# terms

id: GO:0008311
data:
  {"annotated_genes":["SJAG_02298","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73589,88891],"is_not":false,"summary":null,"term":"GO:0008311"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:22562358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-DNA exonuclease activity","termid":"GO:0008296"},{"relation_name":"is_a","term_name":"double-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0016787","GO:0016788","GO:0003674","GO:0004527","GO:0003824"],"is_obsolete":false,"name":"double-stranded DNA 3'-5' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.2","MetaCyc:3.1.11.2-RXN"],"synonyms":[{"name":"double-stranded DNA 3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"double-stranded DNA specific 3'-5' exodeoxyribonuclease activity","type":"related"},{"name":"exonuclease III activity","type":"narrow"},{"name":"exoribonuclease III activity","type":"narrow"}],"termid":"GO:0008311","terms_by_termid":{"GO:0008311":null}}


id: PBO:0057237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: FYPO:0008232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more microtubule bundles than normal during mitotic M-phase.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundles present in increased numbers","termid":"FYPO:0002401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"microtubule bundles present in increased numbers during mitotic M phase","termid":"FYPO:0008232"}


id: MONDO:1012144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, turkey","secondary_identifiers":["OMIA:000621-9103"],"termid":"MONDO:1012144","xrefs":{"Monarch":{"xref_id":"1012144"}}}


id: GO:0000329
data:
  {"annotated_genes":["SJAG_02289","SJAG_00029","SJAG_01032","SJAG_03137","SJAG_02902","SJAG_00534","SJAG_03313","SJAG_04910","SJAG_05184","SJAG_02029","SJAG_02716","SJAG_07012","SJAG_00638","SJAG_01571","SJAG_00212","SJAG_01078","SJAG_05294","SJAG_01471","SJAG_00821","SJAG_03072","SJAG_02782","SJAG_01320","SJAG_03511","SJAG_00516","SJAG_03089","SJAG_02344","SJAG_03928","SJAG_03656","SJAG_02117","SJAG_03450","SJAG_01400","SJAG_00299","SJAG_04963","SJAG_03895","SJAG_04867","SJAG_02656","SJAG_00824","SJAG_03909","SJAG_01983","SJAG_02665","SJAG_03400","SJAG_00688","SJAG_01299","SJAG_03009","SJAG_00771","SJAG_01145","SJAG_00877","SJAG_04471","SJAG_02356","SJAG_01324","SJAG_01817","SJAG_03667","SJAG_01027","SJAG_01619","SJAG_01236","SJAG_03987","SJAG_00051","SJAG_04725","SJAG_04698","SJAG_03497","SJAG_02699","SJAG_01112","SJAG_01991","SJAG_02103","SJAG_04232","SJAG_04502","SJAG_01803","SJAG_01505","SJAG_02433","SJAG_03355","SJAG_04975","SJAG_01319","SJAG_03848","SJAG_01036","SJAG_03250","SJAG_03138","SJAG_03447","SJAG_00570","SJAG_02414","SJAG_01080","SJAG_02853","SJAG_04506","SJAG_03256","SJAG_02565","SJAG_04015","SJAG_00457","SJAG_02023","SJAG_02231","SJAG_04955","SJAG_01990","SJAG_03406","SJAG_01344","SJAG_03100","SJAG_03725","SJAG_01941","SJAG_04643","SJAG_03403","SJAG_04966","SJAG_04616","SJAG_05210","SJAG_00732","SJAG_03442","SJAG_01509","SJAG_02603","SJAG_03371","SJAG_01783","SJAG_00209","SJAG_03899","SJAG_01795","SJAG_03960","SJAG_01913","SJAG_02578"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63286,69865,70531,70747,70903,71105,71351,72301,72527,72883,72938,73143,73244,73333,73360,73799,74359,74797,75227,75602,76623,76801,78802,78952,79469,79961,80079,80151,80412,80605,80674,88070,88357,88375,89406,89427,89475,89488,90733,91837,92389,93234,93318,93873,94051,94105,94106,94232,94367,94391,94927,94959,95982,96097,96230,96313,96355,96429,96467,96744,97683,97948,98368,98679,98876,99021,99148,99188,99895,100266,100299,100550,101945,102286,103324,103900,104109,104224,105222,105293,105451,106035,106990,106997,107462,107506,107708,108159,108591,108994,109601,109685,110178,110568,110705,112094,113539,113723,113860,114636,114643,115175,116494,116845,116916,117318,117551,117678,117847,117906,118106,118500],"is_not":false,"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a vacuole, the shape of which correlates with cell cycle phase. The membrane separates its contents from the cytoplasm of the cell. An example of this structure is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:krc","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole membrane","termid":"GO:0098852"},{"relation_name":"part_of","term_name":"fungal-type vacuole","termid":"GO:0000324"}],"gene_count":112,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00051":null,"SJAG_00209":null,"SJAG_00212":null,"SJAG_00299":null,"SJAG_00457":null,"SJAG_00516":null,"SJAG_00534":null,"SJAG_00570":null,"SJAG_00638":null,"SJAG_00688":null,"SJAG_00732":null,"SJAG_00771":null,"SJAG_00821":null,"SJAG_00824":null,"SJAG_00877":null,"SJAG_01027":null,"SJAG_01032":null,"SJAG_01036":null,"SJAG_01078":null,"SJAG_01080":null,"SJAG_01112":null,"SJAG_01145":null,"SJAG_01236":null,"SJAG_01299":null,"SJAG_01319":null,"SJAG_01320":null,"SJAG_01324":null,"SJAG_01344":null,"SJAG_01400":null,"SJAG_01471":null,"SJAG_01505":null,"SJAG_01509":null,"SJAG_01571":null,"SJAG_01619":null,"SJAG_01783":null,"SJAG_01795":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01941":null,"SJAG_01983":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_02023":null,"SJAG_02029":null,"SJAG_02103":null,"SJAG_02117":null,"SJAG_02231":null,"SJAG_02289":null,"SJAG_02344":null,"SJAG_02356":null,"SJAG_02414":null,"SJAG_02433":null,"SJAG_02565":null,"SJAG_02578":null,"SJAG_02603":null,"SJAG_02656":null,"SJAG_02665":null,"SJAG_02699":null,"SJAG_02716":null,"SJAG_02782":null,"SJAG_02853":null,"SJAG_02902":null,"SJAG_03009":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03100":null,"SJAG_03137":null,"SJAG_03138":null,"SJAG_03250":null,"SJAG_03256":null,"SJAG_03313":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03400":null,"SJAG_03403":null,"SJAG_03406":null,"SJAG_03442":null,"SJAG_03447":null,"SJAG_03450":null,"SJAG_03497":null,"SJAG_03511":null,"SJAG_03656":null,"SJAG_03667":null,"SJAG_03725":null,"SJAG_03848":null,"SJAG_03895":null,"SJAG_03899":null,"SJAG_03909":null,"SJAG_03928":null,"SJAG_03960":null,"SJAG_03987":null,"SJAG_04015":null,"SJAG_04232":null,"SJAG_04471":null,"SJAG_04502":null,"SJAG_04506":null,"SJAG_04616":null,"SJAG_04643":null,"SJAG_04698":null,"SJAG_04725":null,"SJAG_04867":null,"SJAG_04910":null,"SJAG_04955":null,"SJAG_04963":null,"SJAG_04966":null,"SJAG_04975":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05294":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"fungal-type vacuole membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"fungal-type vacuolar membrane","type":"related"},{"name":"membrane of vacuole with cell cycle-correlated morphology","type":"exact"}],"termid":"GO:0000329","terms_by_termid":{"GO:0000329":null}}


id: GO:0023054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a stretch signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by stretch effect (obsolete GO:0023054)","synonyms":[{"name":"signal initiation by stretch effect","type":"exact"}],"termid":"GO:0023054"}


id: PBO:0075346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS1 intronic transcript 1","termid":"PBO:0075346"}


id: FYPO:0001310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal viability in stationary phase","synonyms":[{"name":"normal cell population viability in stationary phase","type":"exact"},{"name":"normal chronological cell aging","type":"related"},{"name":"normal chronological lifespan","type":"related"}],"termid":"FYPO:0001310"}


id: PBO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"destabilized in the absence of Pcf1","termid":"PBO:0001596"}


id: GO:0032008
data:
  {"annotated_genes":["SJAG_03371","SJAG_00143","SJAG_03089","SJAG_06588","SJAG_03907","SJAG_04496","SJAG_02231","SJAG_05030","SJAG_00561","SJAG_05184","SJAG_02605","SJAG_03405","SJAG_04910","SJAG_00209","SJAG_02424","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69620,73400],"is_not":false,"summary":null,"term":"GO:0032008"},{"annotations":[110851,94657,76628,113166,96431,74398,75788,72888,88651,76237,77143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[91534,98074,107313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03907":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of TOR signaling pathway","type":"narrow"},{"name":"positive regulation of TOR signaling cascade","type":"related"},{"name":"positive regulation of TOR signaling pathway","type":"exact"},{"name":"positive regulation of TOR signalling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signalling pathway","type":"exact"},{"name":"stimulation of TOR signaling pathway","type":"narrow"},{"name":"up regulation of TOR signaling pathway","type":"exact"},{"name":"up-regulation of TOR signaling pathway","type":"exact"},{"name":"upregulation of TOR signaling pathway","type":"exact"}],"termid":"GO:0032008","terms_by_termid":{"GO:0032008":null,"GO:1904263":null,"GO:1904515":null}}


id: MONDO:1012741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Chiari malformation that occurs in dogs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chiari-like malformation, dog","secondary_identifiers":["OMIA:001861-9615"],"synonyms":[{"name":"Arnold Chiari malformation, dog","type":"related"},{"name":"Chiari malformation Type I with syringomyelia, dog","type":"related"},{"name":"caudal occipital malformation syndrome, dog","type":"related"},{"name":"hindbrain herniation, dog","type":"related"},{"name":"occipital hypoplasia, dog","type":"related"}],"termid":"MONDO:1012741","xrefs":{"Monarch":{"xref_id":"1012741"}}}


id: PBO:0083381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps CCT8/YJL008C, a verified gene encoding a subunit of the cytosolic chaperonin Cct ring complex","termid":"PBO:0083381"}


id: MONDO:0004898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary choroidal atrophy","termid":"MONDO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"total circumpapillary dystrophy of choroid","secondary_identifiers":["MEDGEN:509705","UMLS:C0154896","ICD9:363.52","DOID:9842","SCTID:59753003"],"synonyms":[{"name":"circumpapillary dystrophy of choroid, total","type":"exact"}],"termid":"MONDO:0004898","xrefs":{"Monarch":{"xref_id":"0004898"}}}


id: PBO:0091695
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Latrunculin Sensitive Knockout","termid":"PBO:0091695"}


id: PBO:0043177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold inducible RNA binding protein","termid":"PBO:0043177"}


id: MONDO:0019681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sialidosis type 2","termid":"MONDO:0009738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"juvenile sialidosis type 2","secondary_identifiers":["Orphanet:93399","SCTID:111383007","UMLS:C5681598","icd11.foundation:1730484030","GARD:19183","MEDGEN:1825999"],"synonyms":[{"name":"dysmorphic sialidosis, juvenile form","type":"exact"}],"termid":"MONDO:0019681","xrefs":{"Monarch":{"xref_id":"0019681"}}}


id: GO:0060339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"regulation of type I interferon-mediated signaling pathway","termid":"GO:0060338"},{"relation_name":"negatively_regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of type I interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060339"}


id: MONDO:1011941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ancon dwarfism, non-human animal","secondary_identifiers":["OMIA:000302"],"termid":"MONDO:1011941","xrefs":{"Monarch":{"xref_id":"1011941"}}}


id: GO:0052481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont salicylic acid-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway (obsolete GO:0052481)","synonyms":[{"name":"negative modulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"negative modulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont SA-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related symbiont salicylic acid-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052481"}


id: PR:O14022
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation-transporting ATPase 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.19c","synonyms":[{"name":"Spom972h-cta5","type":"exact"}],"termid":"PR:O14022"}


id: GO:2001288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"positively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of caveolin-mediated endocytosis","synonyms":[{"name":"positive regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"positive regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"positive regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001288"}


id: MONDO:0044704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngeal squamous cell carcinoma","termid":"MONDO:0000536"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"oropharynx squamous cell carcinoma","secondary_identifiers":["icd11.foundation:839740136","ONCOTREE:OPHSC","MEDGEN:76094","NCIT:C8181","Orphanet:500478","UMLS:C0280313","GARD:17928"],"synonyms":[{"name":"epidermoid carcinoma of oropharynx","type":"exact"},{"name":"epidermoid carcinoma of the oropharynx","type":"exact"},{"name":"oropharyngeal epidermoid carcinoma","type":"exact"},{"name":"oropharyngeal squamous cell carcinoma","type":"exact"},{"name":"oropharyngeal throat squamous cell cancer","type":"exact"},{"name":"squamous cell carcinoma of oropharynx","type":"exact"},{"name":"squamous cell carcinoma of the oropharynx","type":"related"}],"termid":"MONDO:0044704","xrefs":{"Monarch":{"xref_id":"0044704"}}}


id: MONDO:0004237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare poorly differentiated morphologic variant of large cell lung carcinoma characterized by the presence of rhabdoid cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell carcinoma with rhabdoid phenotype","secondary_identifiers":["NCIT:C6876","MEDGEN:226828","ONCOTREE:RLCLC","UMLS:C1265997","ICDO:8014/3","DOID:7480"],"synonyms":[{"name":"RLCLC","type":"related"},{"name":"large cell carcinoma with rhabdoid phenotype (morphologic abnormality)","type":"exact"},{"name":"large cell lung carcinoma with rhabdoid phenotype","type":"exact"}],"termid":"MONDO:0004237","xrefs":{"Monarch":{"xref_id":"0004237"}}}


id: GO:0016863
data:
  {"annotated_genes":["SJAG_04307","SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000247"},{"annotations":[75058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["EC:5.3.3.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03598":null,"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing C=C bonds","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing C=C bonds","type":"exact"}],"termid":"GO:0016863","terms_by_termid":{"GO:0000247":null,"GO:0004452":null}}


id: PBO:0005795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphatase (predicted)","termid":"PBO:0005795"}


id: PBO:0040297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP2B1 antisense RNA 1","termid":"PBO:0040297"}


id: PBO:0060248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP associated protein","termid":"PBO:0060248"}


id: PBO:0061814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 4 Y-linked","termid":"PBO:0061814"}


id: GO:0070671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-12","synonyms":[{"name":"response to IL-12","type":"exact"}],"termid":"GO:0070671"}


id: PBO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase Plb2","termid":"PBO:0090015"}


id: PBO:0087318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylmethionine-homocysteine methyltransferase; functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio","termid":"PBO:0087318"}


id: PBO:0071566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 32","termid":"PBO:0071566"}


id: PBO:0048651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 2","termid":"PBO:0048651"}


id: SO:0000591
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tertiary structure in RNA where nucleotides in a loop form base pairs with a region of RNA downstream of the loop.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoknot","secondary_identifiers":["http://en.wikipedia.org/wiki/Pseudoknot"],"termid":"SO:0000591"}


id: PBO:0043603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectin subfamily member 12","termid":"PBO:0043603"}


id: SO:0001943
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 4th residue (a lysine), from the start of the H3 histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_3_acetylation_site","termid":"SO:0001973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K4_acetylation_site","synonyms":[{"name":"H3K4 acetylation site","type":"exact"},{"name":"H3K4ac","type":"exact"}],"termid":"SO:0001943"}


id: PBO:0084701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial glycine transporter; required for the transport of glycine into mitochondria for initiation of heme biosynthesis, with YMC1 acting as a secondary transporter; homolog of human SLC25A38, a mitochondrial glycine transporter associated with nonsyndromic autosomal recessive congenital sideroblastic anemia; human SLC25A38 can complement the heme deficiency associated with the null mutant; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0084701"}


id: GO:0000285
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72937],"is_not":false,"summary":null,"term":"GO:0000285"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.150","RHEA:13609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:2.7.1.150-RXN","Reactome:R-HSA-1675910","KEGG_REACTION:R05802","Reactome:R-HSA-1675921","Reactome:R-HSA-1676134","Reactome:R-HSA-1676168"],"synonyms":[{"name":"ATP:1-phosphatidyl-1D-myo-inositol-3-phosphate 5-phosphotransferase activity","type":"related"},{"name":"phosphatidylinositol 3-phosphate 5-kinase activity","type":"related"},{"name":"phosphatidylinositol-3-phosphate 5-kinase activity","type":"exact"},{"name":"type III PIP kinase activity","type":"related"}],"termid":"GO:0000285","terms_by_termid":{"GO:0000285":null}}


