# terms

id: MONDO:0007283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 42","secondary_identifiers":["DOID:0110237","OMIM:115900","UMLS:C4011454","MEDGEN:859891"],"synonyms":[{"name":"A cataract that has_material_basis_in heterozygous mutation in the CRYBA2 gene on chromosome 2q35.","type":"exact"},{"name":"CRYBA2 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT42","type":"exact"},{"name":"cataract 42","type":"exact"},{"name":"cataract type 42","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBA2","type":"exact"}],"termid":"MONDO:0007283","xrefs":{"Monarch":{"xref_id":"0007283"}}}


id: FYPO:0003475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arsenate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal arsenate reductase activity","termid":"FYPO:0003475"}


id: FYPO:0002898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"abolished protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002898"}


id: PBO:0018187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 beta subunit, guanyl-nucleotide exchange factor (eEF1B)","termid":"PBO:0018187"}


id: GO:1905147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle hypertrophy.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA","PMID:22161164","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"smooth muscle hypertrophy","termid":"GO:0014895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle hypertrophy","termid":"GO:1905147"}


id: GO:0035895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of blood mast cell degranulation in another organism. Mast cell degranulation is the regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.","definition_xrefs":["GOC:fj","GOC:bf","PMID:21549739"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of mast cell degranulation in another organism (obsolete GO:0035895)","synonyms":[{"name":"modulation of mast cell degranulation in other organism","type":"exact"},{"name":"regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0035895"}


id: PBO:0065910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB GTPase activating protein 1 like","termid":"PBO:0065910"}


id: GO:0016469
data:
  {"annotated_genes":["SJAG_00542","SJAG_01397","SJAG_MIT15","SJAG_02564","SJAG_01817","SJAG_04955","SJAG_05294","SJAG_07003","SJAG_01913","SJAG_MIT09","SJAG_04015","SJAG_03114","SJAG_02598","SJAG_MIT37","SJAG_00438","SJAG_00836","SJAG_00516","SJAG_04122","SJAG_02782","SJAG_02105","SJAG_00133","SJAG_00212","SJAG_00915","SJAG_01447","SJAG_03925","SJAG_00985","SJAG_02023","SJAG_05204","SJAG_00136","SJAG_01471","SJAG_03962","SJAG_03406"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67131,119363,95178,103996,64005,67462,57295,64509,66809,119357,65241,60506,119368,57853,60043,116144,108213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[119369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033177"},{"annotations":[62011,92390,95983,96165,100267,104225,90499],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[102986,71568,88376,96941,110180,60649,99239,119023],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane. The complex comprises a membrane sector (F0, V0, or A0) that carries out proton transport and a cytoplasmic compartment sector (F1, V1, or A1) that catalyzes ATP synthesis or hydrolysis. Two major types have been characterized: V-type ATPases couple ATP hydrolysis to the transport of protons across a concentration gradient, whereas F-type ATPases, also known as ATP synthases, normally run in the reverse direction to utilize energy from a proton concentration or electrochemical gradient to synthesize ATP. A third type, A-type ATPases have been found in archaea, and are closely related to eukaryotic V-type ATPases but are reversible.","definition_xrefs":["GOC:mah","ISBN:0716743663","PMID:16691483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00438":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02782":null,"SJAG_03114":null,"SJAG_03406":null,"SJAG_03925":null,"SJAG_03962":null,"SJAG_04015":null,"SJAG_04122":null,"SJAG_04955":null,"SJAG_05204":null,"SJAG_05294":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting two-sector ATPase complex","type":"exact"},{"name":"vacuolar hydrogen-transporting ATPase","type":"related"}],"termid":"GO:0016469","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0033177":null,"GO:0045259":null}}


id: FYPO:0004059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type) at an CRE promoter in a chromosome.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic recombination","termid":"FYPO:0000488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination at CRE promoter","synonyms":[{"name":"normal meiotic recombination at M26 binding site","type":"exact"}],"termid":"FYPO:0004059"}


id: PBO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0000666"}


id: FYPO:0008191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at a natural  replication barrier is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal replication fork arrest","termid":"FYPO:0008191"}


id: GO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell taking part in gastrulation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"},{"relation_name":"part_of","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"}


id: GO:1903413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["GOC:TermGenie","GOC:rl","GO_REF:0000071","GOC:BHF","PMID:21757002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to bile acid","termid":"GO:1903412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bile acid","termid":"GO:1903413"}


id: PBO:0065031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 6","termid":"PBO:0065031"}


id: GO:0071085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface protein CD9.","definition_xrefs":["PMID:10429193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD9 complex","synonyms":[{"name":"ITGA2b-ITGB3-CD9 complex","type":"narrow"}],"termid":"GO:0071085"}


id: PBO:0112787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI-coated vesicle associated protein, human","termid":"PBO:0112787"}


id: FYPO:0006751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:29632066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"},{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K4 trimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K4 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 trimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"increased histone H3-K4 trimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K4 trimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"increased histone H3K4me3 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K4 trimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006751"}


id: CHEBI:28938
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium","termid":"CHEBI:28938"}


id: MONDO:0005243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Cushing syndrome (obsolete MONDO:0005243)","termid":"MONDO:0005243","xrefs":{"Monarch":{"xref_id":"0005243"}}}


id: PBO:0042783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 126","termid":"PBO:0042783"}


id: PBO:0089649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery monothiol glutaredoxin Grx3","termid":"PBO:0089649"}


id: PBO:0034814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol-serine O-phosphatidyltransferase Pps1","termid":"PBO:0034814"}


id: PBO:0058577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6514","termid":"PBO:0058577"}


id: PR:P36624
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorbitol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11695:SF38","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbitol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.05c","secondary_identifiers":["UniProtKB:P36624"],"synonyms":[{"name":"L-iditol 2-dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1773.05c","type":"related"},{"name":"Spom972h-SORD","type":"exact"},{"name":"protein tms1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36624"}


id: PBO:0085082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear dsRNA-specific ribonuclease (RNase III); involved in rDNA transcription, rRNA processing and U2 snRNA 3' end formation by cleavage of a stem-loop structure at the 3' end of U2 snRNA; involved in polyadenylation-independent transcription termination; involved in the cell wall stress response, regulating the degradation of cell wall integrity and morphogenesis checkpoint genes","termid":"PBO:0085082"}


id: MONDO:0030527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2C, localized","secondary_identifiers":["UMLS:C5562011","MEDGEN:1794221","OMIM:619594"],"synonyms":[{"name":"EBS2C","type":"exact"}],"termid":"MONDO:0030527","xrefs":{"Monarch":{"xref_id":"0030527"}}}


id: PBO:0030621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_maltase_activity","termid":"PBO:0030621"}


id: FYPO:0007095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is increased.","definition_xrefs":["PMID:31495586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"},{"relation_name":"is_a","term_name":"abnormal protein localization to actin fusion focus","termid":"FYPO:0006503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to actin fusion focus","synonyms":[{"name":"increased protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0007095"}


id: PBO:0044867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2B","termid":"PBO:0044867"}


id: PBO:0032710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032710"}


id: MONDO:0009709
data:
  {"annotated_genes":["SJAG_00185"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85829],"is_not":false,"summary":null,"term":"MONDO:0009709"}]},"cv_name":"mondo","definition":"Any centronuclear myopathy in which the cause of the disease is a mutation in the BIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive centronuclear myopathy","termid":"MONDO:0015705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"myopathy, centronuclear, 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111220","OMIM:255200","GARD:15208","MEDGEN:98049","MESH:C562934","UMLS:C0410204"],"synonyms":[{"name":"BIN1 centronuclear myopathy","type":"exact"},{"name":"CNM2","type":"related"},{"name":"centronuclear myopathy 2","type":"exact"},{"name":"centronuclear myopathy caused by mutation in BIN1","type":"exact"},{"name":"myopathy, centronuclear, 2","type":"exact"},{"name":"myopathy, centronuclear, autosomal recessive","type":"related"},{"name":"myopathy, centronuclear, type 2","type":"exact"},{"name":"myotubular myopathy, autosomal recessive","type":"related"}],"termid":"MONDO:0009709","terms_by_termid":{"MONDO:0009709":null},"xrefs":{"Monarch":{"xref_id":"0009709"}}}


id: PBO:0012524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_formation_of","termid":"PBO:0012524"}


id: PBO:0089269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe SPCC569.09  ortholog, syntenic position","termid":"PBO:0089269"}


id: GO:0007302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of the nurse cell nucleus to the plasma membrane.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nurse cell nucleus anchoring","termid":"GO:0007302"}


id: PBO:0085891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in regulation of dNTP production; null mutant suppresses the lethality of lcd1 and rad53 mutations; expression is induced by Kar4p","termid":"PBO:0085891"}


id: PATO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractility which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"contractile","termid":"PATO:0001690"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased contractility","synonyms":[{"name":"high contractility","type":"exact"}],"termid":"PATO:0001580"}


id: PR:Q9UT25
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.02c","synonyms":[{"name":"Spom972h-SPAC9.02c","type":"exact"}],"termid":"PR:Q9UT25"}


id: PBO:0063677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 1","termid":"PBO:0063677"}


id: GO:1902335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive chemotaxis that is involved in neuron migration.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:21658587","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis involved in neuron migration (obsolete GO:1902335)","synonyms":[{"name":"chemoattraction involved in neuron chemotaxis","type":"exact"},{"name":"chemoattraction involved in neuron guidance","type":"related"},{"name":"chemoattraction involved in neuron migration","type":"exact"},{"name":"chemoattraction involved in neuronal migration","type":"exact"},{"name":"positive chemotaxis involved in neuron chemotaxis","type":"exact"},{"name":"positive chemotaxis involved in neuron guidance","type":"related"},{"name":"positive chemotaxis involved in neuron migration","type":"exact"},{"name":"positive chemotaxis involved in neuronal migration","type":"exact"}],"termid":"GO:1902335"}


id: GO:0036530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated protein, to form lactate and a deglycated protein.","definition_xrefs":["PMID:25416785","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"},{"relation_name":"is_a","term_name":"protein deglycation","termid":"GO:0036525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"protein deglycation, methylglyoxal removal","synonyms":[{"name":"protein deglycation of methylglyoxal-glycated protein","type":"related"}],"termid":"GO:0036530"}


id: FYPO:0005958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dephosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein dephosphorylation during vegetative growth","termid":"FYPO:0005957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein dephosphorylation during mitosis","synonyms":[{"name":"decreased protein dephosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein dephosphorylation during mitotic M phase","type":"related"},{"name":"decreased protein dephosphorylation during mitotic M-phase","type":"related"},{"name":"decreased protein dephosphorylation during mitotic nuclear division","type":"exact"},{"name":"decreased protein/peptide dephosphorylation during mitosis","type":"exact"},{"name":"reduced protein dephosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0005958"}


id: GO:0030490
data:
  {"annotated_genes":["SJAG_02608","SJAG_02911","SJAG_00965","SJAG_04979","SJAG_04224","SJAG_04033","SJAG_01877","SJAG_02681","SJAG_02300","SJAG_04582","SJAG_00879","SJAG_00572","SJAG_01609","SJAG_04174","SJAG_02821","SJAG_01323","SJAG_00986","SJAG_02749","SJAG_03539","SJAG_03028","SJAG_04524","SJAG_01623","SJAG_04069","SJAG_04029","SJAG_00945","SJAG_02025","SJAG_03410","SJAG_01604","SJAG_05187","SJAG_03954","SJAG_04900","SJAG_00562","SJAG_04424","SJAG_03425","SJAG_03569","SJAG_02553","SJAG_01347","SJAG_03156","SJAG_01272","SJAG_00772","SJAG_00294","SJAG_02662","SJAG_06613","SJAG_02250","SJAG_04916","SJAG_01551","SJAG_02499","SJAG_02702","SJAG_04339","SJAG_02358","SJAG_03796","SJAG_01618","SJAG_01764","SJAG_00955","SJAG_04908","SJAG_03857","SJAG_01420","SJAG_05018","SJAG_00344","SJAG_03077","SJAG_01907","SJAG_03341","SJAG_02547","SJAG_03654","SJAG_00897","SJAG_02020","SJAG_02644","SJAG_03234","SJAG_01250","SJAG_03952","SJAG_04890","SJAG_03755","SJAG_04687","SJAG_04746","SJAG_03422","SJAG_03846"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59402,70429,73052,73786,73844,74132,75003,75783,76242,76600,79782,80391,89030,91655,92384,94038,95094,96057,97185,98845,100789,100917,101999,102243,110879,112304,113846],"is_not":false,"summary":null,"term":"GO:0030490"},{"annotations":[70740,78317,73353],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[105981,71580,103442,118890,78618,104875,105092,70738,96829,74874,95045,113793,73351,115608,115696,97120,105980,109316,72181],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[74875],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[78316,109317,73352,70739],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"},{"annotations":[97368,75577,115026,73286,73359,78444,75555,78810,73855,66411,71180,71977,73450,77430,79619,80077,71943,88164,89578,80604,72113,91570,109406,80757,74683,76081,75498,76409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000462"},{"annotations":[72700],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904812"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"},{"relation_name":"part_of","term_name":"ribosomal small subunit biogenesis","termid":"GO:0042274"}],"gene_count":76,"genes_by_uniquename":{"SJAG_00294":null,"SJAG_00344":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01323":null,"SJAG_01347":null,"SJAG_01420":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01618":null,"SJAG_01623":null,"SJAG_01764":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02025":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02358":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_02749":null,"SJAG_02821":null,"SJAG_02911":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03234":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03422":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03569":null,"SJAG_03654":null,"SJAG_03755":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03857":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04424":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04687":null,"SJAG_04746":null,"SJAG_04890":null,"SJAG_04900":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"maturation of SSU-rRNA","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SSU-rRNA maturation","type":"exact"},{"name":"processing of 20S pre-rRNA","type":"narrow"}],"termid":"GO:0030490","terms_by_termid":{"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null,"GO:0030490":null,"GO:1904812":null}}


id: GO:0019766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of an IgA isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgA receptor activity","termid":"GO:0019766"}


id: GO:0075520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, within the host cell cytoplasm via the host's actin filaments. Actin-dependent transport is induced by viral proteins that interact with actin and/or host cell motor proteins like myosins or that promotes actin polymerization/depolymerization reactions.","definition_xrefs":["VZ:991","UniProtKB-KW:KW-1178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-dependent intracellular transport of virus","synonyms":[{"name":"actin-dependent intracellular transport of viral material","type":"exact"}],"termid":"GO:0075520"}


id: PBO:0089241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human coilin ortholog Mug174","termid":"PBO:0089241"}


id: GO:0000712
data:
  {"annotated_genes":["SJAG_03567","SJAG_02295","SJAG_00623","SJAG_02822","SJAG_00935","SJAG_03219","SJAG_02616","SJAG_01044","SJAG_02556","SJAG_02465"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72050,74776,75313,77043,79538,108461,109396,110638,117596,117746],"is_not":false,"summary":null,"term":"GO:0000712"}]},"cv_name":"biological_process","definition":"The cleavage and rejoining of intermediates, such as Holliday junctions, formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged.","definition_xrefs":["GOC:elh","PMID:11733053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_02295":null,"SJAG_02465":null,"SJAG_02556":null,"SJAG_02616":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"resolution of meiotic recombination intermediates","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"resolution of meiotic joint molecules as recombinants","type":"narrow"}],"termid":"GO:0000712","terms_by_termid":{"GO:0000712":null}}


id: PBO:0089008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VI","termid":"PBO:0089008"}


id: GO:0086042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cardiomyocyte to another cardiomyocyte via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cardiac muscle cell-cardiac muscle cell adhesion","synonyms":[{"name":"cardiomyocyte-cardiomyocyte adhesion","type":"exact"}],"termid":"GO:0086042"}


id: PR:Q09836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp10 gene.","definition_xrefs":["UniProtKB:Q09836","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase complex subunit atp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.11c","synonyms":[{"name":"Spom972h-atp10","type":"exact"}],"termid":"PR:Q09836"}


id: PBO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 135 member B","termid":"PBO:0047081"}


id: GO:1901946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of miltiradiene.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"miltiradiene metabolic process","termid":"GO:1901944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"miltiradiene biosynthetic process","synonyms":[{"name":"miltiradiene anabolism","type":"exact"},{"name":"miltiradiene biosynthesis","type":"exact"},{"name":"miltiradiene formation","type":"exact"},{"name":"miltiradiene synthesis","type":"exact"}],"termid":"GO:1901946"}


id: GO:0046704
data:
  {"annotated_genes":["SJAG_00885","SJAG_04665","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92777,107571],"is_not":false,"summary":null,"term":"GO:0046704"},{"annotations":[80762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CDP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CDP metabolism","type":"exact"}],"termid":"GO:0046704","terms_by_termid":{"GO:0046704":null,"GO:0046705":null}}


id: GO:0010672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","PMID:12161753"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010672)","synonyms":[{"name":"regulation of meiosis by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"}],"termid":"GO:0010672"}


id: PBO:0073121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEBOX homeobox","termid":"PBO:0073121"}


id: PBO:0067967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 269","termid":"PBO:0067967"}


id: PBO:0030199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cytochalasin_B","termid":"PBO:0030199"}


id: GO:0005234
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when glutamate is bound by the channel complex or one of its constituent parts on the extracellular side of the plasma membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"extracellularly glutamate-gated ion channel activity","synonyms":[{"name":"extracellular-glutamate-gated ion channel activity","type":"exact"}],"termid":"GO:0005234"}


id: PBO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal intermediate chain 4","termid":"PBO:0045164"}


id: GO:0002668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell tolerance induction","termid":"GO:0002665"},{"relation_name":"is_a","term_name":"regulation of T cell anergy","termid":"GO:0002667"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte anergy","termid":"GO:0002912"},{"relation_name":"negatively_regulates","term_name":"T cell anergy","termid":"GO:0002870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell anergy","synonyms":[{"name":"down regulation of T cell anergy","type":"exact"},{"name":"down-regulation of T cell anergy","type":"exact"},{"name":"downregulation of T cell anergy","type":"exact"},{"name":"inhibition of T cell anergy","type":"narrow"},{"name":"negative regulation of T lymphocyte anergy","type":"exact"},{"name":"negative regulation of T-cell anergy","type":"exact"},{"name":"negative regulation of T-lymphocyte anergy","type":"exact"}],"termid":"GO:0002668"}


id: PBO:0081381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 222","termid":"PBO:0081381"}


id: GO:0046412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenylmercury acetate, an organomercurial compound composed of a mercury atom attached to a benzene ring and an acetate group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organometal metabolic process","termid":"GO:0018942"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenylmercury acetate metabolic process","synonyms":[{"name":"phenylmercury acetate metabolism","type":"exact"}],"termid":"GO:0046412"}


id: PBO:0091958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide transmembrane transporter Dal51","termid":"PBO:0091958"}


id: PBO:0058312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4685","termid":"PBO:0058312"}


id: PBO:0047283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group G","termid":"PBO:0047283"}


id: PR:O14034
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized lyase C29B12.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.13","synonyms":[{"name":"Spom972h-SPAC29B12.13","type":"exact"}],"termid":"PR:O14034"}


id: PR:Q9P7Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C186.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.01","synonyms":[{"name":"Spom972h-pfl9","type":"exact"}],"termid":"PR:Q9P7Q2"}


id: SO:1000103
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000103 sequence_variant_decreasing_level_of_translation_product (obsolete SO:1000103)","synonyms":[{"name":"mutationdecreasing level of translation product","type":"related"},{"name":"sequence variant decreasing level of translation product","type":"exact"}],"termid":"SO:1000103"}


id: GO:0047386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 2,6-bisphosphate + H2O = beta-D-fructofuranose 2-phosphate + phosphate.","definition_xrefs":["RHEA:13333","EC:3.1.3.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 6-phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.54-RXN","KEGG_REACTION:R02730"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"fructose 2,6-bisphosphate-6-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"}],"termid":"GO:0047386"}


id: PBO:0049093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 150","termid":"PBO:0049093"}


id: GO:0035961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ergosterol biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:11533229"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ergosterol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0035961)","synonyms":[{"name":"positive regulation of ergosterol anabolism by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol anabolism by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol anabolism by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol anabolism by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol biosynthetic process by activation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by positive regulation of transcription from Pol II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by stimulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by up regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by up-regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol biosynthetic process by upregulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol formation by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol formation by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol formation by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol formation by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol formation by upregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by positive regulation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"positive regulation of ergosterol synthesis by up regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by up-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of ergosterol synthesis by upregulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035961"}


id: FYPO:0000423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of endocytosis is decreased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of endocytosis during vegetative growth","synonyms":[{"name":"decreased rate of actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"decreased rate of endocytosis during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: decreased rate during vegetative growth","type":"related"},{"name":"reduced rate of endocytosis during vegetative growth","type":"exact"}],"termid":"FYPO:0000423"}


id: PBO:0043689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I1 pseudogene 2","termid":"PBO:0043689"}


id: MONDO:1011239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, pig","secondary_identifiers":["OMIA:000649-9823"],"termid":"MONDO:1011239","xrefs":{"Monarch":{"xref_id":"1011239"}}}


