# terms

id: PBO:0082459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX box containing protein of unknown function; proposed to be involved in the RAS/cAMP signaling pathway","termid":"PBO:0082459"}


id: MONDO:1012252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic paresis, non-human animal","termid":"MONDO:1011859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paresis, pig","secondary_identifiers":["OMIA:000928-9823"],"termid":"MONDO:1012252","xrefs":{"Monarch":{"xref_id":"1012252"}}}


id: PBO:0054657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2063","termid":"PBO:0054657"}


id: PBO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.2","termid":"PBO:0005037"}


id: MONDO:0859007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mosaic Legius syndrome","secondary_identifiers":["MEDGEN:1843406","Orphanet:634511","UMLS:C5816780"],"termid":"MONDO:0859007","xrefs":{"Monarch":{"xref_id":"0859007"}}}


id: PBO:0029080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029080"}


id: FYECO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which a MAP kinase inhibitor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MAP kinase inhibitor","synonyms":[{"name":"SP600125","type":"narrow"},{"name":"respiratory chain inhibitor","type":"related"}],"termid":"FYECO:0000452"}


id: PBO:0082030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein, major isoform; controls proteome at post-transcriptional level, binds proteins and DNA, involved in regulation of exocytosis, vesicle transport, Ras/MAPK and rapamycin-sensitive signaling, aggresome formation, spindle position checkpoint; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; antiapoptotic gene similar to human 14-3-3; BMH1 has a paralog, BMH2, that arose from whole genome duplication","termid":"PBO:0082030"}


id: PBO:0066644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 2","termid":"PBO:0066644"}


id: GO:0009455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to redox potential.","definition_xrefs":["GOC:jl","PMID:11029423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemotaxis","termid":"GO:0006935"},{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"},{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"redox taxis","synonyms":[{"name":"redoxtaxis","type":"exact"},{"name":"taxis in response to redox potential","type":"exact"},{"name":"taxis in response to redox stimulus","type":"exact"}],"termid":"GO:0009455"}


id: PR:Q09116
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.06","synonyms":[{"name":"Spom972h-spn2","type":"exact"}],"termid":"PR:Q09116"}


id: GO:0048534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of any organ involved in hematopoiesis (also known as hemopoiesis) or lymphoid cell activation over time, from its formation to the mature structure. Such development includes differentiation of resident cell types (stromal cells) and of migratory cell types dependent on the unique microenvironment afforded by the organ for their proper differentiation.","definition_xrefs":["GOC:add","GOC:rl","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic or lymphoid organ development","synonyms":[{"name":"haematopoietic or lymphoid organ development","type":"exact"},{"name":"haemopoietic or lymphoid organ development","type":"exact"},{"name":"hemopoietic or lymphoid organ development","type":"exact"}],"termid":"GO:0048534"}


id: GO:0140882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of zinc ions from a cell, into the extracellular region.","definition_xrefs":["PMID:17355957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transport","termid":"GO:0071577"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"zinc export across plasma membrane","synonyms":[{"name":"zinc ion export from cell","type":"exact"}],"termid":"GO:0140882"}


id: GO:0005809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Golgi-vacuole transport vesicle (obsolete GO:0005809)","synonyms":[{"name":"Golgi-vacuole transport vesicle","type":"exact"}],"termid":"GO:0005809"}


id: MONDO:0014962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the MBOAT7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 57","secondary_identifiers":["MEDGEN:934640","UMLS:C4310673","OMIM:617188","DOID:0081219","GARD:22575"],"synonyms":[{"name":"MBOAT7 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT57","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in MBOAT7","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 57","type":"exact"},{"name":"intellectual disability, autosomal recessive 57","type":"exact"},{"name":"intellectual disability, autosomal recessive type 57","type":"exact"},{"name":"mental retardation, autosomal recessive 57","type":"exact"},{"name":"mental retardation, autosomal recessive type 57","type":"exact"}],"termid":"MONDO:0014962","xrefs":{"Monarch":{"xref_id":"0014962"}}}


id: PBO:0034790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Hfi1/Ada1","termid":"PBO:0034790"}


id: PBO:0063701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGLS divergent transcript","termid":"PBO:0063701"}


id: MONDO:0005030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fetus that does not grow beyond the 10th percentile of conventionally accepted weight for gestational age.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal growth restriction","secondary_identifiers":["ICD9:764.97","MESH:D005317","EFO:0000495","ICD9:764.96","SCTID:22033007","ICD9:764.99","ICD9:764.92","ICD9:764.93","UMLS:C0015934","ICD9:764.98","NCIT:C114875","ICD9:764.9","ICD9:764.91","ICD9:764.90","ICD9:764.94","ICD9:764.95","MEDGEN:4693"],"synonyms":[{"name":"IUGR","type":"exact"},{"name":"fetal Growth retardation","type":"exact"},{"name":"fetal SGA","type":"exact"},{"name":"fetal growth retardation","type":"exact"},{"name":"fetal small for gestational Age","type":"exact"},{"name":"fetus small for gestational Age","type":"exact"},{"name":"foetal Growth retardation","type":"exact"},{"name":"foetal SGA","type":"exact"},{"name":"foetal growth retardation","type":"exact"},{"name":"foetal small for gestational Age","type":"exact"},{"name":"foetus small for gestational Age","type":"exact"},{"name":"intrauterine Growth restriction","type":"exact"},{"name":"intrauterine Growth retardation","type":"exact"}],"termid":"MONDO:0005030","xrefs":{"Monarch":{"xref_id":"0005030"}}}


id: MONDO:0013088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"follicular lymphoma","termid":"MONDO:0018906"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular lymphoma, susceptibility to, 1","secondary_identifiers":["MEDGEN:442784","UMLS:C2751665","OMIM:613024"],"synonyms":[{"name":"FL1","type":"exact"},{"name":"follicular lymphoma, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0013088","xrefs":{"Monarch":{"xref_id":"0013088"}}}


id: GO:0070372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:add","ISBN:0121245462","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of MAPK cascade","termid":"GO:0043408"},{"relation_name":"regulates","term_name":"ERK1 and ERK2 cascade","termid":"GO:0070371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ERK1 and ERK2 cascade","synonyms":[{"name":"regulation of ERK cascade","type":"broad"},{"name":"regulation of ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"regulation of ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"regulation of ERK1 cascade","type":"narrow"},{"name":"regulation of ERK1/2 cascade","type":"exact"},{"name":"regulation of ERK2 cascade","type":"narrow"},{"name":"regulation of MAPK1 cascade","type":"narrow"},{"name":"regulation of MAPK3 cascade","type":"narrow"}],"termid":"GO:0070372"}


id: GO:0046301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide biosynthetic process (obsolete GO:0046301)","synonyms":[{"name":"2-chloro-N-isopropylacetanilide anabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthesis","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide biosynthetic process","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide formation","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide synthesis","type":"exact"}],"termid":"GO:0046301"}


id: PBO:0090286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein, lipocalin superfamily Svf1","termid":"PBO:0090286"}


id: PBO:0067559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 712, pseudogene","termid":"PBO:0067559"}


id: MONDO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distinctive type of liver cell carcinoma that arises in non-cirrhotic livers and is seen predominantly in young patients. The tumor cells are polygonal and deeply eosinophilic, and are embedded in a fibrous stroma. The prognosis is similar to classical hepatocellular carcinoma that arises in non-cirrhotic livers, and better than hepatocellular carcinoma that arises in cirrhotic livers.","definition_xrefs":["NCIT:C4131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"fibrolamellar hepatocellular carcinoma","secondary_identifiers":["EFO:1000256","MEDGEN:83122","GARD:21704","ICDO:8171/3","DOID:5015","MESH:C537258","ONCOTREE:FLC","SCTID:253018005","UMLS:C0334287","Orphanet:401920"],"synonyms":[{"name":"FHCC","type":"exact"},{"name":"FL-HCC","type":"related"},{"name":"FLC","type":"exact"},{"name":"eosinophilic glassy cell hepatoma","type":"related"},{"name":"eosinophilic hepatocellular carcinoma with lamellar fibrosis","type":"related"},{"name":"fibrolamellar cancer","type":"exact"},{"name":"fibrolamellar carcinoma","type":"exact"},{"name":"fibrolamellar carcinoma of liver cells","type":"exact"},{"name":"fibrolamellar carcinoma of the liver cells","type":"exact"},{"name":"fibrolamellar hepatocarcinoma","type":"exact"},{"name":"fibrolamellar hepatocellular carcinoma","type":"exact"},{"name":"fibrolamellar oncocytic hepatoma","type":"related"},{"name":"fibrolamellar variant of hepatocellular carcinoma","type":"related"},{"name":"hepatocellular carcinoma (fibrolamellar variant)","type":"related"},{"name":"hepatocellular carcinoma with increased stromal fibrosis","type":"related"},{"name":"hepatocellular carcinoma, fibrolamellar","type":"exact"},{"name":"hepatocellular fibrolamellar carcinoma","type":"exact"},{"name":"liver cell fibrolamellar carcinoma","type":"exact"},{"name":"oncocytic hepatocellular tumor","type":"exact"},{"name":"oncocytic hepatocellular tumour","type":"exact"},{"name":"polygonal cell hepatocellular carcinoma with fibrous stroma","type":"related"},{"name":"polygonal cell type hepatocellular carcinoma with fibrous Stroma","type":"exact"}],"termid":"MONDO:0006210","xrefs":{"Monarch":{"xref_id":"0006210"}}}


id: PBO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 47","termid":"PBO:0044764"}


id: MONDO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed, lobulated tumor, completely or partially covered by a fibrous capsule. It usually arises in the fingers. It is characterized by the presence of mononuclear cells, multinucleated osteoclast-like giant cells, hemosiderin-laden macrophages, foam cells, and an inflammatory infiltrate. The tumor is slow-growing, usually developing over several years. Clinical presentation includes painless edema of the affected site.","definition_xrefs":["NCIT:C6532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tenosynovial giant cell tumor","termid":"MONDO:0002522"},{"relation_name":"is_a","term_name":"benign synovial neoplasm","termid":"MONDO:0024715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenosynovial giant cell tumor, localized type","secondary_identifiers":["SCTID:95413004","UMLS:C0588125","ICD9:727.02","DOID:2701","MEDGEN:154413"],"synonyms":[{"name":"benign synovioma","type":"related"},{"name":"benign tumor of synovium","type":"related"},{"name":"benign tumour of synovium","type":"related"},{"name":"localised giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"localised giant cell neoplasm of tendon sheath","type":"exact"},{"name":"localised giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"localised giant cell tumour of Tenosynovium","type":"exact"},{"name":"localised giant cell tumour of tendon sheath","type":"exact"},{"name":"localised giant cell tumour of the Tenosynovium","type":"exact"},{"name":"localised tenosynovial giant cell neoplasm","type":"exact"},{"name":"localised tenosynovial giant cell tumour","type":"exact"},{"name":"localized giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"localized giant cell neoplasm of tendon sheath","type":"exact"},{"name":"localized giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"localized giant cell tumor of Tenosynovium","type":"exact"},{"name":"localized giant cell tumor of tendon sheath","type":"exact"},{"name":"localized giant cell tumor of the Tenosynovium","type":"exact"},{"name":"localized tenosynovial giant cell neoplasm","type":"exact"},{"name":"localized tenosynovial giant cell tumor","type":"exact"},{"name":"nodular tenosynovitis","type":"exact"},{"name":"synovioma, benign (morphologic abnormality)","type":"exact"},{"name":"tenosynovial giant cell tumor, localized type","type":"exact"}],"termid":"MONDO:0002399","xrefs":{"Monarch":{"xref_id":"0002399"}}}


id: GO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a histone by cis-trans isomerization of a proline residue.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete histone peptidyl-prolyl isomerization (obsolete GO:0000412)","synonyms":[{"name":"histone proline isomerization","type":"exact"}],"termid":"GO:0000412"}


id: PBO:0117190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK3 antisense RNA 1","termid":"PBO:0117190"}


id: MONDO:0859193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neuroocular syndrome","secondary_identifiers":["MEDGEN:1790414","OMIMPS:619539","UMLS:C5551362"],"termid":"MONDO:0859193","xrefs":{"Monarch":{"xref_id":"0859193"}}}


id: PBO:0081320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 106","termid":"PBO:0081320"}


id: PBO:0070954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 9","termid":"PBO:0070954"}


id: MONDO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hematologic malignancy that is resistant to treatment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"refractory hematologic cancer","secondary_identifiers":["UMLS:C1335724","MEDGEN:233400","NCIT:C27357","DOID:712"],"synonyms":[{"name":"refractory hematologic cancer","type":"exact"},{"name":"refractory hematologic malignancy","type":"exact"}],"termid":"MONDO:0004111","xrefs":{"Monarch":{"xref_id":"0004111"}}}


id: GO:0042610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD8, a receptor found on the surface of thymocytes and cytotoxic and suppressor T-lymphocytes.","definition_xrefs":["GOC:jl","MSH:D016827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CD8 receptor binding","termid":"GO:0042610"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: GO:0035965
data:
  {"annotated_genes":["SJAG_04323"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71416],"is_not":false,"summary":null,"term":"GO:0035965"}]},"cv_name":"biological_process","definition":"Remodeling the acyl chains of premature (de novo synthesized) cardiolipin (1,3-bis(3-phosphatidyl)glycerol), through sequential deacylation and re-acylation reactions, to generate mature cardiolipin containing high-levels of unsaturated fatty acids.","definition_xrefs":["GOC:bf","PMID:19244244","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04323":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"cardiolipin acyl-chain remodeling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1482798"],"synonyms":[{"name":"cardiolipin acyl-chain remodelling","type":"exact"},{"name":"cardiolipin maturation","type":"broad"},{"name":"diphosphatidylglycerol remodeling","type":"related"}],"termid":"GO:0035965","terms_by_termid":{"GO:0035965":null}}


id: PATO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer possessing an uninterrupted or unbroken connection or spatial distribution relative to the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"continuous with","termid":"PATO:0005011"}


id: PBO:0068321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19B pseudogene Y-linked","termid":"PBO:0068321"}


id: PBO:0042183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 3","termid":"PBO:0042183"}


id: GO:0035937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of estrogen into the circulatory system. Estrogen is a steroid hormone that stimulates or controls the development and maintenance of female sex characteristics in mammals.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"estrogen secretion","synonyms":[{"name":"oestrogen secretion","type":"related"}],"termid":"GO:0035937"}


id: PBO:0051443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-29 (pseudogene)","termid":"PBO:0051443"}


id: GO:0042376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phylloquinone, vitamin K1, a quinone-derived compound synthesized by green plants.","definition_xrefs":["GOC:jl","PMID:27337968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phylloquinone metabolic process","termid":"GO:0042374"},{"relation_name":"is_a","term_name":"vitamin K catabolic process","termid":"GO:0042377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phylloquinone catabolic process","synonyms":[{"name":"phylloquinone breakdown","type":"exact"},{"name":"phylloquinone catabolism","type":"exact"},{"name":"phylloquinone degradation","type":"exact"},{"name":"phytomenadione catabolic process","type":"exact"},{"name":"phytomenadione catabolism","type":"exact"},{"name":"phytonadione catabolic process","type":"exact"},{"name":"phytonadione catabolism","type":"exact"},{"name":"phytylmenaquinone catabolic process","type":"exact"},{"name":"phytylmenaquinone catabolism","type":"exact"},{"name":"vitamin K1 catabolic process","type":"exact"},{"name":"vitamin K1 catabolism","type":"exact"}],"termid":"GO:0042376"}


id: PBO:0028562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_meiotic_sister_chromatid_segregation","termid":"PBO:0028562"}


id: GO:0060122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of inner ear receptor cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"part_of","term_name":"inner ear receptor cell development","termid":"GO:0060119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell stereocilium organization","synonyms":[{"name":"inner ear hair cell receptor stereocilium organization","type":"exact"},{"name":"inner ear receptor stereocilium organisation","type":"exact"},{"name":"inner ear receptor stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060122"}


id: GO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 S-adenosyl-L-methionine(1+) = 3 S-methyl-5'-thioadenosine + 3 H+ + nicotianamine.","definition_xrefs":["EC:2.5.1.43","RHEA:16481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nicotianamine synthase activity","secondary_identifiers":["KEGG_REACTION:R00075","MetaCyc:2.5.1.43-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:S-adenosyl-L-methionine:S-adenosyl-L-methionine 3-amino-3-carboxypropyltransferase activity","type":"related"}],"termid":"GO:0030410"}


id: GO:0061017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a hepatoblast. A hepatoblast is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into hepatocytes and cholangiocytes.","definition_xrefs":["GOC:dph","PMID:15226394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatoblast differentiation","termid":"GO:0061017"}


id: GO:0099085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-[(3,5-dichloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one => 1-[(3-chloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one + Cl-.","definition_xrefs":["PMID:22035794","PMID:1521542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DIF dechlorinase activity","synonyms":[{"name":"1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one 3(5)-dechlorinase activity","type":"exact"},{"name":"1-[(3,5-dichloro-2,6-dihydroxy-4-methoxy)phenyl]hexan-1-one 3(5)-dechlorinase activity","type":"exact"},{"name":"DIF-1 3(5)-dechlorinase activity","type":"exact"},{"name":"DIF-1 dechlorinase activity","type":"exact"},{"name":"differentiation-inducing factor 1 dechlorinase activity","type":"exact"},{"name":"differentiation-inducing factor dechlorinase activity","type":"exact"}],"termid":"GO:0099085"}


id: MONDO:0030718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 67","secondary_identifiers":["DOID:0070566","OMIM:619803","UMLS:C5676947","MEDGEN:1804099"],"synonyms":[{"name":"SPGF67","type":"exact"},{"name":"spermatogenic failure 67","type":"exact"}],"termid":"MONDO:0030718","xrefs":{"Monarch":{"xref_id":"0030718"}}}


id: MONDO:1010035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mandibulofacial dysostosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibulofacial dysostosis, non-human animal","secondary_identifiers":["OMIA:002288"],"termid":"MONDO:1010035","xrefs":{"Monarch":{"xref_id":"1010035"}}}


id: GO:0090563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + sugar(out) = protein cysteine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0022857","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}


id: GO:0002619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of non-professional antigen presenting cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of non-professional antigen presenting cell antigen processing and presentation","termid":"GO:0002619"}


id: MONDO:0008694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoprogeria is characterized by intellectual deficit associated with progressive spastic quadriplegia, microcephaly, glaucoma, absence of the eyebrows and eyelashes, and a malformation of the nose. It has been described in two brothers.","definition_xrefs":["Orphanet:2985"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoprogeria syndrome","secondary_identifiers":["OMIM:200130","GARD:415","MESH:C563111","SCTID:733086003","UMLS:C0796125","MEDGEN:163218"],"synonyms":[{"name":"Hal-Berg-Rudolph syndrome","type":"exact"},{"name":"absent eyebrows and eyelashes with intellectual disability","type":"related"},{"name":"absent eyebrows and eyelashes with mental retardation","type":"related"},{"name":"absent eyebrows and eyelashes-intellectual disability syndrome","type":"exact"},{"name":"eyebrows and eyelashes absence-intellectual disability syndrome","type":"exact"},{"name":"intellectual disability, absence of eyebrows and eyelashes, progressive spastic quadriplegia, microcephaly, glaucoma, and small, beaked nose","type":"related"},{"name":"mental retardation, absence of eyebrows and eyelashes, progressive spastic quadriplegia, microcephaly, glaucoma, and small, beaked nose","type":"related"},{"name":"pseudoprogeria syndrome","type":"exact"}],"termid":"MONDO:0008694","xrefs":{"Monarch":{"xref_id":"0008694"}}}


id: PBO:0058917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12136","termid":"PBO:0058917"}


id: FYPO:0002387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at subtelomeres is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"decreased protein localization to telomere","termid":"FYPO:0003803"},{"relation_name":"is_a","term_name":"decreased protein localization to subtelomeric heterochromatin","termid":"FYPO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to heterochromatin at subtelomere during vegetative growth","type":"exact"},{"name":"decreased protein localization to subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to telomeric heterochromatin during vegetative growth","type":"related"},{"name":"reduced protein localization to subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0002387"}


