# terms

id: MONDO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete papilledema (obsolete MONDO:0002003)","termid":"MONDO:0002003","xrefs":{"Monarch":{"xref_id":"0002003"}}}


id: MONDO:0016180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hematological disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016180)","secondary_identifiers":["Orphanet:209016"],"termid":"MONDO:0016180","xrefs":{"Monarch":{"xref_id":"0016180"}}}


id: PBO:0111346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Sof1","termid":"PBO:0111346"}


id: MONDO:0003576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0003576 (obsolete MONDO:0003576)","termid":"MONDO:0003576","xrefs":{"Monarch":{"xref_id":"0003576"}}}


id: PBO:0108620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 3","termid":"PBO:0108620"}


id: PBO:0026961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-actin_cortical_patches_present_in_increased_numbers","termid":"PBO:0026961"}


id: MONDO:0018640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary vasculitis","secondary_identifiers":["UMLS:C5681200","MEDGEN:1842960","GARD:21863","Orphanet:445197"],"termid":"MONDO:0018640","xrefs":{"Monarch":{"xref_id":"0018640"}}}


id: PBO:0116500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar and/or trans-Golgi protein processing dipeptidyl peptidase","termid":"PBO:0116500"}


id: PBO:0057049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 136","termid":"PBO:0057049"}


id: PBO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no apparent S. cerevisiae ortholog","termid":"PBO:0000055"}


id: PBO:0091241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, possible alternative UTR","termid":"PBO:0091241"}


id: PBO:0083739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments","termid":"PBO:0083739"}


id: PBO:0054637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2042","termid":"PBO:0054637"}


id: PBO:0003982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type II protein arginine N-methyltransferase Skb1","termid":"PBO:0003982"}


id: PBO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rrp3 (predicted)","termid":"PBO:0001630"}


id: GO:0008160
data:
  {"annotated_genes":["SJAG_01270","SJAG_00078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72056,76119],"is_not":false,"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a phosphotyrosine phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a tyrosyl phenolic group of a protein.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase activator activity","termid":"GO:0072542"},{"relation_name":"positively_regulates","term_name":"protein tyrosine phosphatase activity","termid":"GO:0004725"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_01270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"positively_regulates","termid":"GO:0004721"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0004721"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0016788"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"positively_regulates","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004721","GO:0140677","GO:0016788","GO:0030234","GO:0003824","GO:0098772","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein tyrosine phosphatase activator activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008160","terms_by_termid":{"GO:0008160":null}}


id: GO:0019239
data:
  {"annotated_genes":["SJAG_01997","SJAG_04380","SJAG_04189","SJAG_01673","SJAG_04123","SJAG_00352","SJAG_00107","SJAG_03771","SJAG_01054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79574],"is_not":false,"summary":null,"term":"GO:0019239"},{"annotations":[76778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003876"},{"annotations":[70177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004126"},{"annotations":[70275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004132"},{"annotations":[117471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008835"},{"annotations":[79371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008892"},{"annotations":[74060,101434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052717"},{"annotations":[72096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043829"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of an amino group from a substrate, producing a substituted or nonsubstituted ammonia (NH3/NH2R).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00352":null,"SJAG_01054":null,"SJAG_01673":null,"SJAG_01997":null,"SJAG_03771":null,"SJAG_04123":null,"SJAG_04189":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"deaminase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9754964","Reactome:R-HSA-9734745","Reactome:R-HSA-9014641","Reactome:R-HSA-74241"],"termid":"GO:0019239","terms_by_termid":{"GO:0003876":null,"GO:0004126":null,"GO:0004132":null,"GO:0008835":null,"GO:0008892":null,"GO:0019239":null,"GO:0043829":null,"GO:0052717":null}}


id: GO:0006278
data:
  {"annotated_genes":["SJAG_03855","SJAG_01677","SJAG_05979","SJAG_00939","SJAG_03685","SJAG_04586","SJAG_02194","SJAG_04266","SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77245],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"},{"annotations":[90979,69965,114128,80638,80596,70938,116247,108431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007004"}]},"cv_name":"biological_process","definition":"A DNA biosynthetic process that uses RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strand.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"RNA-templated DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162589"],"synonyms":[{"name":"RNA-dependent DNA biosynthetic process","type":"exact"}],"termid":"GO:0006278","terms_by_termid":{"GO:0007004":null,"GO:0032210":null}}


id: PBO:0083917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formin inhibitor; negatively regulates Bnr1-mediated actin filament nucleation but not filament elongation; performs distinct but overlapping roles with Hof1p to control actin cable assembly and polarized secretion; bnr1 bil2 double mutants are inviable; localizes to the cytosol, secretory vesicles and sites of polarized growth","termid":"PBO:0083917"}


id: SO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that can be recognized by FZR/Cdh1-activated anaphase-promoting complex/cyclosome (APC/C) and targets a protein for ubiquitination and subsequent degradation by the APC/C. The consensus sequence is KENXXXN.","definition_xrefs":["PMID:18426916","PMID:1220884","PMID:10733526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"KEN_box","synonyms":[{"name":"KEN box","type":"exact"}],"termid":"SO:0001807"}


id: FYPO:0001253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer than normal, has three or more nuclei and two or more septa, and the septa are not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated multinucleate vegetative cell","termid":"FYPO:0000133"},{"relation_name":"is_a","term_name":"elongated multiseptate vegetative cell","termid":"FYPO:0000223"},{"relation_name":"is_a","term_name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei","secondary_identifiers":["FYPO:0005056"],"synonyms":[{"name":"elongated multinucleate multiseptate cell, single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multinucleate multiseptate vegetative cell, single septa between nuclei during mitotic cell cycle","type":"related"},{"name":"elongated multiseptate cell, with three or more nuclei and single septa between nuclei during vegetative growth","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei","type":"exact"},{"name":"elongated multiseptate vegetative cell, with three or more nuclei and single septa between nuclei during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001253"}


id: PBO:0041278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 4","termid":"PBO:0041278"}


id: PBO:0028324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_binding_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028324"}


id: PBO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 7","termid":"PBO:0072020"}


id: GO:1905596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of low-density lipoprotein particle receptor binding.","definition_xrefs":["GOC:nc","PMID:22848640","GOC:TermGenie","GOC:BHF","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of receptor binding","termid":"GO:1900121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of low-density lipoprotein particle receptor binding","synonyms":[{"name":"down regulation of LDL receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"down-regulation of LDL receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"downregulation of LDL receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein particle receptor binding","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor binding","type":"exact"},{"name":"inhibition of LDL receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein particle receptor binding","type":"narrow"},{"name":"inhibition of low-density lipoprotein receptor binding","type":"narrow"},{"name":"negative regulation of LDL receptor binding","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:1905596"}


id: MONDO:0033372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 63","secondary_identifiers":["DOID:0080426","MEDGEN:1646846","OMIM:617976","UMLS:C4693810"],"synonyms":[{"name":"DEE63","type":"exact"},{"name":"EIEE63","type":"exact"},{"name":"developmental and epileptic encephalopathy 63","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 63","type":"exact"}],"termid":"MONDO:0033372","xrefs":{"Monarch":{"xref_id":"0033372"}}}


id: GO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK during sporulation (sensu Fungi) (obsolete GO:0030440)","synonyms":[{"name":"activation of MAPKK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030440"}


id: MONDO:0011245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"KID syndrome","termid":"MONDO:0018781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, hystrix-like, with hearing loss","secondary_identifiers":["MESH:C566528","OMIM:602540","UMLS:C1865234","MEDGEN:355410","GARD:15349"],"synonyms":[{"name":"HID syndrome","type":"related"},{"name":"hystrix-like ichthyosis with deafness","type":"exact"},{"name":"ichthyosis, hystrix-like, with deafness","type":"narrow"}],"termid":"MONDO:0011245","xrefs":{"Monarch":{"xref_id":"0011245"}}}


id: PBO:0001791
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.14.-","termid":"PBO:0001791"}


id: MONDO:0017137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Onchocerciasis is a form of filariasis, caused by the parasitic worm Onchocerca volvulus, transmitted by the black fly. The infection can either be asymptomatic or manifest as an ocular disease (river blindness) with itchy eyes, erythema, photophobia, onchodermatitis or onchocercal skin disease (classified into acute papular, chronic papular, lichenified, atrophic, and depigmentated) and onchocercomas (over bony prominences). Other classic clinical manifestations are ichthyosis-like lesions (''lizard skin'') and ''hanging groin'', which may be associated with lymphadenopathy.","definition_xrefs":["Orphanet:2737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"onchocerciasis","secondary_identifiers":["MEDGEN:14477","DOID:11678","MedDRA:10030314","UMLS:C0029001","GARD:7252","ICD10CM:B73","icd11.foundation:106136071","MESH:D009855","SCTID:38539003","NCIT:C34861","MedDRA:10039202","EFO:0007402","ICD9:125.3"],"synonyms":[{"name":"Onchocerca volvulus infection","type":"exact"},{"name":"River blindness","type":"related"},{"name":"Robles' disease","type":"related"},{"name":"infection by Onchocerca volvulus","type":"exact"},{"name":"infection caused by Onchocerca volvulus","type":"related"},{"name":"onchocerciasis","type":"exact"},{"name":"onchocercosis","type":"related"},{"name":"volvulosis","type":"exact"}],"termid":"MONDO:0017137","xrefs":{"Monarch":{"xref_id":"0017137"}}}


id: PBO:0079681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3B","termid":"PBO:0079681"}


id: PBO:0026788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_heterochromatin_at_mat2P_silent_mating-type_cassette","termid":"PBO:0026788"}


id: MOD:01063
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monomethylated phenylalanine.","definition_xrefs":["DeltaMass:198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated phenylalanine","termid":"MOD:00717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated phenylalanine","synonyms":[{"name":"NMePhe","type":"exact"}],"termid":"MOD:01063"}


id: FYPO:0005562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are shorter than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PMID:26124291","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short microtubule bundle","termid":"FYPO:0005797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"short stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle length","type":"exact"},{"name":"short Q-MT bundles","type":"exact"},{"name":"short quiescent cell MT bundle","type":"exact"},{"name":"short quiescent cell microtubule bundle","type":"exact"},{"name":"short stable microtubule array","type":"related"},{"name":"short static microtubule bundle","type":"exact"}],"termid":"FYPO:0005562"}


id: PBO:0089397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma1","termid":"PBO:0089397"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: GO:0006604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphoarginine, a phosphagen of L-arginine with phosphoric acid containing the phosphoamide bond. It is a source of energy in the contraction of muscle in invertebrates, corresponding to phosphocreatine in the muscles of vertebrates.","definition_xrefs":["PMID:16371597","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphagen metabolic process","termid":"GO:0006599"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phosphoarginine metabolic process","synonyms":[{"name":"phosphoarginine metabolism","type":"exact"}],"termid":"GO:0006604"}


id: GO:0047561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyanthranilate + O2 = 6-imino-5-oxocyclohexa-1,3-dienecarboxylate + H2O2.","definition_xrefs":["EC:1.10.3.5","RHEA:17245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyanthranilate oxidase activity","secondary_identifiers":["MetaCyc:3-HYDROXYANTHRANILATE-OXIDASE-RXN","KEGG_REACTION:R02666"],"synonyms":[{"name":"3-hydroxyanthranilate:oxygen oxidoreductase activity","type":"related"},{"name":"3-hydroxyanthranilic acid oxidase activity","type":"related"}],"termid":"GO:0047561"}


id: PBO:0063333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2","termid":"PBO:0063333"}


id: GO:0050226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + galactosylsphingosine = adenosine 3',5'-bisphosphate + psychosine sulfate.","definition_xrefs":["EC:2.8.2.13","MetaCyc:PSYCHOSINE-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"psychosine sulfotransferase activity","secondary_identifiers":["RHEA:14137"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate-psychosine sulphotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylsphingosine sulfotransferase activity","type":"related"},{"name":"PAPS:psychosine sulphotransferase activity","type":"related"},{"name":"psychosine sulphotransferase activity","type":"exact"}],"termid":"GO:0050226"}


id: PBO:0027849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_UV","termid":"PBO:0027849"}


id: GO:0045950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that inhibits or decreases the rate of DNA recombination during mitosis.","definition_xrefs":["GOC:hjd","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"negatively_regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic recombination","synonyms":[{"name":"down regulation of mitotic recombination","type":"exact"},{"name":"down-regulation of mitotic recombination","type":"exact"},{"name":"downregulation of mitotic recombination","type":"exact"},{"name":"inhibition of mitotic recombination","type":"narrow"},{"name":"negative regulation of recombination within rDNA repeats","type":"narrow"}],"termid":"GO:0045950"}