id: MONDO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinopathy (obsolete MONDO:0000149)","termid":"MONDO:0000149","xrefs":{"Monarch":{"xref_id":"0000149"}}}


id: GO:0019327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of lead sulfide to lead sulfate.","definition_xrefs":["MetaCyc:P301-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"lead sulfide oxidation","synonyms":[{"name":"lead sulphide oxidation","type":"exact"},{"name":"oxidation of galena","type":"exact"},{"name":"oxidation of lead sulfide","type":"exact"}],"termid":"GO:0019327"}


id: GO:0015521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (bicyclomycin or sulfathiazole)(in) + H+(out) = (bicyclomycin or sulfathiazole)(out) + H+(in).","definition_xrefs":["TC:2.A.1.2.7"],"gene_count":0,"genotype_count":0,"name":"obsolete bicyclomycin/sulfathiazole:hydrogen antiporter activity (obsolete GO:0015521)","synonyms":[{"name":"bicyclomycin/sulfathiazole:hydrogen antiporter activity","type":"exact"},{"name":"bicyclomycin/sulfathiazole:proton antiporter activity","type":"exact"},{"name":"bicyclomycin/sulphathiazole:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015521"}


id: MONDO:0006400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the salivary gland characterized by serous acinar cell differentiation. The vast majority of cases occur in the parotid gland. It usually presents as a slowly enlarging mass. A minority of patients experience pain. It may recur or metastasize. Multiple recurrences and metastasis to cervical lymph nodes are usually associated with a poor prognosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acinar cell carcinoma","termid":"MONDO:0004965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"salivary gland acinic cell carcinoma","secondary_identifiers":["NCIT:C8013","EFO:1000513","MEDGEN:79030","UMLS:C0279738"],"synonyms":[{"name":"acinic cell carcinoma of salivary gland","type":"exact"},{"name":"acinic cell carcinoma of the salivary gland","type":"exact"},{"name":"acinic cell neoplasm of salivary gland","type":"exact"},{"name":"acinic cell neoplasm of the salivary gland","type":"exact"},{"name":"acinic cell tumor of salivary gland","type":"exact"},{"name":"acinic cell tumor of the salivary gland","type":"exact"},{"name":"acinic cell tumour of salivary gland","type":"exact"},{"name":"acinic cell tumour of the salivary gland","type":"exact"},{"name":"salivary gland acinic cell cancer","type":"exact"},{"name":"salivary gland acinic cell neoplasm","type":"exact"},{"name":"salivary gland acinic cell tumor","type":"exact"},{"name":"salivary gland acinic cell tumour","type":"exact"}],"termid":"MONDO:0006400","xrefs":{"Monarch":{"xref_id":"0006400"}}}


id: PBO:0039914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 12","termid":"PBO:0039914"}


id: GO:0015514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite transmembrane transporter activity","termid":"GO:0015113"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nitrite efflux transmembrane transporter activity","synonyms":[{"name":"nitrite extrusion permease activity","type":"exact"}],"termid":"GO:0015514"}


id: PBO:0064358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-melanin concentrating hormone like 1 (pseudogene)","termid":"PBO:0064358"}


id: MONDO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive axial myopia associated with complications (especially posterior staphyloma and choroidal neovascularization) that can lead to blindness.","definition_xrefs":["MESH:D047728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"degenerative myopia","secondary_identifiers":["UMLS:C0154778","ICD9:360.21","MEDGEN:57597","DOID:11829","ICD10CM:H44.2","SCTID:32022003"],"synonyms":[{"name":"degenerative progressive high myopia","type":"exact"},{"name":"pathological myopia","type":"exact"},{"name":"progressive high (degenerative) myopia","type":"exact"},{"name":"progressive high myopia","type":"exact"}],"termid":"MONDO:0001383","xrefs":{"Monarch":{"xref_id":"0001383"}}}


id: MOD:00963
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from DeltaMass. OBSOLETE because redundant and identical to MOD:00462. Remap to MOD:00462.","definition_xrefs":["DeltaMass:357"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00963 Oxidation of Trp to kynurenine (obsolete MOD:00963)","termid":"MOD:00963"}


id: GO:0009997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast cell fate specification","termid":"GO:0042686"},{"relation_name":"is_a","term_name":"negative regulation of cardioblast differentiation","termid":"GO:0051892"},{"relation_name":"is_a","term_name":"negative regulation of cardiac cell fate specification","termid":"GO:2000044"},{"relation_name":"negatively_regulates","term_name":"cardioblast cell fate specification","termid":"GO:0042685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast cell fate specification","secondary_identifiers":["GO:0042687"],"synonyms":[{"name":"down regulation of cardioblast cell fate specification","type":"exact"},{"name":"down-regulation of cardioblast cell fate specification","type":"exact"},{"name":"downregulation of cardioblast cell fate specification","type":"exact"},{"name":"inhibition of cardioblast cell fate specification","type":"narrow"},{"name":"suppression of cardioblast cell fate","type":"exact"}],"termid":"GO:0009997"}


id: PBO:0068354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 135","termid":"PBO:0068354"}


id: FYPO:0008197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum occurs to a lower extent than normal.","definition_xrefs":["PMID:37553386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal reticulophagy during vegetative growth","termid":"FYPO:0007445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased reticulophagy during vegetative growth","termid":"FYPO:0008197"}


id: PBO:0082594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class E protein of the vacuolar protein-sorting (Vps) pathway; binds Vps4p and directs it to dissociate ESCRT-III complexes; forms a functional and physical complex with Ist1p; human ortholog may be altered in breast tumors","termid":"PBO:0082594"}


id: PBO:0087653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterohexameric cochaperone prefoldin complex; prefoldin binds specifically to cytosolic chaperonin and transfers target proteins to it; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation","termid":"PBO:0087653"}


id: GO:1901828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving zeaxanthin bis(beta-D-glucoside).","definition_xrefs":["GOC:yaf","GOC:TermGenie","MetaCyc:PWY-6288","PMID:20075616","UniPathway:UPA00798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid metabolic process","termid":"GO:0016116"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"zeaxanthin bis(beta-D-glucoside) metabolic process","synonyms":[{"name":"zeaxanthin bis(beta-D-glucoside) metabolism","type":"exact"},{"name":"zeaxanthin diglucoside metabolism","type":"exact"}],"termid":"GO:1901828"}


id: PBO:0075877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 4","termid":"PBO:0075877"}


id: PBO:0088475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery anamorsin Dre2","termid":"PBO:0088475"}


id: PBO:0044585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drebrin like","termid":"PBO:0044585"}


id: MONDO:0019018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Takotsubo cardiomyopathy (TC) is a recently described acute cardiac syndrome that mimics acute myocardial infarction and is characterized by ischemic chest symptoms, an elevated ST segment on electrocardiogram, and elevated levels of cardiac disease markers.","definition_xrefs":["Orphanet:66529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Tako-tsubo cardiomyopathy","secondary_identifiers":["EFO:1002000","ICD9:429.83","MEDGEN:366029","MESH:D054549","SCTID:441541008","UMLS:C1739395","NCIT:C85181","icd11.foundation:478139552","NORD:2006","GARD:9400"],"synonyms":[{"name":"ASC","type":"related"},{"name":"Tako tsubo syndrome","type":"related"},{"name":"Tako-Tsubo syndrome","type":"exact"},{"name":"Takotsubo Cardiomyopathy","type":"exact"},{"name":"Takotsubo cardiomyopathy","type":"exact"},{"name":"Takotsubo syndrome","type":"exact"},{"name":"acute stress cardiomyopathy","type":"related"},{"name":"ampulla cardiomyopathy","type":"exact"},{"name":"apical ballooning syndrome","type":"exact"},{"name":"ballooning cardiomyopathy","type":"exact"},{"name":"broken heart syndrome","type":"exact"},{"name":"broken-heart syndrome","type":"related"},{"name":"left ventricular transient apical ballooning","type":"related"},{"name":"stress cardiomyopathy","type":"exact"},{"name":"stress-induced cardiomyopathy","type":"related"},{"name":"transient antero-apical dyskinesia","type":"related"},{"name":"transient left ventricular apical ballooning syndrome","type":"exact"}],"termid":"MONDO:0019018","xrefs":{"Monarch":{"xref_id":"0019018"}}}


id: _global:guided_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided_by","termid":"_global:guided_by"}


id: MONDO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the pars plana.","definition_xrefs":["NCIT:C35110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"intermediate uveitis","secondary_identifiers":["DOID:12732","GARD:21065","MedDRA:10022557","Orphanet:279914","MESH:D015867","HP:0012124","MEDGEN:22596","SCTID:314429009","UMLS:C0042166","EFO:1000986"],"synonyms":[{"name":"IU","type":"exact"},{"name":"chronic cyclitis","type":"exact"},{"name":"intermediate uveitis","type":"exact"},{"name":"intermediate uveitis (disease)","type":"exact"},{"name":"pars planitis","type":"narrow"},{"name":"peripheral uveoretinitis","type":"exact"}],"termid":"MONDO:0006806","xrefs":{"Monarch":{"xref_id":"0006806"}}}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["PMID:16048999","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: GO:0000813
data:
  {"annotated_genes":["SJAG_01981","SJAG_04349"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72672,88460],"is_not":false,"summary":null,"term":"GO:0000813"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex required for transport. It consists of the class E vacuolar protein sorting (Vps) proteins and interacts with ubiquitinated cargoes.","definition_xrefs":["GOC:rb","PMID:12900393","PMID:12892785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex","termid":"GO:0036452"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01981":null,"SJAG_04349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0005575","GO:0032991","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"ESCRT I complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosomal sorting complex required for transport","type":"broad"}],"termid":"GO:0000813","terms_by_termid":{"GO:0000813":null}}


id: MONDO:0030483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive immune disorder characterized specifically by the development of disseminated mycobacterial disease following vaccination with BCG. The single patient described did not develop other clinical infectious diseases, although serology documented exposure to various viruses and bacteria. Immunologic workup shows defective development of certain innate immunologic cells and decreased production of gamma-interferon (IFNG). Additional manifestations include persistent reactive airway disease associated with increased production of Th2 cytokines.","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 88","secondary_identifiers":["MEDGEN:1794236","OMIM:619630","UMLS:C5562026"],"synonyms":[{"name":"IMD88","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to TBX21 deficiency","type":"exact"}],"termid":"MONDO:0030483","xrefs":{"Monarch":{"xref_id":"0030483"}}}


id: MONDO:0010931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets caused by a post-receptor defect in the vitamin D signaling pathway producing vitamin D resistance due to constitutive overexpression of a nuclear ribonucleoprotein that competes with the vitamin D receptor-retinoid X receptor dimer binding with DNA vitamin D response elements. This condition has a similar phenotype to vitamin D receptor deficiency rickets including elevated 1,25-dihydroxyvitamin D (calcitriol) concentrations.","definition_xrefs":["NCIT:C131076","PMID:17071612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D-dependent rickets, type 2","termid":"MONDO:0019642"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"vitamin D-dependent rickets, type 2B","secondary_identifiers":["NANDO:1200779","MEDGEN:411667","OMIM:600785","UMLS:C2748783","GARD:18170","DOID:0080885","SCTID:237895001"],"synonyms":[{"name":"VDDR2B","type":"related"},{"name":"hereditary 1,25 dihydroxyvitamin D-resistant rickets with abnormal vitamin D receptor without alopecia","type":"exact"},{"name":"vitamin D dependent rickets 2b","type":"exact"},{"name":"vitamin D receptor signaling defect rickets","type":"exact"},{"name":"vitamin D receptor signalling defect rickets","type":"exact"},{"name":"vitamin D resistant rickets","type":"exact"},{"name":"vitamin D-dependent rickets type II without alopecia","type":"exact"},{"name":"vitamin D-dependent rickets, type 2B, with normal vitamin D receptor","type":"related"}],"termid":"MONDO:0010931","xrefs":{"Monarch":{"xref_id":"0010931"}}}


id: GO:0008492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP generating peptide activity (obsolete GO:0008492)","synonyms":[{"name":"cAMP generating peptide activity","type":"exact"},{"name":"cyclic AMP generating peptide activity","type":"exact"}],"termid":"GO:0008492"}


id: GO:0031104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of dendrites in response to their loss or damage.","definition_xrefs":["GOC:tb","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"is_a","term_name":"neuron projection regeneration","termid":"GO:0031102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite regeneration","termid":"GO:0031104"}


id: MONDO:0004633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of classical Hodgkin lymphoma with scattered Reed-Sternberg and Hodgkin cells in a diffuse or vaguely nodular mixed inflammatory background without nodular sclerosing fibrosis. (WHO, 2008)","definition_xrefs":["NCIT:C3517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkin's lymphoma, mixed cellularity","secondary_identifiers":["Orphanet:98844","icd11.foundation:39515681","DOID:8654","ICDO:9652/3","ONCOTREE:MCCHL","UMLS:C0152266","GARD:19592","ICD9:201.6","EFO:1002031","SCTID:118609008","MEDGEN:57521"],"synonyms":[{"name":"Hodgkin lymphoma, mixed cellularity","type":"exact"},{"name":"Hodgkin's disease mixed cellularity","type":"exact"},{"name":"Hodgkin's disease, mixed cellularity","type":"related"},{"name":"Hodgkin's disease, mixed cellularity of unspecified site","type":"exact"},{"name":"Hodgkin's lymphoma mixed cellularity","type":"exact"},{"name":"MCCHL","type":"exact"},{"name":"MCHL","type":"exact"},{"name":"Mixed cellularity Classic Hodgkin lymphoma","type":"exact"},{"name":"classic Hodgkin lymphoma, mixed cellularity type","type":"exact"},{"name":"mixed cellularity Hodgkin lymphoma","type":"exact"},{"name":"mixed cellularity Hodgkin's disease","type":"exact"},{"name":"mixed cellularity Hodgkin's lymphoma","type":"exact"},{"name":"mixed cellularity classical Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0004633","xrefs":{"Monarch":{"xref_id":"0004633"}}}


id: GO:0072182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"}


id: GO:0008057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of intracellular pigment storage granules in the eye.","definition_xrefs":["PMID:9303295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule organization","termid":"GO:0048753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment granule organization","secondary_identifiers":["GO:0008059","GO:0045318","GO:0048751"],"synonyms":[{"name":"eye pigment granule organisation","type":"exact"},{"name":"eye pigment granule organization and biogenesis","type":"related"}],"termid":"GO:0008057"}


id: GO:0098735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the force of heart muscle contraction.","definition_xrefs":["GOC:dos","GOC:mtg_cardiac_conduct_nov11","PMID:17242280","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction","termid":"GO:0002026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction","termid":"GO:0098735"}


id: MONDO:0013262
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86524,86525],"is_not":false,"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the MYH7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1S","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613426","UMLS:C1834481","MEDGEN:371831","DOID:0110454","MESH:C563538","GARD:12832"],"synonyms":[{"name":"CMD1S","type":"exact"},{"name":"MYH7 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1S","type":"related"},{"name":"cardiomyopathy, dilated, type 1S","type":"exact"},{"name":"dilated cardiomyopathy type 1S","type":"exact"},{"name":"dilated cardiomyopathy-1S","type":"related"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in MYH7","type":"exact"},{"name":"left ventricular noncompaction 5","type":"related"}],"termid":"MONDO:0013262","terms_by_termid":{"MONDO:0013262":null},"xrefs":{"Monarch":{"xref_id":"0013262"}}}


id: GO:0052467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052467)","synonyms":[{"name":"modulation by organism of symbiont SA-mediated defense response","type":"exact"},{"name":"modulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"}],"termid":"GO:0052467"}


id: PBO:0113281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo-like kinase required for mitotic exit; regulates mitotic spindle assembly, nuclear shape, and protein localization to the nucleolus and SPBs; controls targeting and activation of Rho1p at the division site via Rho1p-GEFs; role in adaptation to DNA damage promotes genome instability during replicative senescence; regulates meiotic commitment, spindle assembly, chiasmata formation, recombination intermediate resolution and SC disassembly; human homologs PLK1 and PLK3 complement cdc5 mutants","termid":"PBO:0113281"}


id: GO:1904663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of N-terminal peptidyl-methionine acetylation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20807799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"N-terminal peptidyl-methionine acetylation","termid":"GO:0017196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of N-terminal peptidyl-methionine acetylation","termid":"GO:1904663"}


id: GO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + 2-oxoglutarate + O2 = a flavone + succinate + CO2 + H2O.","definition_xrefs":["EC:1.14.20.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"flavone synthase activity","secondary_identifiers":["RHEA:10448","MetaCyc:RXN-8000"],"synonyms":[{"name":"FNS I","type":"related"},{"name":"flavanone,2-oxoglutarate:oxygen oxidoreductase (dehydrating) activity","type":"related"},{"name":"flavone synthase I activity","type":"related"}],"termid":"GO:0033759"}


id: MONDO:0014975
data:
  {"annotated_genes":["SJAG_03866","SJAG_04757"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87341,87342],"is_not":false,"summary":null,"term":"MONDO:0014975"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ATP13A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 78","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:513436","MEDGEN:1799316","OMIM:617225","GARD:17952","DOID:0112348","UMLS:C5567893"],"synonyms":[{"name":"ATP13A2 hereditary spastic paraplegia","type":"exact"},{"name":"SPG78","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in ATP13A2","type":"exact"},{"name":"spastic paraplegia 78, autosomal recessive","type":"exact"},{"name":"spastic paraplegia 78, autosomal recessive; SPG78","type":"exact"}],"termid":"MONDO:0014975","terms_by_termid":{"MONDO:0014975":null},"xrefs":{"Monarch":{"xref_id":"0014975"}}}


id: PBO:0110115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ras-interacting protein with DIL domain, human RADIL and RASIP1 ortholog (predicted), implicated in cytoskeleton organization","termid":"PBO:0110115"}


id: PBO:0062553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily R member 1 pseudogene","termid":"PBO:0062553"}


id: PBO:0047983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member K, pseudogene","termid":"PBO:0047983"}


id: GO:0097699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to fluid shear stress in a vascular endothelial cell.","definition_xrefs":["PMID:21768538","GOC:bc","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to fluid shear stress","type":"exact"}],"termid":"GO:0097699"}


id: PBO:0067287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 370, pseudogene","termid":"PBO:0067287"}


id: PBO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 1","termid":"PBO:0075303"}


id: MONDO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormality in lung development that is characterized by a multicystic mass resulting from an adenomatous overgrowth of the terminal bronchioles with a consequent reduction of pulmonary alveoli. This anomaly is classified into three types by the cyst size.","definition_xrefs":["MESH:D015615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation","secondary_identifiers":["icd11.foundation:2091138945","NCIT:C98892","GARD:18772","SCTID:111318005","UMLS:C0010668","Orphanet:2444","MEDGEN:8225"],"synonyms":[{"name":"CCAM","type":"exact"},{"name":"CPAM","type":"exact"},{"name":"congenital cystic adenomatoid malformation","type":"related"},{"name":"congenital cystic adenomatoid malformation of lung","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung","type":"exact"},{"name":"congenital cystic disease of the lung","type":"exact"},{"name":"cystic adenomatoid malformation of lung","type":"related"}],"termid":"MONDO:0016580","xrefs":{"Monarch":{"xref_id":"0016580"}}}


id: GO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, Rab3a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a-complexin II complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2, CPLX2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2-CPLX2 complex","type":"narrow"}],"termid":"GO:0070355"}


id: PBO:0079404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 7 pseudogene","termid":"PBO:0079404"}


id: FYPO:0001864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation takes place in cells that are not subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mating without glucose starvation","synonyms":[{"name":"conjugation without glucose starvation","type":"exact"},{"name":"mating in the absence of glucose starvation","type":"exact"},{"name":"mating without glucose depletion","type":"exact"},{"name":"mating without glucose deprivation","type":"exact"}],"termid":"FYPO:0001864"}


id: PBO:0013753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciclin domain protein Fsc1","termid":"PBO:0013753"}


id: GO:2000469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of peroxidase activity (obsolete GO:2000469)","synonyms":[{"name":"negative regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"negative regulation of oxyperoxidase activity","type":"exact"},{"name":"negative regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000469"}


id: PBO:0029091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules","termid":"PBO:0029091"}


id: PBO:0059469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 1","termid":"PBO:0059469"}


id: PBO:0080870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YKT6 v-SNARE homolog","termid":"PBO:0080870"}


id: MONDO:0014666
data:
  {"annotated_genes":["SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85488],"is_not":false,"summary":null,"term":"MONDO:0014666"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the POLR1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"POLR1C-related disorder","termid":"MONDO:0700278"},{"relation_name":"is_a","term_name":"POLR3-related leukodystrophy","termid":"MONDO:0700282"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18088","DOID:0060792","MEDGEN:897960","UMLS:C4225305","OMIM:616494"],"synonyms":[{"name":"HLD11","type":"exact"},{"name":"POLR1C leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 11","type":"exact"},{"name":"leukodystrophy caused by mutation in POLR1C","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 11","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 11","type":"exact"}],"termid":"MONDO:0014666","terms_by_termid":{"MONDO:0014666":null},"xrefs":{"Monarch":{"xref_id":"0014666"}}}