id: GO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor of a target cell. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:12855817","PMID:15728447","PMID:12524386","GO_REF:0000022","GOC:add","PMID:15585605","ISBN:0781735149","PMID:12467241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-168898"],"synonyms":[{"name":"TLR signaling pathway","type":"exact"},{"name":"toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002224"}


id: GO:0015774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transport","termid":"GO:0008643"},{"relation_name":"part_of","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"polysaccharide transport","termid":"GO:0015774"}


id: MONDO:0004956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the prostate gland and has spread to other anatomic sites.","definition_xrefs":["NCIT:C8946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic prostate carcinoma","secondary_identifiers":["UMLS:C0936223","SCTID:314994000","EFO:0000196","ICD9:199.1","MEDGEN:215232"],"synonyms":[{"name":"metastatic prostate cancer","type":"exact"},{"name":"metastatic prostate carcinoma","type":"exact"},{"name":"prostate cancer metastatic","type":"exact"},{"name":"prostate carcinoma metastatic","type":"exact"}],"termid":"MONDO:0004956","xrefs":{"Monarch":{"xref_id":"0004956"}}}


id: PBO:0032730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Smp3 (predicted)","termid":"PBO:0032730"}


id: PBO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_fusion","termid":"PBO:0030947"}


id: PBO:0080496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor D and EGF domains","termid":"PBO:0080496"}


id: PBO:0054050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1392","termid":"PBO:0054050"}


id: PATO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of temperature.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of temperature","termid":"PATO:0001304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant temperature","termid":"PATO:0001314"}


id: PBO:0055443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2874","termid":"PBO:0055443"}


id: MONDO:0021367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The phase of chronic myeloid leukemia following the chronic phase (leukemia, myeloid, chronic-phase), where there are increased systemic symptoms, worsening cytopenias, and refractory leukocytosis.","definition_xrefs":["MESH:D015465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, BCR-ABL1 positive","termid":"MONDO:0011996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"leukemia, myeloid, accelerated-phase","secondary_identifiers":["NCIT:C3173","MEDGEN:6059","UMLS:C0023472"],"synonyms":[{"name":"Accelerated Phase CML","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia, BCR-ABL1 Positive","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukaemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukemia","type":"related"},{"name":"Aggressive-Phase CML","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukemia","type":"related"},{"name":"CML ACCELERATED","type":"related"},{"name":"CML AGGRESSIVE","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive Phase","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive-Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated-Phase","type":"related"},{"name":"Leukemia, Myeloid, Aggressive-Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive-Phase","type":"related"}],"termid":"MONDO:0021367","xrefs":{"Monarch":{"xref_id":"0021367"}}}


id: PR:P05733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3702 gene.","definition_xrefs":["UniProtKB:P05733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.05c","synonyms":[{"name":"L37-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3702","type":"exact"},{"name":"YL27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05733"}


id: PBO:0084111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heat shock protein that is highly induced upon stress; plays a role in SRP-dependent cotranslational protein-membrane targeting and translocation; member of the HSP70 family; cytoplasmic protein that concentrates in nuclei upon starvation; SSA4 has a paralog, SSA3, that arose from the whole genome duplication","termid":"PBO:0084111"}


id: PBO:0089273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic P body 3'-5'-exoribonuclease, Dis3L2-related","termid":"PBO:0089273"}


id: PBO:0064508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit I","termid":"PBO:0064508"}


id: GO:0075038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium maturation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium maturation (obsolete GO:0075038)","synonyms":[{"name":"negative regulation of appressorium maturation on or near host","type":"related"},{"name":"negative regulation of maturation of appressorium on or near host","type":"exact"}],"termid":"GO:0075038"}


id: CHEBI:25255
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl methanesulfonate","termid":"CHEBI:25255"}


id: PATO:0000669
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000669 concentration_unit (obsolete PATO:0000669)","termid":"PATO:0000669"}


id: GO:0005617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete larval serum protein-1 (obsolete GO:0005617)","synonyms":[{"name":"LSP1","type":"exact"},{"name":"larval serum protein-1","type":"exact"}],"termid":"GO:0005617"}


id: GO:0005639
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear inner membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of nuclear inner membrane (obsolete GO:0005639)","synonyms":[{"name":"integral to nuclear inner membrane","type":"narrow"}],"termid":"GO:0005639"}


id: GO:0009063
data:
  {"annotated_genes":["SJAG_02496","SJAG_02235","SJAG_03398","SJAG_02734","SJAG_00937","SJAG_03434","SJAG_03641","SJAG_03861","SJAG_02901","SJAG_00674","SJAG_02450","SJAG_00944","SJAG_03293","SJAG_00714","SJAG_04827","SJAG_01903","SJAG_03743","SJAG_04145","SJAG_04842","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[70838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[78648,113510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[71533,74231,71896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[71275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[80738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[79298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[88761,87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[80015,92046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[78318,74548,96739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[68907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[78374,70616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[72343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[73441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00674":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02734":null,"SJAG_02901":null,"SJAG_03293":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03743":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04827":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"amino acid breakdown","type":"exact"},{"name":"amino acid catabolism","type":"exact"},{"name":"amino acid degradation","type":"exact"},{"name":"cellular amino acid catabolic process","type":"exact"}],"termid":"GO:0009063","terms_by_termid":{"GO:0000949":null,"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0019547":null,"GO:0036088":null,"GO:0042853":null}}


id: PBO:0087290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA1 at HML; ALPHA1 encodes a transcriptional coactivator involved in the regulation of mating-type alpha-specific gene expression","termid":"PBO:0087290"}


id: PBO:0067893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 195","termid":"PBO:0067893"}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: SO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which increases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_translational_product_level","synonyms":[{"name":"increase translational product level","type":"exact"}],"termid":"SO:0001556"}


id: MONDO:0014614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital stationary night blindness characterized by autosomal recessive inheritance that has material basis in homozygous mutation in the GNAT1 gene on chromosome 3p21.","definition_xrefs":["PMID:22190596","DOID:0110714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"congenital stationary night blindness 1G","secondary_identifiers":["GARD:16099","OMIM:616389","UMLS:C4225345","MEDGEN:906532"],"synonyms":[{"name":"CSNB1G","type":"exact"},{"name":"congenital stationary night blindness type 1G","type":"exact"},{"name":"night blindness, congenital stationary, type 1G","type":"related"}],"termid":"MONDO:0014614","xrefs":{"Monarch":{"xref_id":"0014614"}}}


id: FYPO:0005941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["PomBase:mah","GO:1990898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break clipping","termid":"FYPO:0005941"}


id: PBO:0042489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 12 pseudogene 2","termid":"PBO:0042489"}


id: PR:Q9URW7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URW7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.01c","synonyms":[{"name":"Spom972h-vps17","type":"exact"}],"termid":"PR:Q9URW7"}


id: GO:0035873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which lactate is transported across a membrane. Lactate is 2-hydroxypropanoate, CH3-CHOH-COOH; L(+)-lactate is formed by anaerobic glycolysis in animal tissues, and DL-lactate is found in sour milk, molasses and certain fruit juices.","definition_xrefs":["GOC:mcc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate transport","termid":"GO:0015727"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"lactate transmembrane transport","synonyms":[{"name":"lactate membrane transport","type":"exact"}],"termid":"GO:0035873"}


id: GO:2000317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"negatively_regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T-helper 17 type immune response","synonyms":[{"name":"negative regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000317"}


id: GO:0048237
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the rough endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"rough endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao1819509473"],"synonyms":[{"name":"RER lumen","type":"exact"},{"name":"rough ER lumen","type":"exact"}],"termid":"GO:0048237"}


id: PBO:0044897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPTOR antisense RNA 1","termid":"PBO:0044897"}


id: MONDO:0033201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 57","secondary_identifiers":["DOID:0111635","UMLS:C4693893","OMIM:618003","MEDGEN:1631180"],"synonyms":[{"name":"DFNB57","type":"narrow"},{"name":"deafness, autosomal recessive 57","type":"narrow"},{"name":"hearing loss, autosomal recessive 57","type":"exact"}],"termid":"MONDO:0033201","xrefs":{"Monarch":{"xref_id":"0033201"}}}


id: GO:0042275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA via processes such as template switching, which does not remove the replication-blocking lesions but does not increase the endogenous mutation rate.","definition_xrefs":["GOC:jl","GOC:elh","PMID:11459630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postreplication repair","termid":"GO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"error-free postreplication DNA repair","synonyms":[{"name":"error-free PRR","type":"exact"},{"name":"error-free replication restart","type":"related"}],"termid":"GO:0042275"}


id: MONDO:0007147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cessation of air flow during sleep due to upper airway obstruction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sleep apnea syndrome","termid":"MONDO:0005296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstructive sleep apnea syndrome","secondary_identifiers":["OMIM:107650","DOID:0050848","EFO:0003918","ICD9:327.23","ICD9:780.57","MEDGEN:101045","UMLS:C0520679","MESH:D020181","HP:0002870","ICD10CM:G47.33","NCIT:C27168","SCTID:78275009"],"synonyms":[{"name":"Apneas, obstructive sleep","type":"related"},{"name":"OSAHS","type":"related"},{"name":"Osa","type":"related"},{"name":"apnea, obstructive sleep","type":"related"},{"name":"obstructive sleep Apneas","type":"related"},{"name":"obstructive sleep apnea","type":"exact"},{"name":"obstructive sleep apnea syndrome","type":"exact"},{"name":"sleep Apneas, obstructive","type":"related"},{"name":"sleep apnea hypopnea syndrome","type":"related"},{"name":"sleep apnea syndrome, obstructive","type":"related"},{"name":"sleep apnea/hypopnea syndrome","type":"related"},{"name":"syndrome, obstructive sleep apnea","type":"related"},{"name":"syndrome, sleep apnea, obstructive","type":"related"},{"name":"syndrome, upper airway resistance, sleep apnea","type":"related"},{"name":"upper airway resistance sleep apnea syndrome","type":"related"}],"termid":"MONDO:0007147","xrefs":{"Monarch":{"xref_id":"0007147"}}}


id: PBO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10","termid":"PBO:0047419"}


id: GO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0815316208","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole","synonyms":[{"name":"vacuole, cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000325"}


id: GO:0097021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.","definition_xrefs":["GOC:BHF","GOC:pr","PMID:18379575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte migration","termid":"GO:0072676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration into lymphoid organs","synonyms":[{"name":"lymphocyte homing","type":"narrow"}],"termid":"GO:0097021"}


id: GO:0048074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"negatively_regulates","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eye pigmentation","synonyms":[{"name":"down regulation of eye pigmentation","type":"exact"},{"name":"down-regulation of eye pigmentation","type":"exact"},{"name":"downregulation of eye pigmentation","type":"exact"},{"name":"inhibition of eye pigmentation","type":"narrow"}],"termid":"GO:0048074"}


id: MONDO:0003274
data:
  {"annotated_genes":["SJAG_01410","SJAG_03720","SJAG_03453","SJAG_04394","SJAG_02426","SJAG_04502","SJAG_00229","SJAG_04114","SJAG_04206","SJAG_00757","SJAG_00079","SJAG_03689","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86551,86552,87673,87671,86550,87672,87669,86548,86549,87670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[87156,87157,87688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the tissues of the thorax.","definition_xrefs":["NCIT:C3576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00229":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thoracic cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:5093","MEDGEN:56320","SCTID:188361007","ICD9:195.1","UMLS:C0153661"],"synonyms":[{"name":"cancer of thoracic segment of trunk","type":"exact"},{"name":"malignant neoplasm of the thorax","type":"exact"},{"name":"malignant neoplasm of thoracic segment of trunk","type":"exact"},{"name":"malignant neoplasm of thorax","type":"exact"},{"name":"malignant thoracic neoplasm","type":"exact"},{"name":"malignant thoracic segment of trunk neoplasm","type":"exact"},{"name":"malignant thoracic tumor","type":"exact"},{"name":"malignant thoracic tumour","type":"exact"},{"name":"malignant tumor of the thorax","type":"exact"},{"name":"malignant tumor of thorax","type":"exact"},{"name":"malignant tumour of the thorax","type":"exact"},{"name":"malignant tumour of thorax","type":"exact"},{"name":"thoracic segment of trunk cancer","type":"exact"},{"name":"thoracic tumor","type":"broad"},{"name":"thoracic tumour","type":"broad"},{"name":"thorax cancer","type":"exact"},{"name":"thorax neoplasm","type":"broad"},{"name":"tumor of thorax","type":"broad"},{"name":"tumour of thorax","type":"broad"}],"termid":"MONDO:0003274","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null,"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0003274"}}}


id: MONDO:1012028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bleeding disorder, non-human animal","termid":"MONDO:1011685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bleeding disorder, domestic cat","secondary_identifiers":["OMIA:000113-9685"],"termid":"MONDO:1012028","xrefs":{"Monarch":{"xref_id":"1012028"}}}


id: GO:0042037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-L-histidine to form peptidyl-L-3'-methyl-L-histidine (otherwise known as pi-methylhistidine, pros-methylhistidine).","definition_xrefs":["RESID:AA0073"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine methylation, to form pros-methylhistidine (obsolete GO:0042037)","synonyms":[{"name":"peptidyl-histidine pros-methylation","type":"exact"}],"termid":"GO:0042037"}


id: MONDO:1010113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glucocorticoid resistance that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid resistance, non-human animal","secondary_identifiers":["OMIA:002254"],"termid":"MONDO:1010113","xrefs":{"Monarch":{"xref_id":"1010113"}}}


id: GO:0071182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch4 (ICN4), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN4 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch4 complex","type":"exact"}],"termid":"GO:0071182"}


id: GO:0090659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism relating to the progression of that organism along the ground by the process of lifting and setting down each leg.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"walking behavior","synonyms":[{"name":"locomotor gait pattern","type":"narrow"}],"termid":"GO:0090659"}


id: GO:0032977
data:
  {"annotated_genes":["SJAG_05300","SJAG_03633","SJAG_02065","SJAG_01496","SJAG_00277","SJAG_02437","SJAG_00569","SJAG_01240","SJAG_05302","SJAG_00687","SJAG_02361","SJAG_01940","SJAG_01178"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74788,78852,78900,88265,88290,93130,95168,103829,110721,111314,112102,112560,114433],"is_not":false,"summary":null,"term":"GO:0032977"}]},"cv_name":"molecular_function","definition":"Binds transmembrane domain-containing proteins and mediates their integration into a membrane.","definition_xrefs":["PMID:30415835","PMID:14739936","PMID:32459176","PMID:29809151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00277":null,"SJAG_00569":null,"SJAG_00687":null,"SJAG_01178":null,"SJAG_01240":null,"SJAG_01496":null,"SJAG_01940":null,"SJAG_02065":null,"SJAG_02361":null,"SJAG_02437":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0003674","GO:0140597","GO:0140104"],"is_obsolete":false,"name":"membrane insertase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9906955","Reactome:R-HSA-1268025","Reactome:R-HSA-9902096","Reactome:R-HSA-1307803","Reactome:R-HSA-1299482"],"termid":"GO:0032977","terms_by_termid":{"GO:0032977":null}}


id: MONDO:0013645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive syndromic cerebellar ataxia in which the cause of the disease is a mutation in the SYT14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 11","secondary_identifiers":["DOID:0080063","GARD:17312","UMLS:C5190803","OMIM:614229","MEDGEN:1681191","Orphanet:284271"],"synonyms":[{"name":"SCAR11","type":"exact"},{"name":"SYT14 autosomal recessive syndromic cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-psychomotor retardation syndrome","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia 11","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 11","type":"exact"},{"name":"autosomal recessive syndromic cerebellar ataxia caused by mutation in SYT14","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 11","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 11","type":"exact"}],"termid":"MONDO:0013645","xrefs":{"Monarch":{"xref_id":"0013645"}}}


id: GO:0032639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of TRAIL due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:9311998","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"TRAIL production","secondary_identifiers":["GO:0045553"],"synonyms":[{"name":"TRAIL biosynthetic process","type":"narrow"}],"termid":"GO:0032639"}


id: MONDO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"glutaric aciduria","secondary_identifiers":["MEDGEN:75695","ICD9:270.8","SCTID:28987007","HP:0003530","UMLS:C0268594","HP:0003150"],"synonyms":[{"name":"glutaric acidemia","type":"exact"},{"name":"glutaric aciduria","type":"exact"},{"name":"glutaric aciduria (disease)","type":"exact"}],"termid":"MONDO:0000129","xrefs":{"Monarch":{"xref_id":"0000129"}}}


id: GO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fusion of the synaptic vesicle with the postsynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle fusion (obsolete GO:0016083)","synonyms":[{"name":"synaptic vesicle fusion","type":"exact"}],"termid":"GO:0016083"}


id: PR:O13855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1A6.01c gene.","definition_xrefs":["UniProtKB:O13855","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.01c","synonyms":[{"name":"Spom972h-SPAC1A6.01c","type":"exact"}],"termid":"PR:O13855"}


id: CHEBI:32035
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium hydroxide","termid":"CHEBI:32035"}


id: GO:0072047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in nephron development","type":"exact"},{"name":"proximal/distal nephron patterning","type":"exact"}],"termid":"GO:0072047"}


id: PBO:0087369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT methyltransferase; catalyzes omega-monomethylation of Rps3p on Arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism","termid":"PBO:0087369"}


id: GO:0018947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving organosilicons, organic compounds that contain silicon, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organosilicon metabolic process","termid":"GO:0018945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic organosilicon metabolic process","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"anaerobic organosilicon metabolism","type":"exact"},{"name":"anaerobic organosilicone metabolic process","type":"exact"},{"name":"anaerobic organosilicone metabolism","type":"exact"}],"termid":"GO:0018947"}


id: MONDO:0100185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory condition that arises after initiating antiretroviral therapy (ART) therapy in HIV-infected patients that results from restored immunity to specific infectious or non-infectious antigens.","definition_xrefs":["PMID:22121257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune reconstitution inflammatory syndrome","secondary_identifiers":["MESH:D054019","NCIT:C125712","UMLS:C1619738","MEDGEN:295297","icd11.foundation:180703474"],"synonyms":[{"name":"IRD","type":"exact"},{"name":"IRIS","type":"exact"},{"name":"IRS","type":"exact"},{"name":"immune reconstitution inflammatory syndrome associated with Kaposi sarcoma","type":"narrow"},{"name":"immune reconstitution syndrome","type":"exact"},{"name":"immune restoration disease","type":"exact"}],"termid":"MONDO:0100185","xrefs":{"Monarch":{"xref_id":"0100185"}}}


id: MONDO:0023558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kocher-debre-Semelaigne syndrome","secondary_identifiers":["icd11.foundation:109007822","MESH:C537211"],"synonyms":[{"name":"Kocher debre Semelaigne disease","type":"related"},{"name":"association of muscular pseudohypertrophy and hypothyroidism in children","type":"related"}],"termid":"MONDO:0023558","xrefs":{"Monarch":{"xref_id":"0023558"}}}