id: MONDO:0006576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe cellulitis of the submaxillary space with secondary involvement of the sublingual and submental space. It usually results from infection in the lower molar area or from a penetrating injury to the mouth floor. (From Dorland, 27th ed)","definition_xrefs":["MESH:D008158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulitis","termid":"MONDO:0005230"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ludwig's angina","secondary_identifiers":["DOID:4558","ICD9:528.3","UMLS:C0024081","SCTID:196542004","MEDGEN:44205","Wikipedia:Ludwig's_angina"],"synonyms":[{"name":"Ludwig angina","type":"exact"},{"name":"cellulitis (disease) of mouth floor","type":"exact"},{"name":"cellulitis of floor of mouth","type":"exact"},{"name":"mouth floor cellulitis (disease)","type":"exact"}],"termid":"MONDO:0006576","xrefs":{"Monarch":{"xref_id":"0006576"}}}


id: PBO:0040088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase family member H","termid":"PBO:0040088"}


id: FYPO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[119496,119488,119482,119467,119493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a chemical stimulus. Resistance to a chemical is usually measured by determining the maximum concentration of the chemical at which a population of cells grow and divide, and cells are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"increased resistance to chemical","termid":"FYPO:0002682"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"increased resistance to chemical during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_04551","SJAG_00610"],"single_locus_genotype_uniquenames":["pck2delta","pmk1delta","pck1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased resistance to chemical during mitotic cell cycle","type":"related"},{"name":"resistance to chemicals: increased during vegetative growth","type":"exact"},{"name":"resistant to chemical during vegetative growth","type":"exact"}],"termid":"FYPO:0000126","terms_by_termid":{"FYPO:0005152":null,"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PR:Q10067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00791","PANTHER:PTHR12748:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.01c","secondary_identifiers":["UniProtKB:Q10067"],"synonyms":[{"name":"Spom972h-ORC3","type":"exact"}],"termid":"PR:Q10067"}


id: PBO:0041866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 12 (gene/pseudogene)","termid":"PBO:0041866"}


id: SO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding pyrrolysyl tRNA (SO:0000766).","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrrolysine_tRNA_primary_transcript","synonyms":[{"name":"pyrrolysine tRNA primary transcript","type":"exact"}],"termid":"SO:0001178"}


id: MONDO:0014547
data:
  {"annotated_genes":["SJAG_04856"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85770],"is_not":false,"summary":null,"term":"MONDO:0014547"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the NARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 24","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17765","OMIM:616239","Orphanet:444458","UMLS:C4015643","DOID:0111485","MEDGEN:864080"],"synonyms":[{"name":"COXPD24","type":"exact"},{"name":"NARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 24","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in NARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 24","type":"exact"}],"termid":"MONDO:0014547","terms_by_termid":{"MONDO:0014547":null},"xrefs":{"Monarch":{"xref_id":"0014547"}}}


id: PBO:0083791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in vesicle-mediated ER to Golgi transport; binds membranes and functions during vesicle docking to the Golgi; required for assembly of the ER-to-Golgi SNARE complex","termid":"PBO:0083791"}


id: GO:0008181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tumor suppressor (obsolete GO:0008181)","synonyms":[{"name":"tumor suppressor","type":"exact"}],"termid":"GO:0008181"}


id: PBO:0039387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylase alpha 2A","termid":"PBO:0039387"}


id: MONDO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bacterial toxic-shock syndrome (obsolete MONDO:0018179)","termid":"MONDO:0018179","xrefs":{"Monarch":{"xref_id":"0018179"}}}


id: PR:O74311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetyltransferase MAK3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23091:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.06","secondary_identifiers":["UniProtKB:O74311"],"synonyms":[{"name":"N-terminal acetyltransferase C complex catalytic subunit mak3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatC catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC15D4.06","type":"related"},{"name":"Spom972h-NAA30","type":"exact"},{"name":"mak3","type":"related"}],"termid":"PR:O74311"}


id: GO:0005373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A transporter of heavy metal ions that utilizes a carrier-mediated process to catalyze uniport, symport or antiport between aqueous phases on either side of a lipid membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion porter activity (obsolete GO:0005373)","synonyms":[{"name":"heavy metal ion porter activity","type":"exact"},{"name":"metal ion transporter","type":"broad"}],"termid":"GO:0005373"}


id: PBO:0071781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 9","termid":"PBO:0071781"}


id: FYPO:0003720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the 2'-O-methylation of a nucleotide residue does not occur at a specific site in an rRNA molecule that is normally modified.","definition_xrefs":["PomBase:mah","GO:0000452","PMID:17222800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"snoRNA guided rRNA 2'-O-methylation abolished at specific site","termid":"FYPO:0003720"}


id: PBO:0047007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A10","termid":"PBO:0047007"}


id: GO:1903146
data:
  {"annotated_genes":["SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrion degradation by an autophagic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","PMID:24600391","GOC:TermGenie","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"regulates","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of autophagy of mitochondrion","references_by_uniquename":{"GO_REF:0000104":null},"synonyms":[{"name":"regulation of mitochondrion degradation","type":"broad"}],"termid":"GO:1903146","terms_by_termid":{"GO:1903599":null}}


id: MONDO:0958278
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87469],"is_not":false,"summary":null,"term":"MONDO:0958278"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and characteristic brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1855201","OMIM:620746","Orphanet:664430","UMLS:C5935589"],"termid":"MONDO:0958278","terms_by_termid":{"MONDO:0958278":null},"xrefs":{"Monarch":{"xref_id":"0958278"}}}


id: PBO:0073784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 4 pseudogene 1","termid":"PBO:0073784"}


id: GO:0016583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome modeling (obsolete GO:0016583)","synonyms":[{"name":"nucleosome modeling","type":"exact"}],"termid":"GO:0016583"}


id: GO:0051066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a dihydrobiopterin, a reduced pteridine derivative related to folic acid; it acts as an electron carrier in tyrosine biosynthesis and its quinoid form is produced by oxidation of tetrahydrobiopterin in several biological hydroxylation reactions.","definition_xrefs":["PMID:2557335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dihydrobiopterin metabolic process","synonyms":[{"name":"6,7-dihydrobiopterin metabolic process","type":"narrow"},{"name":"7,8-dihydrobiopterin metabolic process","type":"narrow"},{"name":"dihydrobiopterin reduction","type":"narrow"},{"name":"dihydropterin metabolic process","type":"exact"},{"name":"dihydropterin metabolism","type":"exact"}],"termid":"GO:0051066"}


id: PBO:0077077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAM Rac1 associated GEF 2","termid":"PBO:0077077"}


id: PBO:0047967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(X)(q28) E","termid":"PBO:0047967"}


id: PBO:0082810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved casein kinase, monopolin subunit; regulates diverse events including vesicular traffic, DNA repair, CVT pathway, cohesion cleavage, attachment of sister kinetochores at meiosis I, exit from meiosis II, and ribosomal subunit biogenesis; binds the RNAPII CTD; phosphorylates COPII coat subunits; interacts with Sit4p phosphatase; antagonizes calcineurin signaling, reducing nuclear accumulation of Crz1p; phosphorylates Dsn1p; homolog of mammalian CK1delta","termid":"PBO:0082810"}


id: PBO:0108672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK/PAR-1 kinase Kin1","termid":"PBO:0108672"}


id: PBO:0039088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin II receptor type 2","termid":"PBO:0039088"}


id: PBO:0066271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member E","termid":"PBO:0066271"}


id: PBO:0085615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA replication; component of the Mcm2-7 hexameric helicase complex that binds chromatin as a part of the pre-replicative complex; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085615"}


id: PBO:0072592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRS1 divergent transcript","termid":"PBO:0072592"}


id: GO:1903017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exo-alpha-sialidase activity.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:23544079","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of exo-alpha-sialidase activity","synonyms":[{"name":"activation of N-acylneuraminate glycohydrolase activity","type":"narrow"},{"name":"activation of acetylneuraminidase activity","type":"narrow"},{"name":"activation of acetylneuraminyl hydrolase activity","type":"narrow"},{"name":"activation of alpha-neuraminidase activity","type":"narrow"},{"name":"activation of exo-alpha-sialidase activity","type":"narrow"},{"name":"activation of neuraminidase activity","type":"narrow"},{"name":"activation of sialidase activity","type":"narrow"},{"name":"positive regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"positive regulation of acetylneuraminidase activity","type":"exact"},{"name":"positive regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"positive regulation of alpha-neuraminidase activity","type":"exact"},{"name":"positive regulation of neuraminidase activity","type":"exact"},{"name":"positive regulation of sialidase activity","type":"exact"},{"name":"up regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up regulation of acetylneuraminidase activity","type":"exact"},{"name":"up regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up regulation of neuraminidase activity","type":"exact"},{"name":"up regulation of sialidase activity","type":"exact"},{"name":"up-regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up-regulation of acetylneuraminidase activity","type":"exact"},{"name":"up-regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up-regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up-regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up-regulation of neuraminidase activity","type":"exact"},{"name":"up-regulation of sialidase activity","type":"exact"},{"name":"upregulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"upregulation of acetylneuraminidase activity","type":"exact"},{"name":"upregulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"upregulation of alpha-neuraminidase activity","type":"exact"},{"name":"upregulation of exo-alpha-sialidase activity","type":"exact"},{"name":"upregulation of neuraminidase activity","type":"exact"},{"name":"upregulation of sialidase activity","type":"exact"}],"termid":"GO:1903017"}


id: GO:0018671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + NAD(P)H + H+ + O2 = 3,4-dihydroxybenzoate + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.14.13.33-RXN"],"synonyms":[{"name":"4-hydroxybenzoate 3-hydroxylase activity","type":"broad"},{"name":"4-hydroxybenzoate 3-monooxygenase (reduced nicotinamide adenine dinucleotide (phosphate))","type":"exact"},{"name":"4-hydroxybenzoate,NAD(P)H:oxygen oxidoreductase (3-hydroxylating)","type":"related"},{"name":"4-hydroxybenzoate-3-hydroxylase activity","type":"related"}],"termid":"GO:0018671"}


id: PBO:0059974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 19","termid":"PBO:0059974"}


id: PBO:0061682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUP107 divergent transcript","termid":"PBO:0061682"}


id: MONDO:0007106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sphincter dysplasia","secondary_identifiers":["UMLS:C1862936","MESH:C538254","MEDGEN:350794","OMIM:105563"],"synonyms":[{"name":"ASDP","type":"related"},{"name":"anal sphincter dysplasia","type":"exact"}],"termid":"MONDO:0007106","xrefs":{"Monarch":{"xref_id":"0007106"}}}


id: PBO:0056016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 homolog","termid":"PBO:0056016"}


id: PR:O74733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cleavage and polyadenylation specificity factor subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02722","PANTHER:PTHR10644:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cft1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.08","secondary_identifiers":["UniProtKB:O74733"],"synonyms":[{"name":"Spom972h-CPSF1","type":"exact"},{"name":"cleavage factor two protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74733"}


id: FYPO:0006780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to Rbin-1. Cells stop growing (and may die) at a concentration of Rbin-1 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to Rbin-1","synonyms":[{"name":"hypersensitive to Rbin-1","type":"exact"},{"name":"sensitive to Rbin-1 during mitotic cell cycle","type":"related"},{"name":"sensitive to Rbin-1 during vegetative growth","type":"exact"},{"name":"sensitive to ribozinoindole-1","type":"exact"}],"termid":"FYPO:0006780"}


id: GO:1900767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fonsecin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone metabolic process","termid":"GO:1900785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fonsecin metabolic process","synonyms":[{"name":"fonsecin metabolism","type":"exact"}],"termid":"GO:1900767"}


id: GO:1904215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein import into chloroplast stroma.","definition_xrefs":["PMID:25901327","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"regulates","term_name":"protein import into chloroplast stroma","termid":"GO:0045037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of protein import into chloroplast stroma","synonyms":[{"name":"regulation of chloroplast stroma protein import","type":"exact"},{"name":"regulation of protein transport into chloroplast stroma","type":"exact"}],"termid":"GO:1904215"}


id: GO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inactivity","termid":"GO:0014854"}


id: PBO:0030210
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_protamine_sulfate","termid":"PBO:0030210"}


id: GO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + cation(out) = amino acid(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"amino acid:monoatomic cation symporter activity","synonyms":[{"name":"amino acid:cation symporter activity","type":"broad"},{"name":"cation/amino acid symporter activity","type":"exact"},{"name":"cation:amino acid symporter activity","type":"exact"}],"termid":"GO:0005416"}


id: PBO:0038882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 8","termid":"PBO:0038882"}