id: PBO:0069090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 337, pseudogene","termid":"PBO:0069090"}


id: PBO:0064385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 7","termid":"PBO:0064385"}


id: PR:O43037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mnh1 gene.","definition_xrefs":["UniProtKB:O43037","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mago nashi homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.08c","synonyms":[{"name":"Spom972h-mnh1","type":"exact"}],"termid":"PR:O43037"}


id: SO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in an insulator region of a nucleotide molecule, interacts selectively and non-covalently with polypeptide residues.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_to_protein_binding_site","termid":"SO:0001654"},{"relation_name":"part_of","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulator_binding_site","synonyms":[{"name":"insulator binding site","type":"related"}],"termid":"SO:0001460"}


id: PBO:0078899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-3","termid":"PBO:0078899"}


id: GO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeletal joints over time, from formation to mature structure.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system development","termid":"GO:0048706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal joint development","termid":"GO:0072498"}


id: PBO:0039703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin and PNKP like factor","termid":"PBO:0039703"}


id: PBO:0073279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14","termid":"PBO:0073279"}


id: MOD:01079
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-[(acetylamino)methyl]-L-cysteine.","definition_xrefs":["DeltaMass:218","PubMed:8572278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(acetylamino)methyl-L-cysteine","synonyms":[{"name":"Acetamidomethyl Cystenyl","type":"exact"},{"name":"Acm-Cys","type":"exact"},{"name":"N-(hydroxymethyl)acetamide derivatized L-cysteine","type":"exact"},{"name":"S-(acetamido)methyl-L-cysteine","type":"exact"}],"termid":"MOD:01079"}


id: GO:0043033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram-negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages.","definition_xrefs":["GOC:jl","PMID:10333591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"isoamylase complex","synonyms":[{"name":"debranching enzyme complex","type":"broad"}],"termid":"GO:0043033"}


id: PBO:0083265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 69% of ORF overlaps the uncharacterized ORF YKL075C","termid":"PBO:0083265"}


id: PBO:0080232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"very low density lipoprotein receptor","termid":"PBO:0080232"}


id: GO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GPR37/endothelin B-like receptor activity (obsolete GO:0001606)","synonyms":[{"name":"GPR37/endothelin B-like receptor activity","type":"exact"}],"termid":"GO:0001606"}


id: PBO:0031326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cycloheximide","termid":"PBO:0031326"}


id: MONDO:0007485
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86258],"is_not":false,"summary":null,"term":"MONDO:0007485"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of TERC on chromosome 3q26.2.","definition_xrefs":["DOID:0070014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:127550","SCTID:707273001","UMLS:C4551974","GARD:6299","NCIT:C176921","MEDGEN:1645250","MESH:C565079"],"synonyms":[{"name":"DKCA","type":"related"},{"name":"DKCA1","type":"exact"},{"name":"autosomal dominant dyskeratosis congenita","type":"related"},{"name":"autosomal dominant dyskeratosis congenita 1","type":"related"},{"name":"dyskeratosis congenita Scoggins type","type":"related"},{"name":"dyskeratosis congenita autosomal dominant","type":"related"},{"name":"dyskeratosis congenita, Scoggins type","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant 1","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant type 1","type":"exact"}],"termid":"MONDO:0007485","terms_by_termid":{"MONDO:0007485":null},"xrefs":{"Monarch":{"xref_id":"0007485"}}}


id: GO:0033745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + thioredoxin disulfide + H2O = L-methionine (R)-S-oxide + thioredoxin.","definition_xrefs":["EC:1.8.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-methionine-(R)-S-oxide reductase activity","secondary_identifiers":["RHEA:21260","MetaCyc:1.8.4.14-RXN"],"synonyms":[{"name":"FRMsr","type":"related"},{"name":"L-methionine:thioredoxin-disulfide S-oxidoreductase [L-methionine (R)-S-oxide-forming] activity","type":"related"},{"name":"free met-R-(o) reductase activity","type":"related"},{"name":"free-methionine (R)-S-oxide reductase activity","type":"related"},{"name":"methionine-R-sulfoxide reductase activity","type":"related"}],"termid":"GO:0033745"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + an all-trans-polyprenyl diphosphate + H+ = a 2-demethylmenaquinol + CO2 + diphosphate.","definition_xrefs":["RHEA:26478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate polyprenyltransferase activity","secondary_identifiers":["EC:2.5.1.74","MetaCyc:RXN-11047"],"synonyms":[{"name":"1,4-dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: MONDO:0016683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse glial tumor which infiltrates the brain extensively, involving more than two lobes. It is frequently bilateral and often extends to the infratentorial structures, even to the spinal cord. It is probably of astrocytic origin, although GFAP expression may be scant or absent. (Adapted from WHO.)","definition_xrefs":["NCIT:C4318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioma","termid":"MONDO:0005499"},{"relation_name":"is_a","term_name":"high grade astrocytic tumor","termid":"MONDO:0016680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gliomatosis cerebri","secondary_identifiers":["GARD:6514","ICDO:9381/3","MedDRA:10066254","UMLS:C0334576","icd11.foundation:373131154","MEDGEN:87267","DOID:6128","Orphanet:251582"],"synonyms":[{"name":"astrocytosis cerebri","type":"exact"},{"name":"gliomatosis","type":"exact"},{"name":"gliomatosis cerebri","type":"exact"},{"name":"gliomatosis cerebri (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0016683","xrefs":{"Monarch":{"xref_id":"0016683"}}}


id: SO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in which two or more pairs of homologous markers occur on the same chromosome in two or more species.","direct_ancestors":[{"relation_name":"has_quality","term_name":"syntenic","termid":"SO:0000860"},{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntenic_region","synonyms":[{"name":"syntenic region","type":"exact"}],"termid":"SO:0005858"}


id: GO:0102044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chlorobenzoate + O2 + a reduced electron acceptor = 3-chlorobenzoate-cis-4,5-diol + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-chlorobenzoate-4,5-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10421"],"termid":"GO:0102044"}


id: PATO:0002300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased quality","termid":"PATO:0002300"}


id: GO:0015339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Co2+)(out) = (Zn2+ or Co2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cobalt, zinc uptake permease activity (obsolete GO:0015339)","synonyms":[{"name":"cobalt, zinc uptake permease activity","type":"exact"}],"termid":"GO:0015339"}


id: GO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hydrogen ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hydrogen ion","termid":"GO:0003030"}


id: PBO:0078559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 47","termid":"PBO:0078559"}


id: MONDO:0009604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary methemoglobinemia","termid":"MONDO:0018963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"methemoglobin reductase deficiency","secondary_identifiers":["MEDGEN:501116","MESH:C563171","SCTID:234397008","GARD:3909","OMIM:250700","UMLS:C0472786"],"synonyms":[{"name":"NADPH-dependent methemoglobin reductase deficiency","type":"related"},{"name":"TPNH-methemoglobin reductase deficiency","type":"related"},{"name":"methemoglobin reductase deficiency","type":"exact"}],"termid":"MONDO:0009604","xrefs":{"Monarch":{"xref_id":"0009604"}}}


id: PBO:0043875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 3","termid":"PBO:0043875"}


id: PBO:0071145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 8","termid":"PBO:0071145"}


id: MONDO:0020686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammation of the tonsils caused by viruses or bacteria. Signs and symptoms include fever, enlargement of the tonsils, difficulty swallowing, and enlargement of the regional lymph nodes.","definition_xrefs":["NCIT:C97142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsillitis","termid":"MONDO:0001039"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute tonsillitis","secondary_identifiers":["SCTID:17741008","UMLS:C0001361","ICD9:463","icd11.foundation:260431605","MEDGEN:472878"],"synonyms":[{"name":"acute adenoiditis","type":"narrow"},{"name":"acute tonsillitis","type":"exact"},{"name":"infective tonsillitis","type":"related"}],"termid":"MONDO:0020686","xrefs":{"Monarch":{"xref_id":"0020686"}}}


id: GO:0018396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-lysine to peptidyl-4-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0235"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine hydroxylation to 4-hydroxy-L-lysine (obsolete GO:0018396)","termid":"GO:0018396"}


id: PBO:0084195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H3 acetylase with a role in transcriptional regulation; sequence-specific activator of histone genes, binds specifically and cooperatively to pairs of UAS elements in core histone promoters, functions at or near TATA box; involved in S phase-specific acetylation of H3K56 at histone promoters, which is required for recruitment of SWI/SNF nucleosome remodeling complex and subsequent transcription","termid":"PBO:0084195"}


id: PBO:0081004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 41","termid":"PBO:0081004"}


id: GO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to, and maintained in the anterior portion of the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"anterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060813"}


id: PATO:0001435
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having connection or association with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attachment quality","termid":"PATO:0001435"}


id: PBO:0063103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase pseudogene 1","termid":"PBO:0063103"}


id: SO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An U-box is a conserved T-rich region upstream of a retroviral polypurine tract that is involved in PPT primer creation during reverse transcription.","definition_xrefs":["PMID:9649446","PMID:10556309","PMID:11577982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U_box","synonyms":[{"name":"U-box","type":"exact"}],"termid":"SO:0001788"}


id: GO:0033243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways leading to the breakdown of amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"positively_regulates","term_name":"amine catabolic process","termid":"GO:0009310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine catabolic process","synonyms":[{"name":"positive regulation of amine breakdown","type":"exact"},{"name":"positive regulation of amine catabolism","type":"exact"},{"name":"positive regulation of amine degradation","type":"exact"}],"termid":"GO:0033243"}


id: GO:0033687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of osteoblasts, resulting in the expansion of an osteoblast cell population. An osteoblast is a bone-forming cell which secretes an extracellular matrix. Hydroxyapatite crystals are then deposited into the matrix to form bone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast proliferation","termid":"GO:0033687"}


id: FYPO:0002672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing rapamycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on rapamycin","synonyms":[{"name":"normal cell population growth in presence of rapamycin","type":"exact"},{"name":"normal cell population growth on rapamycin","type":"exact"},{"name":"normal cellular response to rapamycin","type":"related"},{"name":"normal vegetative cell population growth on rapamycin","type":"exact"}],"termid":"FYPO:0002672"}


id: MONDO:0850197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and TP53 mutations that may be present or absent.","definition_xrefs":["DOID:0080703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated","secondary_identifiers":["MEDGEN:1375478","NCIT:C129441","UMLS:C4330671"],"termid":"MONDO:0850197","xrefs":{"Monarch":{"xref_id":"0850197"}}}


id: GO:0044669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sodium(out)+ galactoside(out) = sodium(in) + galactoside(in).","definition_xrefs":["GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:galactoside symporter activity","termid":"GO:0044669"}


id: MONDO:0000146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progeroid syndrome (obsolete MONDO:0000146)","termid":"MONDO:0000146","xrefs":{"Monarch":{"xref_id":"0000146"}}}


id: MOD:02034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(3) HexNAc(6)","definition_xrefs":["Unimod:1781","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex3HexNAc6 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(3) HexNAc(6)","type":"related"}],"termid":"MOD:02034"}


id: GO:0032933
data:
  {"annotated_genes":["SJAG_01657","SJAG_03302","SJAG_00718","SJAG_04018","SJAG_03501","SJAG_00642","SJAG_01307","SJAG_04151","SJAG_04384","SJAG_03345","SJAG_04573","SJAG_01253","SJAG_02703","SJAG_01150","SJAG_00293","SJAG_05304","SJAG_01585","SJAG_02104","SJAG_05286"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63986,65085,69144,89327,89606,89991,92984,94227,102428,104290,112870,113122,116692,118532,118740],"is_not":false,"summary":null,"term":"GO:0032933"},{"annotations":[91578,106219,112021],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000639"},{"annotations":[78723],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000640"}]},"cv_name":"biological_process","definition":"The series of molecular signals from the endoplasmic reticulum to the nucleus generated as a consequence of decreased levels of one or more sterols (and in some yeast, changes in oxygen levels) and which proceeds through activation of a sterol response element binding transcription factor (SREBP) to result in up-regulation of target gene transcription.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:12923525","GOC:mah","GOC:vw","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"cellular response to sterol depletion","termid":"GO:0071501"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00642":null,"SJAG_00718":null,"SJAG_01150":null,"SJAG_01253":null,"SJAG_01307":null,"SJAG_01585":null,"SJAG_01657":null,"SJAG_02104":null,"SJAG_02703":null,"SJAG_03302":null,"SJAG_03345":null,"SJAG_03501":null,"SJAG_04018":null,"SJAG_04151":null,"SJAG_04384":null,"SJAG_04573":null,"SJAG_05286":null,"SJAG_05304":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"SREBP signaling pathway","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030967","GO:0006994","GO:0035104"],"synonyms":[{"name":"ER to nucleus sterol response pathway","type":"exact"},{"name":"ER-nuclear sterol response pathway","type":"exact"},{"name":"SREBP signalling","type":"exact"},{"name":"SREBP target gene transcriptional activation","type":"exact"},{"name":"SREBP-mediated signaling pathway","type":"related"},{"name":"SREBP-mediated signalling pathway","type":"exact"},{"name":"activation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"endoplasmic reticulum to nucleus sterol response pathway","type":"exact"},{"name":"endoplasmic reticulum-nuclear sterol response pathway","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"positive regulation of sterol regulatory element binding protein target gene transcription involved in sterol depletion response","type":"exact"},{"name":"positive regulation of transcription via sterol regulatory element binding","type":"narrow"},{"name":"positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway","type":"narrow"},{"name":"sterol depletion response, SREBP target gene transcriptional activation","type":"exact"},{"name":"sterol regulatory element binding protein target gene transcriptional activation","type":"broad"},{"name":"sterol response element binding protein signaling pathway","type":"exact"},{"name":"stimulation of sterol regulatory element binding protein target gene transcription","type":"narrow"},{"name":"up regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein target gene transcription","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein target gene transcription","type":"exact"}],"termid":"GO:0032933","terms_by_termid":{"GO:0032933":null,"GO:2000639":null,"GO:2000640":null}}


id: GO:0021946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the ventricular zone to the deep hindbrain nuclei.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron cell migration","termid":"GO:0021946"}


id: PBO:0046929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member C","termid":"PBO:0046929"}


id: PBO:0040310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 2","termid":"PBO:0040310"}


id: PBO:0066581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD9-HUS1-RAD1 interacting nuclear orphan 1","termid":"PBO:0066581"}


id: PBO:0045622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 34 (pseudogene)","termid":"PBO:0045622"}


id: FYPO:0006359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of a protein in cis and trans between heterochromatin domains occurs to a lower extent than normal in regions of pericentric heterochromatin.","definition_xrefs":["GO:0005721","PMID:26438724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal dynamic protein localization pattern","termid":"FYPO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein exchange at pericentric heterochromatin","synonyms":[{"name":"decreased protein exchange at centromeric heterochromatin","type":"exact"},{"name":"decreased protein exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein exchange at pericentric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased protein motility on centromeric heterochromatin","type":"exact"},{"name":"reduced protein exchange at pericentric heterochromatin","type":"exact"}],"termid":"FYPO:0006359"}


id: GO:0060265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of respiratory burst involved in inflammatory response","termid":"GO:0060264"},{"relation_name":"is_a","term_name":"positive regulation of respiratory burst","termid":"GO:0060267"},{"relation_name":"positively_regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"positive regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060265"}


id: GO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycocyanobilin to phycocyanin or allophycocyanin.","definition_xrefs":["RESID:AA0131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycocyanobilin linkage","termid":"GO:0017009"}


id: MONDO:0850287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intrinsic asthma that is characertized by severe and prolonged airway obstruction after the ingestion of aspirin or other non-steroidal anti-inflammatory drugs.","definition_xrefs":["DOID:0080822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic asthma","termid":"MONDO:0004765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspirin-induced respiratory disease","termid":"MONDO:0850287","xrefs":{"Monarch":{"xref_id":"0850287"}}}


id: MONDO:1010517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly, non-human animal","termid":"MONDO:1010033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly, horse","secondary_identifiers":["OMIA:000478-9796"],"termid":"MONDO:1010517","xrefs":{"Monarch":{"xref_id":"1010517"}}}


id: PBO:0005825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase family protein, omega-amidase related (predicted)","termid":"PBO:0005825"}


id: PBO:0062081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 12 pseudogene","termid":"PBO:0062081"}


id: MONDO:0010100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM2 gangliosidosis, variant B or Tay-Sachs disease is marked by accumulation of G2 gangliosides due to hexosaminidase A deficiency.","definition_xrefs":["Orphanet:845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"GM2 gangliosidosis","termid":"MONDO:0017720"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005328","MONDO:0005559","MONDO:0005066","MONDO:0002561","MONDO:0002525","MONDO:0002039"],"is_obsolete":false,"name":"Tay-Sachs disease","secondary_identifiers":["MedDRA:10043147","icd11.foundation:215008783","UMLS:C0039373","MESH:D013661","DOID:3320","GARD:7737","ICD10CM:E75.02","NANDO:2201199","SCTID:111385000","SCTID:49562005","NANDO:1200071","NCIT:C85184","MEDGEN:11713","OMIM:272800","NORD:1761"],"synonyms":[{"name":"B variant GM2 gangliosidosis","type":"related"},{"name":"B variant GM2-gangliosidosis","type":"related"},{"name":"GM2 gangliosidosis, B, B1 variant","type":"exact"},{"name":"GM2 gangliosidosis, type 1","type":"related"},{"name":"GM2-gangliosidosis, adult chronic type","type":"related"},{"name":"GM2-gangliosidosis, several forms","type":"exact"},{"name":"GM2-gangliosidosis, type 1","type":"related"},{"name":"GM2-gangliosidosis, variant B1","type":"related"},{"name":"Hex A pseudodeficiency","type":"exact"},{"name":"TAY-Sachs disease","type":"related"},{"name":"TSD","type":"related"},{"name":"Tay Sachs Disease","type":"exact"},{"name":"Tay-Sachs disease","type":"exact"},{"name":"Tay-Sachs disease, juvenile","type":"related"},{"name":"Tay-Sachs disease, pseudo-Ab variant","type":"related"},{"name":"Tay-Sachs disease, variant B1","type":"related"},{"name":"disease, Tay-Sachs","type":"exact"},{"name":"gangliosidosis GM2, type 1","type":"related"},{"name":"hexa deficiency","type":"related"},{"name":"hexosaminidase A deficiency","type":"exact"},{"name":"hexosaminidase a deficiency","type":"related"},{"name":"hexosaminidase a deficiency, adult type","type":"related"},{"name":"hexosaminidase alpha-subunit deficiency (variant B)","type":"related"},{"name":"sphingolipidosis, Tay-Sachs","type":"related"}],"termid":"MONDO:0010100","xrefs":{"Monarch":{"xref_id":"0010100"}}}


id: PBO:0076492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell-interacting, activating receptor on myeloid cells 1","termid":"PBO:0076492"}


id: GO:0036346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-cysteine stimulus. L-cysteine is an optically active form of cysteine having L-configuration.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to L-cysteine","termid":"GO:1901367"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-cysteine","termid":"GO:0036346"}


id: GO:1902358
data:
  {"annotated_genes":["SJAG_01941","SJAG_00671","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61887],"is_not":false,"summary":null,"term":"GO:1902358"},{"annotations":[88754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[110430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate across a membrane.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:9055073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulphate transport","type":"exact"}],"termid":"GO:1902358","terms_by_termid":{"GO:1902358":null,"GO:1902434":null,"GO:1990557":null}}


id: GO:1901248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung ciliated cell differentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung ciliated cell differentiation","termid":"GO:1901246"},{"relation_name":"positively_regulates","term_name":"lung ciliated cell differentiation","termid":"GO:0061141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung ciliated cell differentiation","synonyms":[{"name":"activation of lung ciliated cell differentiation","type":"narrow"},{"name":"up regulation of lung ciliated cell differentiation","type":"exact"},{"name":"up-regulation of lung ciliated cell differentiation","type":"exact"},{"name":"upregulation of lung ciliated cell differentiation","type":"exact"}],"termid":"GO:1901248"}


id: PBO:0045691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain roadblock-type 2","termid":"PBO:0045691"}


id: PBO:0056308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 4","termid":"PBO:0056308"}


id: PBO:0069691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 970, pseudogene","termid":"PBO:0069691"}


id: PR:Q96VG0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.19 gene.","definition_xrefs":["UniProtKB:Q96VG0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16G5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.19","synonyms":[{"name":"Spom972h-SPBC16G5.19","type":"exact"}],"termid":"PR:Q96VG0"}


id: PATO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001228 dull (obsolete PATO:0001228)","termid":"PATO:0001228"}


id: GO:2001170
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ATP biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide biosynthetic process","termid":"GO:1900372"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"negatively_regulates","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of ATP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of ATP anabolism","type":"exact"},{"name":"negative regulation of ATP biosynthesis","type":"exact"},{"name":"negative regulation of ATP formation","type":"exact"},{"name":"negative regulation of ATP regeneration","type":"related"},{"name":"negative regulation of ATP synthesis","type":"exact"}],"termid":"GO:2001170","terms_by_termid":{"GO:1905707":null}}


id: PBO:0004742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase copper chaperone Cox17 (predicted)","termid":"PBO:0004742"}


