":"viable curved vacuolated cell during vegetative growth","type":"exact"},{"name":"viable curved vacuolated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002478"}


id: GO:0032064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to osmotic stress","termid":"GO:0032062"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational initiation in response to osmotic stress","synonyms":[{"name":"activation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation initiation in response to osmotic stress","type":"exact"}],"termid":"GO:0032064"}


id: GO:0019162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxaloacetate + pyridoxamine = L-aspartate + pyridoxal.","definition_xrefs":["EC:2.6.1.31","RHEA:10844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"pyridoxamine-oxaloacetate transaminase activity","secondary_identifiers":["MetaCyc:PYROXALTRANSAM-RXN","KEGG_REACTION:R01713"],"synonyms":[{"name":"pyridoxamine--oxaloacetate aminotransferase activity","type":"related"},{"name":"pyridoxamine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"pyridoxamine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0019162"}


id: GO:0019835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["UniProtKB-KW:KW-0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis","secondary_identifiers":["Wikipedia:Cytolysis"],"synonyms":[{"name":"autolysin activity","type":"related"},{"name":"bacteriocin activity","type":"related"},{"name":"bacteriolytic toxin activity","type":"related"},{"name":"holin","type":"related"},{"name":"lysin activity","type":"related"},{"name":"lysis","type":"broad"},{"name":"necrosis","type":"related"}],"termid":"GO:0019835"}


id: GO:0120235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["GOC:krc","PMID:32513868","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120235"}


id: MONDO:0008317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolytic capacity of plasma","secondary_identifiers":["MEDGEN:401269","UMLS:C1867621","OMIM:176900"],"synonyms":[{"name":"proteolytic capacity of plasma","type":"exact"}],"termid":"MONDO:0008317","xrefs":{"Monarch":{"xref_id":"0008317"}}}


id: MONDO:0006898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the tissues around a joint. (Dorland, 27th ed)","definition_xrefs":["MESH:D010489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periarthritis","secondary_identifiers":["MedDRA:10034464","MEDGEN:45397","SCTID:50921008","DOID:2964","UMLS:C0031037","EFO:1001097"],"termid":"MONDO:0006898","xrefs":{"Monarch":{"xref_id":"0006898"}}}


id: MONDO:0014796
data:
  {"annotated_genes":["SJAG_16459","SJAG_01229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86146,86147],"is_not":false,"summary":null,"term":"MONDO:0014796"}]},"cv_name":"mondo","definition":"Any young-onset Parkinson disease in which the cause of the disease is a mutation in the VPS13C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01229":null,"SJAG_16459":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive early-onset Parkinson disease 23","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18610","OMIM:616840","DOID:0060896","MEDGEN:896607","UMLS:C4225186"],"synonyms":[{"name":"PARK23","type":"exact"},{"name":"Parkinson disease 23, autosomal recessive early-onset","type":"exact"},{"name":"Parkinson disease 23, autosomal recessive, early onset","type":"exact"},{"name":"VPS13C young-onset Parkinson disease","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease 23","type":"exact"},{"name":"autosomal recessive early-onset Parkinson's disease 23","type":"related"},{"name":"autosomal recessive early-onset Parksinson disease type 23","type":"exact"},{"name":"young-onset Parkinson disease caused by mutation in VPS13C","type":"exact"}],"termid":"MONDO:0014796","terms_by_termid":{"MONDO:0014796":null},"xrefs":{"Monarch":{"xref_id":"0014796"}}}


id: MONDO:0005161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process caused by a human papillomavirus. This infection can cause abnormal tissue growth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human papilloma virus infection","secondary_identifiers":["MEDGEN:87475","DOID:11166","NCIT:C27851","EFO:0001668","UMLS:C0343641","SCTID:240532009","ICD9:079.4"],"synonyms":[{"name":"Human Papillomavirus infection","type":"exact"},{"name":"Human papilloma Virus infection","type":"exact"},{"name":"Human papillomavirus caused disease or disorder","type":"exact"},{"name":"Human papillomavirus disease or disorder","type":"exact"},{"name":"Human papillomavirus infectious disease","type":"exact"}],"termid":"MONDO:0005161","xrefs":{"Monarch":{"xref_id":"0005161"}}}


id: MONDO:0700188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial cell sarcoma occurring in a cat.","definition_xrefs":["NCIT:C181658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline synovial cell sarcoma","termid":"MONDO:0700188","xrefs":{"Monarch":{"xref_id":"0700188"}}}


id: PBO:0082246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate; phosphorylated","termid":"PBO:0082246"}


id: GO:0080042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-glucose + H2O = AMP + glucose-1-phosphate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ADP-sugar diphosphatase activity","termid":"GO:0019144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-glucose pyrophosphohydrolase activity","termid":"GO:0080042"}


id: PBO:0062351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily M member 2 pseudogene","termid":"PBO:0062351"}


id: PR:P0CT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L2-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.13c","secondary_identifiers":["UniProtKB:P0CT70"],"synonyms":[{"name":"K37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"K5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KD4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPL8","type":"exact"}],"termid":"PR:P0CT70"}


id: GO:1903110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-strand break repair via homologous recombination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bhm","PMID:24339919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"regulates","term_name":"single-strand break repair via homologous recombination","termid":"GO:1990396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"regulation of single-strand break repair via homologous recombination","termid":"GO:1903110"}


id: GO:0031947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid metabolic process","termid":"GO:0031944"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"negative regulation of steroid hormone biosynthetic process","termid":"GO:0090032"},{"relation_name":"negatively_regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of glucocorticoid biosynthetic process","synonyms":[{"name":"down regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"down-regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"downregulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"inhibition of glucocorticoid biosynthetic process","type":"narrow"}],"termid":"GO:0031947"}


id: PBO:0054297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1688","termid":"PBO:0054297"}


id: PR:O94564
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A reticulon-4-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc-type alcohol dehydrogenase-like protein C1773.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.06c","secondary_identifiers":["UniProtKB:O94564"],"synonyms":[{"name":"Spom972h-RTN4IP1","type":"exact"}],"termid":"PR:O94564"}


id: PBO:0003651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"random septum position protein Rsp1","termid":"PBO:0003651"}


id: GO:0030846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA polymerase II transcription termination process in which cleavage and polyadenylylation of the mRNA 3' end are coupled to transcription termination.","definition_xrefs":["PMID:18679429","PMID:27371117","GOC:txnOH","PMID:12944462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:0030846"}


id: MONDO:1012876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in rhesus monkeys due to a mutation in the PINK1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, PINK1-related, rhesus monkey","secondary_identifiers":["OMIA:002361-9544"],"termid":"MONDO:1012876","xrefs":{"Monarch":{"xref_id":"1012876"}}}


id: MOD:01104
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-methoxy-2,3,6-trimethylbenzenesulfonyl","synonyms":[{"name":"Mtr","type":"exact"}],"termid":"MOD:01104"}


id: MONDO:0035660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1-related developmental delay-seizures-movement disorder spectrum","secondary_identifiers":["Orphanet:592564","GARD:22369","ICD10CM:F84.8","UMLS:C5680303","MEDGEN:1830103"],"synonyms":[{"name":"GNAO1-related spectrum","type":"exact"}],"termid":"MONDO:0035660","xrefs":{"Monarch":{"xref_id":"0035660"}}}


id: PBO:0069497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 764, pseudogene","termid":"PBO:0069497"}


id: PBO:0012543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_on_population_of","termid":"PBO:0012543"}


id: GO:0097723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of an amoeboid sperm cell.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amoeboid sperm motility","synonyms":[{"name":"ameboid sperm motility","type":"exact"},{"name":"ameboid sperm movement","type":"exact"},{"name":"amoeboid sperm movement","type":"exact"}],"termid":"GO:0097723"}


id: PBO:0002374
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rothmund-Thomsom syndrome","termid":"PBO:0002374"}


id: PBO:0080777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 8","termid":"PBO:0080777"}


id: PBO:0027010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_G2_phase","termid":"PBO:0027010"}


id: GO:0010044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aluminum ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to aluminum ion","synonyms":[{"name":"response to aluminium ion","type":"exact"},{"name":"response to aluminum","type":"exact"}],"termid":"GO:0010044"}


id: PBO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3A","termid":"PBO:0042697"}


id: PBO:0058320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4693","termid":"PBO:0058320"}


id: FYPO:0006302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which changes in contacts within a chromosome arm that normally take place during mitosis do not occur.","definition_xrefs":["PomBase:mah","PMID:28825727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome condensation","termid":"FYPO:0000214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0000337","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished intra-arm chromosome contact change during mitosis","synonyms":[{"name":"abolished changes in intra-arm contacts in mitosis","type":"exact"},{"name":"abolished intra-arm chromosome contact change during M phase of mitotic cell cycle","type":"related"},{"name":"abolished intra-arm chromosome contact change during mitosis during vegetative growth","type":"exact"},{"name":"intra-arm chromosome contact change abolished during mitosis","type":"exact"}],"termid":"FYPO:0006302"}


id: PBO:0062732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 6","termid":"PBO:0062732"}


id: PBO:0087846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase I; nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination; role in processing ribonucleoside monophosphates in genomic DNA into irreversible single-strand breaks; enzymatic activity and interaction with Nsr1p are negatively regulated by polyphosphorylation","termid":"PBO:0087846"}


id: GO:1900120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:signaling","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor binding","synonyms":[{"name":"regulation of receptor ligand","type":"narrow"}],"termid":"GO:1900120"}


id: PBO:0071004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 6","termid":"PBO:0071004"}