id: MONDO:0006537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pigmented lesions that arise from the conjunctiva include nevus, complexion-associated melanosis (CAM), primary acquired melanosis (PAM), and malignant melanoma.1,2All of these lesions arise from melanocytes. However, a number of other lesions have a similar appearance but a different source, such as pigment deposits from silver and iron.","definition_xrefs":["EFO:1000682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival deposit","termid":"MONDO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival pigmentation","secondary_identifiers":["UMLS:C0155163","DOID:12304","ICD9:372.55","SCTID:66081003","MEDGEN:509823"],"termid":"MONDO:0006537","xrefs":{"Monarch":{"xref_id":"0006537"}}}


id: PBO:0068434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 4","termid":"PBO:0068434"}


id: GO:0047567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methyloxindole + NADP+ = 3-methyleneoxindole + H+ + NADPH.","definition_xrefs":["RHEA:20257","EC:1.3.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-methyleneoxindole reductase activity","secondary_identifiers":["MetaCyc:3-METHYLENEOXINDOLE-REDUCTASE-RXN","KEGG_REACTION:R03930"],"synonyms":[{"name":"3-methyl-1,3-dihydroindol-2-one:NADP+ oxidoreductase activity","type":"related"},{"name":"3-methyloxindole:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047567"}


id: PBO:0050945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 17","termid":"PBO:0050945"}


id: GO:0004503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + O2 = L-DOPAquinone + H2O. This reaction can use both monophenols (such as tyrosine) and catechols (o-diphenols) as substrates.","definition_xrefs":["RHEA:18117","PMID:4965136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tyrosinase activity","secondary_identifiers":["MetaCyc:MONOPHENOL-MONOOXYGENASE-RXN","EC:1.14.18.1"],"synonyms":[{"name":"L-tyrosine monooxygenase activity","type":"exact"},{"name":"N-acetyl-6-hydroxytryptophan oxidase activity","type":"related"},{"name":"catecholase","type":"related"},{"name":"chlorogenic acid oxidase activity","type":"related"},{"name":"chlorogenic oxidase activity","type":"related"},{"name":"cresolase activity","type":"related"},{"name":"dopa oxidase","type":"related"},{"name":"monophenol monooxidase activity","type":"related"},{"name":"monophenol monooxygenase activity","type":"exact"},{"name":"monophenol oxidase activity","type":"related"},{"name":"monophenol oxygenase","type":"exact"},{"name":"monophenolase activity","type":"related"},{"name":"o-diphenol oxidase activity","type":"related"},{"name":"o-diphenol oxidoreductase","type":"related"},{"name":"o-diphenol:O2 oxidoreductase activity","type":"related"},{"name":"phenol oxidase activity","type":"broad"},{"name":"phenolase activity","type":"broad"},{"name":"prophenol oxidase activity","type":"related"},{"name":"prophenoloxidase activity","type":"related"},{"name":"pyrocatechol oxidase","type":"broad"},{"name":"tyrosine-dopa oxidase activity","type":"related"}],"termid":"GO:0004503"}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: PBO:0090683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rer1 family protein","termid":"PBO:0090683"}


id: PBO:0029721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_galactomannan_level","termid":"PBO:0029721"}


id: PBO:0027433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_arrest_at_rDNA_repeats","termid":"PBO:0027433"}


id: PBO:0016895
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae KNS1","termid":"PBO:0016895"}


id: PBO:0090345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop5","termid":"PBO:0090345"}


id: PBO:0048105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTX transcript, XIST regulator","termid":"PBO:0048105"}


id: PBO:0054618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2023","termid":"PBO:0054618"}


id: MONDO:0005148
data:
  {"annotated_genes":["SJAG_02013","SJAG_02426","SJAG_04394","SJAG_04334","SJAG_00214","SJAG_04495","SJAG_02000","SJAG_04206","SJAG_00092","SJAG_02012"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85490,85491,85492,85493,85494,87619,87620,87621],"is_not":false,"summary":null,"term":"MONDO:0005148"},{"annotations":[87693,87694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"}]},"cv_name":"mondo","definition":"A type of diabetes mellitus that is characterized by insulin resistance or desensitization and increased blood glucose levels. This is a chronic disease that can develop gradually over the life of a patient and can be linked to both environmental factors and heredity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus","termid":"MONDO:0005015"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005015","MONDO:0004335"],"is_obsolete":false,"name":"type 2 diabetes mellitus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26747","DOID:9352","UMLS:C0011860","OMIM:125853","MESH:D003924","SCTID:44054006","MEDGEN:41523","NANDO:2200461","icd11.foundation:119724091"],"synonyms":[{"name":"NIDDM","type":"exact"},{"name":"T2D","type":"exact"},{"name":"T2DM","type":"exact"},{"name":"T2DM - type 2 diabetes mellitus","type":"exact"},{"name":"adult onset diabetes","type":"exact"},{"name":"adult-onset diabetes","type":"exact"},{"name":"diabetes mellitis type 2","type":"exact"},{"name":"diabetes mellitis type II","type":"exact"},{"name":"diabetes mellitus, non-insulin-dependent, susceptibility to","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, 2","type":"narrow"},{"name":"diabetes mellitus, noninsulin-dependent, association with","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, late onset","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, susceptibility to","type":"related"},{"name":"diabetes mellitus, type 2","type":"exact"},{"name":"diabetes mellitus, type 2, protection against","type":"related"},{"name":"diabetes mellitus, type 2, susceptibility to","type":"related"},{"name":"diabetes mellitus, type II","type":"exact"},{"name":"diabetes mellitus, type II, susceptibility to","type":"related"},{"name":"diabetes, type 2","type":"exact"},{"name":"hypertension, insulin resistance-related, susceptibility to","type":"related"},{"name":"insulin resistance, severe, digenic","type":"exact"},{"name":"insulin resistance, susceptibility to","type":"related"},{"name":"maturity-onset diabetes","type":"related"},{"name":"non-insulin dependent diabetes","type":"exact"},{"name":"non-insulin dependent diabetes mellitus","type":"exact"},{"name":"non-insulin-dependent diabetes mellitus","type":"exact"},{"name":"noninsulin dependent diabetes","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus","type":"exact"},{"name":"type 2 diabetes","type":"exact"},{"name":"type 2 diabetes mellitus","type":"exact"},{"name":"type 2 diabetes mellitus non-insulin dependent","type":"exact"},{"name":"type 2 diabetes mellitus, susceptibility to","type":"related"},{"name":"type II diabetes","type":"exact"},{"name":"type II diabetes mellitus","type":"exact"}],"termid":"MONDO:0005148","terms_by_termid":{"MONDO:0005148":null,"MONDO:0014488":null},"xrefs":{"Monarch":{"xref_id":"0005148"}}}


id: PBO:0086540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR001W is not an essential gene","termid":"PBO:0086540"}


id: GO:1900438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to chemical stimulus","type":"narrow"}],"termid":"GO:1900438"}


id: MONDO:0010390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular albinism with late-onset sensorineural deafness (OASD), is a rare, X-linked inherited type of ocular albinism described in one African kindred (7 males over 3 generations) to date, characterized by severe visual impairment, translucent pale-blue iridies, a reduction in the retinal pigment and moderately severe deafness by middle age (fourth to fifth decade of life). It is unclear whether it is allelic to X-linked recessive ocular albinism or a contiguous gene syndrome.","definition_xrefs":["Orphanet:1000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ocular albinism with late-onset sensorineural deafness","secondary_identifiers":["SCTID:722054007","OMIM:300650","UMLS:C1845069","GARD:592","MEDGEN:337149"],"synonyms":[{"name":"OASD","type":"related"},{"name":"albinism ocular late onset sensorineural deafness","type":"related"},{"name":"albinism, ocular, with late-onset sensorineural deafness","type":"related"},{"name":"deafness and ocular albinism","type":"related"},{"name":"ocular albinism with sensorineural deafness","type":"related"}],"termid":"MONDO:0010390","xrefs":{"Monarch":{"xref_id":"0010390"}}}


id: PBO:0078431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-1","termid":"PBO:0078431"}


id: MONDO:0016061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement factor H deficiency","termid":"MONDO:0012350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immunodeficiency with factor H anomaly","secondary_identifiers":["icd11.foundation:946399055","Orphanet:200421","GARD:17099"],"termid":"MONDO:0016061","xrefs":{"Monarch":{"xref_id":"0016061"}}}


id: MONDO:0015598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrodermatitis continua suppurativa of Hallopeau (obsolete MONDO:0015598)","termid":"MONDO:0015598","xrefs":{"Monarch":{"xref_id":"0015598"}}}


id: PBO:0076254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic vesicle glycoprotein 2C","termid":"PBO:0076254"}


id: GO:1900051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone exchange.","definition_xrefs":["GOC:TermGenie","PMID:20332092"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone exchange (obsolete GO:1900051)","synonyms":[{"name":"activation of histone chaperone","type":"related"},{"name":"activation of histone exchange","type":"related"},{"name":"activation of histone replacement","type":"exact"},{"name":"positive regulation of histone chaperone","type":"related"},{"name":"positive regulation of histone replacement","type":"exact"},{"name":"up regulation of histone chaperone","type":"related"},{"name":"up regulation of histone exchange","type":"related"},{"name":"up regulation of histone replacement","type":"exact"},{"name":"up-regulation of histone chaperone","type":"related"},{"name":"up-regulation of histone exchange","type":"related"},{"name":"up-regulation of histone replacement","type":"exact"},{"name":"upregulation of histone chaperone","type":"related"},{"name":"upregulation of histone exchange","type":"related"},{"name":"upregulation of histone replacement","type":"exact"}],"termid":"GO:1900051"}


id: GO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its symbiont's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by host of symbiont vascular system (obsolete GO:0052494)","termid":"GO:0052494"}


id: MOD:00517
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"},{"name":"NeuAc-Hex-HexNAc","type":"exact"}],"termid":"MOD:00517"}


id: PBO:0060005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 25","termid":"PBO:0060005"}


id: PBO:0071209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 50","termid":"PBO:0071209"}


id: GO:0061843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tissue remodeling process by which the Sertoli cell barrier is temporarily disrupted and reorganized to accommodate the transit of preleptotene spermatocytes at stage VIII of the epithelial cycle.","definition_xrefs":["PMID:20534520","PMID:24467744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell barrier remodeling","synonyms":[{"name":"SCB remodeling","type":"exact"},{"name":"Sertoli cell barrier remodelling","type":"exact"},{"name":"Sertoli cell barrier restructuring","type":"exact"},{"name":"blood testis barrier restructuring","type":"broad"},{"name":"restructuring of BTB","type":"broad"},{"name":"restructuring of SCB","type":"exact"},{"name":"restructuring of blood-testis barrier","type":"broad"}],"termid":"GO:0061843"}


id: GO:0098541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the trans-Golgi network transport vesicle membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of transport vesicle membrane","termid":"GO:0098539"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle membrane","termid":"GO:0012510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of trans-Golgi network transport vesicle membrane","synonyms":[{"name":"external side of trans-Golgi network transport vesicle membrane","type":"exact"}],"termid":"GO:0098541"}


id: PBO:0058650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6779","termid":"PBO:0058650"}


id: MOD:01910
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one fluorine atom.","definition_xrefs":["Unimod:127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorinated residue","termid":"MOD:00498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monofluorinated residue","synonyms":[{"name":"F1Res","type":"exact"}],"termid":"MOD:01910"}


id: FYPO:0006191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and some of the protein is present in the cytoplasm instead, during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","termid":"FYPO:0004056"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during mitosis","termid":"FYPO:0005672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization in nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"}],"termid":"FYPO:0006191"}


id: PBO:0067239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 310, pseudogene","termid":"PBO:0067239"}


id: PBO:0116780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 7 (gene/pseudogene)","termid":"PBO:0116780"}


id: PBO:0048162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 7","termid":"PBO:0048162"}


id: PBO:0092010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA binding endonuclease Cox1-I1b (intron-encoded)","termid":"PBO:0092010"}


id: MONDO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete preimplantation embryonic lethality (obsolete MONDO:0000218)","secondary_identifiers":["OMIMPS:616814"],"termid":"MONDO:0000218","xrefs":{"Monarch":{"xref_id":"0000218"}}}


id: FYPO:0002090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during nuclear division, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"lagging chromosomes","synonyms":[{"name":"chromosome segregation defects, lagging chromosomes","type":"exact"}],"termid":"FYPO:0002090"}


id: GO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of platelet activating factor following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activating factor production involved in inflammatory response","secondary_identifiers":["GO:0002535","GO:0002390","GO:0002392"],"synonyms":[{"name":"platelet activating factor production","type":"related"},{"name":"platelet activating factor production involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion","type":"narrow"},{"name":"platelet activating factor secretion involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion involved in inflammatory response","type":"narrow"}],"termid":"GO:0002391"}