id: PATO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being oval and a little angular in the middle.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parallelogram","termid":"PATO:0002317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid","termid":"PATO:0001938"}


id: MONDO:1012724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa that occurs in horses due to a mutation in the LAMA3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctional epidermolysis bullosa, LAMA3-related, horse","secondary_identifiers":["OMIA:001677-9796"],"synonyms":[{"name":"epidermolysis bullosa, junctionalis, LAMA3-related, horse","type":"exact"},{"name":"epitheliogenesis imperfecta, horse","type":"related"}],"termid":"MONDO:1012724","xrefs":{"Monarch":{"xref_id":"1012724"}}}


id: PATO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single physical entity inhering in a bearer by virtue of whether the bearer is essential or indispensable.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necessity (continuant)","termid":"PATO:0001634"}


id: PBO:0088320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DDHD family phospholipase","termid":"PBO:0088320"}


id: PBO:0044766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 50","termid":"PBO:0044766"}


id: PBO:0064879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 42","termid":"PBO:0064879"}


id: PBO:0027987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_enlarged_around_nucleus","termid":"PBO:0027987"}


id: PBO:0065483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 2","termid":"PBO:0065483"}


id: PBO:0031630
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spore_germination_frequency","termid":"PBO:0031630"}


id: PATO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's lacking odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorless","termid":"PATO:0001208"}


id: GO:0004952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neurotransmitter dopamine to initiate a change in cell activity.","definition_xrefs":["IUPHAR_GPCR:1282","PMID:21711983","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"dopamine neurotransmitter receptor activity","termid":"GO:0004952"}


id: PBO:0046253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 2","termid":"PBO:0046253"}


id: PBO:0051644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impact RWD domain protein","termid":"PBO:0051644"}


id: SO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated at transcription.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_regulated","synonyms":[{"name":"transcriptionally regulated","type":"exact"}],"termid":"SO:0000123"}


id: PBO:0065387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSIP1 pseudogene 1","termid":"PBO:0065387"}


id: PBO:0069692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 971, pseudogene","termid":"PBO:0069692"}


id: PBO:0034659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_segregation_during_meiosis_I_with_split_kinetochore_and_equational_sister_chromatid_separation","termid":"PBO:0034659"}


id: PBO:0071317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene","termid":"PBO:0071317"}


id: GO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter and stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:dph","PMID:15302821"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ceramide biosynthetic process by negative regulation of transcription from RNA Polymerase II promoter (obsolete GO:0061427)","termid":"GO:0061427"}


id: PBO:0028076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0028076"}


id: PBO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.4","termid":"PBO:0001198"}


id: MONDO:0975834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 128","secondary_identifiers":["OMIM:620983"],"termid":"MONDO:0975834","xrefs":{"Monarch":{"xref_id":"0975834"}}}


id: PBO:0043265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 24","termid":"PBO:0043265"}


id: GO:0019407
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexitols, any alditol with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"},{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"hexitol catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"hexitol breakdown","type":"exact"},{"name":"hexitol catabolism","type":"exact"},{"name":"hexitol degradation","type":"exact"}],"termid":"GO:0019407","terms_by_termid":{"GO:0006062":null}}


id: PBO:0040672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31","termid":"PBO:0040672"}


id: PR:O94585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein C1442.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.13c","synonyms":[{"name":"Spom972h-SPCC1442.13c","type":"exact"},{"name":"meiotic chromosome segregation protein C1442.13c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94585"}


id: PBO:0059657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 23","termid":"PBO:0059657"}


id: GO:0033493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of esculetin, 6,7-dihydroxycoumarin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coumarin biosynthetic process","termid":"GO:0009805"},{"relation_name":"is_a","term_name":"esculetin metabolic process","termid":"GO:0033492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"esculetin biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5349"],"synonyms":[{"name":"esculetin anabolism","type":"exact"},{"name":"esculetin biosynthesis","type":"exact"},{"name":"esculetin formation","type":"exact"},{"name":"esculetin synthesis","type":"exact"}],"termid":"GO:0033493"}


id: GO:0070659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of lost or destroyed inner ear sensory epithelia.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear sensory epithelium regeneration","termid":"GO:0070659"}


id: GO:0004308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.","definition_xrefs":["EC:3.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-sialidase activity","termid":"GO:0016997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"exo-alpha-sialidase activity","secondary_identifiers":["Reactome:R-HSA-4084999","Reactome:R-HSA-4341669","Reactome:R-HSA-4084994","Reactome:R-HSA-1605723","Reactome:R-HSA-4085029","Reactome:R-HSA-1605724","MetaCyc:3.2.1.18-RXN","Reactome:R-HSA-9638120","Reactome:R-HSA-1605768","Reactome:R-HSA-168870"],"synonyms":[{"name":"N-acylneuraminate glycohydrolase activity","type":"related"},{"name":"acetylneuraminidase activity","type":"related"},{"name":"acetylneuraminyl hydrolase activity","type":"related"},{"name":"alpha-neuraminidase activity","type":"related"},{"name":"neuraminidase activity","type":"related"},{"name":"sialidase activity","type":"related"}],"termid":"GO:0004308"}


id: GO:0090436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf pavement cell development","termid":"GO:0090436"}


id: GO:0018389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The deamination of the N-terminal valine residue of a protein to form isobutyrate.","definition_xrefs":["GOC:mah","GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-valine deamination (obsolete GO:0018389)","termid":"GO:0018389"}


id: PBO:0086630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; mRNA is enriched in Scp160p-associated mRNPs; YIL161W is a non-essential gene","termid":"PBO:0086630"}


id: GO:0061045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of events that restore integrity to a damaged tissue, following an injury.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of wound healing","termid":"GO:0061045"}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: PBO:0063792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20 like 1","termid":"PBO:0063792"}


id: PBO:0075163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 19","termid":"PBO:0075163"}


id: GO:0052321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phytoalexin metabolic process (obsolete GO:0052321)","synonyms":[{"name":"down regulation of phytoalexin metabolism","type":"exact"},{"name":"down-regulation of phytoalexin metabolism","type":"exact"},{"name":"downregulation of phytoalexin metabolism","type":"exact"},{"name":"inhibition of phytoalexin metabolism","type":"narrow"},{"name":"negative regulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052321"}


id: PBO:0004767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-RBZ","termid":"PBO:0004767"}


id: PBO:0046614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group MER61 member 1","termid":"PBO:0046614"}


id: PBO:0070503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 2","termid":"PBO:0070503"}


id: GO:0030284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A nuclear receptor activity regulated by estrogen binding and modulating the transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["GOC:signaling","PMID:17615392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear steroid receptor activity","termid":"GO:0003707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"nuclear estrogen receptor activity","synonyms":[{"name":"estrogen receptor activity","type":"broad"}],"termid":"GO:0030284"}


id: PBO:0078637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 11","termid":"PBO:0078637"}


id: GO:0030093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Photosystem located in the chloroplast that functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem I","termid":"GO:0009522"},{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chloroplast photosystem I","termid":"GO:0030093"}


id: PBO:0074672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 58","termid":"PBO:0074672"}


id: FYPO:0003965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}


id: GO:0038070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation and activation of a MAP kinase kinase (MAPKK), as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038070)","synonyms":[{"name":"MAP kinase kinase kinase activity involved in cell wall biogenesis","type":"exact"},{"name":"MAP3K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038070"}


id: FYPO:0001037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth during cellular response to salt stress","synonyms":[{"name":"normal cell population growth during cellular response to ionic osmotic stress","type":"exact"},{"name":"normal cell population growth during cellular response to salt stress","type":"exact"},{"name":"normal cellular response to salt stress","type":"related"},{"name":"normal cellular salinity response","type":"related"},{"name":"normal vegetative cell population growth during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001037"}


id: PR:O14243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.12","secondary_identifiers":["UniProtKB:O14243"],"synonyms":[{"name":"Spom972h-SNX30","type":"exact"},{"name":"autophagy-related protein 24 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14243"}


id: GO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the bundle of His over time, from its formation to the mature structure. The bundle of His is part of the His-Purkinje system that transmits signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue development","termid":"GO:0003229"},{"relation_name":"part_of","term_name":"His-Purkinje system development","termid":"GO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His development","synonyms":[{"name":"atrioventricular bundle development","type":"exact"}],"termid":"GO:0003166"}


id: GO:0044151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of an organism occurring on or near the exterior of its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of host on or near symbiont surface (obsolete GO:0044151)","synonyms":[{"name":"growth of organism on or near symbiont surface","type":"exact"}],"termid":"GO:0044151"}


id: MONDO:0019425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked intellectual disability-hypotonia-facial dysmorphism-aggressive behavior syndrome (obsolete MONDO:0019425)","termid":"MONDO:0019425","xrefs":{"Monarch":{"xref_id":"0019425"}}}


id: PBO:0028788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_heterochromatin_assembly","termid":"PBO:0028788"}


id: PBO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex ATP-dependent RNA helicase (predicted)","termid":"PBO:0001280"}


id: MONDO:0015202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete babesiosis (obsolete MONDO:0015202)","termid":"MONDO:0015202","xrefs":{"Monarch":{"xref_id":"0015202"}}}


id: MONDO:0009981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinitis pigmentosa type 1 (obsolete MONDO:0009981)","termid":"MONDO:0009981","xrefs":{"Monarch":{"xref_id":"0009981"}}}


id: PBO:0065122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKCZ divergent transcript","termid":"PBO:0065122"}


id: GO:0021893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a neuroblast becomes restricted such that it will develop into a GABAergic interneuron residing in the cerebral cortex.","definition_xrefs":["GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"cerebral cortex GABAergic interneuron differentiation","termid":"GO:0021892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex GABAergic interneuron fate commitment","termid":"GO:0021893"}


id: MONDO:0100030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An epilepsy syndrome that has an onset during the adolescent or adult stage of life.","gene_count":0,"genotype_count":0,"name":"obsolete adolescent/adult-onset epilepsy syndrome (obsolete MONDO:0100030)","termid":"MONDO:0100030","xrefs":{"Monarch":{"xref_id":"0100030"}}}


id: RO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved_in p if and only if c enables some process p', and p' is part of p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"RO:0002431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in","termid":"RO:0002331"}


id: GO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-E-beta-caryophyllene + diphosphate.","definition_xrefs":["MetaCyc:RXN-8414","PMID:9442047","PMID:12566586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674","GO:0009975"],"is_obsolete":false,"name":"(-)-E-beta-caryophyllene synthase activity","secondary_identifiers":["RHEA:28294","EC:4.2.3.57"],"termid":"GO:0080016"}


id: MONDO:0005645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection by hookworms of the genus Ancylostoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ancylostomiasis","secondary_identifiers":["icd11.foundation:1542252776","UMLS:C0002831","ICD9:126.8","MedDRA:10002255","MEDGEN:1522","MESH:D000724","EFO:0007145","NCIT:C35805","ICD10CM:B76.1","DOID:12841","GARD:9742","Orphanet:78","ICD9:126.9","MedDRA:10020376","SCTID:63479002"],"synonyms":[{"name":"Ancylostoma caused disease or disorder","type":"exact"},{"name":"Ancylostoma disease or disorder","type":"exact"},{"name":"Ancylostoma duodenale infection","type":"related"},{"name":"Ancylostoma infectious disease","type":"exact"},{"name":"hookworm infection","type":"broad"}],"termid":"MONDO:0005645","xrefs":{"Monarch":{"xref_id":"0005645"}}}


id: PBO:0091910
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD Finger protein","termid":"PBO:0091910"}


id: PBO:0085203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein that forms a complex with Mcm16p and Mcm22p; may bind the kinetochore to spindle microtubules; required for the spindle assembly checkpoint; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-I and fission yeast mis6","termid":"PBO:0085203"}


id: PBO:0085439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A)RNA binding protein involved in nuclear mRNA export; component of the nuclear pore; ortholog of human TAP","termid":"PBO:0085439"}


id: GO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pollen tube over time, from its initial formation to a mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen tube development","termid":"GO:0048868"}


id: FYPO:0006346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle has two poles and can elongate during anaphase, but has decreased and non-uniform thickness along its length.","definition_xrefs":["PomBase:mah","PMID:12951601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0000120","FYPO:0001985","FYPO:0000002","FYPO:0002399"],"is_obsolete":false,"name":"bipolar mitotic spindle with decreased, irregular thickness","synonyms":[{"name":"bipolar mitotic spindle with decreased, irregular thickness during mitotic cell cycle","type":"exact"},{"name":"bipolar mitotic spindle with decreased, irregular thickness during vegetative growth","type":"exact"},{"name":"decreased, irregular bipolar mitotic spindle thickness","type":"exact"},{"name":"thin, discontinuous bipolar mitotic spindle","type":"related"}],"termid":"FYPO:0006346"}


id: PBO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1 (predicted)","termid":"PBO:0004187"}


id: PBO:0032738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export GTPase Nog2 (predicted)","termid":"PBO:0032738"}


id: PBO:0111925
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi","termid":"PBO:0111925"}


id: GO:0019497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hexachlorocyclohexane, a cyclohexane derivative with 6 chlorine atoms attached to the hexane ring. Hexachlorocyclohexane consists of a mixture of 8 different isomers and was used a commercial insecticide. It is persistent in the environment, causing serious soil pollution.","definition_xrefs":["UM-BBD_pathwayID:ghch","UM-BBD_pathwayID:hch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexachlorocyclohexane metabolic process","synonyms":[{"name":"hexachlorocyclohexane metabolism","type":"exact"}],"termid":"GO:0019497"}


id: FYPO:0005679
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deubiquitination of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal after cells have been exposed to hydroxyurea.","definition_xrefs":["PMID:27151298","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein deubiquitination following cellular response to hydroxyurea during vegetative growth","synonyms":[{"name":"decreased protein deubiquitination during cellular response to hydroxyurea","type":"related"},{"name":"decreased protein deubiquitination following cellular response to HU","type":"exact"},{"name":"decreased protein deubiquitination following cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein deubiquitylation following cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein deubiquitination following cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0005679"}


id: PBO:0070937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 45","termid":"PBO:0070937"}


id: GO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ethanol stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ethanol","secondary_identifiers":["GO:0017036"],"termid":"GO:0045471"}


id: PBO:0040445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 9A (putative)","termid":"PBO:0040445"}


id: GO:0030301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cholesterol transport","termid":"GO:0030301"}


id: FYPO:0002088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more exocytic vesicles than normal near the division septum while the cell is undergoing septum assembly.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic vesicles present in increased numbers","termid":"FYPO:0002086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"exocytic vesicles present in increased numbers at septum during septum assembly","synonyms":[{"name":"accumulation of exocytic vesicles at division septum during septum assembly","type":"related"},{"name":"additional exocytic vesicles present at division septum during septum assembly","type":"exact"},{"name":"exocytic vesicles present in greater numbers at division septum during septum assembly","type":"exact"},{"name":"exocytic vesicles present in increased numbers at division septum during mitotic telophase","type":"related"},{"name":"exocytic vesicles present in increased numbers at division septum during septum assembly during mitotic cell cycle","type":"related"},{"name":"exocytic vesicles present in increased numbers at division septum during septum assembly during vegetative growth","type":"exact"},{"name":"exocytic vesicles present in increased numbers at septum during septation","type":"broad"},{"name":"exocytotic vesicles present in increased numbers at division septum during septum assembly","type":"exact"},{"name":"extra exocytic vesicles at division septum during septum assembly","type":"exact"},{"name":"post-Golgi secretory vesicles present in increased numbers at division septum during septum assembly","type":"related"}],"termid":"FYPO:0002088"}


id: GO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + O2 = H2O + leukotriene A4.","definition_xrefs":["RHEA:32307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activity","secondary_identifiers":["EC:1.13.11.34"],"synonyms":[{"name":"5-delta-lipoxygenase activity","type":"related"},{"name":"5-lipoxygenase activity","type":"related"},{"name":"5Delta-lipoxygenase activity","type":"related"},{"name":"C-5-lipoxygenase activity","type":"related"},{"name":"LTA synthase activity","type":"narrow"},{"name":"arachidonate:oxygen 5-oxidoreductase activity","type":"related"},{"name":"arachidonic 5-lipoxygenase activity","type":"related"},{"name":"arachidonic acid 5-lipoxygenase activity","type":"related"},{"name":"delta(5)-lipoxygenase activity","type":"related"},{"name":"delta5-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"},{"name":"leukotriene-A(4) synthase activity","type":"narrow"},{"name":"leukotriene-A4 synthase activity","type":"related"}],"termid":"GO:0004051"}


id: GO:0141122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the breakage of a nitrogen-oxygen bond by means other than hydrolysis and oxidation.","definition_xrefs":["EC:4.8.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"nitrogen-oxygen hydrolyase activity","termid":"GO:0141122"}


id: FYPO:0000894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intracellular mitochondrion distribution, the process that results in the spatial arrangement of mitochondria in a cell, is abnormal.","definition_xrefs":["GO:0048312","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial distribution","termid":"FYPO:0000489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal intracellular mitochondrion distribution","synonyms":[{"name":"abnormal intracellular mitochondrion distribution during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular mitochondrion distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0000894"}


id: GO:0099628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which diffusing neurotransmitter receptor becomes trapped in region of the plasma membrane.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor diffusion trapping","termid":"GO:0098953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor diffusion trapping","termid":"GO:0099628"}


id: PBO:0052497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 9","termid":"PBO:0052497"}


id: PBO:0003425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRR-NUC nuclease associated domain, human MTMR15 homolog","termid":"PBO:0003425"}


id: PBO:0059363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A","termid":"PBO:0059363"}


id: PBO:0058722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6850","termid":"PBO:0058722"}


id: FYPO:0000326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the stable attachment of sister chromatids to microtubules emanating from opposite poles of the mitotic spindle during metaphase plate congression is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid biorientation","synonyms":[{"name":"abnormal sister chromatid biorientation during mitosis","type":"exact"},{"name":"abnormal sister chromatid biorientation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid biorientation during vegetative growth","type":"exact"}],"termid":"FYPO:0000326"}


id: PBO:0031029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_organization","termid":"PBO:0031029"}


id: MONDO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete STAG1-related intellectual disability-facial dysmorphism-gastroesophageal reflux syndrome (obsolete MONDO:0044716)","termid":"MONDO:0044716","xrefs":{"Monarch":{"xref_id":"0044716"}}}


id: PBO:0044861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAP3 binding cell death enhancer 1","termid":"PBO:0044861"}


id: SO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe increase in cds length that inserts one or more codons into the coding sequence within an existing codon.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_insertion","termid":"SO:0001821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruptive_inframe_insertion","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:disruptive_inframe_insertion","type":"exact"},{"name":"disruptive increase in CDS length","type":"exact"},{"name":"disruptive inframe insertion","type":"exact"},{"name":"snpEff:CODON_CHANGE_PLUS_CODON_INSERTION","type":"exact"}],"termid":"SO:0001824"}


id: FYPO:0006307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actin filament severing is decreased. Actin filament severing is the process in which an actin filament is broken down into smaller filaments.","definition_xrefs":["GO:0051014","PMID:22024167","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based process","termid":"FYPO:0006306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased actin filament severing","synonyms":[{"name":"decreased F-actin severing","type":"exact"},{"name":"decreased actin filament severing during mitotic cell cycle","type":"related"},{"name":"decreased actin filament severing during vegetative growth","type":"exact"},{"name":"reduced actin filament severing","type":"exact"}],"termid":"FYPO:0006307"}


id: PBO:0082293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Argininosuccinate lyase; catalyzes the final step in the arginine biosynthesis pathway","termid":"PBO:0082293"}


id: PR:Q9UUD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prp38 gene.","definition_xrefs":["UniProtKB:Q9UUD2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.08","synonyms":[{"name":"Spom972h-prp38","type":"exact"}],"termid":"PR:Q9UUD2"}


id: PBO:0011982
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poikiloderma with neutropenia","termid":"PBO:0011982"}


id: MONDO:0021979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital hypotrichosis that is characterized by trichorrhexis nodosa and trichoptilosis, dry skin, keratosis pilaris and leukonychia totalis. Other features include progressive transgrediens type of palmoplantar keratoderma, and hyperkeratotic lesions on the knees, elbows and perianal region.","definition_xrefs":["PMID:7577599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basaran Yilmaz syndrome","secondary_identifiers":["MEDGEN:419444","MESH:C537660","UMLS:C2931577"],"synonyms":[{"name":"keratoderma, hypotrichosis and leukonychia totalis","type":"related"}],"termid":"MONDO:0021979","xrefs":{"Monarch":{"xref_id":"0021979"}}}


id: GO:0002831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a response to biotic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to biotic stimulus","termid":"GO:0002831"}


id: SO:0001352
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_thio_2prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_thio_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:060"],"synonyms":[{"name":"2-thio-2'-O-methyluridine","type":"exact"},{"name":"s2Um","type":"exact"},{"name":"two thio two prime O methyluridine","type":"exact"}],"termid":"SO:0001352"}