id: PBO:0041920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBR3 antisense RNA 1","termid":"PBO:0041920"}


id: GO:0071741
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and bound via a GPI-anchor to the plasma membrane of B cells.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgD immunoglobulin complex","termid":"GO:0071738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgD immunoglobulin complex, GPI-anchored","synonyms":[{"name":"GPI-anchored IgD","type":"exact"}],"termid":"GO:0071741"}


id: GO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell antigen processing and presentation","termid":"GO:0002606"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of myeloid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of myeloid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of myeloid dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002609"}


id: PBO:0087829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIIB B-related factor; one of three subunits of RNA polymerase III transcription initiation factor TFIIIB, binds TFIIIC and TBP and recruits RNA pol III to promoters, amino-terminal half is homologous to TFIIB; mutations in human homolog are associated with autosomal recessive cerebellar-facial-dental syndrome","termid":"PBO:0087829"}


id: PBO:0086866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway; SKS1 has a paralog, VHS1, that arose from the whole genome duplication","termid":"PBO:0086866"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["PMID:15840053","GOC:dph","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: GO:0047113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a quinone + an aldehyde + H2O = a carboxylate + a quinol + H+.","definition_xrefs":["RHEA:13881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aldehyde dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.2.5.2","MetaCyc:1.2.99.3-RXN"],"synonyms":[{"name":"aldehyde dehydrogenase (acceptor) activity","type":"related"},{"name":"aldehyde dehydrogenase (pyrroloquinoline-quinone)","type":"related"},{"name":"aldehyde:(pyrroloquinoline-quinone) oxidoreductase activity","type":"related"}],"termid":"GO:0047113"}


id: PBO:0017006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain (predicted)","termid":"PBO:0017006"}


id: GO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral budding which uses a host ESCRT protein complex, or complexes, to mediate the budding process.","definition_xrefs":["UniProtKB-KW:KW-1187","VZ:1536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding via host ESCRT complex","synonyms":[{"name":"host-assisted viral budding","type":"broad"},{"name":"viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:0039702"}


id: FYPO:0002113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable curved vegetative cell","synonyms":[{"name":"curved inviable cell","type":"exact"},{"name":"inviable curved cell","type":"exact"},{"name":"inviable curved cell during vegetative growth","type":"exact"},{"name":"inviable curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved vegetative cell","type":"exact"}],"termid":"FYPO:0002113"}


id: PBO:0045776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial cell surface expressed chemotaxis and apoptosis regulator","termid":"PBO:0045776"}


id: PBO:0057694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1283-2","termid":"PBO:0057694"}


id: PR:000050481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2-specific protein kinase fin1 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-377, Ser-526, and Ser-698 of the amino acid sequence represented by UniProtKB:O13839. Example: UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22684255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe)","termid":"PR:000050480"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fin1/Phos(S377,S526,S698)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"PomBase_original_PRO_term_name: G2-specific protein kinase fin1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-fin1/Phos:1","type":"exact"},{"name":"UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046","type":"narrow"},{"name":"fin1/Phos(S377,S526,S698)","type":"exact"}],"termid":"PR:000050481"}


id: GO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"}


id: GO:0005462
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77956],"is_not":false,"summary":null,"term":"GO:0005462"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a UDP-N-acetylglucosamine from one side of a membrane to the other. N-acetylglucosamine is a substance composed of N-acetylglucosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-742354","Reactome:R-HSA-5653622","Reactome:R-HSA-741450"],"termid":"GO:0005462","terms_by_termid":{"GO:0005462":null}}


id: PBO:0061130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor","termid":"PBO:0061130"}


id: PBO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 23","termid":"PBO:0070844"}


id: MONDO:0009461
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85520],"is_not":false,"summary":null,"term":"MONDO:0009461"}]},"cv_name":"mondo","definition":"Male infertility due to large-headed multiflagellar polypoid spermatozoa is a male infertility due to sperm disorder characterized by the presence, in sperm, of a very high percentage of spermatozoa with enlarged head, irregular head shape, multiple flagella, and abnormal midpiece and acrosome. It is generally associated with severe oligoasthenozoospermia and a high rate of sperm chromosomal abnormalities (polyploidy, aneuploidy).","definition_xrefs":["Orphanet:137893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"male infertility with teratozoospermia due to single gene mutation","termid":"MONDO:0018394"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0403812","DOID:0070183","MEDGEN:98020","MESH:C562903","SCTID:236806004","GARD:12385","OMIM:243060"],"synonyms":[{"name":"SPGF5","type":"related"},{"name":"infertility associated with multi-tailed spermatozoa and excessive DNA","type":"related"},{"name":"infertility associated with multitailed spermatozoa and excessive DNA","type":"related"},{"name":"macrocephalic sperm head syndrome","type":"exact"},{"name":"macrozoospermia","type":"related"},{"name":"male infertility due to large-headed multiflagellar polyploid spermatozoa","type":"exact"},{"name":"male infertility due to macrozoospermia","type":"exact"},{"name":"male infertility with large-headed, multiflagellar, polyploid spermatozoa","type":"exact"},{"name":"spermatogenic failure 5","type":"exact"},{"name":"spermatogenic failure type 5","type":"exact"}],"termid":"MONDO:0009461","terms_by_termid":{"MONDO:0009461":null},"xrefs":{"Monarch":{"xref_id":"0009461"}}}


id: MONDO:0017563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital patella dislocation","termid":"MONDO:0017471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital patella dislocation, bilateral","secondary_identifiers":["UMLS:C5437898","Orphanet:295237","icd11.foundation:1604828649","MEDGEN:1741152"],"termid":"MONDO:0017563","xrefs":{"Monarch":{"xref_id":"0017563"}}}


id: GO:1903107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any insulin receptor signaling pathway that is involved in dauer larval development.","definition_xrefs":["PMID:19853560","GOC:TermGenie","GOC:kmv","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin receptor signaling pathway involved in dauer larval development (obsolete GO:1903107)","synonyms":[{"name":"daf-2 receptor signaling pathway involved in dauer larval development","type":"narrow"},{"name":"insulin receptor signalling pathway involved in dauer larval development","type":"exact"}],"termid":"GO:1903107"}


id: PBO:0055615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3054","termid":"PBO:0055615"}


id: PBO:0074337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2","termid":"PBO:0074337"}


id: GO:2000685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to X-ray.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to X-ray","termid":"GO:2000683"},{"relation_name":"positively_regulates","term_name":"cellular response to X-ray","termid":"GO:0071481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to X-ray","synonyms":[{"name":"positive regulation of cellular response to X-ray radiation stimulus","type":"exact"}],"termid":"GO:2000685"}


id: PBO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC family iron transporter Atm1","termid":"PBO:0002170"}


id: MONDO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine phosphorylase deficiency, immune defect due to","secondary_identifiers":["UMLS:C1855737","MESH:C565465","OMIM:243080","MEDGEN:344562"],"synonyms":[{"name":"inosine phosphorylase deficiency, immune defect due to","type":"exact"}],"termid":"MONDO:0009462","xrefs":{"Monarch":{"xref_id":"0009462"}}}


id: PBO:0039521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 2","termid":"PBO:0039521"}


id: PBO:0030602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_alpha-glucosidase_activity","termid":"PBO:0030602"}


id: PBO:0041335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 14","termid":"PBO:0041335"}


id: GO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung vasculature development","synonyms":[{"name":"pulmonary vasculature development","type":"exact"}],"termid":"GO:0060426"}


id: PBO:0075252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 4","termid":"PBO:0075252"}


id: PBO:0076157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 1","termid":"PBO:0076157"}


id: GO:0003944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein N-acetyl-D-glucosaminyl-phospho-D-mannose + H2O = N-acetyl-D-glucosamine + glycoprotein phospho-D-mannose.","definition_xrefs":["EC:3.1.4.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase activity","secondary_identifiers":["RHEA:24372","MetaCyc:3.1.4.45-RXN"],"synonyms":[{"name":"2-acetamido-2-deoxy-alpha-D-glucose 1-phosphodiester acetamidodeoxyglucohydrolase activity","type":"related"},{"name":"alpha-N-acetyl-D-glucosamine-1-phosphodiester N-acetylglucosaminidase activity","type":"related"},{"name":"alpha-N-acetylglucosaminyl phosphodiesterase activity","type":"related"},{"name":"glycoprotein-N-acetyl-D-glucosaminyl-phospho-D-mannose N-acetyl-D-glucosaminylphosphohydrolase activity","type":"related"},{"name":"lysosomal alpha-N-acetylglucosaminidase activity","type":"narrow"},{"name":"phosphodiester glycosidase activity","type":"related"}],"termid":"GO:0003944"}


id: PBO:0039743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L5","termid":"PBO:0039743"}


id: GO:0009931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Calcium-dependent catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; and ATP + a protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0003824","GO:0016301","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine kinase activity","termid":"GO:0009931"}


id: GO:1904841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TORC2 complex.","definition_xrefs":["PMID:20660630","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TORC2 complex binding","synonyms":[{"name":"TOR complex 2 binding","type":"exact"},{"name":"TORC 2 complex binding","type":"exact"},{"name":"TORC2 binding","type":"exact"},{"name":"mTORC2 binding","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex binding","type":"exact"}],"termid":"GO:1904841"}