id: PBO:0025508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6 (predicted)","termid":"PBO:0025508"}


id: PBO:0036221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arginase_activity","termid":"PBO:0036221"}


id: GO:0019630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving quinate, the anion of quinic acid. The acid occurs commonly in plants, either free or as esters, and is used as a medicine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"quinate metabolic process","synonyms":[{"name":"quinate metabolism","type":"exact"},{"name":"quinic acid metabolic process","type":"exact"},{"name":"quinic acid metabolism","type":"exact"}],"termid":"GO:0019630"}


id: PBO:0110024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku70 (human XRCC6 ortholog) Pku70","termid":"PBO:0110024"}


id: GO:1900477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of G1/S transition of mitotic cell cycle by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:19841732","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900477)","termid":"GO:1900477"}


id: PBO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase (predicted)","termid":"PBO:0000259"}


id: GO:0033265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to choline, the amine 2-hydroxy-N,N,N-trimethylethanaminium.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"choline binding","termid":"GO:0033265"}


id: FYPO:0001179
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"},{"annotations":[119583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119572,119584,119573,119580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from, a place where it is normally found in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01143":null,"SJAG_01665":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03892":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_03892","SJAG_01050","SJAG_01143"],"name":"abolished protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation during vegetative growth","type":"exact"},{"name":"abolished protein localization during mitotic cell cycle","type":"related"},{"name":"protein absent from specific location in cell during vegetative growth","type":"related"},{"name":"protein localization abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001179","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001132":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: MONDO:0019638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia is a form of renal malformation in which the kidney(s) are present but their development is abnormal and incomplete. Renal dysplasia can be unilateral or bilateral, segmental, and of variable severity, with renal aplasia corresponding to extreme dysplasia.","definition_xrefs":["Orphanet:93108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal dysplasia","secondary_identifiers":["GARD:19173","HP:0000110","MEDGEN:760690","NANDO:2200161","UMLS:C3536714","icd11.foundation:921320354"],"synonyms":[{"name":"renal dysplasia","type":"exact"},{"name":"renal dysplasia (disease)","type":"exact"}],"termid":"MONDO:0019638","xrefs":{"Monarch":{"xref_id":"0019638"}}}


id: PBO:0052674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 42","termid":"PBO:0052674"}


id: PBO:0070291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 32","termid":"PBO:0070291"}


id: PBO:0053126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LCORL pseudogene 1","termid":"PBO:0053126"}


id: MONDO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hereditary, primary immunodeficiency due to a complement cascade protein anomaly characterized by significantly increased susceptibility to Neisseria species infections. It only affects males, typically presenting with severe or fulminant meningococcal disease.","definition_xrefs":["Orphanet:2966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"properdin deficiency, X-linked","secondary_identifiers":["MESH:C537241","DOID:0111768","OMIM:312060","MEDGEN:333322","ICD9:279.8","UMLS:C1839454","GARD:4513","SCTID:81166004","NANDO:2200789"],"synonyms":[{"name":"CFPD","type":"related"},{"name":"PFD","type":"related"},{"name":"complement Factor properdin deficiency","type":"related"},{"name":"properdin P Factor deficiency","type":"related"},{"name":"properdin deficiency, X-linked","type":"exact"},{"name":"properdin deficiency, X-linked, X-linked recessive","type":"exact"},{"name":"properdin deficiency, type 1","type":"related"},{"name":"properdin deficiency, type 2","type":"related"},{"name":"properdin deficiency, type 3","type":"related"}],"termid":"MONDO:0010713","xrefs":{"Monarch":{"xref_id":"0010713"}}}


id: PBO:0048527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 2 pseudogene 2","termid":"PBO:0048527"}


id: GO:0051816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The production of structures and/or molecules in an organism that are required for the acquisition and/or utilization of nutrients obtained from a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete acquisition of nutrients from other organism during symbiotic interaction (obsolete GO:0051816)","termid":"GO:0051816"}


id: MONDO:1010576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, horse","secondary_identifiers":["OMIA:000279-9796"],"termid":"MONDO:1010576","xrefs":{"Monarch":{"xref_id":"1010576"}}}


id: MONDO:0003670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An electrocardiographic finding of an injury in leads corresponding to the anatomic region of the posteroinferior wall of the heart.","definition_xrefs":["NCIT:C36068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"posteroinferior myocardial infarction","secondary_identifiers":["DOID:5843","MEDGEN:216044","UMLS:C1142433"],"synonyms":[{"name":"posteroinferior myocardial infarction by ECG finding","type":"exact"},{"name":"posteroinferior myocardial infarction by EKG finding","type":"exact"}],"termid":"MONDO:0003670","xrefs":{"Monarch":{"xref_id":"0003670"}}}


id: MOD:01170
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively forms a 2-ketoimine of pyruvicacid with a residue amino group.","definition_xrefs":["Unimod:422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid iminylated residue","synonyms":[{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:01170"}


id: MONDO:0022471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aortic valve stenosis","termid":"MONDO:0042981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"childhood aortic valve stenosis","secondary_identifiers":["GARD:744"],"synonyms":[{"name":"aortic valves stenosis of the child","type":"related"}],"termid":"MONDO:0022471","xrefs":{"Monarch":{"xref_id":"0022471"}}}


id: MONDO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Replacement of the lung tissue by connective tissue in a specific area of the lung.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized pulmonary fibrosis","secondary_identifiers":["SCTID:233726000","DOID:5642","MEDGEN:137936","NCIT:C27103","UMLS:C0340127"],"termid":"MONDO:0003564","xrefs":{"Monarch":{"xref_id":"0003564"}}}


id: PBO:0018195
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe PNuts","termid":"PBO:0018195"}


id: PBO:0028225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_cellular_response_to_salt_stress","termid":"PBO:0028225"}


id: GO:0060689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the cells of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"salivary gland development","termid":"GO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}


id: GO:0031096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the platelet dense tubular network.","definition_xrefs":["GOC:mah","PMID:1322202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"platelet dense tubular network","termid":"GO:0031094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"platelet dense tubular network lumen","termid":"GO:0031096"}


id: PBO:0056328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K9 divergent transcript","termid":"PBO:0056328"}


id: PBO:0081685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF606 antisense RNA 1","termid":"PBO:0081685"}


id: MONDO:0002437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia resulting from dehydration.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"dehydration polycythemia","secondary_identifiers":["NCIT:C27310","MEDGEN:163544","UMLS:C0856815","DOID:2833"],"termid":"MONDO:0002437","xrefs":{"Monarch":{"xref_id":"0002437"}}}


id: GO:0051775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah","PMID:16987039","PMID:15131240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to redox state","secondary_identifiers":["GO:0006980"],"synonyms":[{"name":"redox signal response","type":"exact"}],"termid":"GO:0051775"}


id: PATO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant that exists at the cellular level of organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular quality","termid":"PATO:0001396"}


id: GO:0047145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-demethylsterigmatocystin + S-adenosyl-L-methionine = sterigmatocystin + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:2.1.1.109-RXN","EC:2.1.1.109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"demethylsterigmatocystin 6-O-methyltransferase activity","secondary_identifiers":["RHEA:11504"],"synonyms":[{"name":"O-methyltransferase I","type":"related"},{"name":"S-adenosyl-L-methionine:6-demethylsterigmatocystin 6-O-methyltransferase activity","type":"related"},{"name":"demethylsterigmatocystin methyltransferase activity","type":"related"}],"termid":"GO:0047145"}


id: PBO:0058860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8089","termid":"PBO:0058860"}


id: MONDO:0030116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Silver-Russell syndrome","termid":"MONDO:0008394"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silver-russell syndrome 2","secondary_identifiers":["UMLS:C5394446","OMIM:618905","MEDGEN:1714148"],"synonyms":[{"name":"SILVER-RUSSELL SYNDROME 2","type":"exact"},{"name":"SRS2","type":"exact"},{"name":"Uniparental Disomy, Maternal, Chromosome 7","type":"exact"},{"name":"silver-russell syndrome 2","type":"exact"}],"termid":"MONDO:0030116","xrefs":{"Monarch":{"xref_id":"0030116"}}}


id: PBO:0069592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 866, pseudogene","termid":"PBO:0069592"}


id: GO:0042608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a T cell receptor, the antigen-recognizing receptor on the surface of T cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"T cell receptor binding","synonyms":[{"name":"T lymphocyte receptor binding","type":"exact"},{"name":"T-cell receptor binding","type":"exact"},{"name":"T-lymphocyte receptor binding","type":"exact"},{"name":"TCR binding","type":"exact"}],"termid":"GO:0042608"}


id: PBO:0073882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 11 member 2","termid":"PBO:0073882"}


id: MONDO:1010214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-hodgkin lymphoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-hodgkin lymphoma, non-human animal","secondary_identifiers":["OMIA:001708"],"termid":"MONDO:1010214","xrefs":{"Monarch":{"xref_id":"1010214"}}}


id: GO:0048824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a pigment cell precursor.","definition_xrefs":["GOC:dgh","PMID:16499899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment cell precursor differentiation","synonyms":[{"name":"chromatophore precursor differentiation","type":"exact"}],"termid":"GO:0048824"}


id: FYPO:0004681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature polyadenylated 5.8S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature 5.8S rRNA level","termid":"FYPO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased polyadenylated 5.8S rRNA level","synonyms":[{"name":"decreased 5.8S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA accumulation","type":"related"},{"name":"decreased polyadenylated 5.8S rRNA level during vegetative growth","type":"exact"},{"name":"decreased polyadenylated 5.8S rRNA transcript level","type":"exact"},{"name":"reduced polyadenylated 5.8S rRNA level","type":"exact"}],"termid":"FYPO:0004681"}


id: MONDO:0017133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic systemic or rheumatologic disease (obsolete MONDO:0017133)","termid":"MONDO:0017133","xrefs":{"Monarch":{"xref_id":"0017133"}}}


id: GO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate biosynthetic process","synonyms":[{"name":"2-deoxyribose 1-phosphate anabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate biosynthesis","type":"exact"},{"name":"2-deoxyribose 1-phosphate formation","type":"exact"},{"name":"2-deoxyribose 1-phosphate synthesis","type":"exact"}],"termid":"GO:0006016"}


id: PBO:0027887
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H4-K20_monomethylation","termid":"PBO:0027887"}


id: GO:0060087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A negative regulation of smooth muscle contraction resulting in relaxation of vascular smooth muscle. The relaxation is mediated by a decrease in the phosphorylation state of myosin light chain. This can be achieved by removal of calcium from the cytoplasm to the sarcoplasmic reticulum lumen through the action of Ca2+ ATPases leading to a decrease myosin light chain kinase activity, and through calcium-independent pathways leading to a increase in myosin light chain phosphatase activity.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:dph","GOC:TermGenie","PMID:15867178","PMID:19996365","PMID:27389411","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of smooth muscle","termid":"GO:0044557"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"part_of","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of vascular associated smooth muscle","secondary_identifiers":["GO:1905657","GO:1905658","GO:1905659"],"synonyms":[{"name":"negative regulation of relaxation of vascular smooth muscle","type":"related"},{"name":"positive regulation of relaxation of vascular smooth muscle","type":"related"},{"name":"regulation of relaxation of vascular smooth muscle","type":"related"},{"name":"relaxation of vascular smooth muscle","type":"exact"},{"name":"vascular smooth muscle relaxation","type":"exact"}],"termid":"GO:0060087"}


id: PBO:0066073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 1","termid":"PBO:0066073"}


id: FYPO:0008101
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of tRNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level","termid":"FYPO:0005999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"}


id: MONDO:0007973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mental and growth retardation with amblyopia","secondary_identifiers":["MESH:C563591","OMIM:156190","UMLS:C1835028","MEDGEN:331885"],"synonyms":[{"name":"mental and growth retardation with amblyopia","type":"exact"}],"termid":"MONDO:0007973","xrefs":{"Monarch":{"xref_id":"0007973"}}}


id: PR:Q9UUI2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small histone ubiquitination factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.12c","synonyms":[{"name":"Spom972h-shf1","type":"exact"}],"termid":"PR:Q9UUI2"}


id: MONDO:0014065
data:
  {"annotated_genes":["SJAG_00080"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85485],"is_not":false,"summary":null,"term":"MONDO:0014065"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the UQCRQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:767521","OMIM:615159","UMLS:C3554607","GARD:15912","DOID:0080113"],"synonyms":[{"name":"MC3DN4","type":"related"},{"name":"UQCRQ mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in UQCRQ","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 4","type":"related"}],"termid":"MONDO:0014065","terms_by_termid":{"MONDO:0014065":null},"xrefs":{"Monarch":{"xref_id":"0014065"}}}