id: GO:0009693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene metabolic process","termid":"GO:0009692"},{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene biosynthetic process","secondary_identifiers":["GO:0042456","MetaCyc:ETHYL-PWY"],"synonyms":[{"name":"ethene biosynthesis","type":"exact"},{"name":"ethene biosynthesis from L-methionine","type":"exact"},{"name":"ethene biosynthetic process","type":"exact"},{"name":"ethene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene anabolism","type":"exact"},{"name":"ethylene biosynthesis","type":"exact"},{"name":"ethylene biosynthesis from L-methionine","type":"exact"},{"name":"ethylene biosynthetic process from L-methionine","type":"exact"},{"name":"ethylene formation","type":"exact"},{"name":"ethylene synthesis","type":"exact"}],"termid":"GO:0009693"}


id: MONDO:0003752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the frontal sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of frontal sinus","termid":"MONDO:0021483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinus Schneiderian papilloma","secondary_identifiers":["DOID:6054","UMLS:C1333645","MEDGEN:234273"],"synonyms":[{"name":"Schneiderian papilloma of frontal sinus","type":"related"},{"name":"Schneiderian papilloma of the frontal sinus","type":"exact"},{"name":"frontal sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0003752","xrefs":{"Monarch":{"xref_id":"0003752"}}}


id: PBO:0088430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim16","termid":"PBO:0088430"}


id: PBO:0075560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG11 vesicle trafficking associated, spatacsin","termid":"PBO:0075560"}


id: RO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intercellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intercellular_endoparasite","termid":"RO:0002639"}


id: FYPO:0005796
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which microtubule bundles are shorter than normal and have an abnormal structure. Typically, microtubule bundles do not reach the cell tips and are not aligned parallel to the long axis of the cell.","definition_xrefs":["PMID:11007487","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short microtubule bundle","termid":"FYPO:0005797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"short disorganized microtubule bundle","synonyms":[{"name":"short disorganised microtubule bundle","type":"exact"},{"name":"short disorganized microtubule array","type":"related"},{"name":"short microtubule bundle with abnormal structure","type":"exact"}],"termid":"FYPO:0005796"}


id: PBO:0070097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 11 pseudogene","termid":"PBO:0070097"}


id: GO:0071771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty aldehyde + H+ + 2 NADPH + O2 = a long-chain alkane + formate + H2O + 2 NADP+.","definition_xrefs":["RHEA:21440","PMID:6593720","PMID:8718622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"aldehyde oxygenase (deformylating) activity","secondary_identifiers":["EC:4.1.99.5","MetaCyc:RXN-13262"],"synonyms":[{"name":"aldehyde decarbonylase activity","type":"exact"},{"name":"decarbonylase activity","type":"exact"}],"termid":"GO:0071771"}


id: PBO:0066112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASGRP3 antisense RNA 1","termid":"PBO:0066112"}


id: GO:0009308
data:
  {"annotated_genes":["SJAG_05007","SJAG_01455","SJAG_04546","SJAG_04481","SJAG_04904","SJAG_02505","SJAG_04130","SJAG_03167","SJAG_03288","SJAG_03632","SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77555,73644,74590,79586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[111483],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0170066"},{"annotations":[101093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006595"},{"annotations":[76178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[87750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"},{"annotations":[78160,75194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"},{"annotations":[71062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008216"},{"annotations":[103071,78159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006597"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_03288":null,"SJAG_03632":null,"SJAG_04130":null,"SJAG_04481":null,"SJAG_04546":null,"SJAG_04904":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044106"],"synonyms":[{"name":"amine metabolism","type":"exact"},{"name":"cellular amine metabolic process","type":"exact"}],"termid":"GO:0009308","terms_by_termid":{"GO:0000162":null,"GO:0006595":null,"GO:0006597":null,"GO:0008216":null,"GO:0008295":null,"GO:0009447":null,"GO:0033387":null,"GO:0170066":null}}


id: GO:0106356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADPH + O2 = 3,4-dihydroxybenzoate + H2O + NADP+.","definition_xrefs":["RHEA:19477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase (NADPH) activity","synonyms":[{"name":"4-hydroxybenzoate 3-monooxygenase [NADPH] activity","type":"exact"}],"termid":"GO:0106356"}


id: PBO:0071426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 32","termid":"PBO:0071426"}


id: MONDO:0031481
data:
  {"annotated_genes":["SJAG_05013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86177],"is_not":false,"summary":null,"term":"MONDO:0031481"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"obsolete cerebral malformation with epilepsy (obsolete MONDO:0015655)","termid":"MONDO:0015655"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with microcephaly as major feature (obsolete MONDO:0017119)","termid":"MONDO:0017119"},{"relation_name":"is_a","term_name":"microcephaly, epilepsy, and diabetes syndrome","termid":"MONDO:0100328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05013":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, epilepsy, and diabetes syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614231","GARD:18438","Orphanet:306558"],"synonyms":[{"name":"MEDS1","type":"exact"},{"name":"microcephaly, epilepsy, and diabetes syndrome","type":"broad"},{"name":"primary microcephaly-epilepsy-permanent neonatal diabetes syndrome","type":"exact"}],"termid":"MONDO:0031481","terms_by_termid":{"MONDO:0031481":null},"xrefs":{"Monarch":{"xref_id":"0031481"}}}


id: PBO:0067410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 520, pseudogene","termid":"PBO:0067410"}


id: PATO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000698 floury (obsolete PATO:0000698)","termid":"PATO:0000698"}


id: PBO:0069438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 703, pseudogene","termid":"PBO:0069438"}


id: PBO:0088861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein, protein kinase inhibitor Nif1","termid":"PBO:0088861"}


id: PBO:0075980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 5A","termid":"PBO:0075980"}


id: MONDO:0012492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 3","secondary_identifiers":["UMLS:C1864875","MEDGEN:355315","OMIM:610438"],"synonyms":[{"name":"RLS3","type":"exact"},{"name":"restless legs syndrome 3","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012492","xrefs":{"Monarch":{"xref_id":"0012492"}}}


id: MONDO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polydactyly, preaxial (obsolete MONDO:0000086)","termid":"MONDO:0000086","xrefs":{"Monarch":{"xref_id":"0000086"}}}


id: GO:1990132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of misfolded proteins that are being held by the chaperone heat shock protein (Hsp) and targeting them for destruction by the Ub-proteasome machinery.","definition_xrefs":["GOC:rb","PMID:23530227"],"gene_count":0,"genotype_count":0,"name":"obsolete release of misfolded protein from chaperone (obsolete GO:1990132)","synonyms":[{"name":"release of misfolded protein from chaperone","type":"exact"}],"termid":"GO:1990132"}


id: MONDO:0021107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sleep disorder characterized by a tendency for excessive sleepiness during the day which occurs even after adequate sleep in the nighttime. The persons who suffer from this condition experience fatigue and may fall asleep at inappropriate times during the day.","definition_xrefs":["NCIT:C84489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy","secondary_identifiers":["MEDGEN:45001","UMLS:C0027404","MESH:D009290","DOID:8986","icd11.foundation:1201727099","Orphanet:619284","SCTID:60380001","GARD:22460"],"synonyms":[{"name":"narcolepsy with or without cataplexy","type":"exact"},{"name":"narcolepsy, without cataplexy","type":"narrow"},{"name":"paroxysmal sleep","type":"exact"}],"termid":"MONDO:0021107","xrefs":{"Monarch":{"xref_id":"0021107"}}}


id: FYPO:0000117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal septum assembly","secondary_identifiers":["FYPO:0000170"],"synonyms":[{"name":"abnormal division septum assembly","type":"exact"},{"name":"abnormal division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal septation","type":"broad"},{"name":"abnormal septum assembly during mitotic cell cycle","type":"related"},{"name":"abnormal septum assembly during vegetative growth","type":"exact"},{"name":"septation defects","type":"broad"},{"name":"septum formation: abnormal","type":"related"}],"termid":"FYPO:0000117"}


id: GO:0018738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-formylglutathione + H2O = formate + glutathione + H+.","definition_xrefs":["EC:3.1.2.12","RHEA:14961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"S-formylglutathione hydrolase activity","secondary_identifiers":["Reactome:R-HSA-5693724","UM-BBD_reactionID:r0241","KEGG_REACTION:R00527","MetaCyc:S-FORMYLGLUTATHIONE-HYDROLASE-RXN"],"termid":"GO:0018738"}


id: PBO:0087490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cytochrome C oxidase complex; stabilizes or regulates formation of respiratory chain supercomplexes composed of Complex III (ubiquinol-cytochrome c reductase) and Complex IV (cytochrome c oxidase)","termid":"PBO:0087490"}


id: PBO:0055884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit B","termid":"PBO:0055884"}


id: PBO:0064912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 1","termid":"PBO:0064912"}


id: PBO:0083411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YOL085C","termid":"PBO:0083411"}


id: MONDO:0011696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uveal melanoma","termid":"MONDO:0006486"},{"relation_name":"is_a","term_name":"susceptibility to uveal melanoma","termid":"MONDO:0007966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, uveal, susceptibility to, 2","secondary_identifiers":["MEDGEN:339826","OMIM:606661","UMLS:C1847723"],"synonyms":[{"name":"UVM2","type":"exact"},{"name":"melanoma, uveal, susceptibility to, 2","type":"exact"},{"name":"melanoma, uveal, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0011696","xrefs":{"Monarch":{"xref_id":"0011696"}}}


id: GO:0034755
data:
  {"annotated_genes":["SJAG_04737","SJAG_04260","SJAG_02457","SJAG_04867","SJAG_01007","SJAG_02473","SJAG_02968","SJAG_04675"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61547,76172,78263],"is_not":false,"summary":null,"term":"GO:0034755"},{"annotations":[114095,98406,70567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[113518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[89615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"}]},"cv_name":"biological_process","definition":"A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","PMID:11390404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02968":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04737":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"iron ion transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006827","GO:0061839","GO:1903874","GO:0000040"],"synonyms":[{"name":"ferrous ion transmembrane transport","type":"narrow"},{"name":"ferrous iron transmembrane transport","type":"narrow"},{"name":"high affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high affinity iron ion transport","type":"narrow"},{"name":"high-affinity ferrous ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transmembrane transport","type":"narrow"},{"name":"high-affinity iron ion transport","type":"narrow"},{"name":"iron ion membrane transport","type":"exact"},{"name":"iron(2+) transmembrane transport","type":"narrow"},{"name":"low affinity iron ion transport","type":"narrow"},{"name":"low-affinity iron ion transmembrane transport","type":"narrow"},{"name":"low-affinity iron ion transport","type":"narrow"},{"name":"transmembrane iron transport","type":"exact"}],"termid":"GO:0034755","terms_by_termid":{"GO:0034755":null,"GO:0048250":null,"GO:0098711":null,"GO:0140466":null}}


id: PBO:0000912
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inferred from genetic map position","termid":"PBO:0000912"}


id: PBO:0029576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_DEM","termid":"PBO:0029576"}


id: GO:0005960
data:
  {"annotated_genes":["SJAG_03861","SJAG_02901","SJAG_03641","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57726,74552,78320,87762],"is_not":false,"summary":null,"term":"GO:0005960"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glycine cleavage complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glycine_decarboxylase_complex","GO:0070015","GO:0005961"],"synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine decarboxylase complex","type":"exact"},{"name":"glycine dehydrogenase (decarboxylating) complex","type":"exact"},{"name":"glycine dehydrogenase complex (decarboxylating)","type":"related"},{"name":"glycine synthase complex","type":"exact"}],"termid":"GO:0005960","terms_by_termid":{"GO:0005960":null}}


id: SO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Yeast Artificial Chromosome, a vector constructed from the telomeric, centromeric, and replication origin sequences needed for replication in yeast cells.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAC","synonyms":[{"name":"yeast artificial chromosome","type":"exact"}],"termid":"SO:0000152"}


id: MONDO:0019918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 21","secondary_identifiers":["Orphanet:96187","GARD:19337","MEDGEN:1673526","UMLS:C5190523","icd11.foundation:553200266"],"synonyms":[{"name":"UPD(21)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 21","type":"exact"}],"termid":"MONDO:0019918","xrefs":{"Monarch":{"xref_id":"0019918"}}}


id: MONDO:0009676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2B (LGMD2B) is a subtype of autosomal recessive limb-girdle muscular dystrophy characterized by an onset in late adolescence or early adulthood of slowly progressive, proximal weakness and atrophy of shoulder and pelvic girdle muscles. Cardiac and respiratory muscles are not involved. Hypertrophy of the calf muscles and highly elevated serum creatine kinase levels are frequently observed.","definition_xrefs":["Orphanet:268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of dysferlin","termid":"MONDO:0016145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2B","secondary_identifiers":["MESH:C535899","MEDGEN:338149","SCTID:718179003","GARD:8574","OMIM:253601","NCIT:C142080","UMLS:C1850889","DOID:0110276"],"synonyms":[{"name":"DYSF autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"LGMD2B","type":"exact"},{"name":"LGMD3","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in DYSF","type":"exact"},{"name":"limb-girdle muscular dystrophy due to dysferlin deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2B","type":"exact"},{"name":"limb-girdle muscular dystrophy type 3","type":"exact"},{"name":"limb-girdle muscular dystrophy, type 2B","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 2","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2B","type":"related"},{"name":"muscular dystrophy, limb-girdle, type 3","type":"related"}],"termid":"MONDO:0009676","xrefs":{"Monarch":{"xref_id":"0009676"}}}


id: PBO:0090351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-lactate dehydrogenase, cytochrome Dld2","termid":"PBO:0090351"}


id: PBO:0062504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 5","termid":"PBO:0062504"}


id: PBO:0030436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA-Asp_C38_methylation","termid":"PBO:0030436"}


id: GO:1900919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octadecene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of octadecene metabolic process","termid":"GO:1900917"},{"relation_name":"positively_regulates","term_name":"octadecene metabolic process","termid":"GO:1900681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of octadecene metabolic process","synonyms":[{"name":"activation of octadecene metabolic process","type":"narrow"},{"name":"activation of octadecene metabolism","type":"narrow"},{"name":"positive regulation of octadecene metabolism","type":"related"},{"name":"up regulation of octadecene metabolic process","type":"exact"},{"name":"up regulation of octadecene metabolism","type":"related"},{"name":"up-regulation of octadecene metabolic process","type":"exact"},{"name":"up-regulation of octadecene metabolism","type":"related"},{"name":"upregulation of octadecene metabolic process","type":"exact"},{"name":"upregulation of octadecene metabolism","type":"related"}],"termid":"GO:1900919"}


id: GO:0071939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of vitamin A from outside of a cell, across the plasma membrane and into the cytosol. Vitamin A is any of several retinoid derivatives of beta-carotene, primarily retinol, retinal, or retinoic acid.","definition_xrefs":["GOC:mah","PMID:16011460","PMID:1924551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"vitamin A transport","termid":"GO:0071938"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"},{"relation_name":"is_a","term_name":"lipid import into cell","termid":"GO:0140354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"vitamin A import into cell","synonyms":[{"name":"vitamin A import","type":"related"},{"name":"vitamin A uptake","type":"exact"}],"termid":"GO:0071939"}


id: GO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of oxalic acid, ethanedioic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxalate transport","termid":"GO:0019532"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oxalic acid secretion","synonyms":[{"name":"oxalate secretion","type":"exact"}],"termid":"GO:0046724"}


id: MONDO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in a pre-existing pleomorphic adenoma. It most often occurs in the parotid gland and less often in the submandibular gland and minor salivary gland. Patients usually present with a history of a long-standing mass which recently had undergone rapid growth. The prognosis depends on the invasiveness of the malignant component. Patients with non-invasive or minimally invasive tumors usually have a good prognosis following surgical resection. Invasive tumors are usually aggressive and are associated with recurrences and metastases.","definition_xrefs":["NCIT:C4397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoepithelial tumor","termid":"MONDO:0002380"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma ex pleomorphic adenoma","secondary_identifiers":["MEDGEN:87486","ICDO:8941/3","UMLS:C0344460"],"synonyms":[{"name":"carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"carcinoma ex pleomorphic adenoma (morphologic abnormality)","type":"exact"},{"name":"carcinoma in pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0002472","xrefs":{"Monarch":{"xref_id":"0002472"}}}