id: GO:1901224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the non-canonical NF-kappaB cascade.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of non-canonical NF-kappaB signal transduction","termid":"GO:1901222"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"non-canonical NF-kappaB signal transduction","termid":"GO:0038061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of non-canonical NF-kappaB signal transduction","secondary_identifiers":["GO:0042346","GO:0008588"],"synonyms":[{"name":"activation of NIK/NF-kappaB cascade","type":"narrow"},{"name":"activation of non-canonical NF-KB signaling","type":"exact"},{"name":"activation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"activation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"activation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"positive regulation of NF-kappaB import into nucleus","type":"narrow"},{"name":"positive regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"positive regulation of NIK/NF-kappaB signaling","type":"exact"},{"name":"positive regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"positive regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"positive regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"positive regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"up regulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"up regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"up regulation of noncanonical NF-kappaB signaling","type":"exact"},{"name":"up regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"up regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"up-regulation of NIK/NF-kappaB cascade","type":"related"},{"name":"up-regulation of non-canonical NF-KB signaling","type":"exact"},{"name":"up-regulation of noncanonical NF-kappaB signaling","type":"broad"},{"name":"up-regulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"up-regulation of p52-dependent NF-kappaB signaling","type":"narrow"},{"name":"upregulation of NIK/NF-kappaB cascade","type":"exact"},{"name":"upregulation of non-canonical NF-KB signaling","type":"exact"},{"name":"upregulation of noncanonical NF-kappaB signaling","type":"broad"},{"name":"upregulation of noncanonical nuclear factor kappaB (NF-kappaB) pathway","type":"exact"},{"name":"upregulation of p52-dependent NF-kappaB signaling","type":"narrow"}],"termid":"GO:1901224"}


id: GO:0102327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxoacyl-CoA = H+ + coenzyme A + a 3-oxoacid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxoacyl-CoA hydrolase activity (obsolete GO:0102327)","termid":"GO:0102327"}


id: MONDO:0011290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dislocated elbows, bowed tibias, scoliosis, deafness, cataract, microcephaly, and intellectual disability","secondary_identifiers":["OMIM:603133","MESH:C566408","UMLS:C1864183","MEDGEN:350359"],"synonyms":[{"name":"dislocated elbows, bowed tibias, scoliosis, deafness, cataract, microcephaly, and intellectual disability","type":"exact"},{"name":"dislocated elbows, bowed tibias, scoliosis, deafness, cataract, microcephaly, and mental retardation","type":"exact"}],"termid":"MONDO:0011290","xrefs":{"Monarch":{"xref_id":"0011290"}}}


id: PBO:0043167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated kinase 1","termid":"PBO:0043167"}


id: MONDO:0002166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the rectum. The majority are B-cell non-Hodgkin lymphomas.","definition_xrefs":["NCIT:C5553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"},{"relation_name":"is_a","term_name":"colorectal lymphoma","termid":"MONDO:0024656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"rectum lymphoma","secondary_identifiers":["UMLS:C1335685","DOID:1988","MEDGEN:233393"],"synonyms":[{"name":"lymphoma of rectum","type":"exact"},{"name":"lymphoma of the rectum","type":"exact"},{"name":"primary rectal lymphoma","type":"exact"},{"name":"rectal lymphoma","type":"exact"},{"name":"rectum lymphoma","type":"exact"}],"termid":"MONDO:0002166","xrefs":{"Monarch":{"xref_id":"0002166"}}}


id: PBO:0052483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8B","termid":"PBO:0052483"}


id: GO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide to the antigen binding groove of an MHC protein complex.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"MHC protein complex assembly","termid":"GO:0002396"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"}


id: GO:1902490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sperm capacitation.","definition_xrefs":["GOC:TermGenie","PMID:22539676","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of cell maturation","termid":"GO:1903429"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sperm capacitation","synonyms":[{"name":"regulation of sperm activation","type":"related"}],"termid":"GO:1902490"}


id: PR:O42945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03207","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.10c","secondary_identifiers":["UniProtKB:O42945"],"synonyms":[{"name":"Spom972h-DHX15","type":"exact"}],"termid":"PR:O42945"}


id: PBO:0050322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 24","termid":"PBO:0050322"}


id: PBO:0055419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2849","termid":"PBO:0055419"}


id: PBO:0075274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 27","termid":"PBO:0075274"}


id: PBO:0029698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_multiseptate_vegetative_cell","termid":"PBO:0029698"}


id: PBO:0114651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Age1","termid":"PBO:0114651"}


id: PBO:0050282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme oxygenase 2","termid":"PBO:0050282"}


id: GO:0042583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialized secretory vesicle found in the cells of adrenal glands and various other organs, which is concerned with the synthesis, storage, metabolism, and secretion of epinephrine and norepinephrine.","definition_xrefs":["PMID:19158310","PMID:1961743","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chromaffin granule","termid":"GO:0042583"}


id: MONDO:0024471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-inflammatory vasculopathy (obsolete MONDO:0024471)","secondary_identifiers":["Orphanet:496924"],"termid":"MONDO:0024471","xrefs":{"Monarch":{"xref_id":"0024471"}}}


id: GO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP1 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TAP1 binding","termid":"GO:0046978"}


id: PBO:0050818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 3","termid":"PBO:0050818"}


id: MONDO:0010600
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86417],"is_not":false,"summary":null,"term":"MONDO:0010600"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulomatous disease, chronic, X-linked","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15294","DOID:0070190","OMIM:306400","MEDGEN:336165","OMIM:138990","MESH:C564210","DOID:0070195","UMLS:C1844376"],"synonyms":[{"name":"CDGX","type":"exact"},{"name":"CGD","type":"exact"},{"name":"chronic granulomatous disease, X-linked","type":"exact"},{"name":"chronic granulomatous disease, X-linked, X-linked recessive","type":"exact"},{"name":"chronic granulomatous disease, atypical","type":"exact"},{"name":"cytochrome B-negative granulomatous disease, chronic, X-linked","type":"exact"},{"name":"cytochrome B-positive granulomatous disease, chronic, X-linked","type":"exact"},{"name":"granulomatous disease, chronic, X-linked","type":"exact"},{"name":"granulomatous disease, chronic, X-linked, variant","type":"exact"},{"name":"granulomatous disease, chronic, autosomal dominant type","type":"exact"}],"termid":"MONDO:0010600","terms_by_termid":{"MONDO:0010600":null},"xrefs":{"Monarch":{"xref_id":"0010600"}}}


id: PBO:0065068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein HaeIII subfamily 2","termid":"PBO:0065068"}


id: PBO:0078640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triple QxxK/R motif containing","termid":"PBO:0078640"}


id: PBO:0081487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 383","termid":"PBO:0081487"}


id: GO:0019005
data:
  {"annotated_genes":["SJAG_02651","SJAG_00192","SJAG_03651","SJAG_00439","SJAG_03219","SJAG_01022","SJAG_02044","SJAG_00341","SJAG_02822","SJAG_02162","SJAG_00615","SJAG_02591"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74357,80618,88901,95873,98778,103184],"is_not":false,"summary":null,"term":"GO:0019005"},{"annotations":[94685,90941,110630,98098,105185,109388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_01022":null,"SJAG_02044":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SCF_complex"],"synonyms":[{"name":"CDL1 complex","type":"exact"},{"name":"CRL1 complex","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex","type":"exact"},{"name":"SCF complex","type":"exact"},{"name":"SCF complex substrate recognition subunit","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cullin-RING ligase 1","type":"exact"}],"termid":"GO:0019005","terms_by_termid":{"GO:0019005":null,"GO:0043224":null}}


id: GO:0008358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by gradients of maternally-transcribed gene products; exemplified in insects by the morphogens, bicoid and nanos.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal determination of anterior/posterior axis, embryo","termid":"GO:0008358"}


id: MONDO:0100519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 17","secondary_identifiers":["MEDGEN:1794141","UMLS:C5561931","OMIM:602477"],"synonyms":[{"name":"EIG17","type":"exact"}],"termid":"MONDO:0100519","xrefs":{"Monarch":{"xref_id":"0100519"}}}


id: PBO:0068300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 6","termid":"PBO:0068300"}


id: GO:0008162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclodiene resistance (obsolete GO:0008162)","synonyms":[{"name":"cyclodiene resistance","type":"exact"}],"termid":"GO:0008162"}


id: PBO:0081839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 774","termid":"PBO:0081839"}


id: FYECO:0000175
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CdCl2","synonyms":[{"name":"+ cadmium chloride","type":"exact"}],"termid":"FYECO:0000175"}


id: PBO:0090405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidyl transferase Rev1","termid":"PBO:0090405"}


id: PBO:0041730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase II inhibitor 1","termid":"PBO:0041730"}


id: MONDO:1011946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital joint laxity and dwarfism, non-human animal","secondary_identifiers":["OMIA:000570"],"termid":"MONDO:1011946","xrefs":{"Monarch":{"xref_id":"1011946"}}}


id: PBO:0075468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 19","termid":"PBO:0075468"}


id: PBO:0061297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptides B and W receptor 2","termid":"PBO:0061297"}


id: PBO:0089183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Chl1","termid":"PBO:0089183"}


id: GO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"negatively_regulates","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of dendritic cell cytokine production","synonyms":[{"name":"down regulation of dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of dendritic cell cytokine production","type":"exact"},{"name":"downregulation of dendritic cell cytokine production","type":"exact"},{"name":"inhibition of dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002731"}


id: PR:000044702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht2/Me(K9)","termid":"PR:000027593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044702"}


id: SO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heterochromatic region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes and it is transcribed.","definition_xrefs":["POMBE:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtelomere","termid":"SO:0001997"}


id: PATO:0002390
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A length quality which is equal to the length of any straight line segment that passes from the center of a circle to any endpoint on the circular boundary. The radius is half of the diameter.","definition_xrefs":["PATO:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radius","termid":"PATO:0002390"}


id: PBO:0053377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 303","termid":"PBO:0053377"}


id: FYPO:0007485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nucleation of spindle microtubules from the new spindle pole body does not occur during the second meiotic nuclear division.","definition_xrefs":["PMID:27889481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis II","termid":"FYPO:0004510"},{"relation_name":"is_a","term_name":"abnormal microtubule nucleation","termid":"FYPO:0007484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished meiotic spindle microtubule nucleation from new spindle pole body during meiosis II","synonyms":[{"name":"abolished meiotic spindle microtubule nucleation from new SPB during meiosis II","type":"exact"},{"name":"abolished meiotic spindle microtubule nucleation from new spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"abolished spindle microtubule nucleation from new spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0007485"}


id: PBO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothetical protein","termid":"PBO:0000074"}


id: MONDO:0014763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bombay phenotype (obsolete MONDO:0014763)","secondary_identifiers":["OMIM:616754"],"synonyms":[{"name":"Bombay phenotype","type":"exact"},{"name":"Bombay phenotype, digenic","type":"exact"},{"name":"Reunion variant","type":"related"},{"name":"para-Bombay phenotype","type":"related"}],"termid":"MONDO:0014763","xrefs":{"Monarch":{"xref_id":"0014763"}}}


id: GO:0019649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pathways in which formaldehyde is processed and used as a carbon source for the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde assimilation","termid":"GO:0019649"}


id: PBO:0083630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domain-containing protein; involved in regulating phosphatidylinositol 4,5-bisphosphate levels and autophagy; Irs4p and Tax4p bind and activate the PtdIns phosphatase Inp51p; Irs4p and Tax4p are involved in localizing Atg17p to the PAS; IRS4 has a paralog, TAX4, that arose from the whole genome duplication","termid":"PBO:0083630"}


id: PBO:0082669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the DNA ligase IV complex; this complex mediates nonhomologous end joining in DNA double-strand break repair; sumoylated by Siz1p and Nfi1p SUMO ligases on Lys301; physically interacts with Dnl4p and Nej1p; homologous to mammalian XRCC4 protein","termid":"PBO:0082669"}


id: MONDO:0015925
data:
  {"annotated_genes":["SJAG_00570","SJAG_03855","SJAG_02194","SJAG_03125","SJAG_05979","SJAG_02805","SJAG_00566","SJAG_02206","SJAG_03626","SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010926"},{"annotations":[85419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[86554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957261"},{"annotations":[86914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957263"},{"annotations":[86683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957294"},{"annotations":[86514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013878"},{"annotations":[85644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014612"},{"annotations":[87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030690"},{"annotations":[87400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[86216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"}]},"cv_name":"mondo","definition":"A diverse group of lung diseases that affect the lung parenchyma. They are characterized by an initial inflammation of pulmonary alveoli that extends to the interstitium and beyond leading to diffuse pulmonary fibrosis. Interstitial lung diseases are classified by their etiology (known or unknown causes), and radiological-pathological features.","definition_xrefs":["MESH:D017563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00566":null,"SJAG_00570":null,"SJAG_01836":null,"SJAG_02194":null,"SJAG_02206":null,"SJAG_02805":null,"SJAG_03125":null,"SJAG_03626":null,"SJAG_03855":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"interstitial lung disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C164315","EFO:0004244","DOID:3082","MEDGEN:1788738","SCTID:233703007","ICD10CM:J80-J84","MedDRA:10022611","Orphanet:182095","UMLS:C5441745"],"synonyms":[{"name":"ILD","type":"exact"},{"name":"interstitial lung disease","type":"exact"}],"termid":"MONDO:0015925","terms_by_termid":{"MONDO:0010926":null,"MONDO:0011871":null,"MONDO:0013878":null,"MONDO:0014612":null,"MONDO:0030690":null,"MONDO:0100215":null,"MONDO:0100220":null,"MONDO:0800029":null,"MONDO:0957261":null,"MONDO:0957263":null,"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0015925"}}}


id: PBO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit (predicted)","termid":"PBO:0002407"}


id: MONDO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Aspergillus niger.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspergillus niger infection","secondary_identifiers":["UMLS:C0276657","MEDGEN:82916","GARD:9716","MESH:C535390"],"synonyms":[{"name":"Aspergillus niger infection","type":"exact"},{"name":"Aspergillus niger infection, pulmonary","type":"related"},{"name":"infections, Aspergillus niger","type":"related"}],"termid":"MONDO:0021935","xrefs":{"Monarch":{"xref_id":"0021935"}}}


id: MONDO:0012702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 6","secondary_identifiers":["UMLS:C1969030","OMIM:611598","MEDGEN:369397"],"synonyms":[{"name":"CELIAC6","type":"exact"},{"name":"autoimmune disease, susceptibility to, 5","type":"related"},{"name":"celiac disease, susceptibility to, 6","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 6","type":"related"}],"termid":"MONDO:0012702","xrefs":{"Monarch":{"xref_id":"0012702"}}}


id: PATO:0001859
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"coordinated","termid":"PATO:0000769"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased coordination","synonyms":[{"name":"high coordination","type":"exact"}],"termid":"PATO:0001859"}


id: MONDO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of mitral valve disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inherited mitral valve disease","secondary_identifiers":["MEDGEN:539532","UMLS:C0265845","SCTID:75372006"],"synonyms":[{"name":"congenital anomaly of mitral valve","type":"exact"},{"name":"congenital malformation of mitral valve","type":"related"},{"name":"congenital mitral valve abnormality","type":"related"},{"name":"hereditary mitral valve disease","type":"exact"}],"termid":"MONDO:0042966","xrefs":{"Monarch":{"xref_id":"0042966"}}}


id: MONDO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of idiopathic torsion dystonia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic torsion dystonia","termid":"MONDO:0044811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"acquired idiopathic torsion dystonia","secondary_identifiers":["MEDGEN:98279","UMLS:C0393601","SCTID:230321007","NCIT:C35438"],"synonyms":[{"name":"acquired idiopathic torsion dystonia","type":"exact"},{"name":"idiopathic non-familial dystonia","type":"exact"},{"name":"non-Familial Idiopathic dystonia","type":"exact"}],"termid":"MONDO:0044817","xrefs":{"Monarch":{"xref_id":"0044817"}}}


id: GO:0030578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia).","definition_xrefs":["PMID:10806078","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"PML body organization","synonyms":[{"name":"PML body organisation","type":"exact"},{"name":"PML body organization and biogenesis","type":"related"}],"termid":"GO:0030578"}


id: PBO:0083430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YER076C","termid":"PBO:0083430"}


id: MONDO:0008277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that arises from the stomach. This category includes neoplastic polyps (intestinal-type adenomatous polyps, gastric-type adenomas, and fundic gland polyps), and non-neoplastic polyps (hyperplastic polyps and hamartomatous polyps).","definition_xrefs":["NCIT:C3954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"stomach polyp","secondary_identifiers":["MESH:C562464","MEDGEN:68629","UMLS:C0236048","SCTID:87252009"],"synonyms":[{"name":"gastric polyp","type":"exact"},{"name":"gastric polyposa","type":"exact"},{"name":"gastric polyposis","type":"related"},{"name":"polyps of stomach","type":"exact"},{"name":"polyps of the stomach","type":"exact"}],"termid":"MONDO:0008277","xrefs":{"Monarch":{"xref_id":"0008277"}}}


id: PBO:0036124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcriptional_repression_at_centromere_central_core","termid":"PBO:0036124"}


id: PBO:0068154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 461","termid":"PBO:0068154"}


id: GO:0048807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of female genitalia are generated and organized.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"part_of","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female genitalia morphogenesis","synonyms":[{"name":"female genital morphogenesis","type":"related"}],"termid":"GO:0048807"}


id: PBO:0078547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 38","termid":"PBO:0078547"}


id: PATO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased avidity","termid":"PATO:0002075"}


id: GO:0045507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-25 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 receptor activity","termid":"GO:0030368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-25 receptor activity","synonyms":[{"name":"IL-25 receptor activity","type":"exact"},{"name":"IL-25R","type":"exact"}],"termid":"GO:0045507"}


id: MONDO:0002975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises usually from the breast skin and less often from the breast glandular tissue. Primary breast melanomas are rare.","definition_xrefs":["NCIT:C8410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"},{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant breast melanoma","secondary_identifiers":["DOID:4364","UMLS:C0346787","SCTID:188050009","MEDGEN:138069"],"synonyms":[{"name":"breast melanoma","type":"exact"},{"name":"breast melanoma (disease)","type":"exact"},{"name":"malignant breast melanoma","type":"exact"},{"name":"malignant melanoma of breast","type":"exact"},{"name":"malignant melanoma of the breast","type":"exact"},{"name":"melanoma (disease) of breast","type":"exact"}],"termid":"MONDO:0002975","xrefs":{"Monarch":{"xref_id":"0002975"}}}


id: GO:0051758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of homologous chromosomes from the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during meiosis I anaphase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"homologous chromosome movement towards spindle pole in meiosis I anaphase","synonyms":[{"name":"homologous chromosome movement towards spindle pole during meiosis I","type":"related"},{"name":"meiosis I, homologous chromosome movement towards spindle pole","type":"exact"}],"termid":"GO:0051758"}


id: GO:0090133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the population of cells that make up a mesendoderm undergo directed movement. The mesendoderm is the epithelial tissue that gives rise to both mesoderm and endoderm.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium migration","termid":"GO:0090132"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"},{"relation_name":"part_of","term_name":"mesendoderm development","termid":"GO:0048382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesendoderm migration","termid":"GO:0090133"}


id: PBO:0031258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0031258"}


id: GO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2.","definition_xrefs":["GOC:jl","Wikipedia:Alkyne","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkyne metabolic process","termid":"GO:0043452"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkyne biosynthetic process","synonyms":[{"name":"alkyne anabolism","type":"exact"},{"name":"alkyne biosynthesis","type":"exact"},{"name":"alkyne formation","type":"exact"},{"name":"alkyne synthesis","type":"exact"}],"termid":"GO:0043453"}


id: PBO:0046709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 7","termid":"PBO:0046709"}


id: PBO:0090770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF34 family protein","termid":"PBO:0090770"}


id: GO:1904874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase RNA localization to Cajal body.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_telomere","PMID:25467444","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of telomerase RNA localization to Cajal body","termid":"GO:1904872"},{"relation_name":"positively_regulates","term_name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomerase RNA localization to Cajal body","synonyms":[{"name":"activation of telomerase RNA localization to Cajal body","type":"narrow"},{"name":"up regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"up-regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"upregulation of telomerase RNA localization to Cajal body","type":"exact"}],"termid":"GO:1904874"}