id: GO:0030973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdate ion (MoO4 2-).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"molybdate ion binding","synonyms":[{"name":"MoO4 ion binding","type":"exact"}],"termid":"GO:0030973"}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: PBO:0061046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA like domain containing 2","termid":"PBO:0061046"}


id: PBO:0089410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transmembrane transporter","termid":"PBO:0089410"}


id: PBO:0043754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 2","termid":"PBO:0043754"}


id: PBO:0066281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member E, pseudogene","termid":"PBO:0066281"}


id: PR:Q9P7L8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7L8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.05","synonyms":[{"name":"Spom972h-sap62","type":"exact"},{"name":"spliceosome-associated protein 62 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L8"}


id: MONDO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long qt syndrome 8","secondary_identifiers":["OMIM:618447","DOID:0110649"],"synonyms":[{"name":"LONG QT SYNDROME 8","type":"related"},{"name":"LQT8","type":"related"}],"termid":"MONDO:0032756","xrefs":{"Monarch":{"xref_id":"0032756"}}}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:BHF","GOC:dos","GOC:rl","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: PBO:0058205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4498","termid":"PBO:0058205"}


id: GO:0042161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of one or more amino acids or the lipid group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein modification","termid":"GO:0042160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein oxidation","termid":"GO:0042161"}


id: GO:0004864
data:
  {"annotated_genes":["SJAG_02380","SJAG_04627","SJAG_03272","SJAG_04999","SJAG_03309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70568,89721],"is_not":false,"summary":null,"term":"GO:0004864"},{"annotations":[74987,76342,88194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a protein phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase inhibitor activity","termid":"GO:0019212"},{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"},{"relation_name":"negatively_regulates","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_04627":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0016788"},{"rel_name":"negatively_regulates","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0004721","GO:0016787","GO:0003674","GO:0003824","GO:0030234","GO:0016788","GO:0098772","GO:0004857","GO:0140678","GO:0140096"],"is_obsolete":false,"name":"protein phosphatase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990681"],"synonyms":[{"name":"phosphoprotein phosphatase inhibitor activity","type":"exact"},{"name":"protein phosphatase 2 inhibitor activity","type":"narrow"},{"name":"protein phosphatase type 2A inhibitor activity","type":"narrow"}],"termid":"GO:0004864","terms_by_termid":{"GO:0004864":null,"GO:0004865":null}}


id: PBO:0074334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAL1 antisense RNA 1","termid":"PBO:0074334"}


id: POMBASE_GENE_EX_REL:not_exists_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_exists_during","termid":"POMBASE_GENE_EX_REL:not_exists_during"}


id: PBO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ domain","termid":"PBO:0001026"}


id: PBO:0077316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 52","termid":"PBO:0077316"}


id: MONDO:0018766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic enteropathy associated with SLCO2A1 gene","secondary_identifiers":["NANDO:2200925","UMLS:C5568838","NANDO:2100261","MEDGEN:1800261","Orphanet:468641","GARD:21946"],"synonyms":[{"name":"CEAS","type":"exact"}],"termid":"MONDO:0018766","xrefs":{"Monarch":{"xref_id":"0018766"}}}


id: PBO:0047820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O1","termid":"PBO:0047820"}


id: PBO:0043544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type I alpha 1 chain","termid":"PBO:0043544"}


id: MONDO:0007077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tietz syndrome is a genetic hypopigmentation and deafness syndrome characterized by congenital profound bilateral sensorineural hearing loss and generalized albino-like hypopigmentation of skin, eyes and hair.","definition_xrefs":["Orphanet:42665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"Tietz syndrome","secondary_identifiers":["DOID:0090002","OMIM:103500","UMLS:C0391816","ICD9:270.2","GARD:7772","MESH:C536919","SCTID:403805009","MEDGEN:98213"],"synonyms":[{"name":"TADS","type":"related"},{"name":"Tietz albinism-deafness syndrome","type":"exact"},{"name":"Tietz syndrome","type":"exact"},{"name":"albinism-deafness of Tietz","type":"exact"},{"name":"hypopigmentation-deafness syndrome","type":"exact"},{"name":"hypopigmentation/deafness of Tietz","type":"exact"}],"termid":"MONDO:0007077","xrefs":{"Monarch":{"xref_id":"0007077"}}}


id: GO:0090201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"negatively_regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of release of cytochrome c from mitochondria","termid":"GO:0090201"}


id: PBO:0059119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1","termid":"PBO:0059119"}


id: PBO:0061038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA magnesium transporter 1","termid":"PBO:0061038"}


id: GO:0036155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of an acylglycerol, through sequential deacylation and re-acylation reactions, to generate an acylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["PMID:15364929","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"acylglycerol acyl-chain remodeling","secondary_identifiers":["Reactome:R-HSA-1482883"],"synonyms":[{"name":"acylglycerol acyl-chain remodelling","type":"exact"},{"name":"glyceride acyl-chain remodeling","type":"exact"}],"termid":"GO:0036155"}


id: PBO:0012569
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae YPT1","termid":"PBO:0012569"}


id: PBO:0069449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 714, pseudogene","termid":"PBO:0069449"}


id: PBO:0114662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductase Pbr1, implicated in lipid metabolism, or protein glycosylation","termid":"PBO:0114662"}


id: MONDO:0007146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apnea, central sleep (obsolete MONDO:0007146)","termid":"MONDO:0007146","xrefs":{"Monarch":{"xref_id":"0007146"}}}


id: GO:0016801
data:
  {"annotated_genes":["SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004301"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any ether or thioether bond, -O- or -S- respectively.","definition_xrefs":["GOC:jl","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on ether bonds","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.3.-.-"],"termid":"GO:0016801","terms_by_termid":{"GO:0004301":null}}


id: PBO:0088201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains","termid":"PBO:0088201"}


id: MONDO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A chondrosarcoma that is located in exclusively soft tissue.","definition_xrefs":["DOID:4549","PMID:16084955"],"gene_count":0,"genotype_count":0,"name":"obsolete extraosseous chondrosarcoma (obsolete MONDO:0003044)","termid":"MONDO:0003044","xrefs":{"Monarch":{"xref_id":"0003044"}}}


id: FYPO:0005743
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of invertase activity (beta-fructofuranosidase activity) is normal (i.e. indistinguishable from wild type) under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal invertase activity during glucose starvation","synonyms":[{"name":"normal beta-fructofuranosidase activity during glucose starvation","type":"exact"},{"name":"normal invertase activity during cellular response to glucose starvation","type":"exact"},{"name":"normal invertase activity during glucose depletion","type":"exact"},{"name":"normal invertase activity during glucose deprivation","type":"exact"},{"name":"normal invertase activity during glucose limitation","type":"related"}],"termid":"FYPO:0005743"}


id: PBO:0003207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wings apart-like homolog Wpl1","termid":"PBO:0003207"}


id: GO:0071264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of deprivation of nourishment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to starvation","termid":"GO:0071262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational initiation in response to starvation","synonyms":[{"name":"activation of translation initiation in response to starvation","type":"narrow"},{"name":"positive regulation of translational initiation in response to nutrient starvation","type":"exact"},{"name":"stimulation of translation initiation in response to starvation","type":"narrow"},{"name":"up regulation of translation initiation in response to starvation","type":"exact"},{"name":"up-regulation of translation initiation in response to starvation","type":"exact"},{"name":"upregulation of translation initiation in response to starvation","type":"exact"}],"termid":"GO:0071264"}


id: GO:0005157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"M-CSF receptor binding","type":"exact"},{"name":"macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005157"}


id: GO:0006330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete single-stranded DNA binding (obsolete GO:0006330)","synonyms":[{"name":"single-stranded DNA binding","type":"exact"}],"termid":"GO:0006330"}


id: PBO:0049605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 8","termid":"PBO:0049605"}


id: PBO:0027993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_exit_from_mitosis","termid":"PBO:0027993"}


id: PBO:0082252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the translation initiation factor eIF2; eIF2 is involved in identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP; protein abundance increases in response to DNA replication stress","termid":"PBO:0082252"}


id: PBO:0043273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member B","termid":"PBO:0043273"}


id: MONDO:0018288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with hepatic involvement (obsolete MONDO:0018288)","secondary_identifiers":["Orphanet:371157"],"synonyms":[{"name":"CDG with hepatic involvement","type":"exact"}],"termid":"MONDO:0018288","xrefs":{"Monarch":{"xref_id":"0018288"}}}


id: GO:0031449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:ef","GOC:mah","GOC:mtg_muscle","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"},{"relation_name":"regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031449"}


id: GO:0060412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a ventricular septum is generated and organized. A ventricular septum is an anatomical structure that separates the lower chambers (ventricles) of the heart from one another.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"ventricular septum development","termid":"GO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum morphogenesis","synonyms":[{"name":"interventricular septum morphogenesis","type":"exact"}],"termid":"GO:0060412"}


id: GO:1900424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to bacterium.","definition_xrefs":["GOC:TermGenie","PMID:22346749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to bacterium","secondary_identifiers":["GO:1902477"],"synonyms":[{"name":"regulation of antibacterial peptide activity","type":"related"},{"name":"regulation of defence response to bacteria","type":"exact"},{"name":"regulation of defence response to bacterium","type":"exact"},{"name":"regulation of defence response to bacterium, incompatible interaction","type":"narrow"},{"name":"regulation of defence response to pathogenic bacteria, incompatible interaction","type":"narrow"},{"name":"regulation of defence response to pathogenic bacterium, incompatible interaction","type":"narrow"},{"name":"regulation of defense response to bacteria","type":"exact"},{"name":"regulation of defense response to bacterium, incompatible interaction","type":"narrow"},{"name":"regulation of resistance response to pathogenic bacteria","type":"narrow"},{"name":"regulation of resistance response to pathogenic bacterium","type":"narrow"}],"termid":"GO:1900424"}


id: PBO:0073207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEMA3F antisense RNA 1","termid":"PBO:0073207"}


id: GO:2000149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in ventricular septum morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in ventricular septum morphogenesis (obsolete GO:2000149)","termid":"GO:2000149"}


id: PBO:0080259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 22 pseudogene","termid":"PBO:0080259"}


id: GO:0098520
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible for muscle contraction.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"},{"relation_name":"is_a","term_name":"excitatory synapse","termid":"GO:0060076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"excitatory neuromuscular junction","termid":"GO:0098520"}


id: GO:0044771
data:
  {"annotated_genes":["SJAG_00145","SJAG_03327","SJAG_00100","SJAG_00666","SJAG_00364","SJAG_04287","SJAG_04259","SJAG_01082","SJAG_04280","SJAG_03854","SJAG_04126","SJAG_01330","SJAG_02771","SJAG_04332","SJAG_01515","SJAG_04853","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106636,114799],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[99017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990946"},{"annotations":[106932,116358,91769],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[116966,75747],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[99018,100461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[100462,102606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[78836,70953],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[99019],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[73890],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"},{"annotations":[114090],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[95494],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[101658],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[108673],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901993"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell commits to entering the next meiotic cell cycle phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00145":null,"SJAG_00364":null,"SJAG_00666":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_02771":null,"SJAG_03327":null,"SJAG_03854":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cell cycle transition","type":"broad"}],"termid":"GO:0044771","terms_by_termid":{"GO:0033315":null,"GO:0033316":null,"GO:0110031":null,"GO:0110032":null,"GO:1901993":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990946":null,"GO:1990949":null,"GO:1990950":null}}


id: SO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"First codon to be translated by a ribosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"start_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Start_codon"],"synonyms":[{"name":"initiation codon","type":"exact"},{"name":"start codon","type":"exact"}],"termid":"SO:0000318"}


id: PBO:0029523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029523"}


id: MONDO:0016797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A mitochondrial oxidative phosphorylation disorder in which mitochondrial DNA (mtDNA) level is lower than normal.","definition_xrefs":["PMID:24266892"],"gene_count":0,"genotype_count":0,"name":"obsolete multiple mitochondrial DNA deletion syndrome (obsolete MONDO:0016797)","secondary_identifiers":["Orphanet:254807","icd11.foundation:194083556"],"synonyms":[{"name":"multiple mtDNA deletion syndrome","type":"exact"}],"termid":"MONDO:0016797","xrefs":{"Monarch":{"xref_id":"0016797"}}}


id: PBO:0039848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP15 antisense RNA 1","termid":"PBO:0039848"}


id: PBO:0085842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus; protein abundance increases in response to DNA replication stress","termid":"PBO:0085842"}


id: GO:1902568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of eosinophil activation.","definition_xrefs":["PMID:16254138","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte activation","termid":"GO:0002696"},{"relation_name":"is_a","term_name":"regulation of eosinophil activation","termid":"GO:1902566"},{"relation_name":"positively_regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eosinophil activation","synonyms":[{"name":"activation of eosinophil activation","type":"narrow"},{"name":"up regulation of eosinophil activation","type":"exact"},{"name":"up-regulation of eosinophil activation","type":"exact"},{"name":"upregulation of eosinophil activation","type":"exact"}],"termid":"GO:1902568"}