id: MONDO:0011448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"PPARG-related familial partial lipodystrophy","secondary_identifiers":["Orphanet:79083","UMLS:C1720861","GARD:12600","OMIM:604367","DOID:0070204","MEDGEN:328393"],"synonyms":[{"name":"FPLD3","type":"exact"},{"name":"PPARG-related FPLD","type":"exact"},{"name":"familial partial lipodystrophy associated with PPARG mutations","type":"related"},{"name":"familial partial lipodystrophy type 3","type":"exact"},{"name":"insulin resistance, severe, digenic","type":"related"},{"name":"lipodystrophy, familial partial, associated with Pparg mutations","type":"related"},{"name":"lipodystrophy, familial partial, type 3","type":"related"}],"termid":"MONDO:0011448","xrefs":{"Monarch":{"xref_id":"0011448"}}}


id: PBO:0056022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte specific protein 1","termid":"PBO:0056022"}


id: GO:1904030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["GOC:als","GO_REF:0000059","PMID:22995177","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyclin-dependent protein kinase activity","synonyms":[{"name":"down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"inhibition of cyclin-dependent protein kinase activity","type":"exact"}],"termid":"GO:1904030"}


id: PBO:0080177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 12","termid":"PBO:0080177"}


id: MONDO:0005834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with the organism Mycobacterium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlamydia trachomatis infectious disease","termid":"MONDO:0005701"},{"relation_name":"is_a","term_name":"granuloma inguinale","termid":"MONDO:0005777"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphogranuloma venereum","secondary_identifiers":["ICD9:099.1","MESH:D008219","NCIT:C26822","MEDGEN:44221","UMLS:C0024286","SCTID:186946009","DOID:13819","EFO:0007353"],"synonyms":[{"name":"Durand-Nicolas-Favre disease","type":"exact"},{"name":"LGV","type":"related"},{"name":"Poradenitis inguinale","type":"exact"},{"name":"climatic or tropical bubo","type":"exact"},{"name":"lymph granuloma inguinale","type":"exact"},{"name":"lymphogranuloma inguinale","type":"exact"},{"name":"strumous bubo","type":"exact"}],"termid":"MONDO:0005834","xrefs":{"Monarch":{"xref_id":"0005834"}}}


id: MONDO:1012110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000519-9685"],"termid":"MONDO:1012110","xrefs":{"Monarch":{"xref_id":"1012110"}}}


id: MONDO:0012283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","secondary_identifiers":["OMIM:609466","MESH:C536427","UMLS:C1836120","MEDGEN:324442"],"synonyms":[{"name":"cleft palate, midfacial hypoplasia, triangular facies, and sensorineural hearing loss","type":"exact"}],"termid":"MONDO:0012283","xrefs":{"Monarch":{"xref_id":"0012283"}}}


id: PBO:0061139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME2 pseudogene 3","termid":"PBO:0061139"}


id: GO:0090700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a plant organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb","PMID:9090883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"part_of","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of plant organ identity","termid":"GO:0090700"}


id: PBO:0059684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 50","termid":"PBO:0059684"}


id: PBO:0031388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_phenylalanine","termid":"PBO:0031388"}


id: MONDO:0006848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The lack of sufficient energy or protein to meet the body's metabolic demands, as a result of either an inadequate dietary intake of protein, intake of poor quality dietary protein, increased demands due to disease, or increased nutrient losses.","definition_xrefs":["EFO:1001033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-energy malnutrition","termid":"MONDO:0001371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marasmus","secondary_identifiers":["MEDGEN:39251","ICD10CM:E41","DOID:12328","ICD9:261","SCTID:29740003","MedDRA:10026820","UMLS:C0086588"],"synonyms":[{"name":"nutritional atrophy","type":"exact"},{"name":"nutritional marasmus","type":"exact"}],"termid":"MONDO:0006848","xrefs":{"Monarch":{"xref_id":"0006848"}}}


id: GO:0033403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"UUA codon-amino acid adaptor activity","synonyms":[{"name":"TTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033403"}


id: PBO:0071410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 16","termid":"PBO:0071410"}


id: GO:1903225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endodermal cell differentiation.","definition_xrefs":["PMID:23154389","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"negatively_regulates","term_name":"endodermal cell differentiation","termid":"GO:0035987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endodermal cell differentiation","synonyms":[{"name":"down regulation of endoderm cell differentiation","type":"exact"},{"name":"down regulation of endodermal cell differentiation","type":"exact"},{"name":"down-regulation of endoderm cell differentiation","type":"exact"},{"name":"down-regulation of endodermal cell differentiation","type":"exact"},{"name":"downregulation of endoderm cell differentiation","type":"exact"},{"name":"downregulation of endodermal cell differentiation","type":"exact"},{"name":"inhibition of endoderm cell differentiation","type":"narrow"},{"name":"inhibition of endodermal cell differentiation","type":"narrow"},{"name":"negative regulation of endoderm cell differentiation","type":"exact"}],"termid":"GO:1903225"}


id: MOD:00727
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a mannose group through a glycosidic bond,","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"mannosylated","synonyms":[{"name":"Man","type":"exact"}],"termid":"MOD:00727"}


id: PBO:0046577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 19, envelope","termid":"PBO:0046577"}


id: MONDO:1012400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dilute coat color with neurological defects, non-human animal","termid":"MONDO:1011883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilute coat color with neurological defects, dog","secondary_identifiers":["OMIA:001501-9615"],"termid":"MONDO:1012400","xrefs":{"Monarch":{"xref_id":"1012400"}}}


id: PBO:0056691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-stranded break formation protein 1","termid":"PBO:0056691"}


id: GO:0021890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a neuroblast becomes restricted such that it will develop into an interneuron residing in the olfactory bulb.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate commitment","termid":"GO:0048663"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron differentiation","termid":"GO:0021889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb interneuron fate commitment","termid":"GO:0021890"}


id: PBO:0061391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 51","termid":"PBO:0061391"}


id: MONDO:0018989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent acute pancreatitis (RAP) is characterized by repeated attacks of acute pancreatitis (AP), which is defined as an acute inflammatory process of the pancreas with variable involvement of other regional tissues or remote organ systems.","definition_xrefs":["Orphanet:64740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"recurrent acute pancreatitis","secondary_identifiers":["MEDGEN:489943","MedDRA:10033657","NCIT:C184324","UMLS:C0267937","SCTID:197458008","icd11.foundation:300900170"],"termid":"MONDO:0018989","xrefs":{"Monarch":{"xref_id":"0018989"}}}


id: MONDO:0008539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete distal arthrogryposis type 10 (obsolete MONDO:0008539)","termid":"MONDO:0008539","xrefs":{"Monarch":{"xref_id":"0008539"}}}


id: PR:O74972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4B4.11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein fyv4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.11","synonyms":[{"name":"Spom972h-SPBC4B4.11","type":"exact"}],"termid":"PR:O74972"}


id: PBO:0017964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate reductase Mtd1 (predicted)","termid":"PBO:0017964"}


id: GO:0140706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein-containing complex localization by which the complex is transported to, or maintained in, the centriolar satellite.","definition_xrefs":["PMID:27979967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein-containing complex localization to centriolar satellite","termid":"GO:0140706"}


id: MONDO:0008443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-precocious puberty syndrome is characterized by precocious puberty (due to Leydig cell hyperplasia), progressive spastic paraplegia and intellectual deficit. It has been described in two brothers. The fact that other family members displayed brisk reflexes and dysarthria suggested autosomal dominant inheritance with variable expression.","definition_xrefs":["Orphanet:2826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spastic paraplegia-precocious puberty syndrome","secondary_identifiers":["GARD:4918","OMIM:182820","MESH:C536874","MEDGEN:401096","UMLS:C1866850"],"synonyms":[{"name":"familial spastic paraplegia, intellectual disability, and precocious puberty","type":"related"},{"name":"familial spastic paraplegia, mental retardation, and precocious puberty","type":"related"},{"name":"precocious puberty with spastic paraplegia","type":"related"},{"name":"spastic paraplegia with precocious puberty","type":"related"}],"termid":"MONDO:0008443","xrefs":{"Monarch":{"xref_id":"0008443"}}}


id: GO:2001061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a D-glycero-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"D-glycero-D-manno-heptose 7-phosphate metabolic process","termid":"GO:2001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-glycero-D-manno-heptose 7-phosphate biosynthetic process","secondary_identifiers":["UniPathway:UPA00041"],"synonyms":[{"name":"D-glycero-D-manno-heptose 7-phosphate biosynthesis","type":"exact"}],"termid":"GO:2001061"}


id: PBO:0004800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease (predicted)","termid":"PBO:0004800"}


id: PBO:0071538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 3","termid":"PBO:0071538"}


id: GO:0090500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"}


id: MONDO:1012531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digital dermatitis, non-human animal","termid":"MONDO:1011774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digital dermatitis, cattle","secondary_identifiers":["OMIA:002224-9913"],"termid":"MONDO:1012531","xrefs":{"Monarch":{"xref_id":"1012531"}}}


id: PBO:0038510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 5","termid":"PBO:0038510"}


id: PBO:0064905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 regulatory subunit B, alpha","termid":"PBO:0064905"}


id: GO:1903241
data:
  {"annotated_genes":["SJAG_00498","SJAG_00313","SJAG_02558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107082,112756,114155],"is_not":false,"summary":null,"term":"GO:1903241"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an U2-type prespliceosome.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:12374752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex assembly","termid":"GO:0000245"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00313":null,"SJAG_00498":null,"SJAG_02558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"U2-type prespliceosome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG prespliceosome assembly","type":"narrow"},{"name":"GT-AG prespliceosome formation","type":"narrow"},{"name":"U2-type prespliceosome formation","type":"exact"},{"name":"major prespliceosome assembly","type":"exact"},{"name":"major prespliceosome formation","type":"exact"},{"name":"mammalian U2-type spliceosomal complex A assembly","type":"narrow"},{"name":"mammalian U2-type spliceosomal complex A formation","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B assembly","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B formation","type":"narrow"}],"termid":"GO:1903241","terms_by_termid":{"GO:1903241":null}}


id: PBO:0085059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi","termid":"PBO:0085059"}


id: GO:1901575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance catabolic process (obsolete GO:1901575)","synonyms":[{"name":"organic molecular entity catabolic process","type":"exact"},{"name":"organic substance breakdown","type":"exact"},{"name":"organic substance catabolism","type":"exact"},{"name":"organic substance degradation","type":"exact"}],"termid":"GO:1901575"}


id: _global:promoter_of
data:
  {"annotation_feature_type":"gene","cv_name":"SO_feature_relations","definition":"Relation between a promoter and a gene.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_of","termid":"_global:promoter_of"}


id: GO:0032721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphotoxin A production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphotoxin A production","termid":"GO:0032681"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"negatively_regulates","term_name":"lymphotoxin A production","termid":"GO:0032641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of lymphotoxin A production","secondary_identifiers":["GO:0043018"],"synonyms":[{"name":"down regulation of lymphotoxin A production","type":"exact"},{"name":"down-regulation of lymphotoxin A production","type":"exact"},{"name":"downregulation of lymphotoxin A production","type":"exact"},{"name":"inhibition of lymphotoxin A production","type":"narrow"},{"name":"negative regulation of LTA production","type":"exact"},{"name":"negative regulation of TNF-beta production","type":"exact"},{"name":"negative regulation of lymphotoxin A biosynthetic process","type":"narrow"},{"name":"negative regulation of lymphotoxin-alpha production","type":"exact"},{"name":"negative regulation of tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032721"}


id: FYPO:0003709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype in which cells adhere to other cells of compatible mating type less strongly or to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased agglutination","synonyms":[{"name":"decreased agglutination involved in conjugation with cellular fusion","type":"exact"},{"name":"reduced agglutination","type":"exact"}],"termid":"FYPO:0003709"}


id: GO:0035811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the amount of urine excreted from the body over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urine volume","termid":"GO:0035809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urine volume","synonyms":[{"name":"antidiuresis","type":"broad"},{"name":"decrease in urine flow","type":"exact"},{"name":"reduction of urinary volume","type":"exact"}],"termid":"GO:0035811"}


id: PBO:0068884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 125, pseudogene","termid":"PBO:0068884"}


id: PBO:0109611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma stem cell association long noncoding RNA","termid":"PBO:0109611"}


id: PBO:0038335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-activity_directly_regulates_activity_of","termid":"PBO:0038335"}


id: MONDO:0044745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic injuries to the brain, cranial nerves, spinal cord, autonomic nervous system, or neuromuscular system, including iatrogenic injuries induced by surgical procedures.","definition_xrefs":["MESH:D020196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nervous system injury","secondary_identifiers":["SCTID:128239009","EFO:0009490"],"synonyms":[{"name":"Injuries, craniocervical","type":"related"},{"name":"Injuries, nervous system","type":"related"},{"name":"craniocervical Injuries","type":"related"},{"name":"craniocervical injury","type":"related"},{"name":"injury of nervous system","type":"exact"},{"name":"injury, craniocervical","type":"related"},{"name":"injury, nervous system","type":"related"},{"name":"nervous system Injuries","type":"related"},{"name":"nervous system Traumas","type":"related"},{"name":"nervous system injury","type":"exact"},{"name":"nervous system trauma","type":"related"}],"termid":"MONDO:0044745","xrefs":{"Monarch":{"xref_id":"0044745"}}}


id: GO:2001246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylcholine metabolic process","termid":"GO:0150174"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine biosynthetic process","termid":"GO:2001245"},{"relation_name":"negatively_regulates","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylcholine biosynthetic process","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis","type":"exact"}],"termid":"GO:2001246"}


id: PBO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt subfamily","termid":"PBO:0001421"}


id: MONDO:0015085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bathing suit ichthyosis (BSI) is a rare variant of autosomal recessive congenital ichthyosis (ARCI) characterized by the presence of large dark scales in specific areas of the body.","definition_xrefs":["Orphanet:100976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bathing suit ichthyosis","secondary_identifiers":["SCTID:725588002","GARD:16938","icd11.foundation:174005370","MEDGEN:1386460","UMLS:C4511230"],"synonyms":[{"name":"BSI","type":"exact"}],"termid":"MONDO:0015085","xrefs":{"Monarch":{"xref_id":"0015085"}}}


id: GO:0016852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sirohydrochlorin + Co2+ = cobalt-sirohydrochlorin + 2 H+.","definition_xrefs":["RHEA:15893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"sirohydrochlorin cobaltochelatase activity","secondary_identifiers":["EC:4.99.1.3","MetaCyc:4.99.1.3-RXN"],"synonyms":[{"name":"anaerobic cobalt chelatase activity","type":"exact"},{"name":"cobalt-sirohydrochlorin cobalt-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"cobaltochelatase","type":"exact"},{"name":"sirohydrochlorin cobalt-lyase activity","type":"related"}],"termid":"GO:0016852"}


id: GO:0004322
data:
  {"annotated_genes":["SJAG_03862","SJAG_04677"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71830,78024],"is_not":false,"summary":null,"term":"GO:0004322"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 Fe2+ + 4 H+ + O2 = 4 Fe3+ + 2 H2O.","definition_xrefs":["RHEA:11148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, oxygen as acceptor","termid":"GO:0016724"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03862":null,"SJAG_04677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ferroxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-917933","MetaCyc:RXN0-1483","EC:1.16.3.1","Reactome:R-HSA-5621402","Reactome:R-HSA-1562603","Reactome:R-HSA-1562604","Reactome:R-HSA-1562626","Reactome:R-HSA-5691107","Reactome:R-HSA-917891"],"synonyms":[{"name":"Fe(II):oxygen oxidoreductase activity","type":"related"},{"name":"HEPH","type":"narrow"},{"name":"caeruloplasmin","type":"narrow"},{"name":"ceruloplasmin","type":"narrow"},{"name":"ferro:O2 oxidoreductase activity","type":"related"},{"name":"ferroxidase I","type":"related"},{"name":"ferroxidase, iron II:oxygen oxidoreductase activity","type":"related"},{"name":"hephaestin","type":"narrow"},{"name":"iron(II): oxygen oxidoreductase activity","type":"related"},{"name":"multicopper ferroxidase iron transport mediator activity","type":"narrow"}],"termid":"GO:0004322","terms_by_termid":{"GO:0004322":null}}


id: MONDO:0006607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the sebaceous gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland disorder","secondary_identifiers":["MEDGEN:48599","MESH:D012625","SCTID:3441005","ICD9:706.1","EFO:1000763","DOID:9098","UMLS:C0036502"],"synonyms":[{"name":"disease of sebaceous gland","type":"exact"},{"name":"disease of sebaceous glands","type":"related"},{"name":"disease or disorder of sebaceous gland","type":"exact"},{"name":"disorder of sebaceous gland","type":"exact"},{"name":"sebaceous gland disease","type":"exact"},{"name":"sebaceous gland disease or disorder","type":"exact"}],"termid":"MONDO:0006607","xrefs":{"Monarch":{"xref_id":"0006607"}}}


id: MONDO:0007497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear antitragus, tag at base of","secondary_identifiers":["MEDGEN:343680","OMIM:128290","UMLS:C1851905"],"synonyms":[{"name":"ear antitragus, tag at base of","type":"exact"}],"termid":"MONDO:0007497","xrefs":{"Monarch":{"xref_id":"0007497"}}}


id: PBO:0072873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB2 antisense RNA 1","termid":"PBO:0072873"}


id: GO:0008960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + membrane-derived-oligosaccharide D-glucose = 1,2-diacyl-sn-glycerol + membrane-derived-oligosaccharide 6-(glycerophospho)-D-glucose.","definition_xrefs":["EC:2.7.8.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol-membrane-oligosaccharide glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:PGLYCEROLTRANSI-RXN"],"synonyms":[{"name":"oligosaccharide glycerophosphotransferase activity","type":"related"},{"name":"phosphatidylglycerol:membrane-derived-oligosaccharide-D-glucose glycerophosphotransferase activity","type":"related"},{"name":"phosphoglycerol transferase I","type":"related"},{"name":"phosphoglycerol transferase activity","type":"related"}],"termid":"GO:0008960"}


id: GO:0034713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type I transforming growth factor beta receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor binding","termid":"GO:0005160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type I transforming growth factor beta receptor binding","secondary_identifiers":["GO:0005116","GO:0005103","GO:0005120"],"synonyms":[{"name":"TGF-beta type I binding","type":"exact"},{"name":"babo binding","type":"narrow"},{"name":"babo ligand","type":"narrow"},{"name":"baboon binding","type":"narrow"},{"name":"baboon ligand","type":"narrow"},{"name":"baboon receptor ligand","type":"narrow"},{"name":"sax binding","type":"narrow"},{"name":"sax ligand","type":"narrow"},{"name":"saxophone binding","type":"narrow"},{"name":"saxophone ligand","type":"narrow"},{"name":"thickveins binding","type":"narrow"},{"name":"thickveins ligand","type":"narrow"},{"name":"tkv binding","type":"narrow"},{"name":"tkv ligand","type":"narrow"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"related"},{"name":"transforming growth factor beta receptor type I binding","type":"exact"},{"name":"type I TGF-beta binding","type":"exact"}],"termid":"GO:0034713"}


id: PBO:0110570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase, Jmjc domain Epe1","termid":"PBO:0110570"}


id: FYPO:0000272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell fails to form a septum.","definition_xrefs":["PMID:9649519","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abolished cytokinesis","termid":"FYPO:0000417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0001320"],"is_obsolete":false,"name":"abolished septum assembly","synonyms":[{"name":"abolished division septum assembly","type":"exact"},{"name":"abolished septation","type":"broad"},{"name":"abolished septum assembly during mitotic cell cycle","type":"related"},{"name":"abolished septum formation","type":"exact"},{"name":"septum assembly abolished","type":"exact"},{"name":"septum assembly abolished during vegetative growth","type":"exact"},{"name":"septum formation: absent","type":"related"},{"name":"septum initiation defective","type":"related"}],"termid":"FYPO:0000272"}


id: PBO:0080141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasorin","termid":"PBO:0080141"}


id: PBO:0047167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM193B divergent transcript","termid":"PBO:0047167"}


id: GO:0072390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenol, a compound that consists of a benzene ring with one attached hydroxyl group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol metabolic process","termid":"GO:0072390"}


id: GO:0016072
data:
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id: PBO:0079683
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id: PBO:0059658
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id: PBO:0030601
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id: GO:0090535
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id: MONDO:0003346
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id: PBO:0073497
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id: MONDO:0011181
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id: MOD:01972
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id: PBO:0051733
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id: GO:1901121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tobramycin.","definition_xrefs":["UniPathway:UPA00971","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"tobramycin metabolic process","termid":"GO:1901119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tobramycin biosynthetic process","synonyms":[{"name":"tobramycin anabolism","type":"exact"},{"name":"tobramycin biosynthesis","type":"exact"},{"name":"tobramycin formation","type":"exact"},{"name":"tobramycin synthesis","type":"exact"}],"termid":"GO:1901121"}


id: GO:0021642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the trochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"trochlear nerve morphogenesis","termid":"GO:0021639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve formation","synonyms":[{"name":"CN IV biosynthesis","type":"related"},{"name":"CN IV formation","type":"related"}],"termid":"GO:0021642"}