id: GO:1902672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:5961344","PMID:16607022","GO_REF:0000064","GOC:giardia","GOC:TermGenie","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right anterior flagellum","termid":"GO:0097555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"right anterior basal body","synonyms":[{"name":"cilial basal body of right anterior cilium","type":"exact"},{"name":"cilial basal body of right anterior flagellum","type":"exact"},{"name":"ciliary basal body of right anterior cilium","type":"exact"},{"name":"ciliary basal body of right anterior flagellum","type":"exact"},{"name":"cilium basal body of right anterior cilium","type":"exact"},{"name":"cilium basal body of right anterior flagellum","type":"exact"},{"name":"microtubule basal body of right anterior cilium","type":"exact"},{"name":"microtubule basal body of right anterior flagellum","type":"exact"},{"name":"right anterior flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902672"}


id: GO:0001217
data:
  {"annotated_genes":["SJAG_03473","SJAG_00987","SJAG_04584","SJAG_05343","SJAG_00792","SJAG_04009","SJAG_04813","SJAG_02898","SJAG_02730","SJAG_02048","SJAG_00124"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116375,104770,94401,80789,111197,106574,109124,93645,104765,95062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[96726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02048":null,"SJAG_02730":null,"SJAG_02898":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003700","GO:0140110","GO:0003674"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001219","GO:0001218","GO:0001220","GO:0001141"],"synonyms":[{"name":"bacterial-type DNA binding transcription repressor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, cadmium ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, copper ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding","type":"narrow"},{"name":"cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001217","terms_by_termid":{"GO:0001227":null,"GO:0106250":null}}


id: PBO:0076082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin","termid":"PBO:0076082"}


id: PBO:0053689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 882","termid":"PBO:0053689"}


id: GO:1990627
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105227],"is_not":false,"summary":null,"term":"GO:1990627"}]},"cv_name":"biological_process","definition":"The membrane organization process that joins two mitochondrial inner membranes to form a single membrane.","definition_xrefs":["PMID:17055438","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane organization","termid":"GO:0007007"},{"relation_name":"part_of","term_name":"mitochondrial fusion","termid":"GO:0008053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"mitochondrial inner membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrion inner membrane fusion","type":"exact"}],"termid":"GO:1990627","terms_by_termid":{"GO:1990627":null}}


id: PBO:0051135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-7","termid":"PBO:0051135"}


id: MONDO:0007923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly, benign familial","secondary_identifiers":["MEDGEN:113101","MESH:C537717","OMIM:153470","UMLS:C0220690"],"synonyms":[{"name":"Cole-Hughes syndrome","type":"related"},{"name":"benign familial macrocephaly","type":"related"},{"name":"benign familial megalencephaly","type":"related"},{"name":"macrocephaly, benign familial","type":"exact"}],"termid":"MONDO:0007923","xrefs":{"Monarch":{"xref_id":"0007923"}}}


id: GO:0005159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin-like growth factor receptor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"insulin-like growth factor receptor binding","secondary_identifiers":["GO:0005067"],"synonyms":[{"name":"IGF receptor binding","type":"exact"},{"name":"insulin-like growth factor","type":"narrow"},{"name":"insulin-like growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005159"}


id: PBO:0088329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Pyp3","termid":"PBO:0088329"}


id: MONDO:0012885
data:
  {"annotated_genes":["SJAG_04954"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87422],"is_not":false,"summary":null,"term":"MONDO:0012885"}]},"cv_name":"mondo","definition":"A rare, non X-linked congenital disorder of gyclosylation due to steroid 5 alpha reductase type 3 deficiency characterized by a highly variable phenotype typically presenting with severe visual impairment, variable ocular anomalies (such as optic nerve hypoplasia/atrophy, iris and optic nerve coloboma, congenital cataract, glaucoma), intellectual disability, cerebellar abnormalities, nystagmus, hypotonia, ataxia, and/or ichthyosiform skin lesions. Other reported manifestations include retinitis pigmentosa, kyphosis, congenital heart defects, hypertrichosis and abnormal coagulation.","definition_xrefs":["Orphanet:324737"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete developmental defect of the eye (obsolete MONDO:0020145)","termid":"MONDO:0020145"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"SRD5A3-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080568","MEDGEN:1392124","SCTID:733601006","GARD:12397","OMIM:612379","UMLS:C4317224"],"synonyms":[{"name":"CDG Iq","type":"related"},{"name":"CDG syndrome type Iq","type":"exact"},{"name":"CDG-Iq","type":"exact"},{"name":"CDG1Q","type":"exact"},{"name":"CDGIq","type":"related"},{"name":"SRD5A3-CDG","type":"exact"},{"name":"SRD5A3-CDG (CDG-Iq)","type":"related"},{"name":"SRD5A3-congenital disorder of glycosylation","type":"exact"},{"name":"coloboma, ocular, with ichthyosis, brain malformations, and endocrine abnormalities","type":"related"},{"name":"congenital disorder of glycosylation due to steroid 5alpha-reductase type 3 deficiency","type":"related"},{"name":"congenital disorder of glycosylation type 1q","type":"exact"},{"name":"congenital disorder of glycosylation type Iq","type":"exact"},{"name":"congenital disorder of glycosylation, type Iq","type":"related"}],"termid":"MONDO:0012885","terms_by_termid":{"MONDO:0012885":null},"xrefs":{"Monarch":{"xref_id":"0012885"}}}


id: FYPO:0000857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of euchromatin is normal (i.e. indistinguishable from wild type). Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal nucleosome positioning in euchromatin","synonyms":[{"name":"normal nucleosome occupancy in euchromatin","type":"related"},{"name":"normal nucleosome positioning in euchromatin during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning in euchromatin during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing in euchromatin","type":"exact"}],"termid":"FYPO:0000857"}


id: GO:0016638
data:
  {"annotated_genes":["SJAG_02496","SJAG_03861","SJAG_01881","SJAG_00707","SJAG_03266","SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[73393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"},{"annotations":[72584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"},{"annotations":[74553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004375"},{"annotations":[115054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[59827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016639"},{"annotations":[76108,112135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.4.-.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null,"SJAG_03266":null,"SJAG_03861":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016638","terms_by_termid":{"GO:0003884":null,"GO:0004354":null,"GO:0004375":null,"GO:0004733":null,"GO:0016040":null,"GO:0016639":null,"GO:0043799":null}}


id: PBO:0056188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A2","termid":"PBO:0056188"}


id: GO:0140275
data:
  {"annotated_genes":["SJAG_04237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118084],"is_not":false,"summary":null,"term":"GO:0140275"}]},"cv_name":"cellular_component","definition":"A mitochondrial intermembrane space bridging complex consisting of components of the MICOS complex in the inner mitochondrial membrane, the SAM complex in the outer membrane, a conserved DNAJ protein (human DNAJC11) and Metaxin 1.","definition_xrefs":["PMID:26477565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"MIB complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial intermembrane space bridging complex","type":"exact"},{"name":"mitofilin complex","type":"exact"}],"termid":"GO:0140275","terms_by_termid":{"GO:0140275":null}}


id: PBO:0075943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 2","termid":"PBO:0075943"}


id: MONDO:1011095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospadias that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias, non-human animal","termid":"MONDO:1010269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias, sheep","secondary_identifiers":["OMIA:001187-9940"],"termid":"MONDO:1011095","xrefs":{"Monarch":{"xref_id":"1011095"}}}


id: FYECO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing raffinose as the carbon source, yeast extract and other components. The concentration of raffinose is typically around 2%.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raffinose YE","synonyms":[{"name":"raffinose rich medium","type":"broad"}],"termid":"FYECO:0000136"}


id: PBO:0040346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 3","termid":"PBO:0040346"}


id: PBO:0040206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrotactin 2","termid":"PBO:0040206"}


id: PBO:0070550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 16","termid":"PBO:0070550"}


id: PBO:0027206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell","termid":"PBO:0027206"}


id: PBO:0085344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipase; preferentially hydrolyses phosphatidylserine, with minor activity against cardiolipin and phosphatidylethanolamine; required for lysis of autophagic and CVT bodies; targeted to intravacuolar vesicles during autophagy via the multivesicular body (MVB) pathway; required for the maintenance of lipid droplet quantity after the diauxic shift; regulates lipolysis; expression regulated by Yap1p during autophagy","termid":"PBO:0085344"}


id: GO:1903434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:22899725","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of constitutive secretory pathway","termid":"GO:1903433"},{"relation_name":"negatively_regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of constitutive secretory pathway","synonyms":[{"name":"down regulation of constitutive secretory pathway","type":"exact"},{"name":"down-regulation of constitutive secretory pathway","type":"exact"},{"name":"downregulation of constitutive secretory pathway","type":"exact"},{"name":"inhibition of constitutive secretory pathway","type":"narrow"}],"termid":"GO:1903434"}


id: PR:Q09882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNW domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12096:SF0","OMA:SCHPO04706","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.11","secondary_identifiers":["UniProtKB:Q09882"],"synonyms":[{"name":"Spom972h-SNW1","type":"exact"},{"name":"complexed with cdc5 protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcriptional coregulator snw1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09882"}


id: PR:Q9P7T9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7T9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C977.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.17","synonyms":[{"name":"Spom972h-SPAC977.17","type":"exact"}],"termid":"PR:Q9P7T9"}


id: PBO:0029790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_N-linked_glycosylation","termid":"PBO:0029790"}


id: PATO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a cytoplasm that contains fluid filled cavities.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolated","termid":"PATO:0000941"}


id: GO:0042726
data:
  {"annotated_genes":["SJAG_00376","SJAG_02491","SJAG_00491","SJAG_04845","SJAG_04711","SJAG_01054","SJAG_00480","SJAG_01937","SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[73045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[114416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046444"},{"annotations":[66119,117470,79066,60240,76790,78293,71620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"},{"annotations":[73044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006771"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a flavin, any derivative of the dimethylisoalloxazine (7,8-dimethylbenzo[g]pteridine-2,4(3H,10H)-dione) skeleton, with a substituent on the 10 position.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_01937":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavin-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"flavin-containing compound metabolism","type":"exact"},{"name":"riboflavin and derivative metabolic process","type":"related"},{"name":"riboflavin and derivative metabolism","type":"related"},{"name":"vitamin B2 and derivative metabolic process","type":"related"},{"name":"vitamin B2 and derivative metabolism","type":"related"}],"termid":"GO:0042726","terms_by_termid":{"GO:0006747":null,"GO:0006771":null,"GO:0009231":null,"GO:0009398":null,"GO:0046444":null}}


id: PBO:0036399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfhydryl oxidase Erv2 (predicted)","termid":"PBO:0036399"}


id: PR:P36581
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calnexin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11073:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.11c","secondary_identifiers":["UniProtKB:P36581"],"synonyms":[{"name":"SPAC3C7.11c","type":"related"},{"name":"Spom972h-CANX","type":"exact"},{"name":"cnx1","type":"related"}],"termid":"PR:P36581"}


id: GO:0050408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [pyruvate kinase] phosphate + H2O = [pyruvate kinase] + phosphate.","definition_xrefs":["MetaCyc:PYRUVATE-KINASE-PHOSPHATASE-RXN","EC:3.1.3.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0004721","GO:0016787","GO:0003824","GO:0003674","GO:0016788","GO:0140096"],"is_obsolete":false,"name":"[pyruvate kinase]-phosphatase activity","synonyms":[{"name":"ATP:pyruvate 2-O-phosphotransferase-phosphate phosphohydrolase activity","type":"related"},{"name":"pyruvate kinase phosphatase activity","type":"related"},{"name":"pyruvate kinase-phosphatase activity","type":"related"}],"termid":"GO:0050408"}


id: GO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of central tolerance induction","termid":"GO:0002647"},{"relation_name":"is_a","term_name":"negative regulation of B cell tolerance induction","termid":"GO:0002662"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"negatively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell tolerance induction","synonyms":[{"name":"down regulation of central B cell tolerance induction","type":"exact"},{"name":"down-regulation of central B cell tolerance induction","type":"exact"},{"name":"downregulation of central B cell tolerance induction","type":"exact"},{"name":"inhibition of central B cell tolerance induction","type":"narrow"}],"termid":"GO:0002896"}


id: PBO:0030077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histidine_import","termid":"PBO:0030077"}


id: PATO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000928 absolute photosensitivity (obsolete PATO:0000928)","termid":"PATO:0000928"}


id: PBO:0085411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane riboflavin transporter; facilitates the uptake of vitamin B2; required for FAD-dependent processes; sequence similarity to mammalian monocarboxylate permeases, however mutants are not deficient in monocarboxylate transport","termid":"PBO:0085411"}


id: GO:1904647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:18538940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rotenone","termid":"GO:1904647"}


id: PATO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of whether the bearer's disposition to perceive differences between two or more stimuli.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discrimination","termid":"PATO:0000189"}


id: MONDO:0100460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing nicotine dependence.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tobacco addiction, susceptibility to","secondary_identifiers":["UMLS:C1861063","OMIM:188890","MEDGEN:348778"],"synonyms":[{"name":"cigarette habituation, susceptibility to","type":"exact"},{"name":"nicotine addiction, protection from","type":"exact"},{"name":"nicotine addiction, susceptibility to","type":"exact"},{"name":"nicotine dependence, protection against","type":"exact"},{"name":"nicotine dependence, susceptibility to","type":"exact"},{"name":"smoking habit, susceptibility to","type":"exact"},{"name":"susceptibility to tobacco addiction","type":"exact"},{"name":"tobacco addiction, susceptibility to","type":"exact"}],"termid":"MONDO:0100460","xrefs":{"Monarch":{"xref_id":"0100460"}}}


id: GO:0016631
data:
  {"annotated_genes":["SJAG_04107","SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[95346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + NAD(P)+ = trans-2,3-dehydroacyl-[acyl-carrier protein] + NAD(P)H + H+.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02007":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase activity (NAD(P)H)","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Enoyl-acyl_carrier_protein_reductase"],"synonyms":[{"name":"enoyl-ACP reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier protein] reductase activity","type":"exact"},{"name":"enoyl-[acyl-carrier-protein] reductase activity","type":"broad"},{"name":"enoyl-acyl carrier protein reductase","type":"exact"}],"termid":"GO:0016631","terms_by_termid":{"GO:0004318":null,"GO:0141148":null}}


id: GO:0046235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of gallate, the anion of gallic acid (3,4,5-trihydroxybenzoic acid).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete gallate biosynthetic process (obsolete GO:0046235)","synonyms":[{"name":"gallate anabolism","type":"exact"},{"name":"gallate biosynthesis","type":"exact"},{"name":"gallate formation","type":"exact"},{"name":"gallate synthesis","type":"exact"},{"name":"gallic acid biosynthesis","type":"exact"},{"name":"gallic acid biosynthetic process","type":"exact"}],"termid":"GO:0046235"}


id: PBO:0081620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 549","termid":"PBO:0081620"}


id: MONDO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2p13.2 microdeletion syndrome is a rare partial autosomal monosomy characterized by global development delay, intellectual disability, behavioral abnormalities (hyperactivity, attention deficit and autistic behaviors), brachycephaly and variable facial dysmorphism. Other associated features may include vertebral fusions, mild contractures of knees and elbows, and feeding difficulties during infancy.","definition_xrefs":["Orphanet:363680"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2p13.2 microdeletion syndrome","secondary_identifiers":["GARD:21557","MEDGEN:1662313","UMLS:C4749460"],"synonyms":[{"name":"Del(2)(p13.2)","type":"exact"}],"termid":"MONDO:0018207","xrefs":{"Monarch":{"xref_id":"0018207"}}}


id: GO:1901939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (-)-exo-alpha-bergamotene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"(-)-exo-alpha-bergamotene metabolic process","termid":"GO:1901938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene catabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene breakdown","type":"exact"},{"name":"(-)-exo-alpha-bergamotene catabolism","type":"exact"},{"name":"(-)-exo-alpha-bergamotene degradation","type":"exact"}],"termid":"GO:1901939"}


id: MONDO:0007313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cheilitis glandularis (CG) is an uncommon chronic inflammatory disease of unknown origin characterized by macrocheilia and secretions of thick saliva from swollen labial minor salivary glands.","definition_xrefs":["Orphanet:1221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cheilitis glandularis","secondary_identifiers":["GARD:412","OMIM:118330","SCTID:26374003","MESH:C535921","MEDGEN:75626","UMLS:C0267034"],"synonyms":[{"name":"cheilitis glandularis","type":"exact"}],"termid":"MONDO:0007313","xrefs":{"Monarch":{"xref_id":"0007313"}}}


id: PBO:0052293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 1 pseudogene 1","termid":"PBO:0052293"}


id: GO:0030775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + glucuronoxylan D-glucuronate = S-adenosyl-L-homocysteine + glucuronoxylan 4-O-methyl-D-glucuronate.","definition_xrefs":["EC:2.1.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"glucuronoxylan 4-O-methyltransferase activity","secondary_identifiers":["MetaCyc:GLUCURONOXYLAN-4-O-METHYLTRANSFERASE-RXN","RHEA:20413"],"synonyms":[{"name":"S-adenosyl-L-methionine:glucuronoxylan-D-glucuronate 4-O-methyltransferase activity","type":"related"}],"termid":"GO:0030775"}


id: GO:1903889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plant epidermal cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:123345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of plant epidermal cell differentiation","termid":"GO:1903888"},{"relation_name":"negatively_regulates","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plant epidermal cell differentiation","synonyms":[{"name":"down regulation of plant epidermal cell differentiation","type":"exact"},{"name":"down-regulation of plant epidermal cell differentiation","type":"exact"},{"name":"downregulation of plant epidermal cell differentiation","type":"exact"},{"name":"inhibition of plant epidermal cell differentiation","type":"narrow"}],"termid":"GO:1903889"}


id: PBO:0072811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 7","termid":"PBO:0072811"}


id: FYPO:0003289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to medial cortical node","synonyms":[{"name":"abnormal protein localisation to medial cortical node","type":"exact"},{"name":"abnormal protein localization to cortical medial dot","type":"exact"},{"name":"abnormal protein localization to cytokinetic nodes","type":"related"},{"name":"abnormal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"abnormal protein localization to medial cortical nodes","type":"exact"},{"name":"abnormal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0003289"}


id: PBO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Snt1","termid":"PBO:0002821"}


id: PR:P39750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flap endonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02239","PRO:DNx","PANTHER:PTHR11081:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flap endonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.06c","secondary_identifiers":["UniProtKB:P39750"],"synonyms":[{"name":"DNA repair protein rad2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FEN-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FEN1","type":"exact"},{"name":"flap structure-specific endonuclease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P39750"}


id: PBO:0004892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Rsm25 (predicted)","termid":"PBO:0004892"}


id: GO:0075018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of appressorium formation","termid":"GO:0075017"},{"relation_name":"positively_regulates","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appressorium formation","synonyms":[{"name":"positive regulation of appressorium formation on or near host","type":"related"}],"termid":"GO:0075018"}


id: PBO:0082658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the CCR4-NOT core complex, involved in mRNA decapping; this complex has multiple roles in regulating mRNA levels including regulation of transcription and destabilizing mRNAs through deadenylation; basal transcription factor","termid":"PBO:0082658"}


id: MONDO:0003911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mixed cell uveal melanoma that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed cell uveal melanoma","termid":"MONDO:0003910"},{"relation_name":"is_a","term_name":"malignant ciliary body melanoma","termid":"MONDO:0003912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"ciliary body mixed cell melanoma","secondary_identifiers":["UMLS:C1333051","MEDGEN:234150","NCIT:C35783","DOID:6523"],"synonyms":[{"name":"ciliary body mixed cell melanoma","type":"exact"},{"name":"ciliary body mixed cell uveal melanoma","type":"exact"},{"name":"mixed cell uveal melanoma of ciliary body","type":"exact"}],"termid":"MONDO:0003911","xrefs":{"Monarch":{"xref_id":"0003911"}}}


id: PBO:0001287
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Graves' disease","termid":"PBO:0001287"}


id: PBO:0004872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fkh2","termid":"PBO:0004872"}