id: MONDO:0014638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the UBE2T gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group T","secondary_identifiers":["GARD:16111","OMIM:616435","UMLS:C4084840","DOID:0111081","MEDGEN:896157"],"synonyms":[{"name":"FANCT","type":"exact"},{"name":"Fanconi Anemia, complementation group type T","type":"exact"},{"name":"Fanconi anaemia caused by mutation in UBE2T","type":"exact"},{"name":"Fanconi anaemia complementation group type T","type":"exact"},{"name":"Fanconi anemia caused by mutation in UBE2T","type":"exact"},{"name":"Fanconi anemia complementation group type T","type":"exact"},{"name":"Fanconi anemia, complementation group T","type":"related"},{"name":"UBE2T Fanconi anaemia","type":"exact"},{"name":"UBE2T Fanconi anemia","type":"exact"}],"termid":"MONDO:0014638","xrefs":{"Monarch":{"xref_id":"0014638"}}}


id: PBO:0066013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA guanine-7 methyltransferase activating subunit like","termid":"PBO:0066013"}


id: PBO:0031380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell","termid":"PBO:0031380"}


id: PBO:0060528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 1","termid":"PBO:0060528"}


id: PBO:0081909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 876, pseudogene","termid":"PBO:0081909"}


id: PBO:0042682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein delta","termid":"PBO:0042682"}


id: GO:1990408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular calcitonin gene-related peptide (CGRP) combining with a calcitonin gene-related peptide receptor on the surface of the target cell. Calcitonin gene-related peptide receptors may form dimers, trimers or tetramers.","definition_xrefs":["PMID:10882736","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor signaling pathway","termid":"GO:0097646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcitonin gene-related peptide receptor signaling pathway","synonyms":[{"name":"CGRP receptor signaling pathway","type":"exact"},{"name":"calcitonin-gene-related peptide receptor signaling pathway","type":"exact"},{"name":"calcitonin-gene-related polypeptide receptor signaling pathway","type":"exact"}],"termid":"GO:1990408"}


id: PBO:0071059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 61","termid":"PBO:0071059"}


id: GO:1903789
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_02605","SJAG_03591","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[93675,92081,99204,110850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[92082,93676,99205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amino acid transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16115814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"amino acid transmembrane transport","termid":"GO:0003333"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of amino acid membrane transport","type":"exact"}],"termid":"GO:1903789","terms_by_termid":{"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA-RNA complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex organization","synonyms":[{"name":"protein-DNA-RNA complex subunit organisation","type":"exact"}],"termid":"GO:0001115"}


id: FYPO:0001078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of beta-D-glucan measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal polysaccharide level","termid":"FYPO:0001077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal beta-glucan level","synonyms":[{"name":"normal beta-D-glucan level","type":"exact"},{"name":"normal beta-glucan accumulation","type":"related"},{"name":"normal beta-glucan level during mitotic cell cycle","type":"related"},{"name":"normal beta-glucan level during vegetative growth","type":"exact"},{"name":"normal cellular beta-glucan level","type":"exact"}],"termid":"FYPO:0001078"}


id: PBO:0070888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 20","termid":"PBO:0070888"}


id: PBO:0056975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 28","termid":"PBO:0056975"}


id: PBO:0058714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6842","termid":"PBO:0058714"}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18226187","PMID:18206972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0008233","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: MONDO:1012909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brittle, discolored, translucent teeth, disproportionate growth and progressive retinal degeneration resulting in vision loss that occurs in dogs due to a mutation in the MIA3 gene.","definition_xrefs":["PMID:34680893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental-skeletal-retinal anomaly, MIA3-related, dog","secondary_identifiers":["OMIA:002465-9615"],"termid":"MONDO:1012909","xrefs":{"Monarch":{"xref_id":"1012909"}}}


id: PBO:0052082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin interacting protein","termid":"PBO:0052082"}


id: PBO:0116693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 6, oligomeric mucus/gel-forming (gene/pseudogene)","termid":"PBO:0116693"}


id: PBO:0046534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 3 member 1, envelope","termid":"PBO:0046534"}


id: GO:1902296
data:
  {"annotated_genes":["SJAG_02667","SJAG_02908","SJAG_02182","SJAG_00272","SJAG_00814","SJAG_03495","SJAG_00874","SJAG_02818","SJAG_05197","SJAG_01823","SJAG_01010","SJAG_04190","SJAG_00729","SJAG_00863","SJAG_03780","SJAG_04877","SJAG_04879"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112821,112581,70682,113872,110253,115708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[95572,103143,105256,109421,118485,104542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[107664,89915,94303,95604,104543,105257,107302,95573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_01010":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA strand elongation involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication elongation involved in cell cycle DNA replication","type":"exact"},{"name":"DNA strand elongation during DNA replication involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902296","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: GO:1905627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of serotonin biosynthetic process.","definition_xrefs":["PMID:25642596","GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"serotonin biosynthetic process","termid":"GO:0042427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of serotonin biosynthetic process","synonyms":[{"name":"regulation of serotonin anabolism","type":"exact"},{"name":"regulation of serotonin biosynthesis","type":"exact"},{"name":"regulation of serotonin formation","type":"exact"},{"name":"regulation of serotonin synthesis","type":"exact"}],"termid":"GO:1905627"}


id: GO:0071840
data:
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id: PBO:0067267
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id: PBO:0041457
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id: PBO:0003010
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id: PBO:0056633
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id: PBO:0072181
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id: PBO:0050231
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id: MONDO:0033331
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id: PBO:0089539
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id: MONDO:0019233
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id: GO:1903258
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id: MONDO:0013793
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id: GO:0140920
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id: MONDO:0018469
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id: GO:0039668
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id: PBO:0063296
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id: GO:0016776
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id: FYPO:0002698
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id: PBO:0042839
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id: PBO:0052058
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id: PR:P87320
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id: PBO:0051547
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id: MONDO:0020122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An umbrella term for diseases which have chronic muscle inflammation and weakness of unknown etiology. The types of idiopathic inflammatory myopathy are further defined by either clinicopathologic criteria or by the presence of certain autoantibodies.","definition_xrefs":["NCIT:C116796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired skeletal muscle disease","termid":"MONDO:0016105"},{"relation_name":"is_a","term_name":"idiopathic inflammatory myopathy","termid":"MONDO:0600023"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"acquired idiopathic inflammatory myopathy","secondary_identifiers":["Orphanet:98482","GARD:9128","ICD9:359.79","icd11.foundation:464294586"],"synonyms":[{"name":"IIm","type":"exact"},{"name":"IMM","type":"exact"},{"name":"idiopathic inflammatory myopathies","type":"exact"},{"name":"idiopathic inflammatory myopathy, familial","type":"related"},{"name":"idiopathic inflammatory myositis","type":"exact"}],"termid":"MONDO:0020122","xrefs":{"Monarch":{"xref_id":"0020122"}}}


id: PBO:0082477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP (cyclase-associated protein); N-terminus binds adenylate cyclase and facilitates activation by RAS; N-terminus forms novel hexameric star-shaped shuriken structures that directly catalyze cofilin-mediated severing of actin filaments; C-terminus binds and recycles cofilin bound, ADP-actin monomers, facilitating regulation of actin dynamics and cell morphogenesis; N- and C-termini can function as physically separate proteins; mCAP1 is the mouse homolog","termid":"PBO:0082477"}


id: PATO:0000956
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fertility quality inhering in a bearer by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertility","termid":"PATO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile","termid":"PATO:0000956"}


id: MONDO:0014347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019303"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome, type 3","secondary_identifiers":["UMLS:C4014339","MEDGEN:862776","OMIM:615789"],"synonyms":[{"name":"short stature with microcephaly and distinctive facies","type":"exact"}],"termid":"MONDO:0014347","xrefs":{"Monarch":{"xref_id":"0014347"}}}


id: PBO:0112840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD pathway protein","termid":"PBO:0112840"}


id: FYPO:0003339
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring assembly is decreased. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of actomyosin contractile ring assembly","synonyms":[{"name":"decreased rate of actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"decreased rate of actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"decreased rate of contractile ring assembly","type":"exact"},{"name":"decreased rate of cytokinetic contractile ring assembly","type":"exact"},{"name":"decreased rate of mitotic contractile ring assembly","type":"exact"},{"name":"reduced rate of actomyosin contractile ring assembly","type":"exact"}],"termid":"FYPO:0003339"}


id: GO:0018944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tri-n-butyltin, an organometallic compound composed of three butyl chains attached to a tin atom. Tri-n-butyltin is used as an antifouling agent in ship bottom paints and can be toxic to many marine organisms.","definition_xrefs":["UM-BBD_pathwayID:tbt","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organotin metabolic process","termid":"GO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tri-n-butyltin metabolic process","synonyms":[{"name":"tri-n-butyltin metabolism","type":"exact"}],"termid":"GO:0018944"}


id: GO:2001263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of C-C chemokine binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of C-C chemokine binding (obsolete GO:2001263)","termid":"GO:2001263"}


id: GO:0014073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tropane stimulus. Tropane is a nitrogenous bicyclic organic compound mainly known for a group of alkaloids derived from it (called tropane alkaloids), which include, among others, atropine and cocaine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tropane","termid":"GO:0014073"}


id: PBO:0062621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily A member 1","termid":"PBO:0062621"}


id: PBO:0072396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 1","termid":"PBO:0072396"}


id: PBO:0042174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 4","termid":"PBO:0042174"}


id: PATO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A consumption which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000768 decreased consumption (obsolete PATO:0000768)","synonyms":[{"name":"decreased propensity to consume","type":"related"},{"name":"low consumption","type":"exact"}],"termid":"PATO:0000768"}


id: PBO:0042595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 10","termid":"PBO:0042595"}


id: PBO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Chp1","termid":"PBO:0001418"}


id: MONDO:0100029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immune epilepsy where the underlying cause is antibody mediated.","direct_ancestors":[{"relation_name":"is_a","term_name":"immune epilepsy","termid":"MONDO:0100028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"antibody mediated epilepsy","termid":"MONDO:0100029","xrefs":{"Monarch":{"xref_id":"0100029"}}}


id: PBO:0078134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 13-2","termid":"PBO:0078134"}


id: PR:O59666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper-exporting P-type ATPase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-transporting ATPase ccc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.01","secondary_identifiers":["UniProtKB:O59666"],"synonyms":[{"name":"Cu(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-copA","type":"exact"}],"termid":"PR:O59666"}


id: PBO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-G family","termid":"PBO:0000281"}


id: PBO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV stimulated scaffold protein A","termid":"PBO:0080116"}


id: SO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within the transcript that changes the structure of the translational product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_structure_variant","synonyms":[{"name":"translational product structure variant","type":"exact"}],"termid":"SO:0001598"}


id: GO:1903941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of respiratory gaseous exchange.","definition_xrefs":["PMID:22819705","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of respiratory gaseous exchange","synonyms":[{"name":"down regulation of respiratory gaseous exchange","type":"exact"},{"name":"down-regulation of respiratory gaseous exchange","type":"exact"},{"name":"downregulation of respiratory gaseous exchange","type":"exact"},{"name":"inhibition of respiratory gaseous exchange","type":"narrow"}],"termid":"GO:1903941"}


id: PBO:0113066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; associates with and protects nucleosome-free regions of the genome including rDNA, tDNA and telomeric loci, contributing to genome integrity","termid":"PBO:0113066"}


id: SO:1001262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a translational frameshift of -1.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translationally_frameshifted","termid":"SO:0000887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_translationally_frameshifted","synonyms":[{"name":"minus 1 translationally frameshifted","type":"exact"}],"termid":"SO:1001262"}