id: MOD:00478
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to L-glutamyl semialdehyde.","definition_xrefs":["DeltaMass:354","PubMed:2563380","PubMed:11120890","Unimod:35#P","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"glutamyl semialdehyde","termid":"MOD:01440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamyl semialdehyde (Pro)","synonyms":[{"name":"Oxidation","type":"related"},{"name":"Oxidation of proline to gamma-glutamyl semialdehyde","type":"exact"},{"name":"Oxidation or Hydroxylation","type":"related"},{"name":"gamma-glutamyl semialdehyde","type":"exact"},{"name":"glutamyl 5-semialdehyde","type":"exact"},{"name":"glutamyl aldehyde","type":"exact"}],"termid":"MOD:00478"}


id: SO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Epoxyqueuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxyqueuosine","secondary_identifiers":["RNAMOD:044"],"synonyms":[{"name":"eQ","type":"exact"}],"termid":"SO:0001318"}


id: MONDO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bilirubin, serum level of, quantitative trait locus 1 (obsolete MONDO:0044270)","secondary_identifiers":["OMIM:601816"],"synonyms":[{"name":"BILIQTL1","type":"related"},{"name":"bilirubin, serum level OF, quantitative trait locus 1","type":"related"},{"name":"bilirubin, serum level of, QTL1","type":"exact"}],"termid":"MONDO:0044270","xrefs":{"Monarch":{"xref_id":"0044270"}}}


id: MONDO:0700127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 21 characterized by the presence of an extra chromosome 21 in some of the cells of the organism.","definition_xrefs":["PMID:29218069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisomy 21","termid":"MONDO:0700126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 21","secondary_identifiers":["UMLS:C2931324","MEDGEN:419386"],"termid":"MONDO:0700127","xrefs":{"Monarch":{"xref_id":"0700127"}}}


id: PBO:0053114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 1","termid":"PBO:0053114"}


id: GO:1905962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glutamatergic neuron.","definition_xrefs":["PMID:24030726","GO_REF:0000086","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glutamatergic neuron differentiation","termid":"GO:1905962"}


id: PBO:0083622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3-binding protein of the mitochondrial pyruvate dehydrogenase complex; plays a structural role in the complex by binding and positioning dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide acetyltransferase (E2) core","termid":"PBO:0083622"}


id: PBO:0017439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_translation_of","termid":"PBO:0017439"}


id: MONDO:0958335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 1","termid":"MONDO:0019572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 1d","secondary_identifiers":["OMIM:620780","UMLS:C5935602","MEDGEN:1857168"],"termid":"MONDO:0958335","xrefs":{"Monarch":{"xref_id":"0958335"}}}


id: FYPO:0004627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes two or more rounds of cell division during which chromosomes are broken during mitotic chromosome segregation, and then dies.","definition_xrefs":["PomBase:al","PMID:10572171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, chromosome fragmentation upon segregation","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, chromosome fragmentation upon segregation","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, chromosome fragmentation upon segregation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, chromosome fragmentation upon segregation","type":"exact"}],"termid":"FYPO:0004627"}


id: PR:O42649
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR18937:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.09c","secondary_identifiers":["UniProtKB:O42649"],"synonyms":[{"name":"SPAC10F6.09c","type":"related"},{"name":"Spom972h-SMC3","type":"exact"},{"name":"cohesin complex Psm3 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"smc3","type":"related"}],"termid":"PR:O42649"}


id: PBO:0057002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 95","termid":"PBO:0057002"}


id: FYPO:0003273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing nitrite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on nitrite","synonyms":[{"name":"normal cell population growth in presence of nitrite","type":"exact"},{"name":"normal cell population growth on nitrite","type":"exact"},{"name":"normal cell population growth on nitrite ion","type":"exact"},{"name":"normal cellular response to nitrite","type":"related"},{"name":"normal growth on nitrite ions","type":"exact"},{"name":"normal vegetative cell population growth on nitrite","type":"exact"}],"termid":"FYPO:0003273"}


id: MONDO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic fasciitis is a rare connective tissue disease that is characterized by inflammation and thickening of the fascia, usually associated with peripheral eosinophilia. It presents during adulthood with symmetrical and painful swelling of mainly the extremities that progressively become indurated. Fatigue, disabling cutaneous fibrosis, myositis and arthritis may also be observed.","definition_xrefs":["Orphanet:3165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"},{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"eosinophilic fasciitis","secondary_identifiers":["HP:0045029","ICD9:728.89","UMLS:C0264005","GARD:6351","MedDRA:10014954","icd11.foundation:1977389237","MEDGEN:82673","SCTID:24129002","MESH:C562487","NCIT:C112116","OMIM:226350"],"synonyms":[{"name":"EF","type":"related"},{"name":"Shulman syndrome","type":"exact"},{"name":"diffuse fasciitis with eosinophilia","type":"exact"},{"name":"eosinophilic fasciitis","type":"exact"},{"name":"eosinophilic fasciitis (disease)","type":"exact"}],"termid":"MONDO:0009175","xrefs":{"Monarch":{"xref_id":"0009175"}}}


id: PBO:0042173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 3","termid":"PBO:0042173"}


id: MONDO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyloidosis (obsolete MONDO:0004711)","synonyms":[{"name":"obsolete amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0004711","xrefs":{"Monarch":{"xref_id":"0004711"}}}


id: MONDO:0010380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, ataxia, short stature, and intellectual disability","secondary_identifiers":["OMIM:300619","MESH:C535345","UMLS:C1845094","MEDGEN:375579"],"synonyms":[{"name":"Casm syndrome","type":"related"},{"name":"cataract, ataxia, short stature, and intellectual disability","type":"exact"},{"name":"cataract, ataxia, short stature, and mental retardation","type":"exact"},{"name":"cataracts, ataxia, short stature, and intellectual disability","type":"related"},{"name":"cataracts, ataxia, short stature, and mental retardation","type":"related"}],"termid":"MONDO:0010380","xrefs":{"Monarch":{"xref_id":"0010380"}}}


id: GO:0050843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-adenosylmethionine catabolic process","synonyms":[{"name":"S-adenosyl methionine catabolic process","type":"exact"},{"name":"S-adenosyl methionine catabolism","type":"exact"},{"name":"S-adenosylmethionine breakdown","type":"exact"},{"name":"S-adenosylmethionine catabolism","type":"exact"},{"name":"S-adenosylmethionine degradation","type":"exact"},{"name":"SAM catabolic process","type":"exact"}],"termid":"GO:0050843"}


id: GO:0061179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the regulated release of insulin that contributes to the response of a cell to glucose.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of insulin secretion","termid":"GO:0046676"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0061178"},{"relation_name":"negatively_regulates","term_name":"insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0035773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"negative regulation of insulin secretion in response to glucose","type":"related"},{"name":"negative regulation of insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0061179"}


id: GO:0072715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a selenite ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to selenite ion","termid":"GO:0072714"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to selenite ion","termid":"GO:0072715"}


id: GO:2000086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"positive regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000086"}


id: PBO:0034420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_commitment_to","termid":"PBO:0034420"}


id: PBO:0075626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 3","termid":"PBO:0075626"}


id: PR:O14342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cactin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02969","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.12c","secondary_identifiers":["UniProtKB:O14342"],"synonyms":[{"name":"Spom972h-CACTIN","type":"exact"}],"termid":"PR:O14342"}


id: PBO:0039055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 4","termid":"PBO:0039055"}


id: GO:0010070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of the zygote into two daughter cells that will adopt developmentally distinct potentials.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygote asymmetric cell division","synonyms":[{"name":"zygote asymmetric cytokinesis","type":"related"}],"termid":"GO:0010070"}


id: PBO:0073745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 3 pseudogene 1","termid":"PBO:0073745"}


id: PBO:0029202
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_micafungin","termid":"PBO:0029202"}


id: PBO:0056490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC associated zinc finger protein","termid":"PBO:0056490"}


id: GO:0043500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["PMID:11449884","PMID:12605307","GOC:mtg_muscle","PMID:11181628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"},{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle adaptation","synonyms":[{"name":"muscle plasticity","type":"related"}],"termid":"GO:0043500"}


id: MONDO:0008312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malocclusion in which the mandible is anterior to the maxilla as reflected by the first relationship of the first permanent molar (mesioclusion).","definition_xrefs":["MESH:D008313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant prognathism","secondary_identifiers":["GARD:10319","OMIM:176700","UMLS:C0399526","MEDGEN:98316","Orphanet:2964"],"synonyms":[{"name":"'Habsburg jaw'","type":"related"},{"name":"'Hapsburg jaw'","type":"related"},{"name":"Habsburg jaw","type":"related"},{"name":"Hapsburg jaw","type":"related"},{"name":"prognathism mandibular","type":"related"},{"name":"prognathism, mandibular","type":"related"}],"termid":"MONDO:0008312","xrefs":{"Monarch":{"xref_id":"0008312"}}}


id: PBO:0046382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EOGT divergent transcript","termid":"PBO:0046382"}


id: FYPO:0001254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two or more nuclei and more than one septum, and the septa are grouped together between two compartments, one or more of which may contain multiple nuclei.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell, septa grouped","termid":"FYPO:0002002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"multinucleate multiseptate vegetative cell, septa grouped","synonyms":[{"name":"multinucleate multiseptate cell, septa grouped during mitotic cell cycle","type":"related"},{"name":"multinucleate multiseptate cell, septa grouped during vegetative growth","type":"exact"}],"termid":"FYPO:0001254"}


id: SO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeated sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_component","synonyms":[{"name":"repeat component","type":"exact"}],"termid":"SO:0000840"}


id: GO:0034438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a lipoprotein by oxidation of one or more amino acids in the protein.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein amino acid oxidation (obsolete GO:0034438)","termid":"GO:0034438"}


id: FYPO:0004779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal farnesyltranstransferase activity","termid":"FYPO:0004779"}