id: PR:Q10191
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein LTV1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01197","PANTHER:PTHR21531:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein LTV1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.17","secondary_identifiers":["UniProtKB:Q10191"],"synonyms":[{"name":"Spom972h-LTV1","type":"exact"}],"termid":"PR:Q10191"}


id: PBO:0065026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 4","termid":"PBO:0065026"}


id: GO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"},{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"part_of","term_name":"mitochondrial transport","termid":"GO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability","synonyms":[{"name":"regulation of mitochondrial envelope permeability","type":"related"},{"name":"regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0046902"}


id: PBO:0034207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intercellular_endoparasite_of","termid":"PBO:0034207"}


id: GO:0060763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic growth of the large, club-shaped terminal end of a mammary gland duct during prepubertal growth and during puberty.","definition_xrefs":["PMID:10804170","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary duct terminal end bud growth","termid":"GO:0060763"}


id: GO:0014806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle hyperplasia","termid":"GO:0014806"}


id: PBO:0111342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex histone deacetylase (class II) subunit, Clr3","termid":"PBO:0111342"}


id: PBO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 12","termid":"PBO:0052242"}


id: PBO:0027691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_during_vegetative_growth","termid":"PBO:0027691"}


id: FYPO:0003708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a normal proportion of cells in the population undergoes conjugation with wild type h+ cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal conjugation frequency","termid":"FYPO:0003797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000257"],"is_obsolete":false,"name":"normal frequency of conjugation with h+ cells","synonyms":[{"name":"normal conjugation with WT h+ cells","type":"exact"},{"name":"normal frequency of conjugation with h plus cells","type":"exact"},{"name":"normal frequency of mating with h+ cells","type":"exact"}],"termid":"FYPO:0003708"}


id: GO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactosylceramides, Gal-beta-(1->4)-Glc-beta(1->1') ceramides, any compound formed by the replacement of the glycosidic C1 hydroxyl group of lactose by a ceramide group. They are the precursors of both gangliosides and globosides.","definition_xrefs":["ISBN:0198506732","ISBN:0471586501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"lactosylceramide metabolic process","termid":"GO:0046478"},{"relation_name":"is_a","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lactosylceramide biosynthetic process","synonyms":[{"name":"lactosylceramide anabolism","type":"exact"},{"name":"lactosylceramide biosynthesis","type":"exact"},{"name":"lactosylceramide formation","type":"exact"},{"name":"lactosylceramide synthesis","type":"exact"}],"termid":"GO:0001572"}


id: PBO:0079218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 3","termid":"PBO:0079218"}


id: PBO:0003449
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.71","termid":"PBO:0003449"}


id: FYECO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an echinocandin class of drug was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ echinocandin","termid":"FYECO:0000391"}


id: PBO:0069384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 644, pseudogene","termid":"PBO:0069384"}


id: PBO:0028217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_chromosome_segregation,_with_binucleate_and_anucleate_compartment_formation_during_cellular_response_to_salt_stress","termid":"PBO:0028217"}


id: PBO:0050981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 43","termid":"PBO:0050981"}


id: FYPO:0001201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to calcium ion starvation","synonyms":[{"name":"decreased growth during cellular response to calcium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to calcium ion starvation","type":"exact"},{"name":"hypersensitive to calcium ion starvation","type":"exact"},{"name":"reduced growth in low calcium","type":"related"},{"name":"sensitive to calcium ion depletion","type":"exact"},{"name":"sensitive to calcium ion deprivation","type":"exact"},{"name":"sensitive to calcium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to calcium starvation","type":"exact"}],"termid":"FYPO:0001201"}


id: MONDO:0007731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HLA modifier (obsolete MONDO:0007731)","secondary_identifiers":["OMIM:142770"],"synonyms":[{"name":"HLA modifier","type":"related"}],"termid":"MONDO:0007731","xrefs":{"Monarch":{"xref_id":"0007731"}}}


id: GO:0141163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cAMP/PKA signal transduction.","definition_xrefs":["PMID:21585352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cAMP/PKA signal transduction","termid":"GO:0141161"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cAMP/PKA signal transduction","termid":"GO:0141156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cAMP/PKA signal transduction","synonyms":[{"name":"positive regulation of cAMP/PKA signaling","type":"exact"}],"termid":"GO:0141163"}


id: PBO:0063042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase domain containing paladin 1","termid":"PBO:0063042"}


id: GO:1903297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hypoxia-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hypoxia-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of hypoxia-induced apoptosis","type":"related"},{"name":"regulation of hypoxic stress-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to hypoxia","type":"exact"}],"termid":"GO:1903297"}


id: PBO:0089469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication ATPase Mgs1","termid":"PBO:0089469"}


id: PBO:0025448
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-Acetylglutamate Synthetase deficiency","termid":"PBO:0025448"}


id: MONDO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the pulmonary artery or one of its branches by an embolus, sometimes associated with infarction of the lung.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary embolism","secondary_identifiers":["MESH:D011655","ICD9:415.19","DOID:9477","SCTID:59282003","EFO:0003827","UMLS:C0034065","HP:0002204","NCIT:C50713","MEDGEN:11027"],"synonyms":[{"name":"embolism, pulmonary","type":"exact"},{"name":"pulmonary artery embolism","type":"exact"},{"name":"pulmonary embolism","type":"exact"},{"name":"pulmonary embolism (disease)","type":"exact"},{"name":"pulmonary embolus","type":"exact"}],"termid":"MONDO:0005279","xrefs":{"Monarch":{"xref_id":"0005279"}}}


id: PBO:0050498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B8","termid":"PBO:0050498"}


id: GO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of uridine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["ISBN:155581073X","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"wobble position uridine ribose methylation","termid":"GO:0002132"}


id: PR:O94596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.06c gene.","definition_xrefs":["UniProtKB:O94596","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.06c","synonyms":[{"name":"Spom972h-SPCC622.06c","type":"exact"}],"termid":"PR:O94596"}


id: MONDO:0006452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually aggressive, primary thymic carcinoma, characterized by the presence of tumor cells morphologically resembling soft tissue sarcoma.","definition_xrefs":["NCIT:C6463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thymus squamous cell carcinoma","termid":"MONDO:0003493"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"thymic sarcomatoid carcinoma","secondary_identifiers":["DOID:8138","MEDGEN:234772","EFO:1000577","UMLS:C1335924"],"synonyms":[{"name":"Thymus sarcomatoid carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma of Thymus","type":"exact"},{"name":"sarcomatoid carcinoma of the Thymus","type":"exact"},{"name":"thymic carcinosarcoma","type":"exact"},{"name":"thymic sarcomatoid carcinoma","type":"exact"},{"name":"thymic spindle cell carcinoma","type":"exact"},{"name":"thymus sarcomatoid carcinoma","type":"exact"}],"termid":"MONDO:0006452","xrefs":{"Monarch":{"xref_id":"0006452"}}}


id: PBO:0000176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3","termid":"PBO:0000176"}


id: MONDO:0020014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with odontological manifestation (obsolete MONDO:0020014)","secondary_identifiers":["Orphanet:98027"],"termid":"MONDO:0020014","xrefs":{"Monarch":{"xref_id":"0020014"}}}


id: GO:0002870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy in T cells, a state of functional inactivation which is part of T cell tolerance induction.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte anergy","termid":"GO:0002249"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell anergy","synonyms":[{"name":"T lymphocyte anergy","type":"exact"},{"name":"T-cell anergy","type":"exact"},{"name":"T-lymphocyte anergy","type":"exact"}],"termid":"GO:0002870"}


id: PBO:0069222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 477, pseudogene","termid":"PBO:0069222"}


id: GO:1903370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of foraging behavior.","definition_xrefs":["GOC:mr","GOC:TermGenie","PMID:8677262","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of foraging behavior","termid":"GO:1903368"},{"relation_name":"positively_regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of foraging behavior","synonyms":[{"name":"activation of foraging behavior","type":"narrow"},{"name":"up regulation of foraging behavior","type":"exact"},{"name":"up-regulation of foraging behavior","type":"exact"},{"name":"upregulation of foraging behavior","type":"exact"}],"termid":"GO:1903370"}


id: PBO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 9","termid":"PBO:0070830"}


id: GO:0004997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with thyrotropin-releasing hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"thyrotropin-releasing hormone receptor activity","termid":"GO:0004997"}


id: PBO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase (predicted)","termid":"PBO:0005681"}


id: PBO:0080552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 11","termid":"PBO:0080552"}


id: GO:0000390
data:
  {"annotated_genes":["SJAG_00206","SJAG_03301","SJAG_00597","SJAG_05025","SJAG_02560"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57266,75303,78898,88119,104835],"is_not":false,"summary":null,"term":"GO:0000390"}]},"cv_name":"biological_process","definition":"Disassembly of a spliceosomal complex with the ATP-dependent release of the product RNAs, one of which is composed of the joined exons. In cis splicing, the other product is the excised sequence, often a single intron, in a lariat structure.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex disassembly","termid":"GO:0032988"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00597":null,"SJAG_02560":null,"SJAG_03301":null,"SJAG_05025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"spliceosomal complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000391","GO:0000392"],"synonyms":[{"name":"U12-type spliceosome disassembly","type":"narrow"},{"name":"U2-type spliceosome disassembly","type":"narrow"},{"name":"spliceosome complex disassembly","type":"exact"},{"name":"spliceosome disassembly","type":"broad"}],"termid":"GO:0000390","terms_by_termid":{"GO:0000390":null}}


id: SO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:022"],"synonyms":[{"name":"2'-O-methylcytidine","type":"exact"},{"name":"Cm","type":"exact"},{"name":"two prime O methylcytidine","type":"exact"}],"termid":"SO:0001283"}


id: PBO:0088536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20","termid":"PBO:0088536"}


id: PBO:0054529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1929","termid":"PBO:0054529"}


id: MONDO:1012331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laminitis, non-human animal","termid":"MONDO:1011767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminitis, cattle","secondary_identifiers":["OMIA:001225-9913"],"termid":"MONDO:1012331","xrefs":{"Monarch":{"xref_id":"1012331"}}}


id: GO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle tissue development","termid":"GO:0016202"}


id: GO:0023056
data:
  {"annotated_genes":["SJAG_01837","SJAG_00610","SJAG_00318","SJAG_04496","SJAG_03405","SJAG_02605","SJAG_03453","SJAG_02135","SJAG_05030","SJAG_02945","SJAG_02486","SJAG_03907","SJAG_03371","SJAG_06621","SJAG_06588","SJAG_01978","SJAG_02231","SJAG_03705","SJAG_00209","SJAG_00027","SJAG_02183","SJAG_01199","SJAG_01587","SJAG_00424","SJAG_01181","SJAG_06622","SJAG_00082","SJAG_01150","SJAG_00143","SJAG_03969","SJAG_04666","SJAG_04259","SJAG_03903","SJAG_00561","SJAG_00781","SJAG_05184","SJAG_00845","SJAG_06592","SJAG_03936","SJAG_04776","SJAG_03048","SJAG_04551","SJAG_01787","SJAG_02424","SJAG_03089","SJAG_01805","SJAG_00457","SJAG_04910","SJAG_03828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111290,102464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[103159,88425,91107,92758,89778,118206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[114090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[116973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[109253,95592,109254,112787,109257,109256,109258,109252,112129,117669,109255,118581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[88484,114927,115888,104020,91188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[94148,110835,102702,87878,90343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[78723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[73400,69620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[74398,76237,77143,72888,76628,75788,94657,96431,113166,88651,110851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[91534,98074,107313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of a signaling process.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"signaling","termid":"GO:0023052"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_04259":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of signaling","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of signaling process","type":"related"},{"name":"positive regulation of signalling process","type":"exact"}],"termid":"GO:0023056","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900745":null,"GO:1903139":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null}}


id: PBO:0043984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 1 receptor","termid":"PBO:0043984"}


id: PBO:0072111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14","termid":"PBO:0072111"}


id: GO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"molybdopterin cofactor binding","synonyms":[{"name":"Moco binding","type":"exact"}],"termid":"GO:0043546"}


id: PBO:0079099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 12-1","termid":"PBO:0079099"}


id: PBO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase (predicted)","termid":"PBO:0005081"}


id: FYPO:0003330
data:
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id: MONDO:0044265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tooth size (obsolete MONDO:0044265)","secondary_identifiers":["OMIM:314240"],"synonyms":[{"name":"tooth size","type":"related"}],"termid":"MONDO:0044265","xrefs":{"Monarch":{"xref_id":"0044265"}}}


id: PBO:0003537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. pombe ura5 mutant","termid":"PBO:0003537"}


id: GO:0052167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host innate immune response","secondary_identifiers":["GO:0052306"],"synonyms":[{"name":"modulation by organism of innate immune response in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host innate immunity","type":"exact"},{"name":"modulation of host innate immune response","type":"exact"},{"name":"perturbation of host innate immune response","type":"exact"}],"termid":"GO:0052167"}


id: FYPO:0003519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylcysteine sulfoxide level","termid":"FYPO:0003522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"increased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"increased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0003519"}


id: PBO:0069679
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 956, pseudogene","termid":"PBO:0069679"}


id: MONDO:0000732
data:
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mitochondrial oxidative phosphorylation disorder in which multiple mitochondrial respiratory chain complexes are affected.","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation 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oxidative phosphorylation 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id: PBO:0051159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-38-3 (non-functional)","termid":"PBO:0051159"}


id: PBO:0054488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1888","termid":"PBO:0054488"}


id: PBO:0073688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 1","termid":"PBO:0073688"}


id: GO:0071197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the Kv alpha subunits 4.2 and 4.3.","definition_xrefs":["PMID:15356203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"Kv4.2-Kv4.3 channel complex","secondary_identifiers":["CORUM:609"],"termid":"GO:0071197"}


id: PBO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin involved in translation initiation (predicted)","termid":"PBO:0005085"}


id: PBO:0012592
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPT1","termid":"PBO:0012592"}


id: MONDO:0013235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the BRCA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"BRCA2-related cancer predisposition","termid":"MONDO:0700269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 2","secondary_identifiers":["OMIM:613347","UMLS:C3150546","MEDGEN:461896"],"synonyms":[{"name":"BRCA2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca2","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in BRCA2","type":"exact"},{"name":"pancreatic cancer 2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to pancreatic cancer 2","type":"related"}],"termid":"MONDO:0013235","xrefs":{"Monarch":{"xref_id":"0013235"}}}


id: PBO:0080090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 51","termid":"PBO:0080090"}


id: GO:0046170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanol metabolic process","termid":"GO:0015945"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"methanol catabolic process","synonyms":[{"name":"methanol breakdown","type":"exact"},{"name":"methanol catabolism","type":"exact"},{"name":"methanol degradation","type":"exact"}],"termid":"GO:0046170"}


id: GO:1901831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving all-trans-neoxanthin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00388","GOC:yaf","MetaCyc:PWY-6809","PMID:11029576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"all-trans-neoxanthin metabolic process","synonyms":[{"name":"all-trans-neoxanthin metabolism","type":"exact"},{"name":"neoxanthin metabolic process","type":"exact"},{"name":"neoxanthin metabolism","type":"exact"}],"termid":"GO:1901831"}


id: PBO:0082953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic pre-60S factor; required for the correct recycling of shuttling factors Alb1, Arx1 and Tif6 at the end of the ribosomal large subunit biogenesis; involved in bud growth in the mitotic signaling network","termid":"PBO:0082953"}


id: GO:0019206
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  {"annotated_genes":["SJAG_01070","SJAG_04693","SJAG_00533","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004001"},{"annotations":[115221,93314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043771"},{"annotations":[113395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034317"},{"annotations":[93315,79219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_01070":null,"SJAG_03708":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"nucleoside kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110138","Reactome:R-HSA-73599","Reactome:R-HSA-73598","Reactome:R-HSA-109759","Reactome:R-HSA-73632","Reactome:R-HSA-109671","Reactome:R-HSA-110137","Reactome:R-HSA-109903"],"termid":"GO:0019206","terms_by_termid":{"GO:0004001":null,"GO:0004849":null,"GO:0034317":null,"GO:0043771":null}}