id: GO:0008202
data:
  {"annotated_genes":["SJAG_02044","SJAG_01307","SJAG_04499","SJAG_02719","SJAG_01474","SJAG_04790","SJAG_02855","SJAG_01326","SJAG_03531","SJAG_04049","SJAG_00413","SJAG_04270","SJAG_03598","SJAG_04124","SJAG_00453","SJAG_03715","SJAG_00158","SJAG_02104","SJAG_00717","SJAG_03509","SJAG_03929","SJAG_04217","SJAG_02982","SJAG_03024","SJAG_02068","SJAG_04059","SJAG_03018","SJAG_04018","SJAG_00770","SJAG_00261","SJAG_03249","SJAG_00624","SJAG_03750","SJAG_03235","SJAG_04810","SJAG_02291","SJAG_00370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62635,102128,117838],"is_not":false,"summary":null,"term":"GO:0008202"},{"annotations":[116841,107843,80299,110394,74690,72100,74332,76592,71265,70213,108156,109557,115534,76534,94971,77564,80659,80672,88814,71905,76619,89999,65935,73512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[115375,103671,80630,104314,76544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008204"},{"annotations":[94222],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[110160],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[75892],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[88904,106164],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"},{"annotations":[72326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016125"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00261":null,"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01326":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02068":null,"SJAG_02104":null,"SJAG_02291":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04124":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04790":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"steroid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Steroid_metabolism","Reactome:R-HSA-8957322"],"synonyms":[{"name":"steroid metabolism","type":"exact"}],"termid":"GO:0008202","terms_by_termid":{"GO:0006696":null,"GO:0008202":null,"GO:0008204":null,"GO:0010895":null,"GO:0016125":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: SO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic 18S rRNA is an RNA component of the small subunit of cytosolic ribosomes in eukaryotes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cytosolic_rRNA_18S_gene","termid":"SO:0002236"},{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA","termid":"SO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_18S_rRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/18S_ribosomal_RNA"],"synonyms":[{"name":"cytosolic 18S rRNA","type":"exact"},{"name":"cytosolic 18S ribosomal RNA","type":"exact"},{"name":"cytosolic rRNA 18S","type":"exact"}],"termid":"SO:0000407"}


id: PBO:0031462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_conjugation","termid":"PBO:0031462"}


id: GO:0051149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["CL:0000187","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"positively_regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle cell differentiation","secondary_identifiers":["Reactome:R-HSA-525793"],"synonyms":[{"name":"activation of muscle cell differentiation","type":"narrow"},{"name":"stimulation of muscle cell differentiation","type":"narrow"},{"name":"up regulation of muscle cell differentiation","type":"exact"},{"name":"up-regulation of muscle cell differentiation","type":"exact"},{"name":"upregulation of muscle cell differentiation","type":"exact"}],"termid":"GO:0051149"}


id: GO:0008290
data:
  {"annotated_genes":["SJAG_02700","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79521,80552],"is_not":false,"summary":null,"term":"GO:0008290"}]},"cv_name":"cellular_component","definition":"A heterodimer consisting of alpha and beta subunits that binds to and caps the barbed ends of actin filaments, thereby regulating the polymerization of actin monomers but not severing actin filaments.","definition_xrefs":["ISBN:0198599560","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01894":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"F-actin capping protein complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008290","terms_by_termid":{"GO:0008290":null}}


id: PBO:0053541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 545","termid":"PBO:0053541"}


id: PBO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_substance","termid":"PBO:0006180"}


id: _global:has_divisor_quality
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"has_ratio_quality","termid":"_global:has_ratio_quality"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_divisor_quality","termid":"_global:has_divisor_quality"}


id: PBO:0065241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 14 like","termid":"PBO:0065241"}


id: PBO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase (predicted)","termid":"PBO:0002083"}


id: GO:0033346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxosuccinamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-4002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"asparagine catabolic process via 2-oxosuccinamate","termid":"GO:0033346"}


id: PBO:0027949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027949"}


id: GO:0009583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus","synonyms":[{"name":"detection of light","type":"exact"},{"name":"perception of light","type":"related"}],"termid":"GO:0009583"}


id: PBO:0028882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K36_methylation","termid":"PBO:0028882"}


id: GO:0052222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052222)","synonyms":[{"name":"negative aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052222"}


id: MONDO:0017683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"homocystinuria without methylmalonic aciduria","termid":"MONDO:0018964"},{"relation_name":"is_a","term_name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0002280","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"methylcobalamin deficiency type cblDv1","secondary_identifiers":["UMLS:C5679956","MEDGEN:1826168","GARD:17385","Orphanet:308380"],"synonyms":[{"name":"functional methionine synthase deficiency type cblDv1","type":"exact"}],"termid":"MONDO:0017683","xrefs":{"Monarch":{"xref_id":"0017683"}}}


id: PBO:0047354
data:
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id: PBO:0036506
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id: MONDO:0850094
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id: PBO:0048481
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id: PBO:0113223
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id: MONDO:0007275
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id: GO:0006364
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id: PBO:0004273
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id: FYPO:0005402
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id: PBO:0040267
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id: GO:0007020
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id: PBO:0073809
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id: PBO:0039913
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id: MONDO:0100576
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"An instance of generalized epilepsy that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"genetic generalized epilepsy","termid":"MONDO:0100575"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"hereditary generalized epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100576","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0100576"}}}


id: PBO:0055890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 9","termid":"PBO:0055890"}


id: PBO:0029975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_dephosphorylation_during_mitotic_G2/M_transition","termid":"PBO:0029975"}


id: MONDO:0021513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the tonsil.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"tonsil neoplasm","termid":"MONDO:0021250"},{"relation_name":"is_a","term_name":"benign neoplasm of pharynx","termid":"MONDO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"benign neoplasm of tonsil","secondary_identifiers":["SCTID:92263001","UMLS:C0153936","icd11.foundation:2132438112","MEDGEN:57804","ICD9:210.5","ICD10CM:D10.4","NCIT:C3594"],"synonyms":[{"name":"benign neoplasm of the tonsil","type":"exact"},{"name":"benign tonsil neoplasm","type":"exact"},{"name":"benign tonsil tumor","type":"exact"},{"name":"benign tonsil tumour","type":"exact"},{"name":"benign tonsillar neoplasm","type":"exact"},{"name":"benign tonsillar tumor","type":"exact"},{"name":"benign tonsillar tumour","type":"exact"},{"name":"benign tumor of the tonsil","type":"exact"},{"name":"benign tumor of tonsil","type":"exact"},{"name":"benign tumour of the tonsil","type":"exact"},{"name":"benign tumour of tonsil","type":"exact"},{"name":"tonsil benign neoplasm","type":"exact"},{"name":"tonsillar neoplasm, benign","type":"exact"}],"termid":"MONDO:0021513","xrefs":{"Monarch":{"xref_id":"0021513"}}}


id: GO:0048768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Localized growth of a plant root hair tip by extension of the cell wall.","definition_xrefs":["PMID:12468740","GOC:ki","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip growth","termid":"GO:0009932"},{"relation_name":"part_of","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell tip growth","synonyms":[{"name":"root hair tip growth","type":"exact"}],"termid":"GO:0048768"}


id: GO:0045309
data:
  {"annotated_genes":["SJAG_03118","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78427,72879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated amino acid residue within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein binding","termid":"GO:0051219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"protein phosphorylated amino acid binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoprotein amino acid binding","type":"related"}],"termid":"GO:0045309","terms_by_termid":{"GO:1990269":null}}


id: MONDO:0011895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic cardiomyopathy","termid":"MONDO:0005110"},{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"},{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"idiopathic hypereosinophilic syndrome","secondary_identifiers":["Orphanet:3260","UMLS:C0206141","GARD:16625","MEDGEN:61525","SCTID:423294001","icd11.foundation:703101846","OMIM:607685"],"synonyms":[{"name":"HES","type":"related"},{"name":"hypereosinophilic syndrome, idiopathic","type":"related"},{"name":"hypereosinophilic syndrome, idiopathic, resistant to imatinib, isolated cases, somatic mutation","type":"exact"}],"termid":"MONDO:0011895","xrefs":{"Monarch":{"xref_id":"0011895"}}}


id: PBO:0085781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the mitochondrial outer surface; links the Arp2/3 complex with the mitochondria during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins; translationally represses oxidative stress-linked genes; regulates CoQ biosynthesis","termid":"PBO:0085781"}


id: GO:0140820
data:
  {"annotated_genes":["SJAG_01960","SJAG_00328","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[75092,104629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the cytosol into the Golgi apparatus of a cell.","definition_xrefs":["PMID:28373556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_01960":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cytosol to Golgi apparatus transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140820","terms_by_termid":{"GO:0036085":null,"GO:1904257":null}}


id: PBO:0003939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic lysine-tRNA ligase Krs1 (predicted)","termid":"PBO:0003939"}


id: MONDO:0970998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auroneurodental syndrome","secondary_identifiers":["OMIM:620830","UMLS:C5889721","MEDGEN:1861965"],"termid":"MONDO:0970998","xrefs":{"Monarch":{"xref_id":"0970998"}}}


id: GO:0050892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which nutrients are taken up from the contents of the intestine.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal absorption","secondary_identifiers":["Reactome:R-HSA-8963676"],"termid":"GO:0050892"}


id: PR:O59678
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis regulatory protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR17602:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis regulatory protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.16","secondary_identifiers":["UniProtKB:O59678"],"synonyms":[{"name":"Spom972h-RRS1","type":"exact"}],"termid":"PR:O59678"}


id: MONDO:0958175
data:
  {"annotated_genes":["SJAG_00539","SJAG_00322"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86079,86080],"is_not":false,"summary":null,"term":"MONDO:0958175"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial microsomia","termid":"MONDO:0015397"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00322":null,"SJAG_00539":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniofacial microsomia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:501171","OMIM:164210","UMLS:C3495417"],"termid":"MONDO:0958175","terms_by_termid":{"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0958175"}}}


id: GO:0030150
data:
  {"annotated_genes":["SJAG_03502","SJAG_01684","SJAG_02077","SJAG_04014","SJAG_02917","SJAG_05259","SJAG_01120","SJAG_03358","SJAG_03560","SJAG_00373","SJAG_01879","SJAG_01615","SJAG_00564","SJAG_03515","SJAG_04432","SJAG_03415","SJAG_01597","SJAG_01442","SJAG_04218","SJAG_04996","SJAG_04336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88671,89880,91235,94854,97215,99568,99752,99866,100640,103011,103598,105510,106496,107823,107880,107902,110187,112107,115531,117078,117546],"is_not":false,"summary":null,"term":"GO:0030150"}]},"cv_name":"biological_process","definition":"The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00564":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0006605","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein import into mitochondrial matrix","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial matrix protein import","type":"exact"},{"name":"mitochondrial translocation","type":"broad"},{"name":"protein transport into mitochondrial matrix","type":"exact"}],"termid":"GO:0030150","terms_by_termid":{"GO:0030150":null}}


id: PBO:0044411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 2, pseudogene","termid":"PBO:0044411"}


id: PBO:0064902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit beta","termid":"PBO:0064902"}


id: PBO:0027971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sulfite_reductase_activity","termid":"PBO:0027971"}


id: FYPO:0009109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is decreased relative to normal after short incubation in hydroxyurea.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"},{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0002060","FYPO:0002058","FYPO:0001985","FYPO:0002683","FYPO:0002057"],"is_obsolete":false,"name":"decreased vegetative cell population growth after short incubation in hydroxyurea","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"decreased vegetative cell population growth after acute hydroxyurea treatment","type":"exact"}],"termid":"FYPO:0009109"}


id: PBO:0087907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor (bHLH) involved in interorganelle communication; contributes to communication between mitochondria, peroxisomes, and nucleus; target of Hog1p; activated in stochastic pulses of nuclear localization","termid":"PBO:0087907"}


id: MONDO:0002378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma characterized by the presence of a cyst which is lined by mature tissue resembling the epidermis and the epidermal appendages. It occurs in the ovary, testis, and extragonadal sites including central nervous system and skin.","definition_xrefs":["NCIT:C9011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic teratoma","termid":"MONDO:0002379"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermoid cyst","secondary_identifiers":["icd11.foundation:1622534741","DOID:2658","ICDO:9084/0","MEDGEN:41504","MESH:D003884","SCTID:441459009","UMLS:C0011649"],"synonyms":[{"name":"benign cystic teratoma","type":"exact"},{"name":"cystic dermoid choristoma","type":"exact"},{"name":"dermoid","type":"exact"},{"name":"dermoid choristoma","type":"exact"},{"name":"dermoid cyst","type":"exact"},{"name":"dermoid cyst, benign","type":"exact"},{"name":"dermoid tumor","type":"exact"},{"name":"dermoid tumour","type":"exact"},{"name":"mature cystic teratoma","type":"exact"},{"name":"subcutaneous cystic teratoma","type":"exact"},{"name":"teratoma, benign","type":"related"},{"name":"teratoma, benign (morphologic abnormality)","type":"related"}],"termid":"MONDO:0002378","xrefs":{"Monarch":{"xref_id":"0002378"}}}


id: PBO:0087992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase; required for the ct6A tRNA base modification, where an adenosine at position 37 is modified to form a cyclized active ester with an oxazolone ring; localized to the mitochondrial outer membrane; TCD1 has a paralog, TCD2, that arose from the whole genome duplication","termid":"PBO:0087992"}