id: PBO:0018018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine kinase Thr1 (predicted)","termid":"PBO:0018018"}


id: GO:0075165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075165)","synonyms":[{"name":"regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075165"}


id: GO:0051019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitogen-activated protein kinase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"mitogen-activated protein kinase binding","synonyms":[{"name":"MAP kinase binding","type":"exact"},{"name":"MAP-kinase anchoring activity","type":"related"},{"name":"MAPK binding","type":"exact"}],"termid":"GO:0051019"}


id: GO:0140253
data:
  {"annotated_genes":["SJAG_02989"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99304],"is_not":false,"summary":null,"term":"GO:0140253"}]},"cv_name":"biological_process","definition":"A cellular process in which two or more cells combine together, their plasma membrane fusing, producing a single cell. In some cases, nuclei fuse, producing a polyploid cell, while in other cases, nuclei remain separate, producing a syncytium.","definition_xrefs":["Wikipedia:Cell_fusion"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02989":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell cell fusion","type":"exact"},{"name":"cell fusion","type":"broad"}],"termid":"GO:0140253","terms_by_termid":{"GO:0140253":null}}


id: GO:0061960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, or rate of heme oxygenase activity.","definition_xrefs":["GOC:rph","GOC:BHF_miRNA","PMID:24844779","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heme oxygenase activity (obsolete GO:0061960)","termid":"GO:0061960"}


id: SO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Posttranslationally formed amino acid bonds.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001087 cross_link (obsolete SO:0001087)","synonyms":[{"name":"cross link","type":"exact"},{"name":"crosslink","type":"related"}],"termid":"SO:0001087"}


id: PBO:0055702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLPH pseudogene 1","termid":"PBO:0055702"}


id: PBO:0084418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major CTP synthase isozyme (see also URA8); catalyzes the ATP-dependent transfer of the amide nitrogen from glutamine to UTP, forming CTP, the final step in de novo biosynthesis of pyrimidines; involved in phospholipid biosynthesis; capable of forming cytoplasmic filaments termed cytoophidium, especially during conditions of glucose depletion; URA7 has a paralog, URA8, that arose from the whole genome duplication","termid":"PBO:0084418"}


id: PBO:0013099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP core protein Smg1","termid":"PBO:0013099"}


id: GO:0047515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [oligomeric (1->3)-beta-D-glucosyl](n) + phosphate = [(1->3)-beta-D-glucosyl](n-1) + alpha-D-glucose 1-phosphate.","definition_xrefs":["MetaCyc:13-BETA-OLIGOGLUCAN-PHOSPHORYLASE-RXN","EC:2.4.1.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"1,3-beta-oligoglucan phosphorylase activity","secondary_identifiers":["RHEA:16041"],"synonyms":[{"name":"1,3-beta-D-oligoglucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"beta-1,3-oligoglucan phosphorylase activity","type":"related"},{"name":"beta-1,3-oligoglucan:orthophosphate glucosyltransferase II activity","type":"related"}],"termid":"GO:0047515"}


id: PBO:0036142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_iron","termid":"PBO:0036142"}


id: GO:1904790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF_telomere","GOC:BHF","GOC:TermGenie","PMID:24270157","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of shelterin complex assembly","synonyms":[{"name":"regulation of Pot1 complex assembly","type":"exact"},{"name":"regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"regulation of shelterin complex formation","type":"exact"},{"name":"regulation of telosome assembly","type":"exact"}],"termid":"GO:1904790"}


id: MONDO:0000021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short-rib thoracic dysplasia (obsolete MONDO:0000021)","termid":"MONDO:0000021","xrefs":{"Monarch":{"xref_id":"0000021"}}}


id: FYPO:0005461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule-based movement is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement","termid":"FYPO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule-based movement during vegetative growth","synonyms":[{"name":"abnormal microtubule-based movement during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005461"}


id: PBO:0006981
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative Regulator of Condensin","termid":"PBO:0006981"}


id: PBO:0067878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 180","termid":"PBO:0067878"}


id: MONDO:0003800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma characterized by the presence of necrotic changes and in some cases high mitotic activity.","definition_xrefs":["NCIT:C9425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma, malignant","termid":"MONDO:0009330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conventional malignant hemangiopericytoma","secondary_identifiers":["UMLS:C1333158","MEDGEN:232395","DOID:6197"],"synonyms":[{"name":"conventional malignant hemangiopericytoma","type":"exact"}],"termid":"MONDO:0003800","xrefs":{"Monarch":{"xref_id":"0003800"}}}


id: GO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The catalytic sector of the plasma membrane hydrogen-transporting ATP synthase; it comprises the catalytic core and central stalk, and is peripherally associated with the plasma membrane when the entire ATP synthase is assembled. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mah","PMID:10838056","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) (obsolete GO:0045262)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F1 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, catalytic core F(1)","type":"broad"}],"termid":"GO:0045262"}


id: GO:0016913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of follicle-stimulating hormone (FSH), a gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland. Upon receptor binding, FSH stimulates growth of Graafian follicles in the ovaries in females, and stimulates the epithelium of the seminiferous tubules to increase spermatogenesis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"positively_regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0140677","GO:0005488","GO:0005515","GO:0003674","GO:0038023","GO:0098772"],"is_obsolete":false,"name":"follicle-stimulating hormone activity","synonyms":[{"name":"FSH activity","type":"exact"},{"name":"follicle stimulating hormone activity","type":"exact"},{"name":"follitropin activity","type":"exact"}],"termid":"GO:0016913"}


id: PBO:0053626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 670","termid":"PBO:0053626"}


id: FYPO:0007621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal when the cell is subject to oxidative stress. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"increased protein-protein interaction during cellular response to oxidative stress","synonyms":[{"name":"increased protein binding during cellular response to oxidative stress","type":"exact"},{"name":"increased protein-protein interaction during oxidative stress response","type":"exact"}],"termid":"FYPO:0007621"}


id: PBO:0067601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 764, pseudogene","termid":"PBO:0067601"}


id: MONDO:0971172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, brain anomalies, distinctive facies, and absent language","secondary_identifiers":["UMLS:C5935628","OMIM:620851","Orphanet:686488","MEDGEN:1854654"],"synonyms":[{"name":"NEDHAFA","type":"exact"},{"name":"RENU","type":"exact"},{"name":"RNU4-2-related neurodevelopmental disorder-facial dysmorphism-white matter abnormalities-short stature syndrome","type":"exact"},{"name":"RNU4-2-related neurodevelopmental syndrome","type":"exact"},{"name":"ReNU syndrome","type":"exact"}],"termid":"MONDO:0971172","xrefs":{"Monarch":{"xref_id":"0971172"}}}


id: PBO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght1","termid":"PBO:0018112"}


id: PBO:0062691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 2","termid":"PBO:0062691"}


id: PR:O14010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.07","synonyms":[{"name":"Spom972h-srb6","type":"exact"},{"name":"mediator complex subunit 22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 6 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14010"}


id: GO:0047529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-2,3-dimethylmalate = propanoate + pyruvate.","definition_xrefs":["RHEA:10472","EC:4.1.3.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2,3-dimethylmalate lyase activity","secondary_identifiers":["KEGG_REACTION:R01355","MetaCyc:23-DIMETHYLMALATE-LYASE-RXN"],"synonyms":[{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase (propanoate-forming)","type":"related"},{"name":"(2R,3S)-2,3-dimethylmalate pyruvate-lyase activity","type":"related"},{"name":"2,3-dimethylmalate pyruvate-lyase activity","type":"related"}],"termid":"GO:0047529"}


id: MONDO:0006094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor (small round blue cell tumor) of the thorax which can involve the periosteum, thoracic wall and/or pleura though it spares the lung parenchyma.","definition_xrefs":["NCIT:C7542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"peripheral primitive neuroectodermal tumor","termid":"MONDO:0018271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Askin tumor","secondary_identifiers":["EFO:1000095","ICDO:9365/3","DOID:0050608","MESH:C563168","UMLS:C0877849","MEDGEN:209112"],"synonyms":[{"name":"Askin tumor","type":"exact"},{"name":"Askin's tumor","type":"exact"},{"name":"Askin's tumour","type":"exact"},{"name":"PNET of thoracopulmonary region","type":"exact"},{"name":"peripheral neuroectodermal tumor of thoracopulmonary region","type":"exact"},{"name":"peripheral neuroectodermal tumour of thoracopulmonary region","type":"exact"},{"name":"small cell tumor of thoracopulmonary region","type":"exact"},{"name":"small cell tumour of thoracopulmonary region","type":"exact"}],"termid":"MONDO:0006094","xrefs":{"Monarch":{"xref_id":"0006094"}}}


id: GO:0016493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:signaling","PMID:8662823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C chemokine receptor activity","termid":"GO:0016493"}


id: GO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a chemoattractant and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled chemoattractant receptor activity","synonyms":[{"name":"G protein chemoattractant receptor activity","type":"exact"},{"name":"G-protein chemoattractant receptor activity","type":"exact"},{"name":"G-protein coupled chemoattractant receptor activity","type":"exact"}],"termid":"GO:0001637"}


id: FYPO:0001907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize thiamine, and therefore requires thiamine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"growth auxotrophic for thiamine","synonyms":[{"name":"growth auxotrophic for thiamin","type":"exact"},{"name":"growth auxotrophic for thiamine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for thiamine during vegetative growth","type":"exact"},{"name":"growth auxotrophic for vitamin B1","type":"exact"},{"name":"thiamine auxotrophy","type":"exact"}],"termid":"FYPO:0001907"}