id: PBO:0085940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mutant is defective in directing meiotic recombination events to homologous chromatids; the authentic, non-tagged protein is detected in highly purified mitochondria and is phosphorylated","termid":"PBO:0085940"}


id: PBO:0075999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STING1 ER exit protein 1","termid":"PBO:0075999"}


id: GO:0052002
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of substance in host (obsolete GO:0052002)","termid":"GO:0052002"}


id: GO:1905643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA methylation.","definition_xrefs":["GOC:bc","GOC:PARL","GOC:TermGenie","PMID:27336847","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA methylation (obsolete GO:1905643)","synonyms":[{"name":"activation of DNA methylation","type":"narrow"},{"name":"up regulation of DNA methylation","type":"exact"},{"name":"up-regulation of DNA methylation","type":"exact"},{"name":"upregulation of DNA methylation","type":"exact"}],"termid":"GO:1905643"}


id: PBO:0060708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 5","termid":"PBO:0060708"}


id: GO:0030782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (S)-7,8,13,14-tetrahydroprotoberberine = S-adenosyl-L-homocysteine + cis-N-methyl-(S)-7,8,13,14-tetrahydroprotoberberine.","definition_xrefs":["EC:2.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(S)-tetrahydroprotoberberine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.122-RXN","RHEA:12805"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-7,8,13,14-tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"},{"name":"tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"}],"termid":"GO:0030782"}


id: GO:0097665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Mdm30 in S. cerevisiae.","definition_xrefs":["GOC:vw","GOC:jd","PMID:14747994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Mdm30 ubiquitin ligase complex","termid":"GO:0097665"}


id: PBO:0039050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with FG repeats 2","termid":"PBO:0039050"}


id: MONDO:0019628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rieger's anomaly is a congenital ocular defect caused by anterior segment dysgenesis and is characterized by severe anterior chamber deformity with prominent strands and marked atrophy of the iris stroma, with hole or pseudo-hole formation and corectopia. The term covers the association of these iris and pupil anomalies with the features of AxenfeldBs anomaly.","definition_xrefs":["Orphanet:91483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Rieger anomaly","secondary_identifiers":["MedDRA:10059198","GARD:16482","MEDGEN:78558","UMLS:C0265341"],"termid":"MONDO:0019628","xrefs":{"Monarch":{"xref_id":"0019628"}}}


id: MONDO:0014323
data:
  {"annotated_genes":["SJAG_04296","SJAG_02955","SJAG_04637","SJAG_02946","SJAG_05342","SJAG_02150","SJAG_01998","SJAG_02947","SJAG_03827"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86942,86943,86944,86945,86946,86947,86948,86949,86950],"is_not":false,"summary":null,"term":"MONDO:0014323"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the SLC7A14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01998":null,"SJAG_02150":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03827":null,"SJAG_04296":null,"SJAG_04637":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 68","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615725","UMLS:C3810380","GARD:16004","MEDGEN:816710","DOID:0110374","ICD10CM:H35.5"],"synonyms":[{"name":"RP68","type":"exact"},{"name":"SLC7A14 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 68","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in SLC7A14","type":"exact"},{"name":"retinitis pigmentosa type 68","type":"exact"}],"termid":"MONDO:0014323","terms_by_termid":{"MONDO:0014323":null},"xrefs":{"Monarch":{"xref_id":"0014323"}}}


id: PBO:0051989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAKMIP1 divergent transcript","termid":"PBO:0051989"}


id: PBO:0044480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 24 subfamily A member 1","termid":"PBO:0044480"}


id: GO:0001893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maternally driven process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.","definition_xrefs":["GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"maternal process involved in female pregnancy","termid":"GO:0060135"},{"relation_name":"part_of","term_name":"placenta development","termid":"GO:0001890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal placenta development","synonyms":[{"name":"decidua development","type":"related"}],"termid":"GO:0001893"}


id: MONDO:0043005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of multiple congenital anomalies/dysmorphic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome (obsolete MONDO:0043005)","secondary_identifiers":["Orphanet:183533"],"synonyms":[{"name":"hereditary multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0043005","xrefs":{"Monarch":{"xref_id":"0043005"}}}


id: GO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the ureter gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072199"}


id: GO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell.","definition_xrefs":["GOC:sl","PMID:18267954","PMID:16151017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation","synonyms":[{"name":"VSMC differentiation","type":"exact"},{"name":"vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035886"}


id: GO:0043739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolyzes mismatched double-stranded DNA and polynucleotides, releasing free uracil and leaving an apyrimidinic (AP) site.","definition_xrefs":["PMID:24739389","EC:3.2.2.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil DNA N-glycosylase activity","termid":"GO:0004844"},{"relation_name":"is_a","term_name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","termid":"GO:0008263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798","GO:0140097"],"is_obsolete":false,"name":"G/U mismatch-specific uracil-DNA glycosylase activity","synonyms":[{"name":"GU mismatch-specific uracil-DNA glycosylase activity","type":"exact"},{"name":"MUG","type":"exact"},{"name":"uracil mismatch repair protein","type":"broad"}],"termid":"GO:0043739"}


id: PR:Q9UUC7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctu2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUC7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.13c","synonyms":[{"name":"Spom972h-ctu2","type":"exact"}],"termid":"PR:Q9UUC7"}


id: PBO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing defective protein Sde2","termid":"PBO:0001846"}


id: GO:2000926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellodextrin metabolic process","termid":"GO:2000924"},{"relation_name":"positively_regulates","term_name":"cellodextrin metabolic process","termid":"GO:2000889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellodextrin metabolic process","synonyms":[{"name":"positive regulation of cellodextrin metabolism","type":"exact"}],"termid":"GO:2000926"}


id: MONDO:0003979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucinous cystic neoplasm that arises from the intrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct cystadenoma","termid":"MONDO:0003420"},{"relation_name":"is_a","term_name":"intrahepatic bile duct adenoma","termid":"MONDO:0003444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic bile duct cystadenoma","secondary_identifiers":["NCIT:C96835","MEDGEN:235226","DOID:6733","UMLS:C1334257"],"synonyms":[{"name":"cystadenoma of the intrahepatic bile duct","type":"exact"},{"name":"intrahepatic bile duct cystadenoma","type":"exact"},{"name":"intrahepatic bile duct mucinous cystic neoplasm","type":"exact"}],"termid":"MONDO:0003979","xrefs":{"Monarch":{"xref_id":"0003979"}}}


id: MONDO:0020768
data:
  {"annotated_genes":["SJAG_03811","SJAG_02016","SJAG_04882"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85738,85737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010577"},{"annotations":[87527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02016":null,"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:304500"],"synonyms":[{"name":"DFNX","type":"exact"},{"name":"X-linked deafness","type":"exact"},{"name":"deafness, X-linked","type":"exact"},{"name":"deafness, X-linked, DFN","type":"exact"}],"termid":"MONDO:0020768","terms_by_termid":{"MONDO:0010378":null,"MONDO:0010577":null},"xrefs":{"Monarch":{"xref_id":"0020768"}}}


id: PBO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(22)(q12.2)","termid":"PBO:0047959"}


id: MONDO:0000462
data:
  {"annotated_genes":["SJAG_01471","SJAG_04003","SJAG_03457","SJAG_00212","SJAG_03453","SJAG_04601","SJAG_00516","SJAG_00120","SJAG_00660","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87583,87582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[87430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[85518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[87165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[87164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[86349,86350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[87117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[86236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[85975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"},{"annotations":[86978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A disease involving the ocular adnexa.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region","termid":"MONDO:0002022"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03453":null,"SJAG_03457":null,"SJAG_04003":null,"SJAG_04601":null},"genotype_count":0,"is_obsolete":false,"name":"eye adnexa disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009546","MEDGEN:713201","DOID:0050815","ICD10WHO:H00-H06","SCTID:118941004","UMLS:C1290855"],"synonyms":[{"name":"disease of ocular adnexa","type":"exact"},{"name":"disease or disorder of ocular adnexa","type":"exact"},{"name":"disorder of ocular adnexa","type":"exact"},{"name":"ocular adnexa disease","type":"exact"},{"name":"ocular adnexa disease or disorder","type":"exact"}],"termid":"MONDO:0000462","terms_by_termid":{"MONDO:0008097":null,"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0010912":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null,"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0000462"}}}


id: PBO:0034409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification_(obsolete_requires_modification)","termid":"PBO:0034409"}


id: GO:0051179
data:
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id: GO:0047024
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-alpha-androstane-3-beta,17-beta-diol + NADP+ = 17-beta-hydroxy-5-alpha-androstan-3-one + H+ + NADPH.","definition_xrefs":["RHEA:16297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R04344","EC:1.1.1.210","MetaCyc:1.1.1.210-RXN"],"synonyms":[{"name":"3-beta(or 20-alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3-beta-HSD activity","type":"related"},{"name":"3beta(or 20alpha)-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"3beta(or 20alpha)-hydroxysteroid:NADP+ oxidoreductase activity","type":"broad"},{"name":"3beta,20alpha-hydroxysteroid oxidoreductase activity","type":"broad"},{"name":"5alpha-androstane-3beta,17beta-diol dehydrogenase activity","type":"exact"},{"name":"dehydrogenase, 3beta,20alpha-hydroxy steroid","type":"broad"},{"name":"progesterone reductase activity","type":"related"}],"termid":"GO:0047024"}


id: GO:0097436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into dormancy","synonyms":[{"name":"induction of dormancy","type":"exact"}],"termid":"GO:0097436"}


id: MONDO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4M1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 50","secondary_identifiers":["MESH:C567858","OMIM:612936","UMLS:C2752008","DOID:0110802","NORD:1989","MEDGEN:442869","GARD:15592"],"synonyms":[{"name":"AP4M1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG50","type":"exact"},{"name":"Spastic Paraplegia 50","type":"exact"},{"name":"autosomal recessive spastic paraplegia 50","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 3","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 3, formerly","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in AP4M1","type":"exact"},{"name":"hereditary spastic paraplegia type 50","type":"exact"},{"name":"spastic paraplegia 50, autosomal recessive","type":"related"}],"termid":"MONDO:0013048","xrefs":{"Monarch":{"xref_id":"0013048"}}}


id: GO:0014072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to isoquinoline alkaloid","termid":"GO:0014072"}


id: PBO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (predicted)","termid":"PBO:0002085"}


id: PBO:0066040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 9","termid":"PBO:0066040"}


id: PBO:0017519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba3","termid":"PBO:0017519"}


id: PBO:0053744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 971","termid":"PBO:0053744"}


id: PBO:0018116
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukarotes only","termid":"PBO:0018116"}


id: PR:O42923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding post-transcriptional regulator cip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.18","synonyms":[{"name":"Spom972h-cip1","type":"exact"},{"name":"csx1-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42923"}


id: PBO:0081121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAT antisense RNA 1","termid":"PBO:0081121"}


id: PBO:0004936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop16 (predicted)","termid":"PBO:0004936"}


id: PBO:0091306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2","termid":"PBO:0091306"}


id: MONDO:0045013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the extraembryonic membrane.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of extraembryonic membrane","secondary_identifiers":["UMLS:C3662139","SCTID:609522002","MEDGEN:783294"],"synonyms":[{"name":"disease of extraembryonic membrane","type":"exact"},{"name":"disease or disorder of extraembryonic membrane","type":"exact"},{"name":"disorder of extraembryonic membrane","type":"exact"},{"name":"extraembryonic membrane disease","type":"exact"},{"name":"extraembryonic membrane disease or disorder","type":"exact"}],"termid":"MONDO:0045013","xrefs":{"Monarch":{"xref_id":"0045013"}}}


id: GO:1900981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"negatively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phenazine biosynthetic process","synonyms":[{"name":"down regulation of acridizine biosynthesis","type":"related"},{"name":"down regulation of acridizine biosynthetic process","type":"related"},{"name":"down regulation of azophenylene biosynthesis","type":"related"},{"name":"down regulation of azophenylene biosynthetic process","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down regulation of phenazine biosynthetic process","type":"exact"},{"name":"down-regulation of acridizine biosynthesis","type":"related"},{"name":"down-regulation of acridizine biosynthetic process","type":"related"},{"name":"down-regulation of azophenylene biosynthesis","type":"related"},{"name":"down-regulation of azophenylene biosynthetic process","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"down-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"down-regulation of phenazine biosynthetic process","type":"exact"},{"name":"downregulation of acridizine biosynthesis","type":"related"},{"name":"downregulation of acridizine biosynthetic process","type":"related"},{"name":"downregulation of azophenylene biosynthesis","type":"related"},{"name":"downregulation of azophenylene biosynthetic process","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"downregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"downregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"downregulation of phenazine biosynthetic process","type":"exact"},{"name":"inhibition of acridizine biosynthesis","type":"related"},{"name":"inhibition of acridizine biosynthetic process","type":"related"},{"name":"inhibition of azophenylene biosynthesis","type":"related"},{"name":"inhibition of azophenylene biosynthetic process","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"inhibition of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthesis","type":"related"},{"name":"inhibition of dibenzopyrazine biosynthetic process","type":"related"},{"name":"inhibition of phenazine biosynthetic process","type":"narrow"},{"name":"negative regulation of acridizine biosynthesis","type":"related"},{"name":"negative regulation of acridizine biosynthetic process","type":"related"},{"name":"negative regulation of azophenylene biosynthesis","type":"related"},{"name":"negative regulation of azophenylene biosynthetic process","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"negative regulation of dibenzopyrazine biosynthetic process","type":"related"}],"termid":"GO:1900981"}


id: MONDO:0019407
data:
  {"annotated_genes":["SJAG_01071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86725],"is_not":false,"summary":null,"term":"MONDO:0019407"}]},"cv_name":"mondo","definition":"A bone development disease characterized by early developmental delay primarily involving speech, distinct facial features, short stature, brachydactyly, clubfoot deformities, cataracts, and microcephaly that has material basis in heterozygous mutation in COG4 on chromosome 16q22.1.","definition_xrefs":["PMID:30290151","ECO:0007645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01071":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"microcephalic osteodysplastic dysplasia, Saul-Wilson type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:738688839","GARD:16736","MEDGEN:722057","UMLS:C1300285","DOID:0111673","Orphanet:85172","OMIM:618150"],"synonyms":[{"name":"SWILS","type":"exact"},{"name":"Saul-Wilson syndrome","type":"exact"},{"name":"microcephalic osteodysplastic dysplasia","type":"exact"},{"name":"microcephalic osteodysplastic dysplasia, Saul-Wilson type","type":"exact"}],"termid":"MONDO:0019407","terms_by_termid":{"MONDO:0019407":null},"xrefs":{"Monarch":{"xref_id":"0019407"}}}


id: PBO:0084360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoserine-O-acetyltransferase; catalyzes the conversion of homoserine to O-acetyl homoserine which is the first step of the methionine biosynthetic pathway","termid":"PBO:0084360"}


id: GO:0003018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory process that occurs at the level of the vasculature.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular process in circulatory system","synonyms":[{"name":"vasculature process","type":"exact"}],"termid":"GO:0003018"}


id: PBO:0027641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_during_meiosis_II","termid":"PBO:0027641"}


id: PBO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis inducing protein Mei3","termid":"PBO:0003305"}


id: PBO:0053761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1003","termid":"PBO:0053761"}


id: PBO:0084913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic exit network regulator; forms GTPase-activating Bfa1p-Bub2p complex that binds Tem1p and spindle pole bodies, blocks cell cycle progression before anaphase in response to spindle and kinetochore damage","termid":"PBO:0084913"}


id: PBO:0062556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 3","termid":"PBO:0062556"}


id: PBO:0040017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 6","termid":"PBO:0040017"}


id: PBO:0039923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 25","termid":"PBO:0039923"}


id: PBO:0072599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"remodeling and spacing factor 1","termid":"PBO:0072599"}