id: MONDO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hypersensitivity reaction type II disease that involves the genitourinary system.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete autoimmune disorder of urogenital tract (obsolete MONDO:0000601)","secondary_identifiers":["DOID:0060049"],"synonyms":[{"name":"autoimmune disease of genitourinary system","type":"exact"},{"name":"genitourinary system autoimmune disease","type":"exact"},{"name":"genitourinary system hypersensitivity reaction type II disease","type":"exact"}],"termid":"MONDO:0000601","xrefs":{"Monarch":{"xref_id":"0000601"}}}


id: PBO:0074178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 1","termid":"PBO:0074178"}


id: PBO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12 pseudogene 1","termid":"PBO:0042488"}


id: MONDO:0018051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jessner lymphocytic infiltration of the skin (JLIS) is a chronic benign cutaneous disease characterized by asymptomatic non-scaly erythematous papules or plaques on the face and neck.","definition_xrefs":["Orphanet:33314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Jessner lymphocytic infiltration of the skin","secondary_identifiers":["GARD:6940","MEDGEN:663150","NORD:1384","icd11.foundation:1624135677","UMLS:C0580181"],"synonyms":[{"name":"Jessner disease","type":"related"},{"name":"Jessner-Kanof lymphocytic infiltration of the skin","type":"exact"},{"name":"Jessner-Kanof syndrome","type":"related"},{"name":"Lymphocytic Infiltrate of Jessner","type":"exact"},{"name":"benign chronic T-cell infiltrative disorder","type":"related"},{"name":"benign lymphocytic infiltration","type":"related"},{"name":"lymphocytic infiltrate of Jessner","type":"related"}],"termid":"MONDO:0018051","xrefs":{"Monarch":{"xref_id":"0018051"}}}


id: PR:O74782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC25B2.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"universal stress protein A family protein C25B2.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25B2.10","synonyms":[{"name":"Spom972h-SPBC25B2.10","type":"exact"}],"termid":"PR:O74782"}


id: FYPO:0004917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:11402029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased positive regulation of protein kinase activity","synonyms":[{"name":"decreased activation of protein kinase activity","type":"narrow"},{"name":"decreased positive regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased positive regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced positive regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0004917"}


id: MONDO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete angiosarcoma (obsolete MONDO:0005330)","termid":"MONDO:0005330","xrefs":{"Monarch":{"xref_id":"0005330"}}}


id: GO:0031372
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric ubiquitin conjugating enzyme complex that catalyzes assembly of K63-linked polyubiquitin chains. In Saccharomyces cerevisiae, the complex comprises Ubc13p and Mms2p; in human it comprises UBE2N and UBE2V1/UBE2V2; and in plants UBC35/UBC36 and UEV1A/UEV1B/UEV1C/UEV1D-4.","definition_xrefs":["PMID:16129784","GOC:sjm","PMID:15772086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"UBC13-MMS2 complex","synonyms":[{"name":"BEN-UEV1A complex","type":"exact"},{"name":"UBE2N/UBE2NL complex","type":"narrow"},{"name":"UBE2V1/UBE2V2 complex","type":"narrow"},{"name":"Uev1A-ben complex","type":"narrow"},{"name":"ubc-13-uev-1 complex","type":"narrow"}],"termid":"GO:0031372"}


id: GO:0008889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate.","definition_xrefs":["EC:3.1.4.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-1483116","Reactome:R-HSA-1483107","RHEA:12969","MetaCyc:GLYCPDIESTER-RXN"],"synonyms":[{"name":"IgD-binding protein D","type":"related"},{"name":"gene hpd protein","type":"related"},{"name":"glycerophosphodiester glycerophosphohydrolase activity","type":"related"},{"name":"glycerophosphoryl diester phosphodiesterase activity","type":"related"}],"termid":"GO:0008889"}


id: PR:P17871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tbp1 gene.","definition_xrefs":["UniProtKB:P17871","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.08","synonyms":[{"name":"Spom972h-tbp1","type":"exact"},{"name":"TATA sequence-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-binding factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-box factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID TBP subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P17871"}


id: GO:0009999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an auditory hair cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of inner ear auditory receptor cell fate specification","termid":"GO:0042669"},{"relation_name":"is_a","term_name":"negative regulation of inner ear auditory receptor cell differentiation","termid":"GO:0045608"},{"relation_name":"negatively_regulates","term_name":"auditory receptor cell fate specification","termid":"GO:0042667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of auditory receptor cell fate specification","synonyms":[{"name":"down regulation of auditory receptor cell fate specification","type":"exact"},{"name":"down-regulation of auditory receptor cell fate specification","type":"exact"},{"name":"downregulation of auditory receptor cell fate specification","type":"exact"},{"name":"inhibition of auditory receptor cell fate specification","type":"narrow"},{"name":"negative regulation of auditory hair cell fate specification","type":"exact"},{"name":"suppression of auditory receptor cell fate","type":"exact"},{"name":"suppression of hair cell fate","type":"exact"}],"termid":"GO:0009999"}


id: GO:0033360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediates diaminopimelate and L-2-acetamido-6-oxoheptanedioate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in four enzymatic steps.","definition_xrefs":["GOC:mah","MetaCyc:PWY-2941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006520","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","synonyms":[{"name":"lysine anabolism via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine biosynthetic process via diaminopimelic acid and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine formation via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","type":"exact"},{"name":"lysine synthesis via diaminopimelate and L-2-acetamido-6-oxoheptanedioate","type":"exact"}],"termid":"GO:0033360"}


id: PBO:0043164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIDEC pseudogene 1","termid":"PBO:0043164"}


id: PBO:0005090
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undergoes depletion in translin deficient cells via a translin-dependent proteasome independent pathway","termid":"PBO:0005090"}


id: MONDO:0002675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor that arises from small cutaneous nerves, is locally aggressive, and has a potential for metastasis. Characteristic histopathologic features include proliferating atypical spindle cells with slender wavy and pointed nuclei, hypocellular areas, and areas featuring organized whorls of fibroblastic proliferation. The most common primary sites are the extremities, retroperitoneum, and trunk. These tumors tend to present in childhood, often in association with neurofibromatosis 1. (From DeVita et al., Cancer: Principles & Practice of Oncology, 5th ed, p1662; Mayo Clin Proc 1990 Feb;65(2):164-72)","definition_xrefs":["MESH:D018319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibrosarcoma","secondary_identifiers":["GARD:8211","SCTID:404037002","UMLS:C0206729","MEDGEN:104927","DOID:3512"],"synonyms":[{"name":"neurosarcoma","type":"exact"},{"name":"neurosarcoma [obs]","type":"exact"}],"termid":"MONDO:0002675","xrefs":{"Monarch":{"xref_id":"0002675"}}}


id: PBO:0062853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otogelin","termid":"PBO:0062853"}


id: MONDO:0014469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the CLIC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 103","secondary_identifiers":["DOID:0110464","OMIM:616042","GARD:22653","MEDGEN:863487","UMLS:C4015050"],"synonyms":[{"name":"CLIC5 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB103","type":"narrow"},{"name":"autosomal recessive deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CLIC5","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 103","type":"narrow"},{"name":"deafness, autosomal recessive 103","type":"narrow"},{"name":"deafness, autosomal recessive type 103","type":"narrow"}],"termid":"MONDO:0014469","xrefs":{"Monarch":{"xref_id":"0014469"}}}


id: PBO:0004904
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dominent ataxia SCA28","termid":"PBO:0004904"}


id: GO:0022878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + sucrose(out) = protein histidine + sucrose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sucrose phosphotransferase system transporter activity","secondary_identifiers":["RHEA:49236","MetaCyc:SUCROSEPHOSPHO-RXN"],"synonyms":[{"name":"sucrose PTS transporter activity","type":"exact"}],"termid":"GO:0022878"}


id: _global:has_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"_global:has_component_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","secondary_identifiers":["RO:0002017"],"termid":"_global:has_component_activity"}


id: PBO:0083388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps HAC1/YFL031W; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083388"}


id: PBO:0046559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 1","termid":"PBO:0046559"}


id: MONDO:0015650
data:
  {"annotated_genes":["SJAG_00760","SJAG_01831","SJAG_02869","SJAG_00063","SJAG_00824","SJAG_02084","SJAG_01507","SJAG_04038","SJAG_00321","SJAG_04157","SJAG_03631","SJAG_03278","SJAG_02060","SJAG_01851","SJAG_00071","SJAG_03311","SJAG_03042","SJAG_01016","SJAG_02384","SJAG_03634","SJAG_00261","SJAG_02236","SJAG_03579","SJAG_02178","SJAG_02680","SJAG_01797","SJAG_01790","SJAG_02453","SJAG_02316","SJAG_05327","SJAG_00301","SJAG_01653","SJAG_00330","SJAG_02233","SJAG_04853","SJAG_02266","SJAG_01697","SJAG_03657","SJAG_01089","SJAG_04351","SJAG_04936","SJAG_03066","SJAG_00567","SJAG_04513","SJAG_02180","SJAG_01059","SJAG_00714","SJAG_02848","SJAG_02913","SJAG_02576","SJAG_00342","SJAG_02765","SJAG_04881","SJAG_01471","SJAG_00964","SJAG_01753","SJAG_00516","SJAG_01184","SJAG_04545","SJAG_03797","SJAG_03256","SJAG_04909"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030881"},{"annotations":[87198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031021"},{"annotations":[87200,87201,87202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031028"},{"annotations":[86090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031055"},{"annotations":[85936,85935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859325"},{"annotations":[86570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957780"},{"annotations":[87504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958330"},{"annotations":[87514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0968946"},{"annotations":[85570,85571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020630"},{"annotations":[86890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020632"},{"annotations":[86304,86305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014150"},{"annotations":[86887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0023659"},{"annotations":[87379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013389"},{"annotations":[86189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014199"},{"annotations":[86742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014392"},{"annotations":[85610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014593"},{"annotations":[85557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012245"},{"annotations":[85621,85620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"},{"annotations":[86903,86904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957248"},{"annotations":[85584,85586,85585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014625"},{"annotations":[86366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014719"},{"annotations":[87233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010472"},{"annotations":[86442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014868"},{"annotations":[86545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012812"},{"annotations":[86484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014895"},{"annotations":[87505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014933"},{"annotations":[87363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015000"},{"annotations":[85470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014647"},{"annotations":[87215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015025"},{"annotations":[87234,87235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033362"},{"annotations":[85786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033364"},{"annotations":[85607,85608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033365"},{"annotations":[86717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0029138"},{"annotations":[86467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0034106"},{"annotations":[87480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032752"},{"annotations":[87508,87507,87509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032768"},{"annotations":[87332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032808"},{"annotations":[87355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032822"},{"annotations":[87210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032858"},{"annotations":[87155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032880"},{"annotations":[87038,87039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032895"},{"annotatio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id: PBO:0070786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 16","termid":"PBO:0070786"}


id: PBO:0074077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 1","termid":"PBO:0074077"}


id: GO:0032887
data:
  {"annotated_genes":["SJAG_04597","SJAG_04464","SJAG_00082","SJAG_00244","SJAG_03048","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902845"},{"annotations":[90342,94750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[111744],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[111327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032888"},{"annotations":[115352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule-based process","termid":"GO:0032886"},{"relation_name":"regulates","term_name":"spindle elongation","termid":"GO:0051231"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032887","terms_by_termid":{"GO:0032888":null,"GO:0110161":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null}}


id: MONDO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin or Hodgkin lymphoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"prostate cancer","termid":"MONDO:0008315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"prostate lymphoma","secondary_identifiers":["DOID:10290","MEDGEN:235500","UMLS:C1335512"],"synonyms":[{"name":"lymphoma of prostate","type":"exact"},{"name":"lymphoma of prostate gland","type":"exact"},{"name":"lymphoma of the prostate","type":"exact"},{"name":"primary prostate lymphoma","type":"exact"},{"name":"prostate gland lymphoma","type":"exact"},{"name":"prostate lymphoma","type":"exact"}],"termid":"MONDO:0000996","xrefs":{"Monarch":{"xref_id":"0000996"}}}


id: PBO:0083384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps dubious open reading frame Q0143","termid":"PBO:0083384"}


id: GO:0110034
data:
  {"annotated_genes":["SJAG_01245","SJAG_02311","SJAG_02426","SJAG_00266","SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92427,93092,100762,108282,116680],"is_not":false,"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway.","definition_xrefs":["PMID:24297439","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106072"},{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0110033"},{"relation_name":"is_a","term_name":"negative regulation of glucose mediated signaling pathway","termid":"GO:1902660"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0010619"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of adenylate cyclase-activating glucose-activated G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0110034","terms_by_termid":{"GO:0110034":null}}


id: GO:0032763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell cytokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"mast cell cytokine production","termid":"GO:0032762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mast cell cytokine production","termid":"GO:0032763"}