id: GO:0120233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to prenyl-FMNH2, a flavin mononucleotide obtained by prenylation of the N-10 position of FMNH2 followed by cyclisation. An essential cofactor for the decarboxylase enzymes UbiD and Fdc1.","definition_xrefs":["PMID:25647642","PMID:26083743","GOC:krc","PMID:26083754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleotide binding","termid":"GO:0032553"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"prenyl-FMNH2 binding","synonyms":[{"name":"prenylated FMNH2 binding","type":"exact"}],"termid":"GO:0120233"}


id: PBO:0059597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 9","termid":"PBO:0059597"}


id: PATO:0002211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved backward or inward.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/recurved"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurved","termid":"PATO:0002211"}


id: MONDO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with true tapeworms of the helminth subclass Cestoda.","definition_xrefs":["MESH:D002590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cestode infectious disease","secondary_identifiers":["ICD9:123.8","ICD9:123.9","SCTID:86133004"],"synonyms":[{"name":"Bertielliases","type":"related"},{"name":"Bertielliasis","type":"related"},{"name":"Cenuriases","type":"related"},{"name":"Cenuriasis","type":"related"},{"name":"Cestoda caused disease or disorder","type":"exact"},{"name":"Cestoda disease or disorder","type":"exact"},{"name":"Cestoda infectious disease","type":"exact"},{"name":"Cestodiasis","type":"related"},{"name":"Cestodosis","type":"related"},{"name":"Coenuriases","type":"related"},{"name":"Coenuriasis","type":"related"},{"name":"Dipylidiases","type":"related"},{"name":"Dipylidiasis","type":"related"},{"name":"Raillietiniases","type":"related"},{"name":"Raillietiniasis","type":"related"},{"name":"cestode infection","type":"exact"},{"name":"cestode infestation","type":"related"},{"name":"disease due to Cestoda","type":"related"},{"name":"infection, cestode","type":"related"},{"name":"infection, tapeworm","type":"related"},{"name":"infections, cestode","type":"related"},{"name":"infections, tapeworm","type":"related"},{"name":"tapeworm infection","type":"related"},{"name":"tapeworm infections","type":"related"}],"termid":"MONDO:0042488","xrefs":{"Monarch":{"xref_id":"0042488"}}}


id: PBO:0071242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 83","termid":"PBO:0071242"}


id: GO:0070008
data:
  {"annotated_genes":["SJAG_01868","SJAG_00975","SJAG_04928","SJAG_04819"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76589,79827,75884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[74384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type peptidase activity","termid":"GO:0008236"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00975":null,"SJAG_01868":null,"SJAG_04819":null,"SJAG_04928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0008233","GO:0003674"],"is_obsolete":false,"name":"serine-type exopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070008","terms_by_termid":{"GO:0004185":null,"GO:0008240":null}}


id: MONDO:0013296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hematologic neoplasms characterized by the rearrangement of the FGFR1 gene, resulting in translocations with an 8p11 breakpoint. Patients present with a myeloproliferative neoplasm, acute myeloid leukemia, lymphoblastic lymphoma/leukemia of T or B-cell lineage, or acute leukemia of mixed phenotype.","definition_xrefs":["NCIT:C84277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid/lymphoid neoplasms associated with eosinophilia and abnormality of PDGFRA, PDGFRB, FGFR1 or JAK2","termid":"MONDO:0015688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myeloid neoplasm associated with FGFR1 rearrangement","secondary_identifiers":["GARD:17043","DOID:0080167","icd11.foundation:2019647878","OMIM:613523","ICDO:9967/3","ONCOTREE:MLNFGFR1","MEDGEN:462123","UMLS:C3150773","Orphanet:168953"],"synonyms":[{"name":"8p11 myeloproliferative syndrome","type":"exact"},{"name":"8p11 stem cell leukemia/lymphoma syndrome","type":"exact"},{"name":"8p11 stem cell syndrome","type":"exact"},{"name":"chromosome 8p11 myeloproliferative syndrome","type":"exact"},{"name":"myeloid and lymphoid neoplasms associated with FGFR1 abnormalities","type":"exact"},{"name":"myeloid and lymphoid neoplasms with FGFR1 rearrangement","type":"exact"},{"name":"myeloid/lymphoid neoplasm associated with FGFR1 rearrangement","type":"exact"},{"name":"myeloid/lymphoid neoplasms with FGFR1 rearrangement","type":"exact"},{"name":"stem cell leukemia/lymphoma","type":"exact"}],"termid":"MONDO:0013296","xrefs":{"Monarch":{"xref_id":"0013296"}}}


id: PBO:0076146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate receptor 1","termid":"PBO:0076146"}


id: PBO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_localization","termid":"PBO:0031830"}


id: MONDO:0005742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholecystitis resulting from infection by gas producing organisms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"},{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"emphysematous cholecystitis","secondary_identifiers":["NCIT:C35592","MEDGEN:101072","MESH:D041882","UMLS:C0521610","DOID:9765","SCTID:95558008"],"synonyms":[{"name":"gaseous pericholecystitis","type":"exact"}],"termid":"MONDO:0005742","xrefs":{"Monarch":{"xref_id":"0005742"}}}


id: MONDO:1012552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retained placenta, non-human animal","termid":"MONDO:1011922"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retained placenta, horse","secondary_identifiers":["OMIA:002475-9796"],"termid":"MONDO:1012552","xrefs":{"Monarch":{"xref_id":"1012552"}}}


id: GO:0071228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor cell","termid":"GO:0071228"}


id: PBO:0054865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2279","termid":"PBO:0054865"}


id: PATO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a saddle.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saddle-shaped","termid":"PATO:0002517"}


id: MONDO:0019533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal cold hemoglobinuria (PCH) is a very rare subtype of autoimmune hemolytic anemia (AIHA), caused by the presence of cold-reacting autoantibodies in the blood and characterized by the sudden presence of hemoglobinuria, typically after exposure to cold temperatures.","definition_xrefs":["Orphanet:90035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, cold type","termid":"MONDO:0016450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"paroxysmal cold hemoglobinuria","secondary_identifiers":["UMLS:C0086774","MEDGEN:39693","GARD:7335","SCTID:127057004","NANDO:2200619","NANDO:1200308","NORD:1556","icd11.foundation:715111132"],"synonyms":[{"name":"Donath-Landsteiner hemolytic anaemia","type":"exact"},{"name":"Donath-Landsteiner hemolytic anemia","type":"exact"},{"name":"Donath-Landsteiner syndrome","type":"exact"},{"name":"PCH","type":"exact"},{"name":"hemoglobinuria paroxysmal cold","type":"related"}],"termid":"MONDO:0019533","xrefs":{"Monarch":{"xref_id":"0019533"}}}


id: GO:0010999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a result of heme levels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of eIF2 alpha phosphorylation by heme","secondary_identifiers":["Reactome:R-HSA-9648895"],"termid":"GO:0010999"}


id: PBO:0074588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 4","termid":"PBO:0074588"}


id: PBO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.50","termid":"PBO:0002442"}


id: GO:0021520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a motor neuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"part_of","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal cord motor neuron cell fate specification","termid":"GO:0021520"}


id: PBO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 1","termid":"PBO:0061948"}


id: MONDO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete breast duct papilloma (obsolete MONDO:0002059)","termid":"MONDO:0002059","xrefs":{"Monarch":{"xref_id":"0002059"}}}


id: PBO:0066977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 280","termid":"PBO:0066977"}


id: PATO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic","termid":"PATO:0001356"}


id: GO:0140353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid from a cell, into the extracellular region.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid export from cell","synonyms":[{"name":"lipid efflux","type":"broad"}],"termid":"GO:0140353"}


id: GO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate catabolic process","termid":"GO:0009184"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dADP catabolic process","synonyms":[{"name":"dADP breakdown","type":"exact"},{"name":"dADP catabolism","type":"exact"},{"name":"dADP degradation","type":"exact"}],"termid":"GO:0046057"}


id: MONDO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degeneration of macula and posterior pole","termid":"MONDO:0002175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hole retinal cyst","secondary_identifiers":["ICD9:362.54","UMLS:C1261331","DOID:13214","MEDGEN:687835","SCTID:1079004"],"synonyms":[{"name":"macular cyst or hole","type":"exact"},{"name":"macular cyst, hole, or pseudohole of retina","type":"exact"},{"name":"macular pseudohole retinal cyst","type":"exact"}],"termid":"MONDO:0001663","xrefs":{"Monarch":{"xref_id":"0001663"}}}


id: PBO:0086725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene","termid":"PBO:0086725"}


id: GO:0086095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A G protein-coupled acetylcholine receptor signaling pathway that contributes to a decrease in frequency or rate of heart contraction through activation of the IKACh potassium channel. Binding of acetylcholine to a G protein-coupled acetylcholine receptor (muscarinic receptor) on the surface of the signal-receiving cell results in liberation of the G-beta/gamma complex from the alpha subunit. The G-beta/gamma complex binds directly to the inward-rectifying potassium channel IKACh. Once the ion channel is activated, potassium ions (K+) flow out of the cell and cause it to hyperpolarize. In its hyperpolarized state, action potentials cannot be fired as quickly as possible, which slows the heart rate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","Wikipedia:G_protein-gated_ion_channel"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of IKACh channel activity by G protein-coupled acetylcholine receptor signaling pathway involved in negative regulation of heart rate (obsolete GO:0086095)","synonyms":[{"name":"Gbeta/gamma-coupled muscarinic receptor signaling pathway involved in negative regulation of heart rate","type":"related"},{"name":"cardiac muscarinic receptor signaling via Gbeta/gamma","type":"related"},{"name":"muscarinic receptor signaling pathway involved in activation of IKACH","type":"exact"},{"name":"muscarinic receptor signaling pathway involved in ion channel activation","type":"broad"},{"name":"positive regulation of IKACh channel activity by G-protein coupled acetylcholine receptor signaling","type":"exact"}],"termid":"GO:0086095"}


id: PBO:0030895
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_phenotype_during_vegetative_growth","termid":"PBO:0030895"}


id: GO:0021614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0838580343","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve maturation","synonyms":[{"name":"CN IX maturation","type":"related"}],"termid":"GO:0021614"}


id: PR:O14359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC30D10.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AIM2 family protein C30D10.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.14","synonyms":[{"name":"Spom972h-SPBC30D10.14","type":"exact"}],"termid":"PR:O14359"}


id: GO:1990440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["PMID:21113145","GOC:PARL","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990440)","synonyms":[{"name":"ER stress-induced upregulation of transcription","type":"broad"},{"name":"activation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of transcription induced by ER stress","type":"broad"},{"name":"upregulation of Pol II transcription induced by ER stress","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1990440"}


id: GO:1904534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomeric loop disassembly.","definition_xrefs":["GOC:nc","GOC:BHF","GO_REF:0000058","GOC:TermGenie","PMID:22579284","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"regulation of telomeric loop disassembly","termid":"GO:1904533"},{"relation_name":"negatively_regulates","term_name":"telomeric loop disassembly","termid":"GO:0090657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0032200"],"is_obsolete":false,"name":"negative regulation of telomeric loop disassembly","synonyms":[{"name":"down regulation of T loop disassembly","type":"exact"},{"name":"down regulation of telomeric loop disassembly","type":"exact"},{"name":"down-regulation of T loop disassembly","type":"exact"},{"name":"down-regulation of telomeric loop disassembly","type":"exact"},{"name":"downregulation of T loop disassembly","type":"exact"},{"name":"downregulation of telomeric loop disassembly","type":"exact"},{"name":"inhibition of T loop disassembly","type":"narrow"},{"name":"inhibition of telomeric loop disassembly","type":"narrow"},{"name":"negative regulation of T loop disassembly","type":"exact"}],"termid":"GO:1904534"}


id: GO:0050887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of the type or quality of a sensation. Sensory modalities include touch, thermal sensation, visual sensation, auditory sensation and pain.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of sensory modality","termid":"GO:0050887"}


id: PBO:0040136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 2","termid":"PBO:0040136"}


id: PBO:0039910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF9 intronic transcript 1","termid":"PBO:0039910"}


id: PBO:0070416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 2","termid":"PBO:0070416"}


id: PR:O74978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1827.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C1827.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.05c","synonyms":[{"name":"Spom972h-SPCC1827.05c","type":"exact"}],"termid":"PR:O74978"}


id: PBO:0049154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1B","termid":"PBO:0049154"}


id: PBO:0065663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type M","termid":"PBO:0065663"}


id: PBO:0082031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, minor isoform; controls proteome at post-transcriptional level, binds proteins and DNA, involved in regulation of many processes including exocytosis, vesicle transport, Ras/MAPK signaling, and rapamycin-sensitive signaling; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; abundance relative to Bmh1p increases during sporulation","termid":"PBO:0082031"}


id: FYPO:0002351
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule disassembly is abnormal.","definition_xrefs":["PomBase:mah","PMID:21098141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal stress granule disassembly","synonyms":[{"name":"abnormal cytoplasmic stress granule disassembly","type":"exact"},{"name":"abnormal stress granule disassembly during mitotic cell cycle","type":"related"},{"name":"abnormal stress granule disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002351"}


id: MONDO:0011288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, optic atrophy, microcephaly, and 10Y sex reversal","secondary_identifiers":["MESH:C566409","OMIM:603117","MEDGEN:351065","UMLS:C1864185"],"synonyms":[{"name":"spastic paraplegia, optic atrophy, microcephaly, and XY SEX reversal","type":"related"}],"termid":"MONDO:0011288","xrefs":{"Monarch":{"xref_id":"0011288"}}}


id: GO:1901300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"activation of hydrogen peroxide-mediated programmed cell death","type":"narrow"},{"name":"up regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"up-regulation of hydrogen peroxide-mediated programmed cell death","type":"exact"},{"name":"upregulation of hydrogen peroxide-mediated programmed cell death","type":"exact"}],"termid":"GO:1901300"}


id: MONDO:0012577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 4","secondary_identifiers":["OMIM:610906","MEDGEN:370920","UMLS:C1970474"],"synonyms":[{"name":"ASRT4","type":"related"},{"name":"asthma and allergic rhinitis, susceptibility to","type":"related"},{"name":"asthma-related traits, susceptibility to, 4","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 4","type":"exact"}],"termid":"MONDO:0012577","xrefs":{"Monarch":{"xref_id":"0012577"}}}


id: GO:0017125
data:
  {"annotated_genes":["SJAG_03906"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70785],"is_not":false,"summary":null,"term":"GO:0017125"}]},"cv_name":"molecular_function","definition":"Catalysis of the insertion of a dCMP residue opposite a template abasic site in DNA.","definition_xrefs":["PMID:10535901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"deoxycytidyl transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0019986","Reactome:R-HSA-110308"],"synonyms":[{"name":"deoxycytidyl transferase activity, template-dependent","type":"narrow"}],"termid":"GO:0017125","terms_by_termid":{"GO:0017125":null}}


id: PBO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2A","termid":"PBO:0044866"}


id: PBO:0089010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion protein Ugo1","termid":"PBO:0089010"}


id: PBO:0030640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_following_anaerobic_growth","termid":"PBO:0030640"}


id: PBO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf11","termid":"PBO:0000931"}


id: FYECO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using hydroxyurea and subsequently released from the block.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HU block and release","termid":"FYECO:0000260"}


id: PBO:0040372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d","termid":"PBO:0040372"}


id: GO:1905049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GO_REF:0000059","PMID:26473732","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metallopeptidase activity","synonyms":[{"name":"down regulation of metallopeptidase activity","type":"exact"},{"name":"down regulation of metalloprotease activity","type":"narrow"},{"name":"down regulation of metalloproteinase activity","type":"narrow"},{"name":"down-regulation of metallopeptidase activity","type":"exact"},{"name":"down-regulation of metalloprotease activity","type":"narrow"},{"name":"down-regulation of metalloproteinase activity","type":"narrow"},{"name":"downregulation of metallopeptidase activity","type":"exact"},{"name":"downregulation of metalloprotease activity","type":"narrow"},{"name":"downregulation of metalloproteinase activity","type":"narrow"},{"name":"inhibition of metallopeptidase activity","type":"narrow"},{"name":"inhibition of metalloprotease activity","type":"narrow"},{"name":"inhibition of metalloproteinase activity","type":"narrow"},{"name":"negative regulation of metalloprotease activity","type":"narrow"},{"name":"negative regulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905049"}


id: PBO:0082402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase; which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; F1 translationally regulates ATP6 and ATP8 expression to achieve a balanced output of ATP synthase genes encoded in nucleus and mitochondria; phosphorylated","termid":"PBO:0082402"}


id: PBO:0047562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF14 antisense RNA 1","termid":"PBO:0047562"}


id: PBO:0052269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4C","termid":"PBO:0052269"}


id: PBO:0039931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF35 antisense RNA 1","termid":"PBO:0039931"}


id: MONDO:0010282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mycobacterium tuberculosis, susceptibility","termid":"MONDO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycobacterium tuberculosis, susceptibility to, X-linked","secondary_identifiers":["MEDGEN:357096","OMIM:300259","UMLS:C1866629"],"synonyms":[{"name":"MTBSX","type":"related"},{"name":"Mycobacterium tuberculosis, susceptibility, X-linked","type":"exact"}],"termid":"MONDO:0010282","xrefs":{"Monarch":{"xref_id":"0010282"}}}


id: GO:0050087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome c] + D-mannitol = 2 [Fe(II)cytochrome c] + D-fructose + 2 H+.","definition_xrefs":["RHEA:17597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"mannitol dehydrogenase (cytochrome) activity","secondary_identifiers":["MetaCyc:MANNITOL-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.1.2.2"],"synonyms":[{"name":"D-mannitol:ferricytochrome-c 2-oxidoreductase activity","type":"related"},{"name":"polyol dehydrogenase activity","type":"broad"}],"termid":"GO:0050087"}


id: MONDO:0958353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of congenital muscular dystrophy characterized by congenital weakness, hypotonia, proximal joint contractures, marked hyperlaxity of the distal joints, attainment of independent ambulation which is subsequently lost and uniform respiratory insufficiency during the teenage years.","definition_xrefs":["Orphanet:646113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen 6-related congenital muscular dystrophy","termid":"MONDO:0958077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"intermediate collagen VI-related muscular dystrophy","secondary_identifiers":["MEDGEN:1853152","UMLS:C5816698"],"termid":"MONDO:0958353","xrefs":{"Monarch":{"xref_id":"0958353"}}}


id: GO:0019751
data:
  {"annotated_genes":["SJAG_02305","SJAG_03098","SJAG_03275","SJAG_00237","SJAG_02706","SJAG_04320","SJAG_04192","SJAG_03609","SJAG_01970","SJAG_01012","SJAG_04870","SJAG_04048","SJAG_00880","SJAG_01154","SJAG_00321","SJAG_00409","SJAG_00244","SJAG_04067","SJAG_04178","SJAG_02429","SJAG_01057","SJAG_02321","SJAG_01148","SJAG_01702","SJAG_03409","SJAG_03739"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[79557,105517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071543"},{"annotations":[106819,94317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[72454,78988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[65778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006071"},{"annotations":[88947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[66163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006021"},{"annotations":[71589,93726,115346,75937,75146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032958"},{"annotations":[89054,115347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071545"},{"annotations":[68326,107227,107228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043647"},{"annotations":[73020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[77212,74052,110023,106311,79244,97234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046512"},{"annotations":[108839,70247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a polyol, any alcohol containing three or more hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["PMID:30240188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00244":null,"SJAG_00321":null,"SJAG_00409":null,"SJAG_00880":null,"SJAG_01012":null,"SJAG_01057":null,"SJAG_01148":null,"SJAG_01154":null,"SJAG_01702":null,"SJAG_01970":null,"SJAG_02305":null,"SJAG_02321":null,"SJAG_02429":null,"SJAG_02706":null,"SJAG_03098":null,"SJAG_03275":null,"SJAG_03409":null,"SJAG_03609":null,"SJAG_03739":null,"SJAG_04048":null,"SJAG_04067":null,"SJAG_04178":null,"SJAG_04192":null,"SJAG_04320":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"polyol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyhydric alcohol metabolic process","type":"exact"},{"name":"polyol metabolism","type":"exact"}],"termid":"GO:0019751","terms_by_termid":{"GO:0006021":null,"GO:0006062":null,"GO:0006071":null,"GO:0006114":null,"GO:0006729":null,"GO:0019563":null,"GO:0019564":null,"GO:0032958":null,"GO:0043647":null,"GO:0046512":null,"GO:0061613":null,"GO:0071543":null,"GO:0071545":null}}


id: GO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root cap; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root cap mucilage metabolic process","termid":"GO:0048360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap mucilage biosynthetic process","synonyms":[{"name":"root cap mucilage anabolism","type":"exact"},{"name":"root cap mucilage biosynthesis","type":"exact"},{"name":"root cap mucilage formation","type":"exact"},{"name":"root cap mucilage synthesis","type":"exact"}],"termid":"GO:0048355"}


id: GO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate catabolic process","termid":"GO:0009131"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009175"}


id: PBO:0062856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 1","termid":"PBO:0062856"}


id: GO:0021624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"oculomotor nerve morphogenesis","termid":"GO:0021622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve structural organization","synonyms":[{"name":"CN III structural organization","type":"related"},{"name":"oculomotor nerve structural organisation","type":"exact"}],"termid":"GO:0021624"}