id: MONDO:0010486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Olmsted syndrome","termid":"MONDO:0031421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome, X-linked","secondary_identifiers":["UMLS:C3806745","GARD:15273","DOID:0112012","MEDGEN:813075","OMIM:300918"],"synonyms":[{"name":"Olmsted syndrome, X-linked","type":"exact"},{"name":"Olmsted syndrome, X-linked, X-linked recessive","type":"exact"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques, X-linked","type":"exact"}],"termid":"MONDO:0010486","xrefs":{"Monarch":{"xref_id":"0010486"}}}


id: PBO:0049405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2A","termid":"PBO:0049405"}


id: GO:1902590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An organelle organization which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism organelle organization (obsolete GO:1902590)","synonyms":[{"name":"multi organism organelle organization","type":"exact"}],"termid":"GO:1902590"}


id: MONDO:0017294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infantile glycerol kinase deficiency (GKD) is a severe form of GKD characterized clinically by poor feeding, failure to thrive, salt-wasting dehydration, vomiting, Addisonian pigmentation, hypotonia, and disorders of consciousness. Some patients have complex GKD associated with adrenal hypoplasia congenita and/or Duchenne muscular dystrophy (DMD) with manifestations including intellectual deficit, dysmorphic facial features, abnormal external genitalia, strabismus, seizures, and progressive lethargy.","definition_xrefs":["Orphanet:284408"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"isolated glycerol kinase deficiency","termid":"MONDO:0018459"},{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"},{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycerol kinase deficiency, infantile form","termid":"MONDO:0017294","xrefs":{"Monarch":{"xref_id":"0017294"}}}


id: PBO:0043106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity factor 8","termid":"PBO:0043106"}


id: GO:0002723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"is_a","term_name":"regulation of B cell cytokine production","termid":"GO:0002721"},{"relation_name":"positively_regulates","term_name":"B cell cytokine production","termid":"GO:0002368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell cytokine production","synonyms":[{"name":"activation of B cell cytokine production","type":"narrow"},{"name":"positive regulation of B lymphocyte cytokine production","type":"exact"},{"name":"positive regulation of B-cell cytokine production","type":"exact"},{"name":"positive regulation of B-lymphocyte cytokine production","type":"exact"},{"name":"stimulation of B cell cytokine production","type":"narrow"},{"name":"up regulation of B cell cytokine production","type":"exact"},{"name":"up-regulation of B cell cytokine production","type":"exact"},{"name":"upregulation of B cell cytokine production","type":"exact"}],"termid":"GO:0002723"}


id: GO:0004160
data:
  {"annotated_genes":["SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71561],"is_not":false,"summary":null,"term":"GO:0004160"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H2O.","definition_xrefs":["RHEA:24809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"dihydroxy-acid dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIHYDROXYISOVALDEHYDRAT-RXN","EC:4.2.1.9"],"synonyms":[{"name":"2,3-dihydroxy-acid hydro-lyase (3-methyl-2-oxobutanoate-forming)","type":"related"},{"name":"2,3-dihydroxy-acid hydro-lyase activity","type":"related"},{"name":"2,3-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"DHAD","type":"related"},{"name":"acetohydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"dihydroxy acid dehydrase activity","type":"related"}],"termid":"GO:0004160","terms_by_termid":{"GO:0004160":null}}


id: PBO:0044511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton regulator RNA","termid":"PBO:0044511"}


id: GO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high density lipoprotein particle stimulus","secondary_identifiers":["GO:0055099"],"synonyms":[{"name":"cellular response to high-density lipoprotein particle stimulus","type":"exact"},{"name":"response to high density lipoprotein particle","type":"broad"},{"name":"response to high density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071403"}


id: MONDO:0005521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete shigellosis (obsolete MONDO:0005521)","termid":"MONDO:0005521","xrefs":{"Monarch":{"xref_id":"0005521"}}}


id: PBO:0061842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-linked N-acetylglucosamine (GlcNAc) transferase","termid":"PBO:0061842"}


id: PBO:0082732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; involved in transcriptional regulation of PHO5; affects termination of snoRNAs and cryptic unstable transcripts (CUTs); C-terminus shares significant sequence identity with the human candidate tumor suppressor p33-ING1 and its isoform ING3","termid":"PBO:0082732"}


id: RO:0002469
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides_nutrients_for","termid":"RO:0002469"}


id: GO:0090654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubulo-vesicular structure located in the basolateral cytoplasm that participates in basolateral cargo recycling in polarized epithelial cells.","definition_xrefs":["PMID:16394106","PMID:17494872","PMID:9405315","PMID:11389442","PMID:21170358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"part_of","term_name":"basolateral cytoplasm","termid":"GO:0090652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410","GO:0005768"],"is_obsolete":false,"name":"basolateral recycling endosome","termid":"GO:0090654"}


id: PBO:0084484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis specific DNA helicase; involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control; catalyzes the unwinding of Holliday junctions; has ssDNA and dsDNA stimulated ATPase activity","termid":"PBO:0084484"}


id: GO:0019828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of aspartic-type endopeptidases.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase inhibitor activity","termid":"GO:0004866"},{"relation_name":"negatively_regulates","term_name":"aspartic-type endopeptidase activity","termid":"GO:0004190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"negatively_regulates","termid":"GO:0008233"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0140096"},{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0140678","GO:0004857","GO:0016787","GO:0030234","GO:0098772","GO:0003824","GO:0003674","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"aspartic-type endopeptidase inhibitor activity","synonyms":[{"name":"aspartic protease inhibitor activity","type":"narrow"}],"termid":"GO:0019828"}


id: GO:0032374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of cholesterol transport","termid":"GO:0032374"}


id: GO:2000108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"positively_regulates","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte apoptotic process","synonyms":[{"name":"positive regulation of leukocyte apoptosis","type":"narrow"}],"termid":"GO:2000108"}


id: PBO:0043999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-terminal Src kinase","termid":"PBO:0043999"}


id: PBO:0004083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Slu7","termid":"PBO:0004083"}


id: GO:0034529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-3-carboxybenzalpyruvate + H2O = 3-formylsalicylic acid + pyruvate.","definition_xrefs":["PMID:7710320"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-3-carboxy-benzalpyruvate hydratase-aldolase activity (obsolete GO:0034529)","termid":"GO:0034529"}


id: PBO:0058770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6894","termid":"PBO:0058770"}


id: GO:0038137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals transmitted by a heterodimeric complex of the tyrosine kinase receptors EGFR (epidermal growth factor receptor/ERBB1) and ERBB4. The pathway begins with binding of a ligand to either cell surface receptor, or the dimeric receptor complex, and ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB4-EGFR signaling pathway","synonyms":[{"name":"ERBB1-ERBB4 signaling pathway","type":"exact"},{"name":"ERBB4-EGFR signalling pathway","type":"exact"},{"name":"HER1-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038137"}


id: SO:0001299
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_methyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_methyladenosine","secondary_identifiers":["RNAMOD:005"],"synonyms":[{"name":"2-methylthio-N6-methyladenosine","type":"exact"},{"name":"ms2m6A","type":"exact"},{"name":"two methylthio N6 methyladenosine","type":"exact"}],"termid":"SO:0001299"}


id: PBO:0068533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 134, pseudogene","termid":"PBO:0068533"}


id: PBO:0057672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1263","termid":"PBO:0057672"}


id: PBO:0025496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-N ortholog Mis15","termid":"PBO:0025496"}


id: PBO:0049049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 42","termid":"PBO:0049049"}


id: PR:O74759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mst2 complex subunit nto1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.04c","synonyms":[{"name":"Spom972h-nto1","type":"exact"}],"termid":"PR:O74759"}


id: MONDO:1040047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS5 gene.","definition_xrefs":["PMID:33560420","PMID:15137946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS5-related ciliopathy","synonyms":[{"name":"BBS5-related ciliopathy","type":"exact"}],"termid":"MONDO:1040047","xrefs":{"Monarch":{"xref_id":"1040047"}}}


id: GO:0102182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol + NAD = avenastenone + NADH + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102182)","termid":"GO:0102182"}


id: GO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the P-TEFb-cap methyltransferase complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"P-TEFb-cap methyltransferase complex localization","synonyms":[{"name":"P-TEFb-cap methyltransferase complex localisation","type":"exact"},{"name":"establishment and maintenance of P-TEFb-cap methyltransferase complex localization","type":"exact"}],"termid":"GO:0070817"}


id: GO:2000587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010642"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:2000586"},{"relation_name":"negatively_regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"negative regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"negative regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"negative regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000587"}


id: PBO:0070676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 47","termid":"PBO:0070676"}


id: PBO:0091416
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ELO3","termid":"PBO:0091416"}


id: PBO:0053442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 388","termid":"PBO:0053442"}


id: MONDO:0014145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the GDF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 17","secondary_identifiers":["UMLS:C3715164","DOID:0110217","OMIM:615360","ICD10CM:H35.5","GARD:15950","MEDGEN:811616"],"synonyms":[{"name":"GDF6 Leber congenital amaurosis","type":"exact"},{"name":"LCA17","type":"exact"},{"name":"Leber congenital amaurosis 17","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in GDF6","type":"exact"},{"name":"Leber congenital amaurosis type 17","type":"exact"}],"termid":"MONDO:0014145","xrefs":{"Monarch":{"xref_id":"0014145"}}}


id: GO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in), which contributes to regulating the membrane potential of a cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium:sodium antiporter activity","termid":"GO:0005432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential","termid":"GO:0086038"}


id: PBO:0051936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL2 inducible T cell kinase","termid":"PBO:0051936"}


id: PATO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar chromatic property that is the degree of purity of perceived light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatic property","termid":"PATO:0001301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color saturation","termid":"PATO:0000017"}


id: GO:0140904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a cytoophidium. Cytoophidia are mesoscale, intracellular, filamentous structures that contain metabolic enzymes.","definition_xrefs":["PMID:27362644","PMID:25223282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoophidium organization","termid":"GO:0140904"}


id: FYPO:0003643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of urease activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal urease activity","termid":"FYPO:0003642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased urease activity","synonyms":[{"name":"reduced urease activity","type":"exact"}],"termid":"FYPO:0003643"}


id: MONDO:0010605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemopoietic proliferation","secondary_identifiers":["MEDGEN:336101","OMIM:306930","UMLS:C1844026"],"synonyms":[{"name":"hemopoietic proliferation","type":"exact"}],"termid":"MONDO:0010605","xrefs":{"Monarch":{"xref_id":"0010605"}}}


id: PBO:0078015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 5","termid":"PBO:0078015"}


id: GO:0061452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the retrotrapezoid nucleus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"retrotrapezoid nucleus development","termid":"GO:0061451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotrapezoid nucleus neuron differentiation","termid":"GO:0061452"}


id: GO:0141010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism mediated by RNA-directed DNA methylation. RNA-directed DNA methylation is a gene silencing process in which small interfering RNAs (siRNAs) guide DNA methylation to the siRNA-generating genomic loci and other loci that are homologous to the siRNAs for de novo DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:28633017","PMID:32381626","PMID:32719317","PMID:36570931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene silencing by siRNA-directed DNA methylation","termid":"GO:0080188"},{"relation_name":"is_a","term_name":"transposable element silencing by heterochromatin formation","termid":"GO:0141005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transposable element silencing by siRNA-mediated DNA methylation","synonyms":[{"name":"retrostransposon silencing by RdDM","type":"exact"},{"name":"retrotransposon silencing by RNA-directed DNA methylation","type":"related"},{"name":"retrotransposon silencing by siRNA-directed DNA methylation","type":"narrow"},{"name":"transposable element silencing by siRNA-directed DNA methylation","type":"exact"}],"termid":"GO:0141010"}


id: PBO:0081610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 534","termid":"PBO:0081610"}


id: PBO:0068616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 68, pseudogene","termid":"PBO:0068616"}


id: GO:0051509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-glucose + tomatidine = UDP + O-glucosyl-tomatidine.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete tomatidine UDP-glucosyltransferase activity (obsolete GO:0051509)","termid":"GO:0051509"}


id: MONDO:0006409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poorly cohesive gastric adenocarcinoma characterized by malignant cells containing intracytoplasmic mucin.","definition_xrefs":["NCIT:C5250"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diffuse gastric adenocarcinoma","termid":"MONDO:0005017"},{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"signet ring cell gastric adenocarcinoma","secondary_identifiers":["MEDGEN:234782","DOID:8025","EFO:1000524","ONCOTREE:SSRCC","UMLS:C1335965"],"synonyms":[{"name":"gastric signet Ring cell adenocarcinoma","type":"exact"},{"name":"gastric signet ring cell adenocarcinoma","type":"exact"},{"name":"signet Ring cell adenocarcinoma of stomach","type":"exact"},{"name":"signet Ring cell adenocarcinoma of the stomach","type":"exact"},{"name":"signet Ring cell stomach adenocarcinoma","type":"exact"},{"name":"signet ring cell carcinoma of the stomach","type":"related"},{"name":"signet ring cell gastric adenocarcinoma","type":"exact"}],"termid":"MONDO:0006409","xrefs":{"Monarch":{"xref_id":"0006409"}}}


id: PBO:0085577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 2'-O-methylation of C32 of substrate tRNAs; interacts with 2'-O-ribose methyltransferase Trm7p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; non-essential gene; yeast null mutant can be functionally complemented by human THADA, mutations in which have been implicated in epithelial thyroid adenomas, type 2 diabetes, and polycystic ovary syndrome (PCOS)","termid":"PBO:0085577"}


id: MONDO:0014732
data:
  {"annotated_genes":["SJAG_04966","SJAG_01772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86295,86296],"is_not":false,"summary":null,"term":"MONDO:0014732"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the VPS11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01772":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:466934","UMLS:C4225247","GARD:17837","DOID:0060796","MEDGEN:905068","OMIM:616683"],"synonyms":[{"name":"HLD12","type":"exact"},{"name":"VPS11 leukodystrophy","type":"exact"},{"name":"VPS11-related autosomal recessive hypomyelinating leukodystrophy","type":"related"},{"name":"VPS11-related autosomal recessive hypomyelinating leukoencephalopathy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 12","type":"exact"},{"name":"leukodystrophy caused by mutation in VPS11","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 12","type":"exact"},{"name":"leukodystrophy, hypomyelinating, type 12","type":"exact"}],"termid":"MONDO:0014732","terms_by_termid":{"MONDO:0014732":null},"xrefs":{"Monarch":{"xref_id":"0014732"}}}


id: PBO:0054831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2244","termid":"PBO:0054831"}


id: GO:0050020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinonate = 2-dehydro-3-deoxy-L-arabinonate + H2O.","definition_xrefs":["EC:4.2.1.25","RHEA:20968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-arabinonate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02522","MetaCyc:L-ARABINONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"L-arabinonate hydro-lyase (2-dehydro-3-deoxy-L-arabinonate-forming)","type":"related"},{"name":"L-arabinonate hydro-lyase activity","type":"related"},{"name":"L-arabonate dehydrase activity","type":"related"},{"name":"L-arabonate dehydratase activity","type":"related"}],"termid":"GO:0050020"}


id: PBO:0041800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 9","termid":"PBO:0041800"}


id: GO:1900906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of hexadecanal metabolic process","termid":"GO:1900905"},{"relation_name":"negatively_regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexadecanal metabolic process","synonyms":[{"name":"down regulation of hexadecanal metabolic process","type":"exact"},{"name":"down regulation of hexadecanal metabolism","type":"related"},{"name":"down-regulation of hexadecanal metabolic process","type":"exact"},{"name":"down-regulation of hexadecanal metabolism","type":"related"},{"name":"downregulation of hexadecanal metabolic process","type":"exact"},{"name":"downregulation of hexadecanal metabolism","type":"related"},{"name":"inhibition of hexadecanal metabolic process","type":"narrow"},{"name":"inhibition of hexadecanal metabolism","type":"related"},{"name":"negative regulation of hexadecanal metabolism","type":"related"}],"termid":"GO:1900906"}


id: PBO:0028521
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation","termid":"PBO:0028521"}


id: FYECO:0000005
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_01680:allele-2":{"allele_type":"amino_acid_mutation","description":"P470L","gene_uniquename":"SJAG_01680","name":"chk1-P470L","synonyms":[{"name":"chk1- hyperactive (chk1-hyp)","reference":"PMID:23090706","type":"exact"},{"name":"chk1-hyperactive (chk1-hyp)","reference":"PMID:20368354","type":"exact"}],"uniquename":"SJAG_01680:allele-2"},"SJAG_01753:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01753","name":"mdh1delta","uniquename":"SJAG_01753:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_03920:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03920","name":"sdh3delta","uniquename":"SJAG_03920:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04287:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04287","name":"cds1delta","uniquename":"SJAG_04287:allele-1"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"},"SJAG_04843:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04843","name":"fum1delta","uniquename":"SJAG_04843:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"},"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119710,119463,119395,119533,119871,119872,119408,119397,119398,119399,119520,119521,119522,119526,119527,119528,119873,119874,119807,119571,119582,119696,119697,119698,119560,119562,119793,119809,119789,119792,119579,119404,119445,119709,119711,119517,119518,119519,119523,119524,119525,119795,119796,119548,119800,119801,119531,119532,119406,119423,119529,119530,119695,119794,119880,119694,119804,119464,119707,119577,119790,119797,119407,119802,119738,119559,119561,119549,119405,119516,119705,119706,119701,119704,119739,119550,119551,119552,119553,119554,119712,119713,119714,119572,119573,119580,119583,119584,119539,119540,119541,119542,119543,119544,119545,119555,119556,119581,119805,119806,119808,119546,119798,119799,119803,119567,119568,119578],"is_not":false,"summary":null,"term":"FYECO:0000005"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"The experiment was performed, or cells were grown in a temperature typically in the range between 25+32 degrees Celsius.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00118":null,"SJAG_00364":null,"SJAG_00409":null,"SJAG_00429":null,"SJAG_00514":null,"SJAG_00601":null,"SJAG_01143":null,"SJAG_01205":null,"SJAG_01355":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01665":null,"SJAG_01680":null,"SJAG_01753":null,"SJAG_01794":null,"SJAG_02266":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02527":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_02796":null,"SJAG_02860":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03689":null,"SJAG_03703":null,"SJAG_03720":null,"SJAG_03916":null,"SJAG_03920":null,"SJAG_04061":null,"SJAG_04280":null,"SJAG_04284":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04574":null,"SJAG_04671":null,"SJAG_04697":null,"SJAG_04843":null,"SJAG_04883":null,"SJAG_05242":null},"genotype_count":56,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"cds1delta":{"display_name":"cds1delta","display_uniquename":"cds1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04287:allele-1","expression":"Null"}]}]},"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"chk1-P470L(aa)","display_uniquename":"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-2","expression":"Not assayed or wild type"}]}]},"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type__rad24delta":{"display_name":"chk1-P470L(aa) rad24delta","display_uniquename":"chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type__rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-2","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta frameshift(aa61->stop)","display_uniquename":"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-2","expression":"Not assayed or wild type"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta mpe1-R77W(aa)","display_uniquename":"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02668:allele-1","expression":"Not assayed or wild type"}]}]},"fum1delta":{"display_name":"fum1delta","display_uniquename":"fum1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04843:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mdh1delta":{"display_name":"mdh1delta","display_uniquename":"mdh1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01753:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__rga6delta":{"display_name":"rga4delta rga6delta","display_uniquename":"rga4delta__rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-G788E(aa)","display_uniquename":"rga4delta__wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rga6delta":{"display_name":"rga6delta","display_uniquename":"rga6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]}]},"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga6delta wee1-as8(T582G aa)","display_uniquename":"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"sdh3delta":{"display_name":"sdh3delta","display_uniquename":"sdh3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03920:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]},"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_03118","SJAG_02266","SJAG_02668","SJAG_04574","SJAG_03596","SJAG_02621","SJAG_04280","SJAG_03689","SJAG_00118","SJAG_01143","SJAG_04522","SJAG_00028","SJAG_01205","SJAG_01680"],"name":"standard temperature","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null,"PMID:23873862":null,"PMID:24184107":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:36695178":null,"PMID:37164017":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04287","SJAG_04697","SJAG_00409","SJAG_02621","SJAG_00028","SJAG_04671","SJAG_03720","SJAG_01355","SJAG_04522","SJAG_02763","SJAG_04061","SJAG_04574","SJAG_03356","SJAG_00514","SJAG_04312","SJAG_03449","SJAG_04280","SJAG_02594","SJAG_03920","SJAG_01143","SJAG_02409","SJAG_04843","SJAG_00364","SJAG_01205","SJAG_04284","SJAG_03916","SJAG_04883","SJAG_03581","SJAG_01605","SJAG_03689","SJAG_05242","SJAG_02796","SJAG_01410","SJAG_00429","SJAG_01753","SJAG_02527","SJAG_01680","SJAG_02860","SJAG_00601","SJAG_00118"],"single_locus_genotype_uniquenames":["pka1delta","sdh3delta","cox6delta","rga4delta","fum1delta","mid2delta","ned1delta","rdp1delta","gpd1delta","dcr1delta","gms1delta","chk1delta","mdh1delta","rad51delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","rga6delta","mrc1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","rad26delta","stc1delta","rad3delta","wcs1delta","ptp4delta","chp1delta","clr4delta","ago1delta","arb2delta","rip1delta","crb2delta","chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","cds1delta","nup61delta","arb1delta","wcs2delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","mid1delta","rad9delta","tel1delta","scd1delta","gef1delta"],"synonyms":[{"name":"25 degrees Celsius","type":"narrow"},{"name":"26 degrees Celsius","type":"narrow"},{"name":"27 degrees Celsius","type":"narrow"},{"name":"28 degrees Celsius","type":"narrow"},{"name":"29 degrees Celsius","type":"narrow"},{"name":"30 degrees Celsius","type":"narrow"},{"name":"31 degrees Celsius","type":"narrow"},{"name":"32 degrees Celsius","type":"narrow"},{"name":"normal temperature","type":"exact"}],"termid":"FYECO:0000005","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000015":null,"FYECO:0000081":null,"FYECO:0000102":null,"FYECO:0000103":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0025499
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria","termid":"PBO:0025499"}