id: MONDO:0010655
data:
  {"annotated_genes":["SJAG_00156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85406],"is_not":false,"summary":null,"term":"MONDO:0010655"}]},"cv_name":"mondo","definition":"The Lujan-Fryns syndrome or X-linked mental retardation (XLMR) with marfanoid habitus syndrome is a syndromic X-linked form of intellectual disability, associated with tall, marfanoid stature, distinct facial dysmorphism and behavioral problems.","definition_xrefs":["Orphanet:776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"MED12-related intellectual disability syndrome","termid":"MONDO:0100000"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability with marfanoid habitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:309520","UMLS:C0796022","GARD:3307","MESH:C537724","SCTID:422437002","DOID:0080985","MEDGEN:167096"],"synonyms":[{"name":"LUJAN-Fryns syndrome","type":"related"},{"name":"Lujan syndrome","type":"exact"},{"name":"Lujan-Fryns syndrome","type":"exact"},{"name":"Lujan-Fryns syndrome, X-linked recessive","type":"exact"},{"name":"Marfanoid habitus, mild general hypotonia, hypernasal voice, normal testicular size and distinct craniofacial anomalies","type":"related"},{"name":"intellectual disability, X-linked, with Marfanoid habitus","type":"related"},{"name":"mental retardation, X-linked, with Marfanoid habitus","type":"related"}],"termid":"MONDO:0010655","terms_by_termid":{"MONDO:0010655":null},"xrefs":{"Monarch":{"xref_id":"0010655"}}}


id: MONDO:0003671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myocardial infarction (disease) that involves the cardiac septum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"septal myocardial infarction","secondary_identifiers":["DOID:5846","MEDGEN:148176","UMLS:C0746727"],"synonyms":[{"name":"cardiac septum myocardial infarction (disease)","type":"exact"},{"name":"myocardial infarction (disease) of cardiac septum","type":"exact"}],"termid":"MONDO:0003671","xrefs":{"Monarch":{"xref_id":"0003671"}}}


id: PBO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 3","termid":"PBO:0071975"}


id: PBO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 12","termid":"PBO:0070742"}


id: GO:0031334
data:
  {"annotated_genes":["SJAG_00766","SJAG_01771","SJAG_03048","SJAG_00973","SJAG_01837","SJAG_00718","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116972,102692,89990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[88556,106017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001178"},{"annotations":[79924,90049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein complex assembly.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_00766":null,"SJAG_00973":null,"SJAG_01771":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"positive regulation of protein-containing complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein complex assembly","type":"narrow"},{"name":"positive regulation of protein complex assembly","type":"related"},{"name":"stimulation of protein complex assembly","type":"narrow"},{"name":"up regulation of protein complex assembly","type":"exact"},{"name":"up-regulation of protein complex assembly","type":"exact"},{"name":"upregulation of protein complex assembly","type":"exact"}],"termid":"GO:0031334","terms_by_termid":{"GO:0045899":null,"GO:1905561":null,"GO:2001178":null}}


id: PBO:0012045
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase activity of Mcm4/6/7 complex requires 5' overhang","termid":"PBO:0012045"}


id: PBO:0088356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase","termid":"PBO:0088356"}


id: GO:0032994
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein and lipid molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-lipid complex","termid":"GO:0032994"}


id: PBO:0068483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 64, pseudogene","termid":"PBO:0068483"}


id: MONDO:0006271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade osteosarcoma arising from the medullary portion of the bone. It affects the long bones and is characterized by the presence of fibroblastic stroma and osteoid production. Pain and swelling are the usual sign and symptom. The prognosis is more favorable than conventional osteosarcoma.","definition_xrefs":["NCIT:C6474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"low grade central osteosarcoma","secondary_identifiers":["ONCOTREE:LGCOS","UMLS:C3814534","MEDGEN:818980","ICDO:9187/3"],"synonyms":[{"name":"intraosseous well-differentiated osteogenic sarcoma","type":"exact"},{"name":"intraosseous well-differentiated osteosarcoma","type":"exact"},{"name":"low grade central osteosarcoma","type":"exact"},{"name":"low grade intramedullary osteosarcoma","type":"exact"},{"name":"low-grade central osteosarcoma","type":"related"},{"name":"low-grade intramedullary osteosarcoma","type":"exact"}],"termid":"MONDO:0006271","xrefs":{"Monarch":{"xref_id":"0006271"}}}


id: PATO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000084 relative rhythym (obsolete PATO:0000084)","termid":"PATO:0000084"}


id: PBO:0090913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fcf2","termid":"PBO:0090913"}


id: GO:0004071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-aspartate + NH3 = AMP + diphosphate + L-asparagine.","definition_xrefs":["EC:6.3.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia ligase activity","termid":"GO:0016211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aspartate-ammonia ligase activity","secondary_identifiers":["RHEA:11372","MetaCyc:ASNSYNA-RXN"],"synonyms":[{"name":"L-asparagine synthetase activity","type":"related"},{"name":"L-aspartate:ammonia ligase (AMP-forming)","type":"related"},{"name":"asparagine synthetase activity","type":"related"}],"termid":"GO:0004071"}


id: MONDO:0008726
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85964],"is_not":false,"summary":null,"term":"MONDO:0008726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Antley-Bixler syndrome","termid":"MONDO:0008803"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:63269","NCIT:C178415","GARD:16665","MEDGEN:461449","OMIM:201750","UMLS:C3150099"],"synonyms":[{"name":"ABS1","type":"related"},{"name":"Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis","type":"exact"},{"name":"Antley-Bixler syndrome with genital anomaly and disorder of steroidogenesis","type":"exact"}],"termid":"MONDO:0008726","terms_by_termid":{"MONDO:0008726":null},"xrefs":{"Monarch":{"xref_id":"0008726"}}}


id: GO:1901026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of ripoptosome components leading to a necroptotic process.","definition_xrefs":["GOC:TermGenie","PMID:22274400","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ripoptosome assembly","termid":"GO:0097343"},{"relation_name":"part_of","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"ripoptosome assembly involved in necroptotic process","synonyms":[{"name":"ripoptosome assembly involved in necroptosis","type":"narrow"}],"termid":"GO:1901026"}


id: PBO:0079354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1b","termid":"PBO:0079354"}


id: MONDO:0008362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ragweed sensitivity","secondary_identifiers":["OMIM:179450","MESH:C566725","UMLS:C1867394","MEDGEN:356768"],"synonyms":[{"name":"ragweed sensitivity","type":"exact"}],"termid":"MONDO:0008362","xrefs":{"Monarch":{"xref_id":"0008362"}}}


id: GO:0060649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland bud grows along its axis.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud elongation","termid":"GO:0060649"}


id: MONDO:1012235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kidney disorder that occurs in dogs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal disease, dog","secondary_identifiers":["OMIA:000856-9615"],"termid":"MONDO:1012235","xrefs":{"Monarch":{"xref_id":"1012235"}}}


id: RO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has end sequence y if the end of x is identical to the end of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_sequence","termid":"RO:0002518"}


id: PBO:0091591
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AStra Associated protein","termid":"PBO:0091591"}


id: PBO:0078279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 12-1","termid":"PBO:0078279"}


id: SO:0002185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding locus that originates from within the promoter region of a protein-coding gene, with transcription proceeding in the opposite direction on the other strand.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bidirectional_promoter_lncRNA_gene","synonyms":[{"name":"bidirectional promoter lncRNA","type":"exact"},{"name":"bidirectional promoter lncRNA gene","type":"exact"},{"name":"bidirectional_promoter_lncRNA_gene","type":"exact"}],"termid":"SO:0002185"}


id: MONDO:0011235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"pelvic dysplasia-arthrogryposis of lower limbs syndrome","secondary_identifiers":["GARD:4269","Orphanet:2840","UMLS:C1865294","MEDGEN:400731","OMIM:602484"],"synonyms":[{"name":"Ray-Peterson-Scott syndrome","type":"exact"},{"name":"pelvic dysplasia arthrogryposis of lower limbs","type":"related"},{"name":"pelvic hypoplasia with LOWER-limb arthrogryposis","type":"related"},{"name":"pelvic hypoplasia with arthrogryposis of lower limbs","type":"related"},{"name":"pelvic hypoplasia with lower limb arthrogryposis","type":"related"}],"termid":"MONDO:0011235","xrefs":{"Monarch":{"xref_id":"0011235"}}}


id: MONDO:0850014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twin-reversed arterial perfusion sequence","secondary_identifiers":["MEDGEN:1842726","UMLS:C5575500","GARD:22446","Orphanet:617297"],"termid":"MONDO:0850014","xrefs":{"Monarch":{"xref_id":"0850014"}}}


id: PBO:0063205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 1","termid":"PBO:0063205"}


id: PBO:0058427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4797","termid":"PBO:0058427"}


id: PBO:0002889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase (GABA transaminase)","termid":"PBO:0002889"}


id: PBO:0062231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 10 pseudogene","termid":"PBO:0062231"}


id: PBO:0059779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 5","termid":"PBO:0059779"}


id: PBO:0056838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member C","termid":"PBO:0056838"}