id: GO:0009896
data:
  {"annotated_genes":["SJAG_00686","SJAG_04249","SJAG_05694","SJAG_04407","SJAG_00285","SJAG_02370","SJAG_00391","SJAG_04502","SJAG_05322","SJAG_01053","SJAG_03876","SJAG_03179","SJAG_01910","SJAG_04435","SJAG_04824","SJAG_04153","SJAG_02239","SJAG_03597","SJAG_01210","SJAG_01716","SJAG_01184","SJAG_03113","SJAG_04880","SJAG_02383","SJAG_05289","SJAG_00642","SJAG_04818","SJAG_01544","SJAG_03048","SJAG_04477","SJAG_01944","SJAG_00766","SJAG_03745","SJAG_02723","SJAG_00759","SJAG_05000","SJAG_16457","SJAG_05010","SJAG_04321","SJAG_00704","SJAG_01521","SJAG_01696","SJAG_00071","SJAG_00854","SJAG_02433","SJAG_03157","SJAG_02213","SJAG_04496","SJAG_01436","SJAG_02808","SJAG_01489","SJAG_03699","SJAG_04006","SJAG_02540","SJAG_00343","SJAG_04118","SJAG_03851","SJAG_00712","SJAG_04825","SJAG_01131","SJAG_01818","SJAG_02036","SJAG_05346","SJAG_04682","SJAG_04084","SJAG_01625","SJAG_03883","SJAG_00966","SJAG_00169","SJAG_02765","SJAG_04990","SJAG_04350","SJAG_02622","SJAG_00824","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[80024,112310,77928,58572,76141,74679],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[118410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[92009],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[118600,105584,93419,97574,115746,116185,104719,96248,102401,92587,107770,106785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[100254,115447,60178,79879,98381,98467,76959,70881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[90127,79301,75881,74125,77939,80062,91122,92842,92940,94672,95841,70707,115959,116901],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[92010],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91123,117527,66774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[89286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[108879,108969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[109984,73933,99769,112149,114883,99203,73953,80290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010508"},{"annotations":[69289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[106580,75784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[106974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[73142,90038,105237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[69070,67264,68534,65879,61571,67652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[117370,106975,112022,102699,109208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[99719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"},{"annotations":[89862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of substances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"positively_regulates","term_name":"catabolic 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regulation of catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of catabolic process","type":"narrow"},{"name":"positive regulation of breakdown","type":"exact"},{"name":"positive regulation of catabolism","type":"exact"},{"name":"positive regulation of degradation","type":"exact"},{"name":"stimulation of catabolic process","type":"narrow"},{"name":"up regulation of catabolic process","type":"exact"},{"name":"up-regulation of catabolic process","type":"exact"},{"name":"upregulation of catabolic process","type":"exact"}],"termid":"GO:0009896","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0010508":null,"GO:0016239":null,"GO:0032436":null,"GO:0036450":null,"GO:0060212":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:0140501":null,"GO:1901098":null,"GO:1901800":null,"GO:1903599":null,"GO:1904352":null,"GO:1905786":null,"GO:1990074":null,"GO:2000786":null}}


id: PBO:0041371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4orf46 pseudogene 3","termid":"PBO:0041371"}


id: CHEBI:29699
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tunicamycin","termid":"CHEBI:29699"}


id: PBO:0050577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate-glucosamine 3-sulfotransferase 2","termid":"PBO:0050577"}


id: PBO:0011435
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens SSB","termid":"PBO:0011435"}


id: GO:0036234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of glucuronic acid from a conjugated substrate.","definition_xrefs":["PMID:22294686","PMID:8560473","GOC:BHF","GOC:vk"],"gene_count":0,"genotype_count":0,"name":"obsolete deglucuronidation (obsolete GO:0036234)","termid":"GO:0036234"}


id: GO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process evolved to enable an interaction with an organism of a different species.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interspecies interaction between organisms","secondary_identifiers":["Reactome:R-HSA-9824443"],"synonyms":[{"name":"interaction with another species","type":"exact"},{"name":"interspecies interaction","type":"exact"},{"name":"interspecies interaction between organisms","type":"exact"},{"name":"interspecies interaction with other organisms","type":"exact"}],"termid":"GO:0044419"}


id: PBO:0061199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOBOX oogenesis homeobox","termid":"PBO:0061199"}


id: PBO:0062357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily R member 1 pseudogene","termid":"PBO:0062357"}


id: GO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus initiates, promotes, or enhances an NF-kappaB signaling cascade in its host organism.","definition_xrefs":["PMID:7845680","PMID:11907233"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host NF-kappaB cascade (obsolete GO:0039652)","synonyms":[{"name":"activation by virus of host NF-kappaB transcription factor activity","type":"related"}],"termid":"GO:0039652"}


id: PBO:0066445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV3 like, DNA directed polymerase zeta catalytic subunit","termid":"PBO:0066445"}


id: PBO:0084582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL060C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL061C","termid":"PBO:0084582"}


id: PBO:0073137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog A, vesicle trafficking protein","termid":"PBO:0073137"}


id: MONDO:0957003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary neuro-ophthalmological disease","secondary_identifiers":["UMLS:C5680540","GARD:20309","MEDGEN:1842469","Orphanet:183616"],"synonyms":[{"name":"genetic neuro-ophthalmological disease","type":"exact"}],"termid":"MONDO:0957003","xrefs":{"Monarch":{"xref_id":"0957003"}}}


id: PBO:0045363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 3","termid":"PBO:0045363"}


id: PBO:0090086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal ubiquitin-protein ligase E3 Pex12","termid":"PBO:0090086"}


id: MONDO:0018906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Follicular lymphoma is a form of non-Hodgkin lymphoma characterized by a proliferation of B cells whose nodular structure of follicular architecture is preserved.","definition_xrefs":["Orphanet:545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"follicular lymphoma","secondary_identifiers":["icd11.foundation:797822185","MESH:D008224","NORD:1983","UMLS:C0024301","SCTID:308121000","ONCOTREE:FL","NCIT:C3209","DOID:0050873","GARD:2356","HGNC:990","MEDGEN:7417","ICDO:9690/3"],"synonyms":[{"name":"follicle center lymphoma","type":"exact"},{"name":"follicle centre lymphoma","type":"exact"},{"name":"follicular center cell lymphoma","type":"exact"},{"name":"follicular centre cell lymphoma","type":"exact"},{"name":"follicular non-Hodgkin lymphoma","type":"exact"},{"name":"follicular non-Hodgkin's lymphoma","type":"exact"},{"name":"lymphoma, follicular","type":"related"},{"name":"lymphoma, follicular center cell","type":"exact"},{"name":"lymphoma, follicular centre cell","type":"exact"},{"name":"lymphoma, follicular, malignant","type":"exact"}],"termid":"MONDO:0018906","xrefs":{"Monarch":{"xref_id":"0018906"}}}


id: PBO:0027268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_copper_ion","termid":"PBO:0027268"}


id: MONDO:0800381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XX true hermaphroditism, SRY-positive","termid":"MONDO:0800381","xrefs":{"Monarch":{"xref_id":"0800381"}}}


id: GO:0046581
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"intercellular canaliculus","termid":"GO:0046581"}


id: PBO:0041572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 203","termid":"PBO:0041572"}


id: FYPO:0001461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the intracellular calcium ion (Ca2+) concentration briefly increases normally immediately following an extracellular Ca2+ stimulus. Normally, the intracellular Ca2+ concentration increases to a peak in a \\\"burst\\\" within one minute, and then decreases to a new steady-state concentration.","definition_xrefs":["PMID:21811607","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular calcium level","termid":"FYPO:0001199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus","synonyms":[{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal immediate intracellular calcium spike following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001461"}


id: MONDO:0016600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute neonatal citrullinemia type I is a severe form of citrullinemia type 1 characterized biologically by hyperammonemia and clinically by progressive lethargy, poor feeding and vomiting, seizures and possible loss of consciousness, within one to a few days of birth, with variable signs of increased intracranial pressure. The condition can lead to significant neurologic deficits.","definition_xrefs":["Orphanet:247546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia type I","termid":"MONDO:0008988"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"acute neonatal citrullinemia type I","secondary_identifiers":["GARD:20659","NANDO:2201094","UMLS:C5679618","MEDGEN:1843387"],"synonyms":[{"name":"acute neonatal citrullinemia type 1","type":"exact"},{"name":"classic citrullinemia type 1","type":"exact"},{"name":"classic citrullinemia type I","type":"exact"}],"termid":"MONDO:0016600","xrefs":{"Monarch":{"xref_id":"0016600"}}}


id: GO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ferric triacetylfusarinine C into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-dependent iron import into cell","termid":"GO:0033214"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0098771","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ferric triacetylfusarinine C import into cell","synonyms":[{"name":"ferric triacetylfusarinine C transport","type":"broad"}],"termid":"GO:0015686"}


id: PBO:0086604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression regulated by copper levels","termid":"PBO:0086604"}


id: PBO:0059952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 38","termid":"PBO:0059952"}


id: RO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of preys on","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preyed_upon_by","termid":"RO:0002458"}


id: PBO:0073298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 20","termid":"PBO:0073298"}


id: PR:Q9UST8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03401","PRO:DNx","PANTHER:PTHR10642:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.06c","secondary_identifiers":["UniProtKB:Q9UST8"],"synonyms":[{"name":"RNase H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH1","type":"exact"}],"termid":"PR:Q9UST8"}


id: GO:1990058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit replum over time, from its formation to the mature structure. The fruit replum is a portion of fruit placenta tissue that divides a fruit into two or more chambers and develops from a replum.","definition_xrefs":["PO:0025267","PMID:23133401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"fruit development","termid":"GO:0010154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit replum development","termid":"GO:1990058"}


id: PBO:0042645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 20 pseudogene","termid":"PBO:0042645"}


id: PBO:0091758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar copper exporter Ctr6","termid":"PBO:0091758"}


id: PATO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000857 lordosis reflex value (obsolete PATO:0000857)","termid":"PATO:0000857"}


id: GO:0051184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a cofactor from one side of a membrane to the other. A cofactor is a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor transmembrane transporter activity (obsolete GO:0051184)","synonyms":[{"name":"cofactor transporter activity","type":"related"},{"name":"vitamin or cofactor transporter activity","type":"broad"}],"termid":"GO:0051184"}


id: PBO:0076236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit 6","termid":"PBO:0076236"}


id: PBO:0044791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 4","termid":"PBO:0044791"}


id: MONDO:0100466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A patterned dystrophy of the retinal pigment epithelium characterized by abnormal accumulation of lipofuscin in a butterfly-shaped distribution at the retinal pigment epithelium level. Patients manifest with a slowly progressive loss of vision that often only becomes apparent in old age.","definition_xrefs":["Orphanet:99001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"butterfly-shaped pigment dystrophy","secondary_identifiers":["MEDGEN:1381271","SCTID:725590001","UMLS:C4511237","GARD:16890","icd11.foundation:1639469808"],"synonyms":[{"name":"butterfly-shaped pattern dystrophy","type":"exact"},{"name":"butterfly-shaped pigment dystrophy","type":"exact"},{"name":"butterfly-shaped pigmentary macular dystrophy","type":"exact"}],"termid":"MONDO:0100466","xrefs":{"Monarch":{"xref_id":"0100466"}}}


id: GO:1990231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer containing two STING monomers. It binds cyclic purine di-nucleotides. Activation of the sting complex by 2',5'-3'-5'-cyclic GMP-AMP activates nuclear transcription factor kB (NF-kB) and interferon regulatory factor 3 (IRF3) which then induce transcription of the genes encoding type I IFN and cytokines active in the innate immune response.","definition_xrefs":["PMID:23910378","PMID:23706668","GOC:bhm","PMID:22705373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0031410"],"is_obsolete":false,"name":"STING complex","synonyms":[{"name":"stimulator of interferon genes complex","type":"exact"}],"termid":"GO:1990231"}


id: PBO:0051316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-118 (pseudogene)","termid":"PBO:0051316"}


id: GO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving any of the intermediate compounds involved in the urea cycle, a cyclic metabolic pathway that converts waste nitrogen in the form of ammonium to urea.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete urea cycle intermediate metabolic process (obsolete GO:0000051)","synonyms":[{"name":"urea cycle intermediate metabolic process","type":"exact"},{"name":"urea cycle intermediate metabolism","type":"exact"}],"termid":"GO:0000051"}


id: PBO:0082837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; required for large (60S) ribosomal subunit biogenesis; acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit; involved in nuclear export of pre-ribosomes; required for maintenance of dsRNA virus; homolog of human CAATT-binding protein","termid":"PBO:0082837"}


id: MONDO:0015617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary gastro-esophageal disease (obsolete MONDO:0015617)","secondary_identifiers":["Orphanet:165658"],"synonyms":[{"name":"genetic gastro-esophageal disease","type":"exact"}],"termid":"MONDO:0015617","xrefs":{"Monarch":{"xref_id":"0015617"}}}


id: PBO:0045143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF11 pseudogene 1","termid":"PBO:0045143"}


id: PBO:0038639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 6","termid":"PBO:0038639"}


id: GO:0048137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The meiotic divisions undergone by the primary and secondary spermatocytes to produce haploid spermatids.","definition_xrefs":["GOC:jid","ISBN:0879694238","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatocyte division","synonyms":[{"name":"spermatocyte cell division","type":"exact"}],"termid":"GO:0048137"}


id: PBO:0065413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 2","termid":"PBO:0065413"}


id: MONDO:0016147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of dystrophin","secondary_identifiers":["UMLS:C5679787","MEDGEN:1826053","Orphanet:207085","GARD:2031","NANDO:1200487"],"synonyms":[{"name":"dystrophinopathy","type":"exact"}],"termid":"MONDO:0016147","xrefs":{"Monarch":{"xref_id":"0016147"}}}


id: PBO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Nnk1 (predicted)","termid":"PBO:0017096"}


id: PBO:0119270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP1","termid":"PBO:0119270"}


id: GO:0150006
data:
  {"annotated_genes":["SJAG_04896","SJAG_04679","SJAG_05338"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95755,97152,119291],"is_not":false,"summary":null,"term":"GO:0150006"}]},"cv_name":"cellular_component","definition":"A protein complex required for the activation of urease. Activator subunits dissociate before urease has catalytic function.","definition_xrefs":["PMID:16244137","PMID:28710280","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"urease activator complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0150006","terms_by_termid":{"GO:0150006":null}}


id: GO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast cupula development","termid":"GO:0048904"}


id: MONDO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 19 disorder","termid":"MONDO:0700024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 19","secondary_identifiers":["SCTID:726358004","MEDGEN:1379548","GARD:20857","Orphanet:262687","UMLS:C4518507"],"synonyms":[{"name":"partial duplication of chromosome type 19","type":"exact"},{"name":"partial trisomy of chromosome 19","type":"exact"}],"termid":"MONDO:0016937","xrefs":{"Monarch":{"xref_id":"0016937"}}}


id: PATO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000699 glutinous (obsolete PATO:0000699)","termid":"PATO:0000699"}


id: MONDO:0017260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic diseases with posterior uveitis (obsolete MONDO:0017260)","secondary_identifiers":["Orphanet:280930"],"termid":"MONDO:0017260","xrefs":{"Monarch":{"xref_id":"0017260"}}}


id: FYPO:0007565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding at an RNA polymerase II proximal promoter that contains a Mlu1 cell cycle box (MCB) by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:8223442","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding","termid":"FYPO:0002003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"abolished DNA binding at MCB","synonyms":[{"name":"RNA polymerase II proximal promoter sequence-specific DNA binding abolished at MCB","type":"exact"},{"name":"abolished DNA binding at Mlu1 cell cycle box","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at MCB","type":"exact"},{"name":"abolished RNA polymerase II proximal promoter sequence-specific DNA binding at Mlu1 cell cycle box","type":"exact"}],"termid":"FYPO:0007565"}


id: GO:0141130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts translation of mRNA into protein in its host by inactivating its ribosomes.","definition_xrefs":["PMID:1324134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host translation","termid":"GO:0039604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated inactivation of host ribosome","synonyms":[{"name":"symbiont-mediated host ribosome inactivation","type":"exact"}],"termid":"GO:0141130"}


id: FYPO:0001685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to purvalanol A is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to purvalanol A","synonyms":[{"name":"increased RNA accumulation during cellular response to purvalanol A","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to purvalanol A during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to purvalanol A","type":"narrow"},{"name":"increased transcript level during cellular response to purvalanol A","type":"exact"}],"termid":"FYPO:0001685"}


id: GO:0097464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Large complex spine protruding from a dendrite. Each excrescence is formed by a cluster of spine heads.","definition_xrefs":["PMID:730852","NIF_Subcellular:nlx_467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"thorny excrescence","termid":"GO:0097464"}


id: PBO:0048174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase catalytic subunit 1","termid":"PBO:0048174"}


id: PBO:0066310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 4","termid":"PBO:0066310"}