id: PBO:0031451
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-perforated_nuclear_envelope","termid":"PBO:0031451"}


id: PBO:0056019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM family member 14B","termid":"PBO:0056019"}


id: GO:0000466
data:
  {"annotated_genes":["SJAG_02250","SJAG_01818","SJAG_01581","SJAG_03234","SJAG_00854","SJAG_04006","SJAG_02830","SJAG_04084","SJAG_02275","SJAG_00882","SJAG_03745","SJAG_02993","SJAG_06613","SJAG_04369","SJAG_04818","SJAG_04824","SJAG_04321","SJAG_04582","SJAG_00772","SJAG_00081","SJAG_00965","SJAG_02644","SJAG_04289","SJAG_04524","SJAG_04153","SJAG_04492","SJAG_02553","SJAG_03952","SJAG_00897","SJAG_00722","SJAG_03796","SJAG_03179","SJAG_01623","SJAG_04174","SJAG_02547","SJAG_03789","SJAG_01551","SJAG_00955","SJAG_01521","SJAG_04916","SJAG_02374","SJAG_01191","SJAG_03425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61779,63304,78639,79110,98305],"is_not":false,"summary":null,"term":"GO:0000466"},{"annotations":[92035,95295,104431,71873],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000448"},{"annotations":[71580,103442,104875,72181,115696,70738,95045,97120,96829,115608,118890,73351,109316,78618,105092,113793,105980,105981,74874],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[79862,97571,106782,107765,90319,72070,115743,102398,99266,72863,116182,71237,75429,71609,78047],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000467"},{"annotations":[107766],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of an rRNA molecule originally produced as part of a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of 5.8S rRNA","termid":"GO:0000460"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00722":null,"SJAG_00772":null,"SJAG_00854":null,"SJAG_00882":null,"SJAG_00897":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_01818":null,"SJAG_02250":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02644":null,"SJAG_02830":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03425":null,"SJAG_03745":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04174":null,"SJAG_04289":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04492":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0000466","terms_by_termid":{"GO:0000447":null,"GO:0000448":null,"GO:0000465":null,"GO:0000466":null,"GO:0000467":null}}


id: GO:0046085
data:
  {"annotated_genes":["SJAG_01070","SJAG_00044","SJAG_02582","SJAG_02959","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90886],"is_not":false,"summary":null,"term":"GO:0046085"},{"annotations":[89222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[87925,87926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[117135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"adenosine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine metabolism","type":"exact"}],"termid":"GO:0046085","terms_by_termid":{"GO:0006154":null,"GO:0006169":null,"GO:0046085":null,"GO:0046086":null}}


id: PBO:0005358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Mad3","termid":"PBO:0005358"}


id: PBO:0075899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppression of tumorigenicity 7 like","termid":"PBO:0075899"}


id: GO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + methyl salicylate = H+ + methanol + salicylate.","definition_xrefs":["PMID:18467465","PMID:18643994","RHEA:33611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"methyl salicylate esterase activity","secondary_identifiers":["MetaCyc:RXNQT-4366"],"synonyms":[{"name":"MESA esterase activity","type":"exact"},{"name":"methyl SA esterase activity","type":"exact"},{"name":"methylsalicylate esterase activity","type":"exact"},{"name":"salicylic acid methyl ester esterase activity","type":"exact"}],"termid":"GO:0080031"}


id: MONDO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 14","secondary_identifiers":["GARD:20884","MEDGEN:1826036","UMLS:C5679704","Orphanet:262941"],"synonyms":[{"name":"14q duplication","type":"related"},{"name":"14q trisomy","type":"related"},{"name":"Duplication 14q","type":"related"},{"name":"chromosome 14q duplication","type":"related"},{"name":"partial duplication of chromosome 14q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 14","type":"exact"},{"name":"partial trisomy 14q","type":"related"},{"name":"partial trisomy of chromosome 14q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 14","type":"exact"},{"name":"trisomy 14q","type":"related"}],"termid":"MONDO:0016964","xrefs":{"Monarch":{"xref_id":"0016964"}}}


id: MONDO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary hemorrhagic telangiectasia in which the cause of the disease is a mutation in the ACVRL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemorrhagic telangiectasia","termid":"MONDO:0019180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"telangiectasia, hereditary hemorrhagic, type 2","secondary_identifiers":["MEDGEN:324960","GARD:9901","OMIM:600376","UMLS:C1838163"],"synonyms":[{"name":"ACVRL1 hereditary hemorrhagic telangiectasia","type":"exact"},{"name":"HHT2","type":"related"},{"name":"ORW2","type":"related"},{"name":"Osler Weber Rendu syndrome type 2","type":"related"},{"name":"hereditary hemorrhagic telangiectasia caused by mutation in ACVRL1","type":"exact"},{"name":"hereditary hemorrhagic telangiectasia type 2","type":"related"},{"name":"pulmonary arterial hypertension, hereditary hemorrhagic telangiectasia-related","type":"related"},{"name":"telangiectasia hereditary hemorrhagic type 2","type":"related"},{"name":"telangiectasia, hereditary hemorrhagic, type 2","type":"exact"}],"termid":"MONDO:0010880","xrefs":{"Monarch":{"xref_id":"0010880"}}}


id: FYPO:0000294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any RNA metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype","termid":"FYPO:0000292"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"RNA metabolism phenotype","synonyms":[{"name":"RNA metabolism phenotype during mitotic cell cycle","type":"related"},{"name":"RNA metabolism phenotype during vegetative growth","type":"exact"},{"name":"fission yeast RNA metabolism phenotype","type":"exact"}],"termid":"FYPO:0000294"}


id: PBO:0043412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap methyltransferase 1","termid":"PBO:0043412"}


id: MONDO:0975957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telangiectasia, impaired intellectual development, microcephaly, metaphyseal dysplasia, eye abnormalities, and short stature","secondary_identifiers":["OMIM:621056"],"termid":"MONDO:0975957","xrefs":{"Monarch":{"xref_id":"0975957"}}}


id: GO:1902326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chlorophyll biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23555952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of chlorophyll biosynthetic process","synonyms":[{"name":"activation of chlorophyll anabolism","type":"narrow"},{"name":"activation of chlorophyll biosynthesis","type":"narrow"},{"name":"activation of chlorophyll biosynthetic process","type":"narrow"},{"name":"activation of chlorophyll formation","type":"narrow"},{"name":"activation of chlorophyll synthesis","type":"narrow"},{"name":"positive regulation of chlorophyll anabolism","type":"exact"},{"name":"positive regulation of chlorophyll biosynthesis","type":"exact"},{"name":"positive regulation of chlorophyll formation","type":"exact"},{"name":"positive regulation of chlorophyll synthesis","type":"exact"},{"name":"up regulation of chlorophyll anabolism","type":"exact"},{"name":"up regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up regulation of chlorophyll formation","type":"exact"},{"name":"up regulation of chlorophyll synthesis","type":"exact"},{"name":"up-regulation of chlorophyll anabolism","type":"exact"},{"name":"up-regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up-regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up-regulation of chlorophyll formation","type":"exact"},{"name":"up-regulation of chlorophyll synthesis","type":"exact"},{"name":"upregulation of chlorophyll anabolism","type":"exact"},{"name":"upregulation of chlorophyll biosynthesis","type":"exact"},{"name":"upregulation of chlorophyll biosynthetic process","type":"exact"},{"name":"upregulation of chlorophyll formation","type":"exact"},{"name":"upregulation of chlorophyll synthesis","type":"exact"}],"termid":"GO:1902326"}


id: PBO:0027221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubules_present_in_increased_numbers","termid":"PBO:0027221"}


id: PBO:0066959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 261","termid":"PBO:0066959"}


id: GO:0035151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that an epithelial tube in an open tracheal system is of the correct length and diameter. Tracheal tubes undergo highly regulated tube-size increases during development, expanding up to 40 times their initial size by the end of larval life. Tube size appears to be controlled by regulation of apical membrane expansion and secretion, rather than by changes in cell number, size or shape.","definition_xrefs":["GOC:mtg_sensu","PMID:12973360","PMID:12930776","PMID:10887083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size","termid":"GO:0035150"},{"relation_name":"is_a","term_name":"regulation of tube architecture, open tracheal system","termid":"GO:0035152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube size, open tracheal system","synonyms":[{"name":"regulation of tracheal tube size","type":"exact"}],"termid":"GO:0035151"}


id: GO:1990120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of proteins and messenger RNA (mRNA) molecules to form a messenger ribonucleoprotein (mRNP) complex.","definition_xrefs":["PMID:23721653","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete messenger ribonucleoprotein complex assembly (obsolete GO:1990120)","termid":"GO:1990120"}


id: PR:O94236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12399:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.07","secondary_identifiers":["UniProtKB:O94236"],"synonyms":[{"name":"SPAC637.07","type":"related"},{"name":"Spom972h-EIF3D","type":"exact"},{"name":"eIF3d (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eif3d","type":"related"},{"name":"microtubule-destabilizing protein moe1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94236"}


id: MONDO:1010131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A debilitating condition characterized by a fibrocollagenous membrane encasing the small intestine, resulting in recurrent small bowel obstructions.","definition_xrefs":["PMID:24133081","PMID:39631118","PMID:30065556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"},{"relation_name":"is_a","term_name":"peritonitis","termid":"MONDO:1010128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"encapsulating peritoneal sclerosis","synonyms":[{"name":"EPS","type":"exact"},{"name":"abdominal cocoon syndrome","type":"exact"},{"name":"peritonitis chronica fibrosa incapsulata","type":"exact"},{"name":"sclerosing encapsulating peritonitis","type":"exact"}],"termid":"MONDO:1010131","xrefs":{"Monarch":{"xref_id":"1010131"}}}


id: MONDO:0018833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare idiopathic macular telangiectasia (obsolete MONDO:0018833)","secondary_identifiers":["Orphanet:482092"],"termid":"MONDO:0018833","xrefs":{"Monarch":{"xref_id":"0018833"}}}


id: MONDO:0005655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with nematodes of the genus ascaridia. This condition usually occurs in fowl, often manifesting diarrhea.","definition_xrefs":["MESH:D001198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ascaridiasis","secondary_identifiers":["SCTID:76160002","EFO:0007155","ICD10CM:B77","MEDGEN:2089","UMLS:C0003952","SCTID:2435008","DOID:3108"],"synonyms":[{"name":"Ascaridia caused disease or disorder","type":"exact"},{"name":"Ascaridia disease or disorder","type":"exact"},{"name":"Ascaridia infectious disease","type":"exact"},{"name":"ascaridiosis","type":"related"},{"name":"infection by Ascaridia","type":"exact"},{"name":"infection caused by Ascaridia","type":"related"}],"termid":"MONDO:0005655","xrefs":{"Monarch":{"xref_id":"0005655"}}}


id: GO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose 1-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016301","GO:0003824"],"is_obsolete":false,"name":"1-phosphofructokinase activity","secondary_identifiers":["RHEA:14213","MetaCyc:1PFRUCTPHOSN-RXN"],"synonyms":[{"name":"1-phosphofructokinase (phosphorylating)","type":"related"},{"name":"ATP:D-fructose-phosphate 6-phosphotransferase activity","type":"related"},{"name":"D-fructose-1-phosphate kinase activity","type":"related"},{"name":"fructose 1-phosphate kinase activity","type":"related"},{"name":"fructose-1-phosphate kinase activity","type":"related"},{"name":"phosphofructokinase 1","type":"related"}],"termid":"GO:0008662"}


id: PBO:0070952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 7","termid":"PBO:0070952"}


id: MONDO:0006558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pregnancy-associated autoimmune skin disease that is characterized by an itchy rash that develops into blisters. It is most common during the second and third trimesters of pregnancy. It was previously known as herpes gestationis although it has no association with the herpes virus whatsoever.","direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pemphigoid gestationis","secondary_identifiers":["DOID:14482","MESH:D006559","Wikipedia:Gestational_pemphigoid","ICD9:646.80","EFO:1000709","icd11.foundation:1405755890","UMLS:C0019343","Orphanet:63275","GARD:6497","MEDGEN:9233","NCIT:C85003","SCTID:86081009","MedDRA:10019939","DOID:0040098"],"synonyms":[{"name":"Herpes gestationis","type":"exact"},{"name":"Herpes gestationis (disorder)","type":"exact"},{"name":"Herpes gestationis NOS (disorder)","type":"exact"},{"name":"Herpes gestationis unspecified (disorder)","type":"exact"},{"name":"gestational herpes","type":"exact"},{"name":"gestational pemphigoid","type":"exact"},{"name":"pemphigoid gestationis","type":"exact"},{"name":"pemphigus gestationis","type":"related"}],"termid":"MONDO:0006558","xrefs":{"Monarch":{"xref_id":"0006558"}}}


id: PBO:0058674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6802","termid":"PBO:0058674"}


id: FYPO:0005672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during mitosis","synonyms":[{"name":"decreased protein localisation to nucleus during mitosis","type":"exact"},{"name":"decreased protein localization to nucleus during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during mitotic M phase","type":"related"},{"name":"decreased protein localization to nucleus during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to nucleus during mitosis","type":"exact"}],"termid":"FYPO:0005672"}


id: PBO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH18 antisense RNA 1","termid":"PBO:0042499"}


id: PBO:0052444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 1","termid":"PBO:0052444"}


id: PBO:0050226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 4","termid":"PBO:0050226"}


id: GO:0033805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine, and S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sarcosine/dimethylglycine N-methyltransferase activity (obsolete GO:0033805)","synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"SDMT","type":"related"},{"name":"sarcosine dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"sarcosine dimethylglycine methyltransferase activity","type":"narrow"},{"name":"sarcosine/dimethylglycine N-methyltransferase activity","type":"exact"}],"termid":"GO:0033805"}


id: PBO:0058858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8087","termid":"PBO:0058858"}


id: PR:P87119
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu34 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger protein mug145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.03c","synonyms":[{"name":"Spom972h-meu34","type":"exact"},{"name":"meiotic expression up-regulated protein 34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 145 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87119"}


id: FYPO:0002566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"abolished histone methylation during vegetative growth","termid":"FYPO:0002565"},{"relation_name":"is_a","term_name":"abolished protein lysine methylation during vegetative growth","termid":"FYPO:0004488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K9me during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002566"}


id: MONDO:0020156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic ankyloblepharon (obsolete MONDO:0020156)","secondary_identifiers":["Orphanet:98565"],"termid":"MONDO:0020156","xrefs":{"Monarch":{"xref_id":"0020156"}}}


id: PR:P87058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sla1 gene.","definition_xrefs":["UniProtKB:P87058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.10c","synonyms":[{"name":"La autoantigen homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"La ribonucleoprotein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sla1","type":"exact"}],"termid":"PR:P87058"}


id: GO:1901899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of relaxation of cardiac muscle.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:19708671","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of relaxation of muscle","termid":"GO:1901079"},{"relation_name":"is_a","term_name":"regulation of relaxation of cardiac muscle","termid":"GO:1901897"},{"relation_name":"positively_regulates","term_name":"relaxation of cardiac muscle","termid":"GO:0055119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of relaxation of cardiac muscle","synonyms":[{"name":"activation of relaxation of cardiac muscle","type":"narrow"},{"name":"up regulation of relaxation of cardiac muscle","type":"exact"},{"name":"up-regulation of relaxation of cardiac muscle","type":"exact"},{"name":"upregulation of relaxation of cardiac muscle","type":"exact"}],"termid":"GO:1901899"}


id: PBO:0066289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member O, pseudogene","termid":"PBO:0066289"}


id: PBO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.3.2","termid":"PBO:0004968"}


id: PBO:0049306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 1","termid":"PBO:0049306"}


id: PBO:0113015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor for glycogen; cytosolic receptor for glycogen that mediates glycophagy, the autophagy of glycogen; induced during prolonged nitrogen starvation and highly expressed during sporulation, both glycophagy-inducing conditions; expression directly regulated by Ume6p, a metabolic and meiotic transcriptional regulator; contains a glycogen-binding domain (GBD) and an Atg8 family-interacting motif (AIM) proposed to facilitate sequestration of glycogen by autophagic isolation membranes","termid":"PBO:0113015"}


id: GO:0004691
data:
  {"annotated_genes":["SJAG_04312","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73747],"is_not":false,"summary":null,"term":"GO:0004691"},{"annotations":[71328],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0004862"}]},"cv_name":"molecular_function","definition":"cAMP-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["PMID:35053423","PMID:35805104","PMID:32935175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide-dependent protein kinase activity","termid":"GO:0004690"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003674","GO:0003824","GO:0004672","GO:0016740"],"is_obsolete":false,"name":"cAMP-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.7.11.11","Reactome:R-HSA-9861318","Reactome:R-HSA-5687088","Reactome:R-HSA-5617179","Reactome:R-HSA-163773","Reactome:R-HSA-5610720","Reactome:R-HSA-5610741","GO:0008602","Reactome:R-HSA-177275","Reactome:R-HSA-5617182","Reactome:R-HSA-163672","Reactome:R-HSA-5610717","Reactome:R-HSA-913451","Reactome:R-HSA-163676","Reactome:R-HSA-177284","Reactome:R-HSA-432232","Reactome:R-HSA-9838321"],"synonyms":[{"name":"3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"AMPK","type":"related"},{"name":"ATP:protein phosphotransferase (cAMP-dependent) activity","type":"related"},{"name":"PKA","type":"related"},{"name":"PKA C","type":"related"},{"name":"STK22","type":"related"},{"name":"adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"protein kinase A activity","type":"broad"}],"termid":"GO:0004691","terms_by_termid":{"GO:0004691":null,"GO:0004862":null}}


id: PBO:0082858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); hydrophilic homodimeric protein that acts in conjunction with SNARE proteins in targeting and fusion of ER to Golgi transport vesicles","termid":"PBO:0082858"}


id: PBO:0067787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 89","termid":"PBO:0067787"}


id: PBO:0063936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIMREG pseudogene 1","termid":"PBO:0063936"}