id: GO:0052917
data:
  {"annotated_genes":["SJAG_00437"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61300],"is_not":false,"summary":null,"term":"GO:0052917"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of mannose to dolichyl-pyrophosphate Man7GlcNAc2 (also written as Man7GlcNAc2-PP-Dol) in alpha-(1->6) linkage, producing Man8GlcNAc2-PP-Dol.","definition_xrefs":["PMID:10336995","RHEA:29535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,6-mannosyltransferase activity","termid":"GO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00437":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dolichyl-P-Man:Man(7)GlcNAc(2)-PP-dolichol alpha-1,6-mannosyltransferase","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-5468","GO:0052824","KEGG_REACTION:R06260","EC:2.4.1.260"],"synonyms":[{"name":"dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity","type":"exact"},{"name":"dolichyl-P-mannose:Man(7)GlcNAc(2)-PP-dolichyl mannosyltransferase activity","type":"exact"},{"name":"dolichyl-pyrophosphate Man7GlcNAc2 alpha-1,6-mannosyltransferase activity","type":"exact"}],"termid":"GO:0052917","terms_by_termid":{"GO:0052917":null}}


id: PBO:0052692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 16","termid":"PBO:0052692"}


id: PBO:0071390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 13","termid":"PBO:0071390"}


id: PBO:0064437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyribonucleotide nucleotidyltransferase 1 pseudogene 2","termid":"PBO:0064437"}


id: GO:1902731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23212449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"negatively_regulates","term_name":"chondrocyte proliferation","termid":"GO:0035988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte proliferation","synonyms":[{"name":"down regulation of cartilage cell proliferation","type":"exact"},{"name":"down regulation of chondrocyte cell proliferation","type":"exact"},{"name":"down regulation of chondrocyte proliferation","type":"exact"},{"name":"down-regulation of cartilage cell proliferation","type":"exact"},{"name":"down-regulation of chondrocyte cell proliferation","type":"exact"},{"name":"down-regulation of chondrocyte proliferation","type":"exact"},{"name":"downregulation of cartilage cell proliferation","type":"exact"},{"name":"downregulation of chondrocyte cell proliferation","type":"exact"},{"name":"downregulation of chondrocyte proliferation","type":"exact"},{"name":"inhibition of cartilage cell proliferation","type":"narrow"},{"name":"inhibition of chondrocyte cell proliferation","type":"narrow"},{"name":"inhibition of chondrocyte proliferation","type":"narrow"},{"name":"negative regulation of cartilage cell proliferation","type":"exact"},{"name":"negative regulation of chondrocyte cell proliferation","type":"exact"}],"termid":"GO:1902731"}


id: GO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in generating the mature 3'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at B2","type":"narrow"}],"termid":"GO:0000468"}


id: MONDO:1011594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickets, horse","secondary_identifiers":["OMIA:002364-9796"],"termid":"MONDO:1011594","xrefs":{"Monarch":{"xref_id":"1011594"}}}


id: MONDO:0008308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priapism, familial idiopathic","secondary_identifiers":["MEDGEN:356846","MESH:C531791","OMIM:176620","UMLS:C1867771"],"synonyms":[{"name":"familial idiopathic priapism","type":"related"},{"name":"priapism, familial idiopathic","type":"exact"}],"termid":"MONDO:0008308","xrefs":{"Monarch":{"xref_id":"0008308"}}}


id: GO:0140786
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113167],"is_not":false,"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of glutamine.","definition_xrefs":["PMID:34535752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid sensor activity","termid":"GO:0140785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140299"],"is_obsolete":false,"name":"glutamine sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamine sensing activity","type":"exact"}],"termid":"GO:0140786","terms_by_termid":{"GO:0140786":null}}


id: PBO:0043515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 4","termid":"PBO:0043515"}


id: MONDO:1012546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome B-related exercise intolerance, non-human animal","termid":"MONDO:1011722"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome B-related exercise intolerance, sheep","secondary_identifiers":["OMIA:002407-9940"],"termid":"MONDO:1012546","xrefs":{"Monarch":{"xref_id":"1012546"}}}


id: PR:Q9HE15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1399.04c gene.","definition_xrefs":["UniProtKB:Q9HE15","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.04c","synonyms":[{"name":"Spom972h-SPAC1399.04c","type":"exact"},{"name":"UMP pyrophosphorylase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UPRTase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HE15"}


id: GO:0070587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of attachment of a cell to another cell affecting gastrulation.","definition_xrefs":["GOC:dsf","PMID:19091770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"cell-cell adhesion involved in gastrulation","termid":"GO:0070586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-cell adhesion involved in gastrulation","termid":"GO:0070587"}


id: MONDO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, lethal congenital malformation characterized by bilateral renal agenesis and the absence or decreased volume of amniotic fluid (oligohydramnios). The presence of oligohydramnios gives rise to congenital anomalies that include hypoplastic lungs, lower extremities abnormalities, and characteristic facial features (low-set ears, widely separated eyes, nose flattening, and receding chin). Newborn infants usually die of respiratory failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"oligohydramnios","termid":"MONDO:0005881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potter sequence","secondary_identifiers":["DOID:12594","SCTID:41962002","ICD10CM:Q60.6","MEDGEN:472617","NCIT:C40435","NANDO:2200157","UMLS:C0178426"],"synonyms":[{"name":"Potter syndrome","type":"exact"},{"name":"Potter's sequence","type":"exact"},{"name":"Potter's syndrome","type":"exact"},{"name":"oligohydramnios sequence","type":"exact"}],"termid":"MONDO:0001558","xrefs":{"Monarch":{"xref_id":"0001558"}}}


id: PBO:0027371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_disulfide_oxidoreductase_activity","termid":"PBO:0027371"}


id: GO:0035019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which an organism retains a population of somatic stem cells, undifferentiated cells in the embryo or adult which can undergo unlimited division and give rise to cell types of the body other than those of the germ-line.","definition_xrefs":["ISBN:0582227089","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic stem cell population maintenance","secondary_identifiers":["Reactome:R-HSA-452723"],"termid":"GO:0035019"}


id: MONDO:0010103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth, fused","secondary_identifiers":["OMIM:273000","MEDGEN:4808","SCTID:1744008","MESH:D005671","UMLS:C0016873"],"synonyms":[{"name":"teeth, fused","type":"exact"}],"termid":"MONDO:0010103","xrefs":{"Monarch":{"xref_id":"0010103"}}}


id: PBO:0070974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 12","termid":"PBO:0070974"}


id: PBO:0109357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JUN divergent transcript","termid":"PBO:0109357"}


id: GO:1900140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seedling development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"regulates","term_name":"seedling development","termid":"GO:0090351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seedling development","termid":"GO:1900140"}


id: GO:0004625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent secreted phospholipase A2 activity (obsolete GO:0004625)","synonyms":[{"name":"calcium-dependent secreted phospholipase A2 activity","type":"exact"}],"termid":"GO:0004625"}


id: PBO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pcr1","termid":"PBO:0002432"}


id: PBO:0088187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger protein containing five transmembrane domains; null mutant exhibits strongly fragmented vacuoles and sensitivity to brefeldin A, a drug which is known to affect intracellular transport","termid":"PBO:0088187"}


id: PBO:0054864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2278","termid":"PBO:0054864"}


id: GO:1904297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of osmolarity-sensing cation channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:18279313"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of osmolarity-sensing cation channel activity (obsolete GO:1904297)","synonyms":[{"name":"activation of osmolarity-sensing cation channel activity","type":"narrow"},{"name":"up regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"up-regulation of osmolarity-sensing cation channel activity","type":"exact"},{"name":"upregulation of osmolarity-sensing cation channel activity","type":"exact"}],"termid":"GO:1904297"}


id: PBO:0058440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5004","termid":"PBO:0058440"}


id: GO:0140311
data:
  {"annotated_genes":["SJAG_00145","SJAG_02576","SJAG_04873","SJAG_01993","SJAG_02474","SJAG_00436","SJAG_02857","SJAG_00642","SJAG_00822","SJAG_02266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87973,90554,95497,95560,100813,100864,105323,107730,112028],"is_not":false,"summary":null,"term":"GO:0140311"},{"annotations":[114625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003788"}]},"cv_name":"molecular_function","definition":"Binding to a protein to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:1493333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sequestering activity","termid":"GO:0140313"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_01993":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"protein sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140311","terms_by_termid":{"GO:0003788":null,"GO:0140311":null}}


id: GO:0015517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: galactose(out) + H+(out) = galactose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.1","TC:2.A.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose transmembrane transporter activity","termid":"GO:0005354"},{"relation_name":"is_a","term_name":"hexose:proton symporter activity","termid":"GO:0009679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"galactose:proton symporter activity","synonyms":[{"name":"galactose:hydrogen symporter activity","type":"exact"},{"name":"lactose, galactose:hydrogen symporter activity","type":"broad"}],"termid":"GO:0015517"}


id: PBO:0004322
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.41","termid":"PBO:0004322"}


id: GO:0034231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mature islet amyloid polypeptide (IAPP) by posttranslational processing of pro-islet amyloid polypeptide (pro-IAPP).","definition_xrefs":["PMID:15983213","PMID:8262946","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"islet amyloid polypeptide processing","synonyms":[{"name":"IAPP formation","type":"exact"},{"name":"IAPP processing","type":"exact"},{"name":"islet amyloid peptide formation","type":"exact"},{"name":"islet amyloid peptide processing","type":"exact"},{"name":"islet amyloid polypeptide formation","type":"related"}],"termid":"GO:0034231"}


id: PBO:0064020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 54","termid":"PBO:0064020"}


id: PBO:0065845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 1","termid":"PBO:0065845"}


id: GO:0010903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of very-low-density lipoprotein particle remodeling. Very-low-density lipoprotein particle remodeling is the acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle remodeling","termid":"GO:0010901"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"very-low-density lipoprotein particle remodeling","termid":"GO:0034372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of very-low-density lipoprotein particle remodeling","synonyms":[{"name":"negative regulation of VLDL remodeling","type":"exact"},{"name":"negative regulation of VLDL remodelling","type":"exact"},{"name":"negative regulation of very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0010903"}