id: PBO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 68","termid":"PBO:0042011"}


id: PBO:0070250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 193 pseudogene","termid":"PBO:0070250"}


id: PBO:0082230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha catalytic subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082230"}


id: GO:0019775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of FAT10 from one protein to another via the reaction X-FAT10 + Y = Y-FAT10 + X, where both X-FAT10 and Y-FAT10 are covalent linkages.","definition_xrefs":["GOC:mah","PMID:12826404","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0140096","GO:0016740","GO:0019787"],"is_obsolete":false,"name":"FAT10 transferase activity","synonyms":[{"name":"FAT10 conjugating enzyme activity","type":"narrow"}],"termid":"GO:0019775"}


id: PBO:0030083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_tip","termid":"PBO:0030083"}


id: GO:0100062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that positively_regulates SREBP signaling pathway.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100062)","termid":"GO:0100062"}


id: PBO:0048604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 8 homolog","termid":"PBO:0048604"}


id: FYPO:0005333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to methyl methanesulfonate is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased protein accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased protein level during cellular response to MMS","type":"exact"},{"name":"increased protein level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005333"}


id: PR:Q09687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13C5.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoacetylglucosamine mutase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.05c","synonyms":[{"name":"N-acetylglucosamine-phosphate mutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC13C5.05c","type":"exact"},{"name":"acetylglucosamine phosphomutase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09687"}


id: MONDO:0006205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extraskeletal Ewing sarcoma/peripheral primitive neuroectodermal tumor (obsolete MONDO:0006205)","termid":"MONDO:0006205","xrefs":{"Monarch":{"xref_id":"0006205"}}}


id: MONDO:0018540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An auto inflammatory syndrome characterized by recurrent febrile episodes associated with aphthous stomatitis, pharyngitis and cervical adenitis.","definition_xrefs":["Orphanet:42642"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"excluded_subClassOf","term_name":"unexplained periodic fever syndrome","termid":"MONDO:0015158"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFAPA syndrome","secondary_identifiers":["GARD:5657","MEDGEN:909507","SCTID:717231003","UMLS:C4082167","DOID:0081451","NCIT:C116917"],"synonyms":[{"name":"Marshall syndrome","type":"related"},{"name":"Marshall syndrome with periodic fever","type":"exact"},{"name":"PFAPA","type":"exact"},{"name":"periodic fever, aphthous stomatitis, pharyngitis and adenitis","type":"exact"},{"name":"periodic fever, aphthous stomatitis, pharyngitis, adenitis syndrome","type":"exact"},{"name":"periodic fever-aphtous stomatitis-pharyngitis-adenopathy syndrome","type":"exact"}],"termid":"MONDO:0018540","xrefs":{"Monarch":{"xref_id":"0018540"}}}


id: PBO:0076955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta 3","termid":"PBO:0076955"}


id: GO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRK receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"neurotrophin TRK receptor binding","synonyms":[{"name":"neurotrophin TRK receptor ligand","type":"narrow"}],"termid":"GO:0005167"}


id: GO:1905406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mitotic cohesin loading.","definition_xrefs":["PMID:26687354","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mitotic cohesin loading (obsolete GO:1905406)","termid":"GO:1905406"}


id: PBO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fhl1","termid":"PBO:0002155"}


id: PBO:0028751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_plasma_membrane_present","termid":"PBO:0028751"}


id: GO:0010587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.","definition_xrefs":["PMID:17993620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"miRNA catabolic process","synonyms":[{"name":"microRNA catabolic process","type":"exact"}],"termid":"GO:0010587"}


id: GO:0018516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoyl-CoA + chloride + NADP+ = 2,4-dichlorobenzoyl-CoA + NADPH.","definition_xrefs":["RHEA:23076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,4-dichlorobenzoyl-CoA reductase activity","secondary_identifiers":["KEGG_REACTION:R05276","EC:1.21.1.2","MetaCyc:1.3.1.63-RXN","UM-BBD_reactionID:r0138"],"synonyms":[{"name":"4-chlorobenzoyl-CoA:NADP+ oxidoreductase (halogenating)","type":"related"}],"termid":"GO:0018516"}


id: MONDO:0017539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postaxial polydactyly of toes, unilateral (obsolete MONDO:0017539)","secondary_identifiers":["Orphanet:295179"],"termid":"MONDO:0017539","xrefs":{"Monarch":{"xref_id":"0017539"}}}


id: GO:1905303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macropinocytosis.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:18691641","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pinocytosis","termid":"GO:0048549"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"positively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of macropinocytosis","synonyms":[{"name":"activation of macropinocytosis","type":"narrow"},{"name":"up regulation of macropinocytosis","type":"exact"},{"name":"up-regulation of macropinocytosis","type":"exact"},{"name":"upregulation of macropinocytosis","type":"exact"}],"termid":"GO:1905303"}


id: PBO:0110196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex associated protein","termid":"PBO:0110196"}


id: PBO:0068874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 114, pseudogene","termid":"PBO:0068874"}


id: GO:0032782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of bile acid, composed of any of a group of steroid carboxylic acids occurring in bile, by a cell or a tissue.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"bile acid secretion","termid":"GO:0032782"}


id: MONDO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gangliosidosis (obsolete MONDO:0002284)","termid":"MONDO:0002284","xrefs":{"Monarch":{"xref_id":"0002284"}}}


id: MONDO:0009409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypervitaminosis a, susceptibility to","secondary_identifiers":["OMIM:240150","MEDGEN:343435","UMLS:C1855883"],"synonyms":[{"name":"hypervitaminosis a, susceptibility to","type":"exact"}],"termid":"MONDO:0009409","xrefs":{"Monarch":{"xref_id":"0009409"}}}


id: GO:0075334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075334)","termid":"GO:0075334"}


id: GO:1990858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lectin stimulus. A lectin is a carbohydrate-binding protein, highly specific for binding sugar moieties.","definition_xrefs":["PMID:25996210","PMID:26306444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lectin","termid":"GO:1990840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lectin","termid":"GO:1990858"}


id: PBO:0057207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376a-2","termid":"PBO:0057207"}


id: PBO:0090988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp36","termid":"PBO:0090988"}


id: PATO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along an apical-basal axis.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apical-basal polarity","termid":"PATO:0002023"}


id: MONDO:0970950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome, type 4","secondary_identifiers":["MEDGEN:1854023","OMIM:620819","UMLS:C5935619"],"termid":"MONDO:0970950","xrefs":{"Monarch":{"xref_id":"0970950"}}}


id: PBO:0028008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_during_meiotic_cell_cycle","termid":"PBO:0028008"}


id: GO:0038004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to the attainment of the full functional capacity of a ligand for an epidermal growth factor receptor. The ligand is functional when it can bind to and activate an epidermal growth factor receptor.","definition_xrefs":["PMID:11672524","GOC:signaling","PMID:11672525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor receptor ligand maturation","secondary_identifiers":["GO:0038005"],"synonyms":[{"name":"EGFR ligand maturation","type":"exact"},{"name":"EGFR ligand maturation by peptide bond cleavage","type":"narrow"},{"name":"EGFR ligand processing","type":"narrow"},{"name":"epidermal growth factor receptor ligand processing","type":"related"},{"name":"peptide bond cleavage involved in EGFR ligand maturation","type":"narrow"},{"name":"peptide bond cleavage involved in epidermal growth factor receptor ligand maturation","type":"related"}],"termid":"GO:0038004"}


id: FYPO:0004482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal.","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"},{"relation_name":"is_a","term_name":"abnormal vacuole fusion","termid":"FYPO:0006057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuole fusion during vegetative growth","synonyms":[{"name":"abnormal homotypic vacuole fusion during vegetative growth","type":"exact"},{"name":"abnormal vacuole fusion during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole fusion, non-autophagic, during vegetative growth","type":"exact"}],"termid":"FYPO:0004482"}


id: PBO:0068417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renalase, FAD dependent amine oxidase","termid":"PBO:0068417"}


id: PBO:0070726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 31","termid":"PBO:0070726"}


id: GO:1903526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane tubulation.","definition_xrefs":["GOC:pm","PMID:18388313","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of membrane tubulation","termid":"GO:1903525"},{"relation_name":"negatively_regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of membrane tubulation","synonyms":[{"name":"down regulation of membrane tubulation","type":"exact"},{"name":"down regulation of plasma membrane tubulation","type":"exact"},{"name":"down-regulation of membrane tubulation","type":"exact"},{"name":"down-regulation of plasma membrane tubulation","type":"exact"},{"name":"downregulation of membrane tubulation","type":"exact"},{"name":"downregulation of plasma membrane tubulation","type":"exact"},{"name":"inhibition of membrane tubulation","type":"narrow"},{"name":"inhibition of plasma membrane tubulation","type":"narrow"},{"name":"negative regulation of plasma membrane tubulation","type":"exact"}],"termid":"GO:1903526"}


id: MONDO:1011803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (limb-girdle), non-human animal","secondary_identifiers":["OMIA:001621"],"termid":"MONDO:1011803","xrefs":{"Monarch":{"xref_id":"1011803"}}}


id: MONDO:0020159
data:
  {"annotated_genes":["SJAG_00120","SJAG_00516","SJAG_00660","SJAG_01471","SJAG_02399","SJAG_03457","SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87582,87583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[87430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[85518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[87165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[87164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[86349,86350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[87443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[86978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital entropion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10014923","MEDGEN:540011","SCTID:20392000","Orphanet:98568","UMLS:C0266579"],"termid":"MONDO:0020159","terms_by_termid":{"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0020159"}}}


id: MOD:00544
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue containing common isotopes to a 6x(13)C labeled residue.","definition_xrefs":["Unimod:188","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled residue","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:00544"}


id: PATO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A perimeter which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased length","termid":"PATO:0000574"},{"relation_name":"is_a","term_name":"perimeter","termid":"PATO:0001711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased perimeter","termid":"PATO:0001713"}


id: PBO:0073116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1 pseudogene 4","termid":"PBO:0073116"}


id: GO:0061320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a pericardial nephrocyte. A pericardial nephrocyte is an insect renal cell that filters hemolymph and is found with other pericardial nephrocytes in two rows flanking the dorsal vessel. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:sart","PMID:19783135","CL:0000474","GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericardial nephrocyte differentiation","secondary_identifiers":["GO:0007513"],"synonyms":[{"name":"pericardial cell differentiation","type":"narrow"}],"termid":"GO:0061320"}


id: GO:1990281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of efflux transmembrane transporter activity.","definition_xrefs":["GOC:dos","PMID:9417051","PMID:21556065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"efflux pump complex","synonyms":[{"name":"efflux pump","type":"exact"},{"name":"efflux transmembrane transporter complex","type":"exact"}],"termid":"GO:1990281"}


id: PBO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-associated protein (predicted)","termid":"PBO:0004465"}


id: PBO:0077817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible nuclear protein 1","termid":"PBO:0077817"}


id: MONDO:0006916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abdominal symptoms after removal of the gallbladder. The common postoperative symptoms are often the same as those present before the operation, such as colic, bloating, nausea, and vomiting. There is pain on palpation of the right upper quadrant and sometimes jaundice. The term is often used, inaccurately, to describe such postoperative symptoms not due to gallbladder removal.","definition_xrefs":["MESH:D017562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"postcholecystectomy syndrome","secondary_identifiers":["EFO:1001117","ICD9:576.0","UMLS:C0152099","icd11.foundation:157319976","ICD10CM:K91.5","SCTID:90782003","MEDGEN:101815","DOID:9740"],"termid":"MONDO:0006916","xrefs":{"Monarch":{"xref_id":"0006916"}}}


id: PBO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase Adh4","termid":"PBO:0000161"}


id: PBO:0089545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation associated GTP binding protein Gtp1","termid":"PBO:0089545"}


id: PBO:0054364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1757","termid":"PBO:0054364"}


id: FYPO:0005347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus has a pointed shape during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:12390246","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002403","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"pointed nucleus during mitotic interphase","synonyms":[{"name":"pointed nucleus during interphase of mitotic cell cycle","type":"exact"},{"name":"pointed nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005347"}


id: PBO:0046101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 4","termid":"PBO:0046101"}


id: PBO:0063442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6D","termid":"PBO:0063442"}


id: PBO:0090180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sly1","termid":"PBO:0090180"}


id: PATO:0000220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000220 regeneration (obsolete PATO:0000220)","termid":"PATO:0000220"}


id: PBO:0079599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 E3","termid":"PBO:0079599"}


id: FYPO:0005331
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-prone translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-prone translesion synthesis","termid":"FYPO:0003892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"decreased error-prone translesion synthesis across TT-(6-4)","type":"exact"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"decreased error-prone translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005331"}


id: PBO:0011068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted)","termid":"PBO:0011068"}


id: GO:1990561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of copper ions.","definition_xrefs":["GOC:al","PMID:10593913"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to copper ion starvation (obsolete GO:1990561)","termid":"GO:1990561"}


id: PBO:0088009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II CAAX prenyl protease; involved in the proteolysis and maturation of Ras and the a-factor mating pheromone","termid":"PBO:0088009"}


id: GO:0047739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cephalosporin C + H2O = acetate + deacetylcephalosporin C + H+.","definition_xrefs":["RHEA:22596","EC:3.1.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788","GO:0019213"],"is_obsolete":false,"name":"cephalosporin-C deacetylase activity","secondary_identifiers":["KEGG_REACTION:R03062","MetaCyc:CEPHALOSPORIN-C-DEACETYLASE-RXN"],"synonyms":[{"name":"cephalosporin C acetyl-esterase activity","type":"related"},{"name":"cephalosporin C acetyl-hydrolase activity","type":"related"},{"name":"cephalosporin C acetylase activity","type":"related"},{"name":"cephalosporin C acetylesterase activity","type":"related"},{"name":"cephalosporin C deacetylase activity","type":"related"},{"name":"cephalosporin acetylesterase activity","type":"related"},{"name":"cephalosporin-C acetylhydrolase activity","type":"related"}],"termid":"GO:0047739"}


id: PBO:0042177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin A1","termid":"PBO:0042177"}


id: MONDO:0024336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the vulva. Representative examples include Bartholin gland adenocarcinoma, eccrine adenocarcinoma, apocrine adenocarcinoma, and sebaceous carcinoma.","definition_xrefs":["NCIT:C6380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar glandular neoplasm","termid":"MONDO:0002198"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar adenocarcinoma","secondary_identifiers":["DOID:2098","MEDGEN:234480","GARD:22007","Orphanet:494454","UMLS:C1336975"],"synonyms":[{"name":"adenocarcinoma of the vulva","type":"exact"},{"name":"adenocarcinoma of vulva","type":"exact"},{"name":"mammalian vulva adenocarcinoma","type":"exact"},{"name":"vulva adenocarcinoma","type":"exact"},{"name":"vulvar adenocarcinoma","type":"exact"}],"termid":"MONDO:0024336","xrefs":{"Monarch":{"xref_id":"0024336"}}}


id: PBO:0054352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1745","termid":"PBO:0054352"}


id: PBO:0062298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 9","termid":"PBO:0062298"}


id: PBO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_morphogenesis_of","termid":"PBO:0012523"}


id: MONDO:0020405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cleft mitral valve","termid":"MONDO:0019818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straddling and/or overriding mitral valve","secondary_identifiers":["GARD:19631","MEDGEN:1842816","Orphanet:99064","UMLS:C5681625"],"termid":"MONDO:0020405","xrefs":{"Monarch":{"xref_id":"0020405"}}}


id: MONDO:0022402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of neuronal migration that is characterized by abnormal cortex morphology, with pathological features including a variably decreased brain size, enlarged ventricles representing a stage of fetal development rather than hydrocephalus, heterotopia of the inferior olivary bodies that lie between the corpus pontobulbare and their normal location, aberrant or absent corticospinal tract, heterotopia of cerebellar granules and abnormally shaped dentate nuclei.","definition_xrefs":["PMID:2063992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agyria-pachygyria type 1","secondary_identifiers":["NANDO:1201068","NANDO:1201069"],"synonyms":[{"name":"Bielchowsky type of lissencephaly","type":"exact"},{"name":"type I lissencephaly","type":"exact"}],"termid":"MONDO:0022402","xrefs":{"Monarch":{"xref_id":"0022402"}}}