id: GO:0052603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-chloro-4-nitrosobenzene + NADPH + H+ = 1-chloro-4-hydroxylaminobenzene + NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-8834"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-chloro-4-nitrosobenzene nitroreductase activity (obsolete GO:0052603)","termid":"GO:0052603"}


id: MONDO:0032895
data:
  {"annotated_genes":["SJAG_01089","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87038,87039],"is_not":false,"summary":null,"term":"MONDO:0032895"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 83","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231487","OMIM:618744","DOID:0112218","MEDGEN:1684784"],"synonyms":[{"name":"Barakat-Perenthaler Syndrome","type":"related"},{"name":"DEE83","type":"exact"},{"name":"EIEE83","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 83","type":"exact"},{"name":"developmental and epileptic encephalopathy 83","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 83","type":"exact"}],"termid":"MONDO:0032895","terms_by_termid":{"MONDO:0032895":null},"xrefs":{"Monarch":{"xref_id":"0032895"}}}


id: PBO:0059673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 39","termid":"PBO:0059673"}


id: FYECO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"A nitrogen source shift condition in which cells are first grown in a medium with glutamate as the nitrogen source, and then shifted to a medium with proline as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen source shift","termid":"FYECO:0000221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift, glutamate to proline","termid":"FYECO:0000220"}


id: PBO:0079790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A11, pseudogene","termid":"PBO:0079790"}


id: MONDO:0012360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital hypothyroidism characterized by autosomal dominant inheritance of resistance to thyrotropin that has material basis in variation in the chromosome region 15q25.3-q26.1.","definition_xrefs":["DOID:0070127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"},{"relation_name":"is_a","term_name":"peripheral resistance to thyroid hormones","termid":"MONDO:0019995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nongoitrous hypothyroidism 3","secondary_identifiers":["MESH:C567935","OMIM:609893","UMLS:C2940785","MEDGEN:424853"],"synonyms":[{"name":"CHNG3","type":"exact"},{"name":"congenital nongoitrous hypothyroidism 3","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 3","type":"exact"},{"name":"resistance to thyrotropin","type":"related"},{"name":"thyrotropin resistance","type":"related"}],"termid":"MONDO:0012360","xrefs":{"Monarch":{"xref_id":"0012360"}}}


id: PBO:0062374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 17","termid":"PBO:0062374"}


id: MONDO:0011685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysubstance abuse, susceptibility to","secondary_identifiers":["OMIM:606581","MEDGEN:339856","UMLS:C1847831"],"synonyms":[{"name":"PSAB","type":"related"},{"name":"drug addiction, susceptibility to","type":"related"},{"name":"polysubstance abuse, susceptibility to","type":"exact"}],"termid":"MONDO:0011685","xrefs":{"Monarch":{"xref_id":"0011685"}}}


id: MONDO:0009325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deafness-enamel hypoplasia-nail defects syndrome (obsolete MONDO:0009325)","termid":"MONDO:0009325","xrefs":{"Monarch":{"xref_id":"0009325"}}}


id: PBO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual serine/threonine and tyrosine protein kinase","termid":"PBO:0045514"}


id: MONDO:0018684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic neonatal atrial flutter (AFL) is a rare rhythm disorder, characterized by sustained tachycardia in newborns and infants with an atrial rate often at around 440 beats/minute (range 340-580). AFL may manifest as asymptomatic tachycardia, congestive heart failure or hydrops.","definition_xrefs":["Orphanet:45452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial flutter","termid":"MONDO:0005310"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"idiopathic neonatal atrial flutter","secondary_identifiers":["GARD:18831","icd11.foundation:208964573","MEDGEN:904097","SCTID:715560009","UMLS:C4275090","ICD10CM:P29.1"],"synonyms":[{"name":"neonatal cardiac dysrhythmia","type":"exact"}],"termid":"MONDO:0018684","xrefs":{"Monarch":{"xref_id":"0018684"}}}


id: PBO:0089178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5","termid":"PBO:0089178"}


id: PBO:0116317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase F(o) subunit K, Atp19","termid":"PBO:0116317"}


id: MONDO:1010912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, domestic cat","secondary_identifiers":["OMIA:000679-9685"],"termid":"MONDO:1010912","xrefs":{"Monarch":{"xref_id":"1010912"}}}


id: PBO:0065465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 7 pseudogene 1","termid":"PBO:0065465"}


id: PBO:0073580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2A","termid":"PBO:0073580"}


id: PBO:0087481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin modifying histone acetyltransferase complexes; member of the ADA complex, the SAGA complex, and the SLIK complex; transcriptional regulator involved in glucose repression of Gal4p-regulated genes","termid":"PBO:0087481"}


id: PBO:0058022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3972","termid":"PBO:0058022"}


id: MONDO:0017166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of salivary glands (obsolete MONDO:0017166)","secondary_identifiers":["Orphanet:276142"],"termid":"MONDO:0017166","xrefs":{"Monarch":{"xref_id":"0017166"}}}


id: GO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rubidium ions (Rb+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete rubidium ion transport (obsolete GO:0035826)","synonyms":[{"name":"Rb+ transport","type":"exact"},{"name":"rubidium cation transport","type":"exact"}],"termid":"GO:0035826"}


id: GO:1902560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oxidoreductase complex which is capable of GMP reductase activity. It catalyses the irreversible reaction: GMP + 2 H+ + NADPH => IMP + NADP+ + NH4.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:12009299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GMP reductase complex","synonyms":[{"name":"GMP reductase","type":"narrow"},{"name":"GMPR1 complex","type":"narrow"},{"name":"GMPR2 complex","type":"narrow"},{"name":"guanosine monophosphate reductase","type":"narrow"}],"termid":"GO:1902560"}


id: PBO:0049848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme binding protein 1","termid":"PBO:0049848"}


id: MOD:01796
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 1x(13)C,3x(2)H C(6)-labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:15782174","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"1x(13)C,3x(2)H labeled monomethylated residue","termid":"MOD:01794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H C(6)-labeled L-methionine sulfoxide","termid":"MOD:01796"}


id: GO:0040003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a chitin-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle development","synonyms":[{"name":"chitin-based cuticle anabolism","type":"exact"},{"name":"chitin-based cuticle biosynthetic process","type":"exact"},{"name":"chitin-based cuticle formation","type":"exact"},{"name":"chitin-based cuticle synthesis","type":"exact"}],"termid":"GO:0040003"}


id: PBO:0060543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAV2 antisense RNA 3","termid":"PBO:0060543"}


id: PBO:0082297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARN family transporter for siderophore-iron chelates; responsible for uptake of iron bound to ferrirubin, ferrirhodin, and related siderophores; protein increases in abundance and relocalizes to the vacuole upon DNA replication stress","termid":"PBO:0082297"}


id: GO:0000836
data:
  {"annotated_genes":["SJAG_01709","SJAG_03841","SJAG_01051","SJAG_04384","SJAG_03345","SJAG_05274","SJAG_01134"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89595,104284,105134,105619,107985,109875,117452],"is_not":false,"summary":null,"term":"GO:0000836"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded luminal and membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p. In mammals, this complex contains the ubiquitin ligase HRD1 (Synoviolin) or AMFR (gp78).","definition_xrefs":["GOC:bf","GOC:elh","PMID:16873066","PMID:16619026","PMID:21454652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER ubiquitin ligase complex","termid":"GO:0000835"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01051":null,"SJAG_01134":null,"SJAG_01709":null,"SJAG_03345":null,"SJAG_03841":null,"SJAG_04384":null,"SJAG_05274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005783","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HRD1 ubiquitin ligase complex","type":"related"}],"termid":"GO:0000836","terms_by_termid":{"GO:0000836":null}}


id: MONDO:0019543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired aneurysmal subarachnoid hemorrhage is a serious, life threatening rare neurologic disease characterized by a sudden rupture of an intracranial aneurysm into the subarachnoid space. It usually presents with a sudden, severe, excruciating headache accompanied by nausea, vomiting and syncope. Other features may include focal neurological signs, third and sixth nerve palsies, seizures and cardiac failure. Early complications include rebleeding, hydrocephalus, and seizures.","definition_xrefs":["Orphanet:90065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subarachnoid hemorrhage","termid":"MONDO:0005099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired aneurysmal subarachnoid hemorrhage","secondary_identifiers":["UMLS:C0338572","GARD:19114","MEDGEN:572642","icd11.foundation:958976948"],"termid":"MONDO:0019543","xrefs":{"Monarch":{"xref_id":"0019543"}}}


id: GO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.","definition_xrefs":["GOC:elh","PMID:10915863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"photoreactive repair","synonyms":[{"name":"pyrimidine-dimer repair by photolyase","type":"narrow"}],"termid":"GO:0000719"}


id: PBO:0089782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in rescue of stalled ribosomes","termid":"PBO:0089782"}


id: GO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid membrane","termid":"GO:0043664"}


id: PBO:0036024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036024"}


id: GO:2000432
data:
  {"annotated_genes":["SJAG_03048","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98602],"is_not":false,"summary":null,"term":"GO:2000432"},{"annotations":[102683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytokinesis, actomyosin contractile ring assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"negatively_regulates","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02795":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"negative regulation of cytokinesis, actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of contractile ring assembly","type":"exact"}],"termid":"GO:2000432","terms_by_termid":{"GO:1903500":null,"GO:2000432":null}}


id: GO:0046146
data:
  {"annotated_genes":["SJAG_03275","SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70247,108839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006729"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine.","definition_xrefs":["PMID:21871890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"tetrahydrobiopterin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1474151"],"synonyms":[{"name":"5,6,7,8-tetrahydrobiopterin metabolic process","type":"exact"},{"name":"tetrahydrobiopterin metabolism","type":"exact"}],"termid":"GO:0046146","terms_by_termid":{"GO:0006729":null}}


id: PBO:0047580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 3","termid":"PBO:0047580"}


id: FYECO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with ammonium as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, ammonium nitrogen source","termid":"FYECO:0000254"}


id: GO:1901853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["UniPathway:UPA00069","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin metabolism","type":"exact"}],"termid":"GO:1901853"}


id: PBO:0075137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A'","termid":"PBO:0075137"}


id: PBO:0061393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin/nucleoplasmin 2","termid":"PBO:0061393"}


id: PBO:0026837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G1_phase","termid":"PBO:0026837"}


id: PBO:0114110
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"much shorter than S. c Ina22, butpicked up by Jackhmmr with good score/motif conservation","termid":"PBO:0114110"}


id: GO:0048213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The binding of specific proteins to the t-SNARE/v-SNARE/SNAP25 complex, by which the Golgi vesicle prefusion complex is stabilized.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi vesicle prefusion complex stabilization (obsolete GO:0048213)","synonyms":[{"name":"Golgi vesicle prefusion complex assembly","type":"exact"},{"name":"Golgi-derived vesicle prefusion complex stabilization","type":"exact"},{"name":"dictyosome vesicle prefusion complex stabilisation","type":"narrow"}],"termid":"GO:0048213"}


id: GO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075705)","synonyms":[{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral penetration via endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075705"}


id: PBO:0088278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRG1-like transcriptional repressor, zinc finger C2H2-type","termid":"PBO:0088278"}


id: PBO:0055175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2599","termid":"PBO:0055175"}


id: PBO:0055305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2732","termid":"PBO:0055305"}


id: MONDO:0013311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-syndactyly syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by sparse to absent scalp hair, eyebrows, and eyelashes (with pili torti when present), widely spaced, conical-shaped teeth with peg-shaped, conical crowns and enamel hypoplasia and palmoplantar hyperkeratosis, associated with partial cutaneous syndactyly in hands and feet.","definition_xrefs":["Orphanet:247820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia-syndactyly syndrome","secondary_identifiers":["OMIMPS:613573","GARD:17198","UMLS:C4749852","MEDGEN:1648397"],"synonyms":[{"name":"EDSS","type":"exact"},{"name":"EDSS1","type":"exact"},{"name":"ectodermal dysplasia-syndactyly syndrome 1","type":"related"},{"name":"ectodermal dysplasia-syndactyly syndrome type 1","type":"exact"}],"termid":"MONDO:0013311","xrefs":{"Monarch":{"xref_id":"0013311"}}}


id: PBO:0028808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_genetic_imprinting_at_mating-type_locus","termid":"PBO:0028808"}


id: PBO:0067116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 160, pseudogene","termid":"PBO:0067116"}


id: MONDO:0000833
data:
  {"annotated_genes":["SJAG_00993","SJAG_02342","SJAG_00516","SJAG_01183","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009815"},{"annotations":[85841,85842,85840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007970"},{"annotations":[86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957262"}]},"cv_name":"mondo","definition":"A bone disease that results in formation or resorption abnormalities located in bone.","definition_xrefs":["DOID:0080005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01183":null,"SJAG_02342":null},"genotype_count":0,"is_obsolete":false,"name":"bone remodeling disease","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0000833","terms_by_termid":{"MONDO:0007970":null,"MONDO:0009815":null,"MONDO:0957262":null},"xrefs":{"Monarch":{"xref_id":"0000833"}}}


id: PBO:0011079
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ABD1","termid":"PBO:0011079"}


id: GO:0005316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction:phosphate(out) + Na+(out) = phosphate(in) + Na+(in). In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:2.A.20.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:phosphate symporter activity","termid":"GO:0005436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity phosphate:sodium symporter activity","synonyms":[{"name":"high affinity inorganic phosphate:sodium symporter activity","type":"exact"},{"name":"high-affinity inorganic phosphate:sodium symporter activity","type":"exact"},{"name":"sodium/phosphate cotransporter activity","type":"broad"}],"termid":"GO:0005316"}


id: MONDO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete megalencephaly-polymicrogyria-polydactyly-hydrocephalus syndrome (obsolete MONDO:0000176)","termid":"MONDO:0000176","xrefs":{"Monarch":{"xref_id":"0000176"}}}


id: PBO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase subunit Trm82 (predicted)","termid":"PBO:0005713"}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13889:SF2","OMA:SCHPO04369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: PBO:0067669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 849, pseudogene","termid":"PBO:0067669"}


id: GO:0062046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dehydropipecolic acid + NAD(P)H + H+ = L-pipecolic acid + NAD(P)+.","definition_xrefs":["PMID:27758894","PMID:28330936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"dehydropipecolic acid reductase","termid":"GO:0062046"}


id: GO:0004650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.","definition_xrefs":["EC:3.2.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"polygalacturonase activity","secondary_identifiers":["MetaCyc:RXN-2103"],"synonyms":[{"name":"endo-D-galacturonase activity","type":"exact"},{"name":"endo-polygalacturonase activity","type":"exact"},{"name":"endogalacturonase activity","type":"exact"},{"name":"endopolygalacturonase activity","type":"exact"},{"name":"pectin depolymerase activity","type":"narrow"},{"name":"pectin hydrolase activity","type":"related"},{"name":"pectin polygalacturonase activity","type":"related"},{"name":"pectinase activity","type":"narrow"},{"name":"pectolase activity","type":"related"},{"name":"poly(1,4-alpha-D-galacturonide) glycanohydrolase activity","type":"exact"},{"name":"poly-alpha-1,4-galacturonide glycanohydrolase activity","type":"exact"}],"termid":"GO:0004650"}


id: GO:0060099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"is_a","term_name":"regulation of membrane invagination","termid":"GO:1905153"},{"relation_name":"regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"}


id: PBO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member A","termid":"PBO:0039596"}


id: MONDO:0033258
data:
  {"annotated_genes":["SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85708],"is_not":false,"summary":null,"term":"MONDO:0033258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 71","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080267","OMIM:617605","UMLS:C4539881","MEDGEN:1621646","GARD:18147"],"synonyms":[{"name":"DFNA71","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 71","type":"narrow"},{"name":"deafness, autosomal dominant 71","type":"narrow"}],"termid":"MONDO:0033258","terms_by_termid":{"MONDO:0033258":null},"xrefs":{"Monarch":{"xref_id":"0033258"}}}


id: PBO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 6","termid":"PBO:0050086"}


id: MONDO:0015906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with hypergonadotropic hypogonadism (obsolete MONDO:0015906)","secondary_identifiers":["Orphanet:181441"],"synonyms":[{"name":"rare disorder with primary hypogonadism","type":"exact"}],"termid":"MONDO:0015906","xrefs":{"Monarch":{"xref_id":"0015906"}}}


id: GO:0102404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: linalyl 6-O-alpha-L-arabinopyranosyl- beta-D-glucopyranoside + H2O = vicianose + linalool.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete linalyl 6-O-alpha-L-arabinopyranosyl-beta-D-glucopyranoside glucosidase (Yabukita) activity (obsolete GO:0102404)","termid":"GO:0102404"}


id: PBO:0040956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 27","termid":"PBO:0040956"}


id: FYPO:0004504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which proteasome localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal proteasome localization","synonyms":[{"name":"normal proteasome localisation","type":"exact"},{"name":"normal proteasome localization during mitotic cell cycle","type":"related"},{"name":"normal proteasome localization during vegetative growth","type":"exact"},{"name":"normal proteasome location","type":"related"}],"termid":"FYPO:0004504"}


id: PBO:0012836
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by H. sapiens KRAS","termid":"PBO:0012836"}


id: MONDO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nocardiosis (obsolete MONDO:0005877)","termid":"MONDO:0005877","xrefs":{"Monarch":{"xref_id":"0005877"}}}


id: PBO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Septum Promoting GTPase","termid":"PBO:0012832"}


id: PBO:0029939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_divided_and_undivided_germinated_spores,_with_elongated_germ_tubes_(obsolete_FYPO:0002298)","termid":"PBO:0029939"}


id: MONDO:1011231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, sheep","secondary_identifiers":["OMIA:000337-9940"],"termid":"MONDO:1011231","xrefs":{"Monarch":{"xref_id":"1011231"}}}


id: MONDO:1011572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, domestic ferret","secondary_identifiers":["OMIA:000181-9669"],"termid":"MONDO:1011572","xrefs":{"Monarch":{"xref_id":"1011572"}}}


id: PBO:0001040
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Mbx1","termid":"PBO:0001040"}


id: FYPO:0007801
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119737],"is_not":false,"summary":null,"term":"FYPO:0007801"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a dividing cell at the growith end of a hypha has a septum in an abnormal location. Normally, the septum forms in the cytosol-enriched portion of the cell, displaced slightly off-center toward the portion of the cell occupied by the vacuole.","definition_xrefs":["PomBase:mah","PMID:30726171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized hyphal septum","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"abnormal hyphal septum localization","type":"related"},{"name":"abnormal hyphal septum location","type":"exact"},{"name":"abnormal hyphal septum position","type":"exact"},{"name":"abnormal hyphal septum positioning","type":"related"},{"name":"mislocalised hyphal septum","type":"exact"},{"name":"mislocalized septum during hyphal growth","type":"exact"},{"name":"mislocalized septum in hypha","type":"exact"},{"name":"mislocalized septum in hyphal growth","type":"exact"},{"name":"misplaced hyphal septum","type":"exact"}],"termid":"FYPO:0007801","terms_by_termid":{"FYPO:0007801":null}}


id: MONDO:0014020
data:
  {"annotated_genes":["SJAG_00308"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85636],"is_not":false,"summary":null,"term":"MONDO:0014020"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00308":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"hereditary spastic paraplegia 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615035","GARD:17474","DOID:0110807","Orphanet:320375","SCTID:723825006","MEDGEN:761342","UMLS:C3539506"],"synonyms":[{"name":"SPG55","type":"exact"},{"name":"autosomal recessive spastic paraplegia 55","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 55","type":"exact"},{"name":"hereditary spastic paraplegia type 55","type":"exact"},{"name":"spastic paraplegia 55, autosomal recessive","type":"related"}],"termid":"MONDO:0014020","terms_by_termid":{"MONDO:0014020":null},"xrefs":{"Monarch":{"xref_id":"0014020"}}}


id: MONDO:0100517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sphingolipidosis caused by variants in the PSAP gene. Clinical and biochemical features vary based on the location of variants within the gene and their molecular impact.","direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"PSAP-related sphingolipidosis","termid":"MONDO:0100517","xrefs":{"Monarch":{"xref_id":"0100517"}}}


id: PBO:0112755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 3 (cytochrome a3 subunit)","termid":"PBO:0112755"}


id: MONDO:0010081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic stenosis, membranous","secondary_identifiers":["MESH:C564793","MEDGEN:336468","GARD:18242","OMIM:271950","UMLS:C1848979"],"synonyms":[{"name":"subaortic stenosis, membranous","type":"exact"}],"termid":"MONDO:0010081","xrefs":{"Monarch":{"xref_id":"0010081"}}}


id: PBO:0078895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 6-1","termid":"PBO:0078895"}


id: PBO:0085429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine acetyltransferase; acetylates polyamines (e.g. putrescine, spermidine, spermine) and also aralkylamines (e.g. tryptamine, phenylethylamine); may be involved in transcription and/or DNA replication","termid":"PBO:0085429"}