id: GO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of myostimulatory hormone, a peptide hormone that stimulates muscle contraction.","definition_xrefs":["PMID:12204246","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"positively_regulates","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"regulates","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0005515","GO:0140677","GO:0098772","GO:0038023","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myostimulatory hormone activity","termid":"GO:0016084"}


id: GO:0006167
data:
  {"annotated_genes":["SJAG_01070","SJAG_00044","SJAG_01859","SJAG_02850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79181,77151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[57088,74295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"AMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"AMP anabolism","type":"exact"},{"name":"AMP biosynthesis","type":"exact"},{"name":"AMP formation","type":"exact"},{"name":"AMP synthesis","type":"exact"}],"termid":"GO:0006167","terms_by_termid":{"GO:0044208":null,"GO:0044209":null}}


id: PBO:0054553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1954","termid":"PBO:0054553"}


id: GO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system.","definition_xrefs":["CL:0000125","GOC:sart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell apoptotic process","synonyms":[{"name":"apoptosis of glia","type":"exact"},{"name":"apoptosis of glial cells","type":"exact"},{"name":"glia apoptosis","type":"exact"},{"name":"glia programmed cell death by apoptosis","type":"exact"},{"name":"glial cell apoptosis","type":"narrow"},{"name":"glial cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of glia by apoptosis","type":"exact"},{"name":"programmed cell death of glial cells by apoptosis","type":"exact"},{"name":"programmed cell death, glia","type":"exact"},{"name":"programmed cell death, glial cells","type":"exact"}],"termid":"GO:0034349"}


id: GO:1903877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 21-deoxycortisol.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:10802282","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"21-deoxycortisol binding","termid":"GO:1903877"}


id: PBO:0004714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T (predicted)","termid":"PBO:0004714"}


id: GO:0030870
data:
  {"annotated_genes":["SJAG_01677","SJAG_05373","SJAG_00640"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79768,80597,112030],"is_not":false,"summary":null,"term":"GO:0030870"}]},"cv_name":"cellular_component","definition":"Trimeric protein complex that possesses endonuclease activity; involved in meiotic recombination, DNA repair and checkpoint signaling. In Saccharomyces cerevisiae, the complex comprises Mre11p, Rad50p, and Xrs2p; complexes identified in other species generally contain proteins orthologous to the Saccharomyces cerevisiae proteins.","definition_xrefs":["GOC:mah","PMID:17674145","GOC:vw","PMID:11988766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00640":null,"SJAG_01677":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Mre11 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MRN complex","type":"exact"},{"name":"MRX complex","type":"exact"},{"name":"RAD50-MRE11-NBN complex","type":"exact"},{"name":"RMX complex","type":"exact"},{"name":"Rad50 complex","type":"exact"},{"name":"Rad50-Rad32-Nbs1 complex","type":"exact"}],"termid":"GO:0030870","terms_by_termid":{"GO:0030870":null}}


id: GO:1905369
data:
  {"annotated_genes":["SJAG_04144","SJAG_04484","SJAG_03648","SJAG_00762","SJAG_00128","SJAG_05278","SJAG_02397","SJAG_02542","SJAG_03638","SJAG_00846","SJAG_04969","SJAG_04088","SJAG_03733","SJAG_01750","SJAG_03321","SJAG_02992","SJAG_05316","SJAG_00712","SJAG_02776","SJAG_02809","SJAG_02341","SJAG_00808","SJAG_03151","SJAG_03737","SJAG_04306","SJAG_04541","SJAG_00766","SJAG_03672","SJAG_04888","SJAG_03408","SJAG_00738","SJAG_02867","SJAG_02562","SJAG_01544","SJAG_04211","SJAG_03261","SJAG_04229","SJAG_01014","SJAG_04477","SJAG_02502","SJAG_00778","SJAG_01131","SJAG_04641","SJAG_01489","SJAG_01652","SJAG_01203","SJAG_02900","SJAG_00460","SJAG_04572","SJAG_03292","SJAG_04357"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75718,70987,71188,74896,74894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[77197,80327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042720"},{"annotations":[105903,113492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017087"},{"annotations":[110643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000502"},{"annotations":[75749,70154,72878,72278,73301,78721,75501],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[69841,61422,56994,57446,61824,63677,64484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"},{"annotations":[78301,78484,73457,78759,79926,73991,77414,80203,79480],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[73922,62622,73167,78523,79696,71742,76810,111538,71637,74591,99273,74604,115457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"},{"annotations":[103592,117874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990520"},{"annotations":[61965,74251,68191,66015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endopeptidase activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:1689240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_00460":null,"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_00846":null,"SJAG_01014":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_01750":null,"SJAG_02341":null,"SJAG_02397":null,"SJAG_02502":null,"SJAG_02542":null,"SJAG_02562":null,"SJAG_02776":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03151":null,"SJAG_03261":null,"SJAG_03292":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_03648":null,"SJAG_03672":null,"SJAG_03733":null,"SJAG_03737":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04541":null,"SJAG_04572":null,"SJAG_04641":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05278":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endopeptidase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:1905369","terms_by_termid":{"GO:0000502":null,"GO:0005787":null,"GO:0008540":null,"GO:0008541":null,"GO:0017087":null,"GO:0019773":null,"GO:0019774":null,"GO:0042720":null,"GO:0042765":null,"GO:1990520":null}}


id: PBO:0081711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 630","termid":"PBO:0081711"}


id: FYPO:0001343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic DNA replication","synonyms":[{"name":"abnormal DNA replication during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication during vegetative growth","type":"exact"},{"name":"abnormal DNA-dependent DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001343"}


id: MONDO:0016030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome is a rare chronic hematologic disorder characterized by the simultaneous or sequential association of autoimmune hemolytic anemia (AIHA; a disorder in which auto-antibodies are directed against red blood cells causing anemia of varying degrees of severity) with immune thrombocytopenic purpura (ITP; a coagulation disorder in which auto-antibodies are directed against platelets causing hemorrhagic episodes) and occasionally autoimmune neutropenia, in the absence of a known underlying etiology.","definition_xrefs":["Orphanet:1959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary thrombocytopenia","termid":"MONDO:0004680"},{"relation_name":"is_a","term_name":"autoimmune thrombocytopenia","termid":"MONDO:0019098"},{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"Evans syndrome","secondary_identifiers":["MEDGEN:75773","NCIT:C61284","SCTID:75331009","UMLS:C0272126","GARD:6389","icd11.foundation:1048228553","DOID:8931","ICD10CM:D69.41","MedDRA:10053873","ICD9:287.32","MESH:C536380","NORD:1112","NANDO:1200310"],"synonyms":[{"name":"Evan syndrome","type":"related"},{"name":"Evans' syndrome","type":"exact"},{"name":"autoimmune hemolytic anaemia and autoimmune thrombocytopenia","type":"exact"},{"name":"autoimmune hemolytic anemia and autoimmune thrombocytopenia","type":"exact"},{"name":"immune pancytopenia","type":"exact"}],"termid":"MONDO:0016030","xrefs":{"Monarch":{"xref_id":"0016030"}}}


id: MONDO:0017995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylocostal dysostosis-hypospadias-intellectual disability syndrome","secondary_identifiers":["UMLS:C4751002","MEDGEN:1665083","Orphanet:329252"],"termid":"MONDO:0017995","xrefs":{"Monarch":{"xref_id":"0017995"}}}


id: GO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-D-gluconate = 2-dehydro-3-deoxy-6-phospho-D-gluconate + H2O.","definition_xrefs":["EC:4.2.1.12","RHEA:17277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphogluconate dehydratase activity","secondary_identifiers":["MetaCyc:PGLUCONDEHYDRAT-RXN","KEGG_REACTION:R02036"],"synonyms":[{"name":"6-phospho-D-gluconate hydro-lyase (2-dehydro-3-deoxy-6-phospho-D-gluconate-forming)","type":"related"},{"name":"6-phospho-D-gluconate hydro-lyase activity","type":"related"},{"name":"6-phosphogluconate dehydrase activity","type":"related"},{"name":"6-phosphogluconate dehydratase activity","type":"related"},{"name":"6-phosphogluconic dehydrase activity","type":"related"},{"name":"gluconate 6-phosphate dehydratase activity","type":"related"},{"name":"gluconate-6-phosphate dehydratase activity","type":"related"}],"termid":"GO:0004456"}


id: MONDO:0700134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that occurs in cattle.","definition_xrefs":["NCIT:C134527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine neoplasm","termid":"MONDO:0700134","xrefs":{"Monarch":{"xref_id":"0700134"}}}


id: PBO:0063919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma","termid":"PBO:0063919"}


id: GO:0010308
data:
  {"annotated_genes":["SJAG_00309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58758],"is_not":false,"summary":null,"term":"GO:0010308"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydroxy-5-(methylthio)pent-1-en-3-one + O2 = 3-(methylthio)propanoate + CO + formate.","definition_xrefs":["EC:1.13.11.53","RHEA:14161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acireductone dioxygenase (Ni2+-requiring) activity","references_by_uniquename":{"GO_REF:0000104":null},"secondary_identifiers":["MetaCyc:R146-RXN","KEGG_REACTION:R07363"],"synonyms":[{"name":"1,2-dihydroxy-5-(methylthio)pent-1-en-3-one:oxygen oxidoreductase (formate- and CO-forming)","type":"related"},{"name":"2-hydroxy-3-keto-5-thiomethylpent-1-ene dioxygenase activity","type":"broad"},{"name":"ARD activity","type":"related"},{"name":"E-2 activity","type":"related"},{"name":"acireductone dioxygenase activity","type":"broad"}],"termid":"GO:0010308","terms_by_termid":{"GO:0010308":null}}