id: MONDO:0800479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neonatal/infantile epilepsy syndrome where seizures start in the neonate between day 4 and 7 of life and are often unilateral clonic events that recur and may alternate sides from seizure to seizure. Seizures can be repetitive over hours to days. Seizures remit by 4-6 months of age. A proportion of those affected may have seizures in later life. The child is expected to have normal developmental progress. This is distinguished from familial neonatal epilepsy on the basis of family history. These entities may have similar genetic etiologies, with de novo mutations responsible for the lack of family history in self-limited neonatal seizures.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile-onset self-limited epilepsy syndrome","termid":"MONDO:0800488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited neonatal seizures","synonyms":[{"name":"SeLNE","type":"exact"}],"termid":"MONDO:0800479","xrefs":{"Monarch":{"xref_id":"0800479"}}}


id: PBO:0030972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation","termid":"PBO:0030972"}


id: PBO:0074170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 1","termid":"PBO:0074170"}


id: GO:0036525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a glycated protein.","definition_xrefs":["GOC:PARL","PMID:25416785","PMID:14568004","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein repair","termid":"GO:0030091"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglycation","synonyms":[{"name":"glycated protein repair","type":"related"}],"termid":"GO:0036525"}


id: MONDO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented nodular adrenocortical disease (obsolete MONDO:0000084)","termid":"MONDO:0000084","xrefs":{"Monarch":{"xref_id":"0000084"}}}


id: PBO:0074254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B7 (putative)","termid":"PBO:0074254"}


id: SO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles: Residue(i): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees. Residue(i+1): -140 degrees < phi < -20 degrees, -90 degrees < psi < +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_nest_motif","termid":"SO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_left_right_motif","secondary_identifiers":["BS:00224"],"synonyms":[{"name":"nest_left_right","type":"exact"},{"name":"nest_lr","type":"exact"},{"name":"polypeptide nest left right motif","type":"exact"}],"termid":"SO:0001121"}


id: MONDO:0005582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent episodes of over-eating.","definition_xrefs":["NCIT:C97162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binge eating disorder","secondary_identifiers":["icd11.foundation:1673294767","UMLS:C0596170","MESH:D002032","EFO:0005924","SCTID:439960005","MEDGEN:154543"],"synonyms":[{"name":"binge eating","type":"exact"},{"name":"binge eating disorder","type":"exact"}],"termid":"MONDO:0005582","xrefs":{"Monarch":{"xref_id":"0005582"}}}


id: MONDO:0008046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant myoglobinuria is a rare metabolic myopathy characterized by episodic myalgia with myoglobinuria which is induced by fever, viral or bacterial infection, prolonged exercise or alcohol abuse, and could, on occasion, lead to acute renal failure. Between episodes, patients may be asymptomatic or could present elevated creatine kinase levels and mild muscle weakness. There have been no further descriptions in the literature since 1997.","definition_xrefs":["Orphanet:99846"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete muscular lipidosis (obsolete MONDO:0016117)","termid":"MONDO:0016117"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant myoglobinuria","secondary_identifiers":["SCTID:725903003","UMLS:C1834567","GARD:16917","MEDGEN:320384","icd11.foundation:149859272","MESH:C563546","OMIM:160010"],"synonyms":[{"name":"myoglobinuria, autosomal dominant","type":"exact"}],"termid":"MONDO:0008046","xrefs":{"Monarch":{"xref_id":"0008046"}}}


id: GO:0021594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the rhombomere. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere formation","termid":"GO:0021594"}


id: PBO:0078003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 3","termid":"PBO:0078003"}


id: SO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that can be recognized by both Fizzy/Cdc20- and FZR/Cdh1-activated anaphase-promoting complex/cyclosome (APC/C) and targets a protein for ubiquitination and subsequent degradation by the APC/C. The consensus sequence is RXXLXXXXN.","definition_xrefs":["PMID:12208841","PMID:1842691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"destruction_box","synonyms":[{"name":"D-box","type":"exact"},{"name":"destruction box","type":"exact"}],"termid":"SO:0001805"}


id: PBO:0092036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNase P RNA","termid":"PBO:0092036"}


id: PBO:0062442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 106 pseudogene","termid":"PBO:0062442"}


id: MONDO:0859591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low-grade glioma that occurs in children and encompasses tumors of astrocytic, oligodendroglial, and mixed glial-neuronal histology.","definition_xrefs":["DOID:0080830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood low-grade glioma","secondary_identifiers":["UMLS:C5908420","MEDGEN:1861125","NCIT:C202299"],"termid":"MONDO:0859591","xrefs":{"Monarch":{"xref_id":"0859591"}}}


id: PBO:0060594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural cell adhesion molecule 2","termid":"PBO:0060594"}


id: GO:0062206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-hydroxycopalyl diphosphate = (13R)-manoyl oxide + diphosphate.","definition_xrefs":["RHEA:54516","PMID:24990389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"manoyl oxide synthase activity","secondary_identifiers":["EC:4.2.3.190"],"termid":"GO:0062206"}


id: PBO:0048435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi brefeldin A resistant guanine nucleotide exchange factor 1","termid":"PBO:0048435"}


id: PBO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4","termid":"PBO:0042950"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: PBO:0067763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 63","termid":"PBO:0067763"}


id: PBO:0068310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 13","termid":"PBO:0068310"}


id: MONDO:0023595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotonic dystrophy that is present at birth.","definition_xrefs":["NCIT:C123308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"congenital myotonic dystrophy","secondary_identifiers":["UMLS:C0410226","GARD:9134","icd11.foundation:599230687","MEDGEN:98051"],"synonyms":[{"name":"Congenital Myotonic dystrophies","type":"related"},{"name":"Congenital Myotonic dystrophy","type":"related"},{"name":"Congenital myotonic dystrophy","type":"related"},{"name":"MYOTONIC dystrophy CONGEN","type":"related"},{"name":"Myotonic dystrophies, Congenital","type":"related"},{"name":"Myotonic dystrophy, Congenital","type":"related"},{"name":"congenital myotonic dystrophy","type":"exact"},{"name":"dystrophies, Congenital Myotonic","type":"related"},{"name":"dystrophy, Congenital Myotonic","type":"related"}],"termid":"MONDO:0023595","xrefs":{"Monarch":{"xref_id":"0023595"}}}


id: PBO:0091239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zn(2)-C6 fungal-type, truncated","termid":"PBO:0091239"}


id: GO:0042208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propylene metabolic process","termid":"GO:0018964"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"alkene catabolic process","termid":"GO:0043451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"propylene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:pro"],"synonyms":[{"name":"propylene breakdown","type":"exact"},{"name":"propylene catabolism","type":"exact"},{"name":"propylene degradation","type":"exact"}],"termid":"GO:0042208"}


id: PBO:0001977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs five related protein Cfr1","termid":"PBO:0001977"}


id: PBO:0074040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A24 pseudogene 1","termid":"PBO:0074040"}


id: PBO:0073329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 5","termid":"PBO:0073329"}


id: MONDO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congestive cardiomyopathy caused by a combination of dietary deficiency of selenium and the presence of a mutated strain of Coxsackievirus.","definition_xrefs":["Wikipedia:Keshan_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"},{"relation_name":"is_a","term_name":"coxsackievirus infectious disease","termid":"MONDO:0005721"},{"relation_name":"is_a","term_name":"nutritional deficiency disease","termid":"MONDO:0006873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Keshan disease","secondary_identifiers":["MESH:C536166","SCTID:46939000","GARD:8761","ICD9:269.3","DOID:0050083","MEDGEN:78639","UMLS:C0268095"],"synonyms":[{"name":"congestive cardiomyopathy due to selenium deficiency","type":"related"},{"name":"enlarged heart and poor heart function","type":"related"}],"termid":"MONDO:0000241","xrefs":{"Monarch":{"xref_id":"0000241"}}}


id: PBO:0060377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYBPC2 cis regulating lncRNA enhancer of myogenesis","termid":"PBO:0060377"}


id: GO:0007621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the receptiveness of a female to male advances.","definition_xrefs":["GOC:bf","PMID:11092827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female receptivity","synonyms":[{"name":"down regulation of female receptivity","type":"exact"},{"name":"down-regulation of female receptivity","type":"exact"},{"name":"downregulation of female receptivity","type":"exact"},{"name":"inhibition of female receptivity","type":"narrow"}],"termid":"GO:0007621"}


id: PBO:0068582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 33, pseudogene","termid":"PBO:0068582"}


id: PBO:0072249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 24","termid":"PBO:0072249"}


id: PBO:0090285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic (sporulation) septin Spn6","termid":"PBO:0090285"}


id: PBO:0045167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 1","termid":"PBO:0045167"}


id: GO:0018105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation of peptidyl-serine to form peptidyl-O-phospho-L-serine.","definition_xrefs":["RESID:AA0037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}


id: FYECO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was carried out in vivo.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in vivo","termid":"FYECO:0000141"}


id: PBO:0089377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, pinin ortholog Pnn1","termid":"PBO:0089377"}


id: GO:0015192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-phenylalanine from one side of a membrane to the other. L-phenylalanine is 2-amino-3-phenylpropanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"L-phenylalanine transmembrane transporter activity","synonyms":[{"name":"L-phenylalanine permease activity","type":"exact"},{"name":"L-phenylalanine transporter activity","type":"broad"}],"termid":"GO:0015192"}


id: GO:1902776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-sulfoquinovose(1-).","definition_xrefs":["GO_REF:0000068","GOC:dph","GOC:TermGenie","PMID:24463506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) metabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) metabolism","type":"exact"}],"termid":"GO:1902776"}


id: MONDO:0004742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogenous group of degenerative syndromes marked by progressive cerebellar dysfunction either in isolation or combined with other neurologic manifestations. Sporadic and inherited subtypes occur. Inheritance patterns include autosomal dominant, autosomal recessive, and X-linked.","definition_xrefs":["MESH:D013132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"primary cerebellar degeneration","secondary_identifiers":["ICD9:334.2","DOID:9277","MEDGEN:19466","UMLS:C0033132","SCTID:23732000"],"termid":"MONDO:0004742","xrefs":{"Monarch":{"xref_id":"0004742"}}}


id: PBO:0053943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1246","termid":"PBO:0053943"}


id: PBO:0078672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 5-1","termid":"PBO:0078672"}


id: MONDO:0006023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0006023 (obsolete MONDO:0006023)","termid":"MONDO:0006023","xrefs":{"Monarch":{"xref_id":"0006023"}}}


id: PBO:0078244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 23-1 (non-functional)","termid":"PBO:0078244"}


id: PBO:0110028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 10","termid":"PBO:0110028"}


id: GO:0035782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mature natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). A mature natural killer cell is a natural killer cell that is developmentally mature and expresses a variety of inhibitory and activating receptors that recognize MHC class and other stress related molecules.","definition_xrefs":["GOC:BHF","CL:0000824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature natural killer cell chemotaxis","synonyms":[{"name":"activated natural killer cell chemotaxis","type":"exact"}],"termid":"GO:0035782"}


id: MONDO:0014564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital bile acid synthesis defect in which the cause of the disease is a mutation in the ABCD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bile acid synthesis defect","termid":"MONDO:0018841"},{"relation_name":"is_a","term_name":"disorder of peroxisomal transporter","termid":"MONDO:0100372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0019053"],"is_obsolete":false,"name":"congenital bile acid synthesis defect 5","secondary_identifiers":["DOID:0111066","OMIM:616278","MEDGEN:904751","UMLS:C4225390"],"synonyms":[{"name":"ABCD3 congenital bile acid synthesis defect","type":"exact"},{"name":"CBAS5","type":"exact"},{"name":"bile acid synthesis defect, congenital, 5","type":"related"},{"name":"bile acid synthesis defect, congenital, type 5","type":"exact"},{"name":"congenital bile acid synthesis defect 5","type":"exact"},{"name":"congenital bile acid synthesis defect caused by mutation in ABCD3","type":"exact"},{"name":"congenital bile acid synthesis defect type 5","type":"exact"}],"termid":"MONDO:0014564","xrefs":{"Monarch":{"xref_id":"0014564"}}}


id: MONDO:0005325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the radius bone in which the continuity of the bone is broken.","definition_xrefs":["EFO:0003957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radius fracture","secondary_identifiers":["SCTID:12676007","MESH:D011885"],"termid":"MONDO:0005325","xrefs":{"Monarch":{"xref_id":"0005325"}}}


id: PBO:0029824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vegetative_cell_population_(obsolete_FYPO:0002413)","termid":"PBO:0029824"}


id: MONDO:0015771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 7 is a rare chromosomal anomaly syndrome, with a highly variable phenotype, mostly characterized by blaschkolinear skin pigmentary dysplasia, body asymmetry, enamel dysplasia, and developmental and growth delay. Intellectual disability, facial dysmorphism (e.g. frontal bossing, abnormal palpebral fissures, strabismus, abnormally shaped ears, and micrognathia), and genital anomalies (e.g. undescended testes) have also been observed. It has been reported to be associated with maternal uniparental disomy of chromosome 7, resulting in a Silver-Russell syndrome phenotype. Cases with no associated malformations have also been reported.","definition_xrefs":["Orphanet:1747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 7 disorder","termid":"MONDO:0700014"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 7","secondary_identifiers":["SCTID:764630003","MESH:C537822","UMLS:C2931631","MEDGEN:419125","GARD:5354"],"synonyms":[{"name":"Mosaic trisomy chromosome 7","type":"related"},{"name":"Mosaic trisomy type 7","type":"exact"},{"name":"trisomy 7 mosaicism","type":"related"}],"termid":"MONDO:0015771","xrefs":{"Monarch":{"xref_id":"0015771"}}}


id: PBO:0112994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylate kinase, required for purine metabolism; controls ATP homeostasis; localized to the cytoplasm and the mitochondria; lacks cleavable signal sequence; protein abundance increases in response to DNA replication stress; mutations affecting Adk1p catalytic activity deregulate expression of phosphate utilization genes PHO5 and PHO84; human homolog AK1 can complement yeast adk1 mutant","termid":"PBO:0112994"}


id: GO:0070652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that localizes to interphase centrosomes and to mitotic spindle tubules and regulates mitotic spindle assembly and centrosome integrity; in human, the complex consists of eight subunits, some of which are homologous to subunits of the Drosophila Augmin complex.","definition_xrefs":["PMID:19427217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"HAUS complex","synonyms":[{"name":"HAUS augmin complex","type":"exact"}],"termid":"GO:0070652"}


id: PBO:0113081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulfurase involved in iron-sulfur cluster biogenesis; required for thio-modification of mitochondrial and cytoplasmic tRNAs; involved in DNA damage response by providing iron-sulfur cluster cofactors for DNA repair enzymes; essential protein located predominantly in mitochondria","termid":"PBO:0113081"}


id: PBO:0079201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 5","termid":"PBO:0079201"}


id: PBO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1 pseudogene 3","termid":"PBO:0046685"}


id: RO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visits","termid":"RO:0002618"}


id: PBO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 15","termid":"PBO:0052503"}


id: MONDO:0015728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"15q overgrowth syndrome","termid":"MONDO:0017806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 15q","secondary_identifiers":["MEDGEN:419879","MESH:C538036","GARD:18740","NORD:942","Orphanet:1707","UMLS:C2931705"],"synonyms":[{"name":"Chromosome 15, Distal Trisomy 15q","type":"exact"},{"name":"distal duplication 15q","type":"exact"},{"name":"distal trisomy type 15q","type":"exact"},{"name":"telomeric duplication 15q","type":"exact"},{"name":"trisomy 15qter","type":"exact"}],"termid":"MONDO:0015728","xrefs":{"Monarch":{"xref_id":"0015728"}}}


id: PATO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001197 modified direction (obsolete PATO:0001197)","termid":"PATO:0001197"}


id: PBO:0055720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin A/C","termid":"PBO:0055720"}


id: PBO:0063687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progastricsin","termid":"PBO:0063687"}


id: GO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using c-di-GMP as the signal.","definition_xrefs":["PMID:28057864","PMID:22864416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"c-di-GMP signaling","synonyms":[{"name":"3',5'-cyclic di-GMP signaling","type":"exact"},{"name":"cyclic di-(3':5')-guanosine monophosphate signaling","type":"exact"},{"name":"cyclic di-GMP signaling","type":"exact"},{"name":"cyclic diguanylate signaling","type":"exact"}],"termid":"GO:0061939"}


id: PBO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Rad4","termid":"PBO:0000753"}