id: MONDO:0010353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by severe bilateral deafness, intellectual deficit, umbilical hernia and abnormal dermatoglyphics. It has been described in three males from three generations of one family. Mild facial dysmorphism (telangiectasias, hypertelorism, dental anomalies and a wide nasal root) was also present. Short stature, pancytopaenia, microcephaly, and renal and genitourinary anomalies were present in some of the patients. The mode of transmission is X-linked recessive and the causative gene has been localized to the q1-21 region of the X chromosome.","definition_xrefs":["Orphanet:85321"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-intellectual disability, Martin-Probst type syndrome","secondary_identifiers":["DOID:0060830","GARD:16750","MEDGEN:375620","MESH:C564495","UMLS:C1845285","OMIM:300519","SCTID:721087008"],"synonyms":[{"name":"MRXSMP","type":"related"},{"name":"Martin-Probst deafness-intellectual disability syndrome","type":"related"},{"name":"Martin-Probst deafness-mental retardation syndrome","type":"related"},{"name":"Martin-Probst syndrome","type":"exact"},{"name":"X-linked deafness-intellectual disability syndrome syndrome","type":"exact"},{"name":"deafness-intellectual disability syndrome, Martin-Probst type","type":"related"},{"name":"intellectual disability, X-linked, syndromic, MARTIN-Probst type","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Martin-Probst type","type":"exact"},{"name":"martin-probst syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked, syndromic, MARTIN-Probst type","type":"related"},{"name":"mental retardation, X-linked, syndromic, Martin-Probst type","type":"exact"}],"termid":"MONDO:0010353","xrefs":{"Monarch":{"xref_id":"0010353"}}}


id: PBO:0052767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 59","termid":"PBO:0052767"}


id: MONDO:1012577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurocristopathy in cattle in which the cause of the disease is a mutation in the CHD7 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"neurocristopathy, non-human animal","termid":"MONDO:1011337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocristopathy, CHD7-related, cattle","secondary_identifiers":["OMIA:002125-9913"],"termid":"MONDO:1012577","xrefs":{"Monarch":{"xref_id":"1012577"}}}


id: MONDO:1012768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cancer that occurs in crab-eating macaques due to a mutation in the TP53 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, TP53-related, crab-eating macaque","secondary_identifiers":["OMIA:001990-9541"],"termid":"MONDO:1012768","xrefs":{"Monarch":{"xref_id":"1012768"}}}


id: PBO:0075255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 8","termid":"PBO:0075255"}


id: PBO:0068729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 18, pseudogene","termid":"PBO:0068729"}


id: GO:1904428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tubulin deacetylation.","definition_xrefs":["GO_REF:0000058","PMID:23886946","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of tubulin deacetylation","termid":"GO:0090043"},{"relation_name":"negatively_regulates","term_name":"tubulin deacetylation","termid":"GO:0090042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tubulin deacetylation","synonyms":[{"name":"down regulation of tubulin deacetylation","type":"exact"},{"name":"down-regulation of tubulin deacetylation","type":"exact"},{"name":"downregulation of tubulin deacetylation","type":"exact"},{"name":"inhibition of tubulin deacetylation","type":"narrow"}],"termid":"GO:1904428"}


id: GO:0043686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of covalently altering one or more amino acids in a protein after translation has begun but before the protein has been released from the ribosome.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"co-translational protein modification","synonyms":[{"name":"co-translational amino acid modification","type":"exact"},{"name":"co-translational modification","type":"exact"},{"name":"cotranslational amino acid modification","type":"exact"},{"name":"cotranslational modification","type":"exact"},{"name":"cotranslational protein modification","type":"exact"}],"termid":"GO:0043686"}


id: GO:0034163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 9 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 9 signaling pathway","termid":"GO:0034162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 9 signaling pathway","synonyms":[{"name":"regulation of TLR9 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034163"}


id: MONDO:0020090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to gonadal dysgenesis (obsolete MONDO:0020090)","secondary_identifiers":["Orphanet:98313"],"synonyms":[{"name":"Male infertility due to testicular dysgenesis","type":"exact"}],"termid":"MONDO:0020090","xrefs":{"Monarch":{"xref_id":"0020090"}}}


id: GO:0032737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of interleukin-14 production (obsolete GO:0032737)","synonyms":[{"name":"activation of interleukin-14 production","type":"narrow"},{"name":"positive regulation of IL-14 production","type":"exact"},{"name":"positive regulation of interleukin-14 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-14 production","type":"narrow"},{"name":"up regulation of interleukin-14 production","type":"exact"},{"name":"up-regulation of interleukin-14 production","type":"exact"},{"name":"upregulation of interleukin-14 production","type":"exact"}],"termid":"GO:0032737"}


id: MONDO:0009634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia with meatal atresia and conductive deafness","secondary_identifiers":["MESH:C537469","UMLS:C2931502","OMIM:251800","MEDGEN:419093"],"synonyms":[{"name":"Gupta Patton syndrome","type":"related"},{"name":"familial microtia and meatal atresia","type":"related"},{"name":"familial microtia with meatal atresia and conductive deafness","type":"related"},{"name":"microtia meatal atresia deafness dominant","type":"related"},{"name":"microtia with meatal atresia and conductive deafness","type":"exact"},{"name":"microtia, meatal atresia and conductive deafness","type":"related"}],"termid":"MONDO:0009634","xrefs":{"Monarch":{"xref_id":"0009634"}}}


id: MONDO:0800179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the joint that is a complication occurring in 1% to 2% of primary arthroplasties.","definition_xrefs":["PMID:33380199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periprosthetic joint infection","termid":"MONDO:0800179","xrefs":{"Monarch":{"xref_id":"0800179"}}}


id: PBO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 1","termid":"PBO:0051929"}


id: PBO:0072412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 17","termid":"PBO:0072412"}


id: GO:0010282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lytic vacuole that is maintained at acidic pH and has different tonoplast composition compared to the central vacuole. Found during leaf senescence and develops in the peripheral cytoplasm of cells that contain chloroplast.","definition_xrefs":["PMID:15743448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole","termid":"GO:0000323"},{"relation_name":"is_a","term_name":"plant-type vacuole","termid":"GO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"senescence-associated vacuole","synonyms":[{"name":"senescence associated vacuole","type":"exact"}],"termid":"GO:0010282"}


id: GO:0075077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont adenylate cyclase activity (obsolete GO:0075077)","termid":"GO:0075077"}


id: PBO:0041036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRAF pseudogene 1","termid":"PBO:0041036"}


id: MONDO:0022818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital aneurysms of the great vessels","termid":"MONDO:0022818","xrefs":{"Monarch":{"xref_id":"0022818"}}}


id: GO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the mitochondrial membrane.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex (obsolete GO:0005753)","synonyms":[{"name":"mitochondrial respiratory chain complex V","type":"exact"}],"termid":"GO:0005753"}


id: PATO:0000032
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000032 secondary product composition (obsolete PATO:0000032)","termid":"PATO:0000032"}


id: PR:O94431
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- egt2 gene.","definition_xrefs":["UniProtKB:O94431","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hercynylcysteine sulfoxide lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.12c","synonyms":[{"name":"PLP-binding cysteine desulfurase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PLP-dependent C-S lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-egt2","type":"exact"},{"name":"ergothioneine biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94431"}


id: PBO:0078453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5P (pseudogene)","termid":"PBO:0078453"}


id: MONDO:0010742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pentalogy of Cantrell (POC) is a lethal multiple congenital anomalies syndrome, characterized by the presence of 5 major malformations: midline supraumbilical abdominal wall defect, lower sternal defect, diaphragmatic pericardial defect, anterior diaphragmatic defect and various intracardiac malformations. Ectopia cordis (EC) is often found in fetuses with POC.","definition_xrefs":["Orphanet:1335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Cantrell","secondary_identifiers":["MEDGEN:107540","UMLS:C0559483","NORD:1566","ICD9:759.89","NCIT:C99011","OMIM:313850","MESH:D058502","GARD:7359","SCTID:281587000"],"synonyms":[{"name":"Cantrell Haller Ravitsch syndrome","type":"related"},{"name":"Cantrell deformity","type":"exact"},{"name":"Cantrell pentalogy","type":"related"},{"name":"Cantrell syndrome","type":"exact"},{"name":"Midline defects, X-linked","type":"related"},{"name":"THAS","type":"related"},{"name":"Tas","type":"related"},{"name":"pentalogy of Cantrell","type":"exact"},{"name":"thoraco-abdominal syndrome","type":"exact"},{"name":"thoracoabdominal syndrome","type":"related"}],"termid":"MONDO:0010742","xrefs":{"Monarch":{"xref_id":"0010742"}}}


id: GO:1904602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of serotonin-activated cation-selective channel activity. Mainly found in pre- and postsynaptic membranes of the brain and gastrointestinal tract. Depending on its location it transports Ca2+, Mg2+, Na+ or K+. It is always a pentamer, containing at least the 5HT3A subunit forming 5HT3A homopentamers or 5HT3A/B heteropentamers. In human, 5HT3A/C, A/D and A/E heteropentamers also exist.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:16116092","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"},{"relation_name":"is_a","term_name":"serotonin receptor complex","termid":"GO:0098665"},{"relation_name":"is_a","term_name":"neurotransmitter receptor complex","termid":"GO:0098878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serotonin-activated cation-selective channel complex","synonyms":[{"name":"5-HT-3 receptor complex","type":"exact"},{"name":"5-HT3 receptor complex","type":"exact"},{"name":"5-hydroxytryptamine receptor 3 complex","type":"exact"},{"name":"5HT3 receptor complex","type":"exact"},{"name":"serotonin receptor complex","type":"broad"}],"termid":"GO:1904602"}


id: GO:0042663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into an endoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"regulates","term_name":"endodermal cell fate specification","termid":"GO:0001714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endodermal cell fate specification","synonyms":[{"name":"regulation of endoderm cell fate specification","type":"exact"}],"termid":"GO:0042663"}


id: PBO:0060890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NETO1 divergent transcript","termid":"PBO:0060890"}


id: MONDO:0044723
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87351,87352],"is_not":false,"summary":null,"term":"MONDO:0044723"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070000","Orphanet:505208","GARD:22050","MEDGEN:934617","OMIM:617248","UMLS:C4310650"],"synonyms":[{"name":"3-Methylglutaconic aciduria, type 8","type":"related"},{"name":"3-methylglutaconic aciduria type VIII","type":"related"},{"name":"3-methylglutaconic aciduria type VIII, MGCA8","type":"exact"},{"name":"3-methylglutaconic aciduria, type VIII","type":"exact"},{"name":"3-methylglutaconic aciduria, type VIII; MGCA8","type":"exact"},{"name":"MGA8","type":"exact"},{"name":"MGCA8","type":"exact"}],"termid":"MONDO:0044723","terms_by_termid":{"MONDO:0044723":null},"xrefs":{"Monarch":{"xref_id":"0044723"}}}


id: PBO:0084241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of the Anaphase-Promoting Complex/Cyclosome (APC/C); binds to APC/C and inhibits the activity of both APC/C(Cdc20) and APC/C(Cdh1); inhibits the binding of Cdc20 and Cdh1 to APC/C; overexpression results in increased sensitivity to microtubule poison; originally identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; functional homolog of human MAD2L1BP (p31comet)","termid":"PBO:0084241"}


id: PBO:0087158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAPII degradation factor; forms a complex with Rad26p in chromatin, enables ubiquitination and proteolysis of RNAPII present in an elongation complex; interacts with general transcription factor TFIIH; mutant is deficient in Zip1p loading onto chromosomes during meiosis","termid":"PBO:0087158"}


id: MONDO:1010772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus, non-human animal","termid":"MONDO:1010138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pemphigus, dog","secondary_identifiers":["OMIA:001188-9615"],"termid":"MONDO:1010772","xrefs":{"Monarch":{"xref_id":"1010772"}}}


id: GO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in dividing cells as they age as a result of oxidative stress, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to oxidative stress involved in replicative cell aging (obsolete GO:0001322)","synonyms":[{"name":"age-dependent response to oxidative stress during replicative cell ageing","type":"related"},{"name":"age-dependent response to oxidative stress during replicative cell aging","type":"related"}],"termid":"GO:0001322"}


id: PBO:0068817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 55, pseudogene","termid":"PBO:0068817"}


id: MONDO:0002907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Formation or presence of a blood clot (thrombus) in a blood vessel within the skull. Intracranial thrombosis can lead to thrombotic occlusions and brain infarction. The majority of the thrombotic occlusions are associated with atherosclerosis.","definition_xrefs":["MESH:D020767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial thrombosis","secondary_identifiers":["ICD9:434.00","DOID:4193","SCTID:71444005","ICD9:434.0","MEDGEN:199820","UMLS:C0752143"],"synonyms":[{"name":"cerebral thrombosis","type":"exact"}],"termid":"MONDO:0002907","xrefs":{"Monarch":{"xref_id":"0002907"}}}


id: PBO:0047533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 5 pseudogene 1","termid":"PBO:0047533"}


id: GO:0033843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an alpha-D-xylosyl residue from UDP-D-xylose to a glucose residue in xyloglucan, forming an alpha-1,6-D-xylosyl-D-glucose linkage.","definition_xrefs":["EC:2.4.2.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylosyltransferase activity","termid":"GO:0042285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xyloglucan 6-xylosyltransferase activity","synonyms":[{"name":"UDP-D-xylose:xyloglucan 1,6-alpha-D-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-xyloglucan 6alpha-xylosyltransferase activity","type":"related"},{"name":"xyloglucan 6-alpha-D-xylosyltransferase activity","type":"related"}],"termid":"GO:0033843"}


id: MONDO:1012471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pentalogy of Fallot, non-human animal","termid":"MONDO:1011650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentalogy of Fallot, sheep","secondary_identifiers":["OMIA:001857-9940"],"termid":"MONDO:1012471","xrefs":{"Monarch":{"xref_id":"1012471"}}}


id: PBO:0072471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA 2","termid":"PBO:0072471"}


id: PBO:0042256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 3","termid":"PBO:0042256"}


id: MONDO:0021377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of lichen planus that is characterized by plaques of markedly thickened skin that is often extremely pruritic and localized to the lower legs. It can result in permanent pigmentation and scarring.","definition_xrefs":["NCIT:C34779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypertrophic lichen planus","secondary_identifiers":["icd11.foundation:1096967508","MEDGEN:9756","SCTID:68266006","UMLS:C0023649"],"synonyms":[{"name":"Hypertrophic Lichen Planus","type":"related"},{"name":"Hypertrophic lichen planus","type":"related"},{"name":"Lichen planus hypertrophicus","type":"related"},{"name":"hypertrophic lichen planus","type":"exact"},{"name":"lichen planus hypertrophicus","type":"related"}],"termid":"MONDO:0021377","xrefs":{"Monarch":{"xref_id":"0021377"}}}


id: GO:0009803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cinnamic acid, 3-phenyl-2-propenoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"cinnamic acid metabolic process","synonyms":[{"name":"cinnamic acid metabolism","type":"exact"},{"name":"cinnamylic acid metabolic process","type":"exact"},{"name":"cinnamylic acid metabolism","type":"exact"},{"name":"phenylacrylic acid metabolic process","type":"exact"},{"name":"phenylacrylic acid metabolism","type":"exact"},{"name":"phenylpropenoic acid metabolic process","type":"exact"},{"name":"phenylpropenoic acid metabolism","type":"exact"}],"termid":"GO:0009803"}


id: PBO:0043789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPEB1 antisense RNA 1","termid":"PBO:0043789"}


id: GO:0018746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-3,4-oxide + H2O = trans-3,4-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-3,4-epoxide hydrolase activity (obsolete GO:0018746)","termid":"GO:0018746"}


id: FYPO:0004661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal protein tyrosine phosphorylation during vegetative growth (obsolete FYPO:0004661)","synonyms":[{"name":"normal protein tyrosine phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004661"}


id: GO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of polysaccharides by salivary amylase. Salivary amylase is released by salivary glands, usually in the mouth.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete salivary polysaccharide catabolic process (obsolete GO:0044239)","synonyms":[{"name":"salivary polysaccharide breakdown","type":"exact"},{"name":"salivary polysaccharide catabolism","type":"exact"},{"name":"salivary polysaccharide degradation","type":"exact"}],"termid":"GO:0044239"}


id: GO:0006003
data:
  {"annotated_genes":["SJAG_03336","SJAG_00039","SJAG_02713","SJAG_02596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73760,75376,79227,80694],"is_not":false,"summary":null,"term":"GO:0006003"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose 2,6-bisphosphate. The D enantiomer is an important regulator of the glycolytic and gluconeogenic pathways. It inhibits fructose 1,6-bisphosphatase and activates phosphofructokinase.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructose 2,6-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"fructose 2,6-bisphosphate metabolism","type":"exact"}],"termid":"GO:0006003","terms_by_termid":{"GO:0006003":null}}


id: PBO:0028159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5.8S_rRNA_level","termid":"PBO:0028159"}


id: GO:0035761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the dorsal motor nucleus of the vagus nerve to attain its fully functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"dorsal motor nucleus of vagus nerve development","termid":"GO:0021744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal motor nucleus of vagus nerve maturation","termid":"GO:0035761"}


id: GO:0044837
data:
  {"annotated_genes":["SJAG_04930","SJAG_01894","SJAG_00268","SJAG_04621","SJAG_01143","SJAG_04597","SJAG_02831","SJAG_00082","SJAG_03088","SJAG_03025","SJAG_02431","SJAG_03596","SJAG_04887","SJAG_00228","SJAG_00279","SJAG_04703","SJAG_01732","SJAG_02795","SJAG_03045","SJAG_03048","SJAG_02700","SJAG_00938","SJAG_03703","SJAG_04077","SJAG_00700","SJAG_02864","SJAG_04982","SJAG_03379","SJAG_01943","SJAG_01665","SJAG_01805","SJAG_02592","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105470],"is_not":false,"summary":null,"term":"GO:0044837"},{"annotations":[111111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[89668,108446,98613,98355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[102881,119816,95622,92882,97977,118177,88600,102738,112176,99225,98052,92932,72899,75940,76703,75289,98248,118761,112611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[77783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[101251,98358,102739,118178,97978,88601,99226,95623,112612,101023],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[98602],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[102683],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90339,94748],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[94150,119900],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of an actomyosin contractile ring.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"cytoskeleton-dependent cytokinesis","termid":"GO:0061640"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03088":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actomyosin contractile ring organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"cytokinesis, actomyosin contractile ring organization","type":"exact"}],"termid":"GO:0044837","terms_by_termid":{"GO:0000915":null,"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: MOD:00682
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a hydroxylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated arginine","synonyms":[{"name":"HyArg","type":"exact"}],"termid":"MOD:00682"}


id: PBO:0030272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_partial_rereplication","termid":"PBO:0030272"}


id: GO:0032240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound transport","termid":"GO:0032239"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleobase-containing compound transport","synonyms":[{"name":"down regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"down-regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"downregulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"exact"},{"name":"inhibition of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"narrow"},{"name":"negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0032240"}


id: MONDO:0024338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous neoplasm","secondary_identifiers":["MEDGEN:235339","NCIT:C7070","UMLS:C1334811"],"synonyms":[{"name":"mucinous neoplasm","type":"exact"},{"name":"mucinous tumor","type":"exact"},{"name":"mucinous tumour","type":"exact"}],"termid":"MONDO:0024338","xrefs":{"Monarch":{"xref_id":"0024338"}}}


id: GO:1990873
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane surrounding the cell tip consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the plasma membrane surrounding the cell tip or some other covalently attached group such as a GPI anchor that is similarly embedded in the plasma membrane surrounding the cell tip.","definition_xrefs":["PMID:20624220"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plasma membrane of cell tip (obsolete GO:1990873)","termid":"GO:1990873"}


id: PBO:0055381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2811","termid":"PBO:0055381"}


id: PBO:0031461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_conjugation_frequency","termid":"PBO:0031461"}


id: PBO:0079979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 17","termid":"PBO:0079979"}


id: PBO:0027024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0027024"}


id: GO:0052730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine.","definition_xrefs":["RHEA:15453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"sarcosine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07243","MetaCyc:RXN-9679"],"synonyms":[{"name":"S-adenosyl-L-methionine:N,N-sarcosine N-methyltransferase activity","type":"related"},{"name":"SDMT","type":"related"}],"termid":"GO:0052730"}


id: GO:0098927
data:
  {"annotated_genes":["SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045022"}]},"cv_name":"biological_process","definition":"A cellular transport process in which transported substances are moved in membrane-bounded vesicles between endosomal compartments, e.g, between early endosome and sorting endosome.","definition_xrefs":["GOC:dos","PMID:10930469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosomal transport","termid":"GO:0016197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle-mediated transport between endosomal compartments","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0098927","terms_by_termid":{"GO:0045022":null}}


id: GO:0008242
data:
  {"annotated_genes":["SJAG_03316","SJAG_01612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78919,74016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036374"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of non-standard peptide bonds releasing substituted amino acids such as pyroglutamate or cleave isopeptide bonds, such as many deubiquitinating enzymes.","definition_xrefs":["EC:3.4.19.-","PMID:20157488","PMID:9920379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01612":null,"SJAG_03316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"omega peptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"peptidase activity, acting on peptides containing modified amino acids","type":"related"}],"termid":"GO:0008242","terms_by_termid":{"GO:0036374":null}}