id: PBO:0053063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linker for activation of T cells family member 2","termid":"PBO:0053063"}


id: GO:1903221
data:
  {"annotated_genes":["SJAG_01584","SJAG_02214","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89340,106454,116717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic recombination-dependent replication fork processing. Regulation of mitotic recombination prevents recombination between inappropriate homologous sequences.","definition_xrefs":["PMID:23093942","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"mitotic recombination-dependent replication fork processing","termid":"GO:1990426"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02214":null,"SJAG_03300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"prevention of genomic instability induced by DNA replication fork arrest","type":"related"},{"name":"regulation of mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"regulation of mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork processing","type":"exact"},{"name":"regulation of mitotic recombination involved in replication fork restart","type":"related"},{"name":"regulation of mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1903221","terms_by_termid":{"GO:0120292":null}}


id: MONDO:0020603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genodermatosis with great phenotypic variation and characterized most commonly by ichthyosis, chondrodysplasia punctata (CDP), asymmetric shortening of the limbs, cataracts and short stature.","definition_xrefs":["Orphanet:35173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"is_a","term_name":"X-linked chondrodysplasia punctata","termid":"MONDO:0010556"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata 2","secondary_identifiers":["GARD:6189","OMIM:302960","DOID:0080352","MEDGEN:79381","NANDO:1200630","NANDO:2201357","NORD:1005","UMLS:C0282102"],"synonyms":[{"name":"CDPX2","type":"exact"},{"name":"CDPXD","type":"exact"},{"name":"Conrad Hunermann Happle syndrome","type":"exact"},{"name":"Conradi Hunermann syndrome","type":"exact"},{"name":"Conradi Hünermann Syndrome","type":"exact"},{"name":"Conradi-Hunermann syndrome","type":"exact"},{"name":"Conradi-Hunermann-Happle syndrome","type":"exact"},{"name":"Conradi-Hünermann-Happle syndrome","type":"exact"},{"name":"EBP chondrodysplasia punctata","type":"exact"},{"name":"Happle syndrome","type":"exact"},{"name":"X-linked chondrodysplasia punctata type 2","type":"exact"},{"name":"chondrodysplasia punctata 2 X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata 2, X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata caused by mutation in EBP","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant, X-linked dominant","type":"exact"}],"termid":"MONDO:0020603","xrefs":{"Monarch":{"xref_id":"0020603"}}}


id: GO:1900009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["PMID:15020466","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900009)","synonyms":[{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"positive regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"positive regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"up regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900009"}


id: PBO:0067093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 130, pseudogene","termid":"PBO:0067093"}


id: PBO:0084709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane carnitine transporter; required for carnitine-dependent transport of acetyl-CoA from peroxisomes to mitochondria during fatty acid beta-oxidation; human homolog SLC25A20 complements yeast null mutant","termid":"PBO:0084709"}


id: GO:0016475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the size of the nucleus with respect to its cytoplasm is sensed by a cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"},{"relation_name":"part_of","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nuclear:cytoplasmic ratio","synonyms":[{"name":"interpretation of nuclear:cytoplasmic ratio","type":"exact"},{"name":"sensing of nuclear:cytoplasmic ratio","type":"exact"}],"termid":"GO:0016475"}


id: PBO:0079975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 13","termid":"PBO:0079975"}


id: GO:0042132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 1,6-bisphosphate + H2O = D-fructose 6-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"fructose 1,6-bisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-70479","RHEA:11064","MetaCyc:F16BDEPHOS-RXN"],"synonyms":[{"name":"D-fructose 1,6-diphosphatase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate 1-phosphohydrolase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate phosphatase activity","type":"related"},{"name":"FBPase activity","type":"related"},{"name":"fructose 1,6-bisphosphatase activity","type":"related"},{"name":"fructose 1,6-bisphosphate phosphatase activity","type":"related"},{"name":"fructose 1,6-diphosphatase activity","type":"related"},{"name":"fructose 1,6-diphosphate phosphatase activity","type":"related"},{"name":"fructose bisphosphate phosphatase activity","type":"related"},{"name":"fructose diphosphatase activity","type":"related"},{"name":"fructose diphosphate phosphatase activity","type":"related"},{"name":"fructose-1,6-bisphosphatase activity","type":"related"},{"name":"fructose-bisphosphatase activity","type":"broad"},{"name":"hexose bisphosphatase activity","type":"related"},{"name":"hexose diphosphatase activity","type":"related"},{"name":"hexosediphosphatase activity","type":"broad"}],"termid":"GO:0042132"}


id: MONDO:0009610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-methylglutaconic aciduria (3-MGA) type I is an inborn error of leucine metabolism with a variable clinical phenotype ranging from mildly delayed speech to psychomotor retardation, coma, failure to thrive, metabolic acidosis and dystonia.","definition_xrefs":["Orphanet:67046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 1","secondary_identifiers":["NANDO:1200990","DOID:0110002","icd11.foundation:899935975","OMIM:250950","NCIT:C98683","SCTID:237951008","UMLS:C0342727","MEDGEN:90994","GARD:10321","MESH:C562801"],"synonyms":[{"name":"3 alpha methylglutaconic aciduria type I","type":"related"},{"name":"3 methylglutaconic aciduria type 1","type":"related"},{"name":"3 methylglutaconyl CoA hydratase deficiency","type":"related"},{"name":"3-METHYLGLUTACONIC aciduria, type I","type":"related"},{"name":"3-MGCA type I (3-MGCA-1)","type":"related"},{"name":"3-Methylglutaconic aciduria, type 1","type":"related"},{"name":"3-Mg-Coa-hydratase deficiency","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in AUH","type":"exact"},{"name":"3-methylglutaconic aciduria caused by mutation in auh","type":"exact"},{"name":"3-methylglutaconic aciduria type 1","type":"exact"},{"name":"3-methylglutaconic aciduria type I","type":"exact"},{"name":"3-methylglutaconyl-CoA hydratase deficiency","type":"exact"},{"name":"3-methylglutaconyl-CoA hydratase deficiency (auh defect)","type":"related"},{"name":"3-methylglutaconyl-Coa hydratase deficiency","type":"related"},{"name":"3MG CoA hydratase deficiency","type":"related"},{"name":"3MG-CoA hydratase deficiency","type":"exact"},{"name":"AUH 3-methylglutaconic aciduria","type":"exact"},{"name":"MGA type I","type":"exact"},{"name":"MGA1","type":"exact"},{"name":"MGCA1","type":"related"},{"name":"Mga, type 1","type":"related"},{"name":"auh 3-methylglutaconic aciduria","type":"exact"}],"termid":"MONDO:0009610","xrefs":{"Monarch":{"xref_id":"0009610"}}}


id: MONDO:0030134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 2","secondary_identifiers":["DOID:0081298","MEDGEN:1718769","UMLS:C5394548","GARD:16397","OMIM:618940"],"synonyms":[{"name":"OCULOPHARYNGODISTAL MYOPATHY 2","type":"exact"},{"name":"OPDM2","type":"exact"},{"name":"oculopharyngodistal myopathy 2","type":"exact"}],"termid":"MONDO:0030134","xrefs":{"Monarch":{"xref_id":"0030134"}}}


id: MONDO:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebrooculofacioskeletal syndrome (obsolete MONDO:0000010)","termid":"MONDO:0000010","xrefs":{"Monarch":{"xref_id":"0000010"}}}


id: PBO:0043031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHMP4A pseudogene 1","termid":"PBO:0043031"}


id: GO:0120508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the reaction of GTP and mannose-1-phosphate to form GDP-mannose. The complex is a homodimer in most bacteria and a heterodimer in most eukaryotes. In humans, it is composed of a catalytic beta subunit (GMPPB) and a regulatory alpha subunit (GMPPA).","definition_xrefs":["PMID:33986552","GOC:sjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GDP-mannose pyrophosphorylase complex","synonyms":[{"name":"GMPPA-GMPPB complex","type":"exact"}],"termid":"GO:0120508"}


id: PBO:0031751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_acetylation","termid":"PBO:0031751"}


id: GO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyadipate + NAD+ = 2-oxoadipate + H+ + NADH.","definition_xrefs":["RHEA:14793","EC:1.1.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-oxoadipate reductase activity","secondary_identifiers":["KEGG_REACTION:R01932","MetaCyc:2-OXOADIPATE-REDUCTASE-RXN"],"synonyms":[{"name":"2-hydroxyadipate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"2-ketoadipate reductase activity","type":"related"},{"name":"alpha-ketoadipate reductase activity","type":"related"}],"termid":"GO:0047550"}


id: PBO:0052019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jumonji domain containing 8","termid":"PBO:0052019"}


id: FYPO:0002802
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell has a nucleus in an abnormal location at the cell cortex when the cell is subject to nitrogen starvation. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"nucleus mislocalized to cell cortex during nitrogen starvation","synonyms":[{"name":"nuclear displacement to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus displaced to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalised to cell cortex during nitrogen starvation","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen depletion","type":"exact"},{"name":"nucleus mislocalized to cell cortex during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0002802"}


id: PBO:0091394
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small conserved C term region SMGDKMKGNMEKMAGKLTRDPELVQKGEDLKTG","termid":"PBO:0091394"}


id: MONDO:0011251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","secondary_identifiers":["MEDGEN:400705","OMIM:602556","MESH:C566524","UMLS:C1865203"],"synonyms":[{"name":"facial dysmorphism, cleft palate, hearing loss, and camptodactyly","type":"exact"}],"termid":"MONDO:0011251","xrefs":{"Monarch":{"xref_id":"0011251"}}}


id: MONDO:1010048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida occulta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida occulta, non-human animal","secondary_identifiers":["OMIA:000934"],"termid":"MONDO:1010048","xrefs":{"Monarch":{"xref_id":"1010048"}}}


id: PATO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000138 absolute orientation (obsolete PATO:0000138)","termid":"PATO:0000138"}


id: GO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the atrioventricular bundle. These cells are specialized cardiomyocytes that transmit signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"bundle of His development","termid":"GO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular bundle cell differentiation","synonyms":[{"name":"AV bundle cell differentiation","type":"exact"}],"termid":"GO:0003167"}


id: PBO:0086395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cytochrome b5 reductase, localized to the plasma membrane; may be involved in regulation of lifespan; required for maturation of Gas1p and Pho8p, proposed to be involved in protein trafficking; PGA3 has a paralog, AIM33, that arose from the whole genome duplication","termid":"PBO:0086395"}


id: MONDO:0017724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tay-Sachs disease","termid":"MONDO:0010100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559","MONDO:0002525","MONDO:0005244","MONDO:0002561","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"Tay-Sachs disease, b variant, infantile form","secondary_identifiers":["GARD:21324","MEDGEN:1863558","UMLS:C5925031","SCTID:238021002","Orphanet:309178"],"synonyms":[{"name":"GM2 gangliosidosis, B variant, infantile form","type":"exact"},{"name":"hexosaminidase A deficiency, infantile form","type":"exact"}],"termid":"MONDO:0017724","xrefs":{"Monarch":{"xref_id":"0017724"}}}


id: PBO:0044484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP26C1 divergent transcript","termid":"PBO:0044484"}


id: GO:0010702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histolysis (obsolete GO:0010702)","termid":"GO:0010702"}


id: PR:O14210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies2 gene.","definition_xrefs":["UniProtKB:O14210","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.05c","synonyms":[{"name":"Spom972h-ies2","type":"exact"}],"termid":"PR:O14210"}


id: PBO:0064458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-glucosyltransferase 3","termid":"PBO:0064458"}


id: GO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an endocardial cushion cell over time, from its formation to the mature state.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell development","termid":"GO:0061444"}


id: PBO:0005326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Cgi121 (predicted)","termid":"PBO:0005326"}


id: MONDO:0003819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature or immature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric ovarian germ cell tumor","termid":"MONDO:0003760"},{"relation_name":"is_a","term_name":"ovarian teratoma","termid":"MONDO:0005602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood teratoma of the ovary","secondary_identifiers":["NCIT:C6554","UMLS:C1332992","DOID:6230","MEDGEN:272466"],"synonyms":[{"name":"childhood ovarian teratoma","type":"exact"},{"name":"childhood teratoma of ovary","type":"exact"},{"name":"childhood teratoma of the ovary","type":"exact"},{"name":"ovarian teratoma of childhood","type":"exact"},{"name":"paediatric ovarian teratoma","type":"exact"},{"name":"paediatric teratoma of ovary","type":"exact"},{"name":"paediatric teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian teratoma","type":"exact"},{"name":"pediatric teratoma of ovary","type":"exact"},{"name":"pediatric teratoma of the ovary","type":"exact"}],"termid":"MONDO:0003819","xrefs":{"Monarch":{"xref_id":"0003819"}}}


id: PBO:0049138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein signaling modulator 2","termid":"PBO:0049138"}


id: PBO:0079342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 26, pseudogene","termid":"PBO:0079342"}


id: PBO:0111901
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINT/PCI domain","termid":"PBO:0111901"}


id: GO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 5S rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)","termid":"GO:0002108"}


id: MOD:00386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue to form L-lysine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0381","PubMed:10504696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,5-diaminopentyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,5-diaminopentanyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"Anemonia majano fluorescent protein FP486 chromophore","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Lys-Gly)","type":"exact"},{"name":"L-lysine 5-imidazolinone glycine","type":"exact"},{"name":"[2-(1,5-diaminopentanyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"lysyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00386"}


id: PBO:0055545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2981","termid":"PBO:0055545"}


id: GO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by detection of stimuli and a neurological response.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nervous system process involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"blood pressure regulation by neurological process","type":"exact"},{"name":"fast control of arterial pressure","type":"related"},{"name":"neurological process involved in regulation of systemic arterial blood pressure","type":"exact"},{"name":"neurological system process involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001976"}


id: PBO:0027796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_oxaliplatin","termid":"PBO:0027796"}


id: PBO:0086868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase with unknown cellular role; KKQ8 has a paralog, HAL5, that arose from the whole genome duplication","termid":"PBO:0086868"}


id: PBO:0046082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 7","termid":"PBO:0046082"}


id: PBO:0078732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 5-1","termid":"PBO:0078732"}


id: MONDO:0031007
data:
  {"annotated_genes":["SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85932],"is_not":false,"summary":null,"term":"MONDO:0031007"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"NMNAT1-related retinopathy","termid":"MONDO:0800101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, sensorineural hearing loss, impaired intellectual development, and leber congenital amaurosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543257","GARD:18025","MEDGEN:1780157","DOID:0112290","OMIM:619260","Orphanet:611207"],"synonyms":[{"name":"SHILCA","type":"exact"},{"name":"SHILCA syndrome","type":"exact"},{"name":"spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual developmental disorder, and Leber congenital amaurosis","type":"exact"}],"termid":"MONDO:0031007","terms_by_termid":{"MONDO:0031007":null},"xrefs":{"Monarch":{"xref_id":"0031007"}}}


id: PBO:0067652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 827, pseudogene","termid":"PBO:0067652"}


id: PBO:0113450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; detects polyadenylation signal in nascent pre-mRNA and triggers 3' end formation of mRNA via cleavage and polyadenylation; binds pre-mRNA via zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; relocalizes to cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0113450"}


id: PBO:0069356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 616, pseudogene","termid":"PBO:0069356"}


id: PBO:0052998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 2 pseudogene 1","termid":"PBO:0052998"}


id: PBO:0072030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS10-NUDT3 readthrough","termid":"PBO:0072030"}


id: GO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become trophectoderm cells.","definition_xrefs":["GOC:dph","ISBN:0124020607","ISBN:0198542771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell fate commitment","synonyms":[{"name":"trophectoderm cell fate commitment","type":"exact"}],"termid":"GO:0001830"}


id: MONDO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The use of a drug for a reason other than which it was intended or in a manner or in quantities other than directed.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance-related disorder","termid":"MONDO:0002494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substance abuse","secondary_identifiers":["MEDGEN:152849","SCTID:66214007","UMLS:C0740858","ICD9:305.90","DOID:302"],"termid":"MONDO:0002491","xrefs":{"Monarch":{"xref_id":"0002491"}}}


id: GO:0120250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:39023","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fatty acid omega-hydroxylase activity","synonyms":[{"name":"omega-hydroxylase activity","type":"broad"}],"termid":"GO:0120250"}


id: PBO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 8","termid":"PBO:0071324"}


id: PBO:0059631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTCH2 pseudogene 3","termid":"PBO:0059631"}


id: MONDO:0022821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital benign spinal muscular atrophy dominant","termid":"MONDO:0022821","xrefs":{"Monarch":{"xref_id":"0022821"}}}


id: MONDO:0017180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 10","termid":"MONDO:0016961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"10q22.3q23.3 microduplication syndrome","secondary_identifiers":["UMLS:C5190512","Orphanet:276422","GARD:21052","MEDGEN:1682781"],"synonyms":[{"name":"dup(10)(q22.3q23.3)","type":"exact"},{"name":"trisomy 10q22.3q23.3","type":"exact"}],"termid":"MONDO:0017180","xrefs":{"Monarch":{"xref_id":"0017180"}}}


id: GO:0036493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation in response to ER stress","type":"exact"}],"termid":"GO:0036493"}


id: PBO:0043686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 2","termid":"PBO:0043686"}


id: GO:1900240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"negatively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phenotypic switching","synonyms":[{"name":"down regulation of phenotypic dimorphism","type":"related"},{"name":"down regulation of phenotypic switching","type":"exact"},{"name":"down-regulation of phenotypic dimorphism","type":"related"},{"name":"down-regulation of phenotypic switching","type":"exact"},{"name":"downregulation of phenotypic dimorphism","type":"related"},{"name":"downregulation of phenotypic switching","type":"exact"},{"name":"inhibition of phenotypic dimorphism","type":"related"},{"name":"inhibition of phenotypic switching","type":"narrow"},{"name":"negative regulation of phenotypic dimorphism","type":"related"}],"termid":"GO:1900240"}


id: PBO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 70","termid":"PBO:0042013"}


id: PBO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108E (pseudogene)","termid":"PBO:0044816"}


id: FYPO:0001156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells cause the pH of their growth medium to decrease by a greater amount than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered effect on growth medium","termid":"FYPO:0001155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased pH of growth medium","synonyms":[{"name":"decreased pH level of growth medium","type":"exact"},{"name":"increased growth medium acidification","type":"exact"},{"name":"reduced pH of growth medium","type":"exact"}],"termid":"FYPO:0001156"}


id: PBO:0067908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 210","termid":"PBO:0067908"}


id: PR:000028940
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1-like transcription factor oxidized form in Schizosaccharomyces pombe. This form is produced under oxidative stress.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-1-like transcription factor","termid":"PR:000027897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pap1/Ox+","pombase_gene_id":"SPAC1783.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: AP-1-like transcription factor oxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-pap1/Ox+","type":"exact"},{"name":"pap1/Ox+","type":"exact"}],"termid":"PR:000028940"}


id: PBO:0109125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basonuclin zinc finger protein 1","termid":"PBO:0109125"}


id: GO:1902980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in premeiotic DNA replication (obsolete GO:1902980)","synonyms":[{"name":"synthesis of RNA primer involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902980"}


id: FYPO:0002555
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119573,119572,119584,119580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abolished protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002555","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: MOD:00248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:1880060","RESID:AA0243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-phenylalanine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00248"}


id: PBO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated kinase 1A","termid":"PBO:0048407"}


id: PR:O60054
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC56F2.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein arp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.03","synonyms":[{"name":"Spom972h-SPBC56F2.03","type":"exact"}],"termid":"PR:O60054"}


id: GO:0044118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont in host cell (obsolete GO:0044118)","termid":"GO:0044118"}


id: PBO:0027232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_hydroxyurea","termid":"PBO:0027232"}


id: PBO:0077601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11C, pseudogene","termid":"PBO:0077601"}


id: PBO:0117417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 12","termid":"PBO:0117417"}


id: PBO:0083227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR045C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083227"}