id: FYPO:0005110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal sodium export","synonyms":[{"name":"normal cellular sodium export","type":"exact"},{"name":"normal sodium export during mitotic cell cycle","type":"related"},{"name":"normal sodium export during vegetative growth","type":"exact"},{"name":"normal sodium export from cell","type":"exact"},{"name":"normal sodium ion export","type":"exact"}],"termid":"FYPO:0005110"}


id: MONDO:0006946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormalities of bone mineral metabolism associated with chronic kidney disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hyperparathyroidism of renal origin","termid":"MONDO:0001530"},{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal osteodystrophy","secondary_identifiers":["ICD10CM:N25.0","MESH:D012080","SCTID:16726004","EFO:1001152","DOID:13068","ICD9:588.0","MedDRA:10038489","UMLS:C0035086","MEDGEN:20524"],"synonyms":[{"name":"Osteodystrophies, renal","type":"related"},{"name":"osteodystrophy, renal","type":"related"},{"name":"renal Osteodystrophies","type":"related"},{"name":"renal rickets","type":"exact"},{"name":"rickets, renal","type":"related"}],"termid":"MONDO:0006946","xrefs":{"Monarch":{"xref_id":"0006946"}}}


id: PBO:0028085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_positive_regulation_of_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0028085"}


id: GO:0030201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heparan sulfate proteoglycans, which consist of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid, the former being either sulfated or deacetylated on its amino group as well as sulfated on one of its hydroxyl groups, and the latter being a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids.","definition_xrefs":["PMID:27241222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan metabolic process","synonyms":[{"name":"heparan sulfate proteoglycan metabolism","type":"exact"},{"name":"heparan sulphate proteoglycan metabolic process","type":"exact"},{"name":"heparan sulphate proteoglycan metabolism","type":"exact"},{"name":"heparin proteoglycan metabolic process","type":"related"}],"termid":"GO:0030201"}


id: PBO:0084340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynureninase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0084340"}


id: PBO:0047602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2A","termid":"PBO:0047602"}


id: MOD:01867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["OMSSA:210","Unimod:888#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on Y","type":"exact"}],"termid":"MOD:01867"}


id: MONDO:0010963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the WFS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 6","secondary_identifiers":["MEDGEN:331419","UMLS:C1833021","GARD:18101","MESH:C563421","OMIM:600965","DOID:0110584"],"synonyms":[{"name":"DFNA14","type":"narrow"},{"name":"DFNA38","type":"narrow"},{"name":"DFNA6","type":"narrow"},{"name":"WFS1 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 14","type":"narrow"},{"name":"autosomal dominant deafness 38","type":"narrow"},{"name":"autosomal dominant deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in WFS1","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 6","type":"narrow"},{"name":"deafness, autosomal dominant 14","type":"narrow"},{"name":"deafness, autosomal dominant 38","type":"narrow"},{"name":"deafness, autosomal dominant 6","type":"narrow"},{"name":"deafness, autosomal dominant 6/14/38","type":"narrow"},{"name":"deafness, autosomal dominant type 6","type":"narrow"}],"termid":"MONDO:0010963","xrefs":{"Monarch":{"xref_id":"0010963"}}}


id: GO:0046273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["GOC:jl","PMID:10074466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignan catabolic process","synonyms":[{"name":"lignan breakdown","type":"exact"},{"name":"lignan catabolism","type":"exact"},{"name":"lignan degradation","type":"exact"}],"termid":"GO:0046273"}


id: PBO:0113563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit, Ost4","termid":"PBO:0113563"}


id: FYPO:0005686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer microtubule bundles than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"microtubule bundles present in decreased numbers during mitotic interphase","synonyms":[{"name":"decreased interphase microtubule arrays","type":"related"},{"name":"decreased level of MT bundles during mitotic interphase","type":"exact"},{"name":"decreased microtubule bundling during mitotic interphase","type":"related"},{"name":"microtubule arrays present in decreased numbers during mitotic interphase","type":"related"},{"name":"microtubule bundles present in decreased numbers during interphase of mitotic cell cycle","type":"exact"},{"name":"microtubule bundles present in decreased numbers during mitotic interphase during vegetative growth","type":"exact"},{"name":"microtubule bundles present in reduced numbers during mitotic interphase","type":"exact"}],"termid":"FYPO:0005686"}


id: PBO:0080458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSTM2B divergent transcript","termid":"PBO:0080458"}


id: PBO:0051237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-44-2 (pseudogene)","termid":"PBO:0051237"}


id: PBO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor 3 pseudogene 1","termid":"PBO:0047762"}


id: PBO:0078901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 10-1","termid":"PBO:0078901"}


id: MONDO:0024466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated hereditary congenital facial paralysis","termid":"MONDO:0011090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"facial paresis, hereditary congenital, 1","secondary_identifiers":["MEDGEN:371292","OMIM:601471","UMLS:C1832284"],"synonyms":[{"name":"HCFP1","type":"exact"},{"name":"Mobius syndrome 2","type":"related"},{"name":"Mobius syndrome 2, formerly","type":"related"},{"name":"Moebius syndrome 2","type":"related"},{"name":"Moebius syndrome 2, formerly","type":"related"},{"name":"facial palsy, congenital, unilateral or bilateral","type":"related"},{"name":"facial paresis, hereditary congenital, 1","type":"exact"}],"termid":"MONDO:0024466","xrefs":{"Monarch":{"xref_id":"0024466"}}}


id: PBO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase (predicted)","termid":"PBO:0001632"}


id: MONDO:0007445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatopathia pigmentosa reticularis","secondary_identifiers":["OMIM:125595","Orphanet:86920","MEDGEN:98037","DOID:0111342","UMLS:C0406778","SCTID:239088003","MESH:C535374","GARD:8550"],"synonyms":[{"name":"DPR","type":"related"},{"name":"dermatopathia pigmentosa reticularis","type":"exact"}],"termid":"MONDO:0007445","xrefs":{"Monarch":{"xref_id":"0007445"}}}


id: PBO:0027890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_attachment_of_mitotic_spindle_microtubules_to_kinetochore","termid":"PBO:0027890"}


id: GO:1901535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA demethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA demethylation (obsolete GO:1901535)","termid":"GO:1901535"}


id: PBO:0087868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator that enhances pseudohyphal growth; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate; PHD1 has a paralog, SOK2, that arose from the whole genome duplication","termid":"PBO:0087868"}


id: PBO:0005322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC family protein kinase Gad8","termid":"PBO:0005322"}


id: PBO:0053160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor class A domain containing 2","termid":"PBO:0053160"}


id: PBO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 35, NatC auxiliary subunit","termid":"PBO:0060410"}


id: MONDO:0021077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that contains a single or multiple cystic spaces. Examples include cystadenoma, mucinous cystadenocarcinoma, and serous cystadenocarcinoma.","definition_xrefs":["NCIT:C6784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic neoplasm","secondary_identifiers":["UMLS:C1333190","MEDGEN:232404"],"synonyms":[{"name":"cystic neoplasm","type":"exact"},{"name":"cystic tumor","type":"exact"},{"name":"cystic tumour","type":"exact"}],"termid":"MONDO:0021077","xrefs":{"Monarch":{"xref_id":"0021077"}}}


id: MONDO:0017233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial Alzheimer-like prion disease","secondary_identifiers":["icd11.foundation:1297025427","MEDGEN:929151","GARD:21084","UMLS:C4303482","Orphanet:280397","SCTID:721219005"],"termid":"MONDO:0017233","xrefs":{"Monarch":{"xref_id":"0017233"}}}


id: PBO:0027387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_stationary_phase","termid":"PBO:0027387"}


id: PATO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000079 absolute rhythym (obsolete PATO:0000079)","termid":"PATO:0000079"}


id: GO:0019647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathway in which formaldehyde is used as a carbon source in the ribulose monophosphate cycle. Methanotrophic bacteria produce formaldehyde from the oxidation of methane and methanol, and then assimilate it via the ribulose monophosphate cycle to form intermediates of the central metabolic routes that are subsequently used for biosynthesis of cell material. Three molecules of formaldehyde are assimilated, forming a three-carbon intermediate of central metabolism; in this pathway, all cellular carbon is assimilated at the oxidation level of formaldehyde.","definition_xrefs":["MetaCyc:PWY-1861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde assimilation","termid":"GO:0019649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde assimilation via ribulose monophosphate cycle","synonyms":[{"name":"formaldehyde assimilation via RuMP cycle","type":"exact"},{"name":"ribulose monophosphate cycle","type":"broad"}],"termid":"GO:0019647"}


id: MONDO:0044262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cyanide, inability to smell (obsolete MONDO:0044262)","secondary_identifiers":["OMIM:304300"],"synonyms":[{"name":"cyanide, inability to smell","type":"related"}],"termid":"MONDO:0044262","xrefs":{"Monarch":{"xref_id":"0044262"}}}


id: GO:0060159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a dopamine receptor signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine receptor signaling pathway","synonyms":[{"name":"regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060159"}


id: GO:1902556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatidylinositol transporter activity.","definition_xrefs":["PMID:9890948","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatidylinositol transporter complex","termid":"GO:1902556"}


id: FYPO:0006391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable meiotic spindle during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0000120","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"meiotic spindle absent from cell during meiosis","synonyms":[{"name":"absent meiotic spindle during meiosis","type":"exact"},{"name":"meiotic spindle absent from cell during meiotic nuclear division","type":"exact"},{"name":"spindle absent from cell during meiosis","type":"exact"}],"termid":"FYPO:0006391"}


id: PBO:0031081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_metabolism_phenotype","termid":"PBO:0031081"}


id: PR:O74184
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of rapamycin complex subunit LST8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02946","PANTHER:PTHR19842:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein wat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.05c","secondary_identifiers":["UniProtKB:O74184"],"synonyms":[{"name":"Spom972h-MLST8","type":"exact"},{"name":"WD repeat-containing protein pop3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74184"}


id: PBO:0045572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 22","termid":"PBO:0045572"}


id: PBO:0030490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_succinate_import","termid":"PBO:0030490"}


id: MONDO:0044213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of idiopathic urticaria.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"idiopathic urticaria","termid":"MONDO:0044211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute idiopathic urticaria","secondary_identifiers":["UMLS:C0578869","MEDGEN:662266","SCTID:302161006"],"synonyms":[{"name":"acute idiopathic urticaria","type":"exact"},{"name":"idiopathic urticaria, acute","type":"exact"}],"termid":"MONDO:0044213","xrefs":{"Monarch":{"xref_id":"0044213"}}}


id: PBO:0067362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 461, pseudogene","termid":"PBO:0067362"}


id: MONDO:0017690
data:
  {"annotated_genes":["SJAG_03818","SJAG_02951","SJAG_01784","SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[86386,86387,86385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009257"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"disorder of galactose metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21308","SCTID:237963003","UMLS:C0342745","Orphanet:308467","MEDGEN:575203","icd11.foundation:1462194012"],"termid":"MONDO:0017690","terms_by_termid":{"MONDO:0009257":null,"MONDO:0009258":null},"xrefs":{"Monarch":{"xref_id":"0017690"}}}


id: MONDO:0017277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 12","secondary_identifiers":["Orphanet:282124","MEDGEN:1826080","GARD:21115","UMLS:C5680422"],"synonyms":[{"name":"partial deletion of chromosome type 12","type":"exact"},{"name":"partial monosomy of chromosome 12","type":"exact"}],"termid":"MONDO:0017277","xrefs":{"Monarch":{"xref_id":"0017277"}}}


id: PR:Q10245
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A very-long-chain 3-oxoacyl-CoA reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"very-long-chain 3-oxoacyl-CoA reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.15","secondary_identifiers":["UniProtKB:Q10245"],"synonyms":[{"name":"3-ketoacyl-CoA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"3-ketoreductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KAR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-HSD17B12","type":"exact"},{"name":"microsomal beta-keto-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10245"}


id: PBO:0091235
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.101871_101872insG","termid":"PBO:0091235"}


id: PBO:0004156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, SYF2 family (predicted)","termid":"PBO:0004156"}


id: GO:2000784
data:
  {"annotated_genes":["SJAG_04522","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107926,116882],"is_not":false,"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of cell polarity regulating cell shape.","definition_xrefs":["GOC:Mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000771"},{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity regulating cell shape","termid":"GO:2000782"},{"relation_name":"positively_regulates","term_name":"establishment of cell polarity regulating cell shape","termid":"GO:0071964"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"positively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"positive regulation of establishment of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000784","terms_by_termid":{"GO:2000784":null}}


id: PBO:0076945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin receptor","termid":"PBO:0076945"}


id: FYPO:0004745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at centromere outer repeat during vegetative growth","termid":"FYPO:0003097"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0004170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at centromere outer repeat region during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abolished histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004745"}


id: MONDO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute form of megacolon, severe pathological dilatation of the colon. It is associated with clinical conditions such as ulcerative colitis; crohn disease; amebic dysentery; or clostridium enterocolitis.","definition_xrefs":["MESH:D008532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megacolon","termid":"MONDO:0001273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"toxic megacolon","secondary_identifiers":["ICD9:564.7","MEDGEN:9940","ICD10CM:K59.31","SCTID:28536002","DOID:1770","icd11.foundation:1497870078","UMLS:C0025162"],"termid":"MONDO:0002105","xrefs":{"Monarch":{"xref_id":"0002105"}}}


id: GO:0030164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Structural change in proteins which destroys the native, active configuration without rupture of peptide bonds.","definition_xrefs":["GOC:kd","ISBN:3110145359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein denaturation","secondary_identifiers":["Wikipedia:Denaturation#Protein_denaturation"],"termid":"GO:0030164"}


id: GO:0042972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic linkages in beta-D-glucans containing (1->3) and (1->4) bonds.","definition_xrefs":["EC:3.2.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"licheninase activity","secondary_identifiers":["MetaCyc:3.2.1.73-RXN"],"synonyms":[{"name":"1,3-1,4-beta-D-glucan 4-glucanohydrolase activity","type":"exact"},{"name":"1,3-1,4-beta-glucan 4-glucanohydrolase activity","type":"exact"},{"name":"1,3;1,4-beta-glucan 4-glucanohydrolase activity","type":"related"},{"name":"1,3;1,4-beta-glucan endohydrolase activity","type":"related"},{"name":"beta-(1->3), (1->4)-D-glucan 4-glucanohydrolase activity","type":"related"},{"name":"beta-glucanase activity","type":"broad"},{"name":"endo-beta-1,3-1,4 glucanase activity","type":"related"},{"name":"lichenase activity","type":"exact"},{"name":"mixed linkage beta-glucanase activity","type":"related"}],"termid":"GO:0042972"}


id: PBO:0005808
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the chromatin assembly function of H2Bub is independent of H3K4 methylation","termid":"PBO:0005808"}


id: GO:0140025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial, indirect interaction between a contractile vacuole membrane and a site of discharge in the plasma membrane. This interaction is mediated by tethering factors (or complexes), which interact with both membranes. Interaction can occur via direct binding to membrane phospholipids or membrane proteins, or via binding to vesicle coat proteins. This process is distinct from and prior to docking and fusion.","definition_xrefs":["PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting","termid":"GO:0006903"},{"relation_name":"is_a","term_name":"vesicle tethering involved in exocytosis","termid":"GO:0090522"},{"relation_name":"part_of","term_name":"contractile vacuole discharge","termid":"GO:0070177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"contractile vacuole tethering involved in discharge","synonyms":[{"name":"contractile vacuole tethering to plasma membrane","type":"narrow"}],"termid":"GO:0140025"}


id: GO:0015501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glutamate(out) + Na+(out) = glutamate(in) + Na+(in).","definition_xrefs":["TC:2.A.27.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:sodium symporter activity","termid":"GO:0005283"},{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glutamate:sodium symporter activity","secondary_identifiers":["RHEA:29031","GO:0008027","MetaCyc:TRANS-RXN-122"],"synonyms":[{"name":"sodium/excitatory glutamate cotransporter activity","type":"broad"},{"name":"sodium/excitatory glutamate symporter activity","type":"exact"}],"termid":"GO:0015501"}


id: MONDO:0700004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the cause of the disease is known or unknown.","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic vs non-idiopathic","termid":"MONDO:0700004","xrefs":{"Monarch":{"xref_id":"0700004"}}}


id: PBO:0053411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 348","termid":"PBO:0053411"}