id: GO:0102263
data:
  {"annotated_genes":["SJAG_00174"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109945],"is_not":false,"summary":null,"term":"GO:0102263"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil17 in tRNA + NAD(P) = H+ + a uracil17 in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00174":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0140098","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tRNA-dihydrouridine17 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12455"],"termid":"GO:0102263","terms_by_termid":{"GO:0102263":null}}


id: PBO:0083975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible alcohol dehydrogenase II; catalyzes the conversion of ethanol to acetaldehyde; involved in the production of certain carboxylate esters; regulated by ADR1","termid":"PBO:0083975"}


id: GO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell differentiation","synonyms":[{"name":"activation of gamma-delta T cell differentiation","type":"narrow"},{"name":"positive regulation of gamma-delta T cell development","type":"related"},{"name":"positive regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of gamma-delta T cell differentiation","type":"narrow"},{"name":"up regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"up-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"upregulation of gamma-delta T cell differentiation","type":"exact"}],"termid":"GO:0045588"}


id: PBO:0062290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 1","termid":"PBO:0062290"}


id: PBO:0051517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 beta","termid":"PBO:0051517"}


id: MONDO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden increase of intraocular pressure, resulting in pain and an abrupt decrease in visual acuity.","definition_xrefs":["NCIT:C34639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"angle-closure glaucoma","secondary_identifiers":["DOID:13550","MEDGEN:6610","MESH:D015812","SCTID:392291006","UMLS:C0017605"],"synonyms":[{"name":"ACG - angle-closure glaucoma","type":"exact"},{"name":"Narrow cleft glaucoma","type":"exact"},{"name":"angle closure glaucoma","type":"exact"},{"name":"primary open-angle glaucoma with narrow angles","type":"exact"}],"termid":"MONDO:0001744","xrefs":{"Monarch":{"xref_id":"0001744"}}}


id: GO:0090451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which boundaries between a cotyledon and the surrounding tissue are established and maintained.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of plant organ boundary","termid":"GO:0090691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon boundary formation","termid":"GO:0090451"}


id: GO:0052318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins, any of a range of substances produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phytoalexin metabolic process (obsolete GO:0052318)","synonyms":[{"name":"regulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052318"}


id: GO:0044692
data:
  {"annotated_genes":["SJAG_00686","SJAG_04682"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90040,105241],"is_not":false,"summary":null,"term":"GO:0044692"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an exoribonuclease.","definition_xrefs":["PMID:22570495","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease activator activity","termid":"GO:0170054"},{"relation_name":"positively_regulates","term_name":"RNA exonuclease activity","termid":"GO:0004532"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"regulates","termid":"GO:0004527"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"positively_regulates","termid":"GO:0004527"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"regulates","termid":"GO:0016788"},{"rel_name":"positively_regulates","termid":"GO:0140098"},{"rel_name":"positively_regulates","termid":"GO:0016788"},{"rel_name":"positively_regulates","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016788","GO:0003824","GO:0004527","GO:0098772","GO:0140677","GO:0003674","GO:0030234","GO:0016787"],"is_obsolete":false,"name":"exoribonuclease activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044692","terms_by_termid":{"GO:0044692":null}}


id: PBO:0004855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific 1,3-beta-glucanosyltransferase Gas4","termid":"PBO:0004855"}


id: PBO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininemia","termid":"PBO:0001251"}


id: MONDO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervix carcinoma (obsolete MONDO:0002456)","termid":"MONDO:0002456","xrefs":{"Monarch":{"xref_id":"0002456"}}}


id: GO:0120240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The carbohydrate rich layer at the outermost periphery of a platelet.","definition_xrefs":["GOC:krc","PMID:24967889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"platelet glycocalyx","termid":"GO:0120240"}


id: PBO:0067978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 280","termid":"PBO:0067978"}


id: SO:0000137
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Allelic exclusion is a process occurring in diploid organisms, where a gene is inactivated and not expressed in that cell.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epigenetically_modified","termid":"SO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelically_excluded","synonyms":[{"name":"allelically excluded","type":"exact"}],"termid":"SO:0000137"}


id: PBO:0064374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMPCA pseudogene 1","termid":"PBO:0064374"}


id: PBO:0050461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hook microtubule tethering protein 2","termid":"PBO:0050461"}


id: MONDO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the central nervous system. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C6999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"malignant central nervous system mesenchymal, non-meningothelial neoplasm","termid":"MONDO:0037740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system leiomyosarcoma","secondary_identifiers":["UMLS:C1334385","MEDGEN:235254","DOID:5254"],"synonyms":[{"name":"CNS leiomyosarcoma","type":"exact"},{"name":"central nervous system leiomyosarcoma","type":"exact"},{"name":"leiomyosarcoma of CNS","type":"exact"},{"name":"leiomyosarcoma of central nervous system","type":"exact"},{"name":"leiomyosarcoma of the CNS","type":"exact"},{"name":"leiomyosarcoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003349","xrefs":{"Monarch":{"xref_id":"0003349"}}}


id: PBO:0031210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snowman-shaped_spore","termid":"PBO:0031210"}


id: MONDO:0004088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive variant of cervical squamous cell carcinoma characterized by the presence of nests of malignant basaloid squamous cells with scant amount of cytoplasm.","definition_xrefs":["NCIT:C40189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical basaloid carcinoma","secondary_identifiers":["DOID:7046","MEDGEN:267027","UMLS:C1511063"],"synonyms":[{"name":"cervical basaloid carcinoma","type":"exact"},{"name":"cervical basaloid squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004088","xrefs":{"Monarch":{"xref_id":"0004088"}}}


id: GO:0097408
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cellular inclusion consisting of circular areas filled with fine slender filaments about 10 nanometers in diameter, delimited by a wall of varying complexity (either a single continuous membrane or a tubular network consisting of a fine filamentous material giving the wall a honeycomb appearance). Fibrillary inclusions are found in the cytoplasm of giant cells of Dieters in the lateral vestibular nucleus of the rat; similar structures have been described in the ventral cochlear nucleus, spinal cord, and substantia nigra.","definition_xrefs":["NIF_Subcellular:sao967812059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibrillary inclusion","termid":"GO:0097408"}


id: PR:Q9USU1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efc25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USU1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras guanine nucleotide exchange factor efc25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.03","synonyms":[{"name":"Spom972h-efc25","type":"exact"},{"name":"exchange factor cdc25p-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USU1"}


id: PBO:0068464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 41, pseudogene","termid":"PBO:0068464"}


id: GO:2000710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034095"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"negatively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"negative regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"negative regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"negative regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000710"}


id: MOD:00968
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CM-Cys vs PAM-Cys","termid":"MOD:00968"}


id: GO:0052434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of any form of cell-based immune response of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont cell-mediated immune response (obsolete GO:0052434)","synonyms":[{"name":"modulation by organism of symbiont cell-based immune response","type":"exact"},{"name":"modulation by organism of symbiont cell-mediated immune response","type":"exact"}],"termid":"GO:0052434"}


id: MONDO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolffian duct adenoma (obsolete MONDO:0002364)","termid":"MONDO:0002364","xrefs":{"Monarch":{"xref_id":"0002364"}}}


id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: GO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-11 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-11 receptor binding","synonyms":[{"name":"IL-11","type":"narrow"},{"name":"interleukin-11 receptor ligand","type":"narrow"}],"termid":"GO:0005142"}


id: GO:0140897
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108765],"is_not":false,"summary":null,"term":"GO:0140897"}]},"cv_name":"molecular_function","definition":"Combining with a mechanical force and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.","definition_xrefs":["PMID:23907979","PMID:34666001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mechanoreceptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140897","terms_by_termid":{"GO:0140897":null}}


id: GO:0097705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:BHF_miRNA","PMID:21768538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to pulsatile fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to pulsatile fluid shear stress","type":"exact"}],"termid":"GO:0097705"}


id: PBO:0084316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase specific for H3-K36; similar to proteins found in human, mouse, drosophila, X. laevis, C. elegans, and S. pombe","termid":"PBO:0084316"}


id: PBO:0068025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 330","termid":"PBO:0068025"}


id: PBO:0038601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with coiled-coil, ankyrin repeat and PH domains 2","termid":"PBO:0038601"}


id: PBO:0029978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_export_from_nucleus","termid":"PBO:0029978"}


id: PBO:0027802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_JM335","termid":"PBO:0027802"}


id: PBO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase beta subunit (predicted)","termid":"PBO:0001108"}


id: PBO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 1","termid":"PBO:0045445"}


id: MOD:01738
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-128 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-128 reporter+balance reagent acylated residue","termid":"MOD:01736"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-128 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01738"}


id: MONDO:0014934
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87506],"is_not":false,"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"Any autosomal dominant cerebellar ataxia in which the cause of the disease is a mutation in the UBA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 24","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111615","MEDGEN:934666","UMLS:C4310699","OMIM:617133"],"synonyms":[{"name":"SCAR24","type":"exact"},{"name":"UBA5 autosomal dominant cerebellar ataxia","type":"exact"},{"name":"autosomal dominant cerebellar ataxia caused by mutation in UBA5","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 24","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 24; SCAR24","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive type 24","type":"exact"}],"termid":"MONDO:0014934","terms_by_termid":{"MONDO:0014934":null},"xrefs":{"Monarch":{"xref_id":"0014934"}}}