id: PBO:0066767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 65","termid":"PBO:0066767"}


id: MONDO:0014948
data:
  {"annotated_genes":["SJAG_02482"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87532],"is_not":false,"summary":null,"term":"MONDO:0014948"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02482":null},"genotype_count":0,"is_obsolete":false,"name":"short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934653","UMLS:C4310686","Orphanet:659702","OMIM:617164"],"synonyms":[{"name":"SRMMD","type":"exact"},{"name":"short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay","type":"exact"},{"name":"short stature, rhizomelic, with microcephaly, micrognathia, and developmental delay; SRMMD","type":"exact"}],"termid":"MONDO:0014948","terms_by_termid":{"MONDO:0014948":null},"xrefs":{"Monarch":{"xref_id":"0014948"}}}


id: PBO:0061773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF","termid":"PBO:0061773"}


id: MONDO:0022496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by severe intrauterine growth retardation, psychomotor delay and recurrent infections, craniofacial dysostosis, a progeroid appearance, arthrogryposis and camptodactylia.","definition_xrefs":["PMID:196478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis IUGR thoracic dystrophy","synonyms":[{"name":"Van Bervliet syndrome","type":"related"}],"termid":"MONDO:0022496","xrefs":{"Monarch":{"xref_id":"0022496"}}}


id: PBO:0042009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 65","termid":"PBO:0042009"}


id: PBO:0042757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP19 pseudogene 1","termid":"PBO:0042757"}


id: MONDO:0042964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Machado-Joseph disease characterized by Parkinsonian symptoms that respond particularly well to levodopa treatment.","definition_xrefs":["Wikipedia:Machado–Joseph_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Machado-Joseph disease","termid":"MONDO:0007182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"Machado-Joseph disease type 4","secondary_identifiers":["ICD9:334.3","SCTID:91956006","MEDGEN:673233","UMLS:C0686352"],"synonyms":[{"name":"azorean disease, type iv","type":"exact"}],"termid":"MONDO:0042964","xrefs":{"Monarch":{"xref_id":"0042964"}}}


id: PBO:0045618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 29 (pseudogene)","termid":"PBO:0045618"}


id: PBO:0056343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase kinase 2","termid":"PBO:0056343"}


id: MONDO:0043762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal pregnancy in which the conception is implanted in the fallopian tube.","definition_xrefs":["NCIT:C92946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectopic pregnancy","termid":"MONDO:0000755"},{"relation_name":"is_a","term_name":"fallopian tube disorder","termid":"MONDO:0002156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubal pregnancy","secondary_identifiers":["icd11.foundation:913821868","MEDGEN:10901","MESH:D011274","SCTID:79586000","UMLS:C0032994"],"synonyms":[{"name":"Pregnancies, tubal","type":"related"},{"name":"ectopic pregnancy of fallopian tube","type":"exact"},{"name":"fallopian pregnancy","type":"related"},{"name":"fallopian tube ectopic pregnancy","type":"exact"},{"name":"fallopian tube pregnancy","type":"related"},{"name":"tubal Pregnancies","type":"related"},{"name":"tubal pregnancy","type":"exact"}],"termid":"MONDO:0043762","xrefs":{"Monarch":{"xref_id":"0043762"}}}


id: GO:0034364
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipoprotein particle with a high density (typically 1.063-1.21 g/ml) and a diameter of 5-10 nm that contains APOAs and may contain APOCs and APOE; found in blood and carries lipids from body tissues to the liver as part of the reverse cholesterol transport process.","definition_xrefs":["GOC:BHF","GOC:pde","GOC:expert_pt","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle","termid":"GO:0034358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"high-density lipoprotein particle","synonyms":[{"name":"HDL complex","type":"exact"},{"name":"HDL particle","type":"exact"},{"name":"HDL2","type":"related"},{"name":"HDL3","type":"related"},{"name":"high-density lipoprotein class complex","type":"exact"}],"termid":"GO:0034364"}


id: PBO:0031304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_resistance_to_chemical_during_vegetative_growth","termid":"PBO:0031304"}


id: FYPO:0002576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin binding","termid":"FYPO:0002576"}


id: PBO:0089432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1","termid":"PBO:0089432"}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["GO:0031122","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: MONDO:0011356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosis, Dupuytren subungual","secondary_identifiers":["OMIM:603656","MESH:C535723","UMLS:C1863622","MEDGEN:350935"],"synonyms":[{"name":"Dupuytren subungual exostosis","type":"related"},{"name":"exostosis, Dupuytren subungual","type":"exact"},{"name":"subungual exostoses","type":"related"}],"termid":"MONDO:0011356","xrefs":{"Monarch":{"xref_id":"0011356"}}}


id: GO:0098739
data:
  {"annotated_genes":["SJAG_03631","SJAG_03970","SJAG_04506","SJAG_04246","SJAG_04718","SJAG_01090","SJAG_05175","SJAG_03591","SJAG_02463","SJAG_05346","SJAG_02968","SJAG_04551","SJAG_04714","SJAG_02877","SJAG_03595","SJAG_02780","SJAG_01406","SJAG_01983","SJAG_04637","SJAG_03960","SJAG_01353","SJAG_05229","SJAG_00922","SJAG_04830","SJAG_02605","SJAG_02779","SJAG_00057","SJAG_01660","SJAG_02883","SJAG_00296","SJAG_00991","SJAG_03777","SJAG_03608","SJAG_01493","SJAG_04673","SJAG_04668","SJAG_04185","SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[72144,79599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[92740,114739,67331,74816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[114892,88281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[117508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[92400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905136"},{"annotations":[72173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[110957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[92831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[95857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[112851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[113518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[100681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[100682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[101973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[101974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"},{"annotations":[96100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[73390,72443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[91557,113668],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[88431],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[88432],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[80298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[72855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[102463],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[93675,99204,92081,110850],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[99205,92082,93676],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[93677],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[70932,72638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[101536,100675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905647"},{"annotations":[101975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"},{"annotations":[96102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"},{"annotations":[110430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[108298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[101000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[103328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"},{"annotations":[95870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"},{"annotations":[113519,104492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of some substance from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"import into cell","termid":"GO:0098657"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_00296":null,"SJAG_00922":null,"SJAG_00991":null,"SJAG_01090":null,"SJAG_01353":null,"SJAG_01406":null,"SJAG_01493":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02463":null,"SJAG_02605":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02877":null,"SJAG_02883":null,"SJAG_02968":null,"SJAG_03591":null,"SJAG_03595":null,"SJAG_03608":null,"SJAG_03631":null,"SJAG_03777":null,"SJAG_03960":null,"SJAG_03970":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04506":null,"SJAG_04551":null,"SJAG_04637":null,"SJAG_04668":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04718":null,"SJAG_04830":null,"SJAG_04905":null,"SJAG_05175":null,"SJAG_05229":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"import across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"uptake","type":"broad"}],"termid":"GO:0098739","terms_by_termid":{"GO:0071578":null,"GO:0097638":null,"GO:0097639":null,"GO:0098702":null,"GO:0098703":null,"GO:0098705":null,"GO:0098708":null,"GO:0098709":null,"GO:0098710":null,"GO:0098711":null,"GO:0098714":null,"GO:0098715":null,"GO:0098716":null,"GO:0098717":null,"GO:0098720":null,"GO:0098721":null,"GO:0106081":null,"GO:0106082":null,"GO:0140125":null,"GO:0140206":null,"GO:0140207":null,"GO:0140270":null,"GO:0140425":null,"GO:1901583":null,"GO:1902434":null,"GO:1904679":null,"GO:1905135":null,"GO:1905136":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1905665":null,"GO:1905949":null,"GO:1990573":null}}


id: PBO:0028643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028643"}


id: GO:0033626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of integrin activation by cell surface receptor linked signal transduction. This can occur by increased affinity of an integrin for its extracellular ligands.","definition_xrefs":["GOC:add","PMID:12213832","PMID:14754902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"positive regulation of integrin activation","termid":"GO:0033625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0023052","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of integrin activation by cell surface receptor linked signal transduction","synonyms":[{"name":"cell surface receptor linked signal transduction leading to integrin activation","type":"exact"},{"name":"cell surface receptor linked signal transduction leading to integrin complex activation","type":"exact"}],"termid":"GO:0033626"}


id: PBO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp10 (predicted)","termid":"PBO:0001868"}


id: FYPO:0003359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to myriocin. Cells stop growing (and may die) at a concentration of myriocin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to myriocin during vegetative growth","synonyms":[{"name":"hypersensitive to myriocin during vegetative growth","type":"exact"},{"name":"sensitive to myriocin during mitotic cell cycle","type":"related"},{"name":"sensitivity to chemicals interfering with lipids during vegetative growth","type":"broad"}],"termid":"FYPO:0003359"}


id: GO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a NK T cell population by cell division.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:10704459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"},{"relation_name":"is_a","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NK T cell proliferation","synonyms":[{"name":"NK T lymphocyte proliferation","type":"exact"},{"name":"NK T-cell proliferation","type":"exact"},{"name":"NK T-lymphocyte proliferation","type":"exact"},{"name":"NKT cell proliferation","type":"exact"},{"name":"NT cell proliferation","type":"exact"},{"name":"natural T cell proliferation","type":"exact"},{"name":"natural killer T cell proliferation","type":"exact"}],"termid":"GO:0001866"}


id: MOD:01113
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-(p-biphenyl)isopropyl-oxycarbonyl","synonyms":[{"name":"Bpoc","type":"exact"}],"termid":"MOD:01113"}


id: MONDO:0044887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin lymphoma that arises from the central nervous system.","definition_xrefs":["NCIT:C114779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system lymphoma","termid":"MONDO:0002571"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"central nervous system non-hodgkin lymphoma","secondary_identifiers":["MEDGEN:745669","SCTID:448254007","UMLS:C2213246"],"synonyms":[{"name":"Central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"Primary Central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"central nervous system non-Hodgkin lymphoma","type":"exact"},{"name":"non-Hodgkin lymphoma of central nervous system","type":"exact"}],"termid":"MONDO:0044887","xrefs":{"Monarch":{"xref_id":"0044887"}}}


id: GO:0007576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell aging process that results in the nucleolus breaking down into fragments.","definition_xrefs":["PMID:9271578","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation (obsolete GO:0007576)","synonyms":[{"name":"nucleolar size increase","type":"related"}],"termid":"GO:0007576"}


id: GO:0140937
data:
  {"annotated_genes":["SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109784],"is_not":false,"summary":null,"term":"GO:0140937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 12) + H2O = histone H4 L-lysine (position 12) + acetate. This reaction represents the removal of an acetyl group from lysine at position 12 of the histone H4 protein.","definition_xrefs":["GOC:vw","PMID:15293224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016810","GO:0003674","GO:0019213","GO:0003824","GO:0033558","GO:0016787"],"is_obsolete":false,"name":"histone H4K12 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H4-K12 deacetylase activity","type":"exact"},{"name":"histone H4-K12 deacetylation","type":"related"},{"name":"histone H4K12 deacetylase activity","type":"broad"},{"name":"histone H4K12 deacetylation","type":"related"},{"name":"histone deacetylase activity (H4-K12 specific)","type":"exact"}],"termid":"GO:0140937","terms_by_termid":{"GO:0140937":null}}


id: GO:0051561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion homeostasis","termid":"GO:0051560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial calcium ion concentration","synonyms":[{"name":"elevation of calcium ion concentration in mitochondria","type":"exact"},{"name":"elevation of calcium ion concentration in mitochondrion","type":"exact"},{"name":"elevation of mitochondrial calcium ion concentration","type":"exact"},{"name":"mitochondrial calcium ion concentration elevation","type":"exact"}],"termid":"GO:0051561"}


id: MONDO:0015604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"middle ear anomaly","secondary_identifiers":["MEDGEN:540027","UMLS:C0266599","Orphanet:164004","MedDRA:10060957","GARD:20056"],"termid":"MONDO:0015604","xrefs":{"Monarch":{"xref_id":"0015604"}}}


id: MONDO:0015987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scimitar syndrome is characterized by a combination of cardiopulmonary anomalies including partial anomalous pulmonary venous return connection of the right lung to the inferior caval vein leading to the creation of a left-to-right shunt.","definition_xrefs":["Orphanet:185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital pulmonary venous return anomaly","termid":"MONDO:0017705"},{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"scimitar syndrome","secondary_identifiers":["EFO:1001167","MedDRA:10051951","icd11.foundation:1321054364","MESH:D012587","MEDGEN:20675","NCIT:C85056","ICD9:747.49","SCTID:39905002","UMLS:C0036400","GARD:18680"],"synonyms":[{"name":"Epibronchial right pulmonary vein syndrome","type":"exact"},{"name":"Halasz syndrome","type":"exact"},{"name":"congenital pulmonary venolobar syndrome","type":"exact"},{"name":"hypogenetic lung syndrome","type":"exact"}],"termid":"MONDO:0015987","xrefs":{"Monarch":{"xref_id":"0015987"}}}


id: PBO:0067209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 274, pseudogene","termid":"PBO:0067209"}


id: GO:0097250
data:
  {"annotated_genes":["SJAG_02975","SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95009,102878],"is_not":false,"summary":null,"term":"GO:0097250"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of respiratory enzyme complexes I, III and IV of the mitochondrial inner membrane to form a large supercomplex.","definition_xrefs":["PMID:30030361","PMID:32311046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02975":null,"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007005","GO:0065003"],"is_obsolete":false,"name":"mitochondrial respirasome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial respiratory chain supercomplex assembly","type":"exact"},{"name":"mitochondrial respiratory supercomplex assembly","type":"exact"}],"termid":"GO:0097250","terms_by_termid":{"GO:0097250":null}}


id: PBO:0013817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A4","termid":"PBO:0013817"}


id: PBO:0068709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 90, pseudogene","termid":"PBO:0068709"}


id: MONDO:0975829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia","termid":"MONDO:0019403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia, congenital dyserythropoietic, type IVb","secondary_identifiers":["OMIM:620969"],"termid":"MONDO:0975829","xrefs":{"Monarch":{"xref_id":"0975829"}}}


id: PBO:0090574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L60","termid":"PBO:0090574"}


id: PBO:0067058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 79, pseudogene","termid":"PBO:0067058"}


id: GO:0110119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of very-low-density lipoprotein particle clearance.","definition_xrefs":["GOC:rph","PMID:25510864","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of very-low-density lipoprotein particle clearance","termid":"GO:0010915"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"},{"relation_name":"positively_regulates","term_name":"very-low-density lipoprotein particle clearance","termid":"GO:0034447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of very-low-density lipoprotein particle clearance","termid":"GO:0110119"}


id: PBO:0046239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 33","termid":"PBO:0046239"}


id: MOD:00001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an alkyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylated residue","synonyms":[{"name":"AlkylRes","type":"exact"}],"termid":"MOD:00001"}


id: GO:0031163
data:
  {"annotated_genes":["SJAG_02994","SJAG_03222","SJAG_03862","SJAG_01238","SJAG_00186","SJAG_00894","SJAG_00455","SJAG_02457","SJAG_04014","SJAG_03701","SJAG_02895","SJAG_00532","SJAG_04016","SJAG_00066","SJAG_02866","SJAG_01417","SJAG_01063","SJAG_02306","SJAG_01615","SJAG_04397","SJAG_02497","SJAG_00972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93302,68046,101928,98587,110185,114177,103424,78516,93533,99567,109991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044571"},{"annotations":[88561,109562,101929,93120,110172,99260,118153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044572"},{"annotations":[59038,57359,89614,79403,68826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016226"}]},"cv_name":"biological_process","definition":"The incorporation of a metal and exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah","GOC:pde","GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00186":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_00972":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_01417":null,"SJAG_01615":null,"SJAG_02306":null,"SJAG_02457":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04014":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"metallo-sulfur cluster assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"metal-sulfur cluster assembly","type":"exact"},{"name":"metallo-sulfur cluster biosynthesis","type":"related"},{"name":"metallo-sulphur cluster assembly","type":"exact"}],"termid":"GO:0031163","terms_by_termid":{"GO:0016226":null,"GO:0044571":null,"GO:0044572":null}}


id: FYPO:0005803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the lateral part of the cell occurs more slowly than normal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of protein movement within plasma membrane at cell side","synonyms":[{"name":"decreased rate of protein movement within plasma membrane at cell side during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein movement within plasma membrane at cell side during vegetative growth","type":"exact"},{"name":"decreased rate of protein movement within plasma membrane at lateral part of cell","type":"exact"},{"name":"reduced rate of protein movement within plasma membrane at cell side","type":"exact"},{"name":"slow protein movement within plasma membrane at cell side","type":"exact"}],"termid":"FYPO:0005803"}


id: PR:O14299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wis4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase wis4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.02","synonyms":[{"name":"MAP kinase kinase kinase wak1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAP kinase kinase kinase wik1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-wis4","type":"exact"}],"termid":"PR:O14299"}


id: GO:0017102
data:
  {"annotated_genes":["SJAG_01159","SJAG_02263","SJAG_03277"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70497,80227,105529],"is_not":false,"summary":null,"term":"GO:0017102"}]},"cv_name":"cellular_component","definition":"A complex consisting of methionyl- and glutamyl-tRNA synthetases. The tRNA synthetases present in the complex bind to their cognate tRNAs more efficiently than they do as monomers.","definition_xrefs":["GOC:mcc","PMID:11069915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_02263":null,"SJAG_03277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"methionyl glutamyl tRNA synthetase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017102","terms_by_termid":{"GO:0017102":null}}


id: MONDO:0013596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nonsyndromic congenital nail disorder 10 (obsolete MONDO:0013596)","secondary_identifiers":["OMIM:614157"],"termid":"MONDO:0013596","xrefs":{"Monarch":{"xref_id":"0013596"}}}


id: MONDO:0003415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemoglobin d disease (obsolete MONDO:0003415)","termid":"MONDO:0003415","xrefs":{"Monarch":{"xref_id":"0003415"}}}


id: MONDO:1011770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of digits, non-human animal","secondary_identifiers":["OMIA:001665"],"termid":"MONDO:1011770","xrefs":{"Monarch":{"xref_id":"1011770"}}}


id: PBO:0053590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 616","termid":"PBO:0053590"}


id: MONDO:0022934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Davis Lafer syndrome","secondary_identifiers":["MEDGEN:419708","MESH:C535989","UMLS:C2931077"],"synonyms":[{"name":"Lafer Davis syndrome","type":"related"},{"name":"intellectual disability unusual facies Davis Lafer type","type":"related"},{"name":"mental retardation unusual facies Davis Lafer type","type":"related"}],"termid":"MONDO:0022934","xrefs":{"Monarch":{"xref_id":"0022934"}}}


id: PBO:0003642
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds FLEX 5'-GTAAAYA-3'","termid":"PBO:0003642"}


id: PBO:0058565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6507","termid":"PBO:0058565"}


id: FYPO:0004792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"reduced telomere-nuclear envelope distance during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004792"}


id: PBO:0068813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 50, pseudogene","termid":"PBO:0068813"}


id: PR:O13742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vph1 gene.","definition_xrefs":["UniProtKB:O13742","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.07c","synonyms":[{"name":"Spom972h-vph1","type":"exact"},{"name":"V-ATPase a subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar ATPase 91 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump a subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton translocating ATPase subunit a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13742"}


id: PBO:0059172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin protein zero like 3","termid":"PBO:0059172"}


id: PR:Q10264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pso2 gene.","definition_xrefs":["UniProtKB:Q10264","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair protein pso2/snm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.01c","synonyms":[{"name":"Spom972h-pso2","type":"exact"}],"termid":"PR:Q10264"}


id: GO:0015441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + beta-glucan(in) = ADP + phosphate + beta-glucan(out).","definition_xrefs":["RHEA:18453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"},{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type beta-glucan transporter activity","secondary_identifiers":["EC:7.5.2.3","MetaCyc:3.6.3.42-RXN"],"synonyms":[{"name":"ABC-type beta-glucan transporter","type":"related"},{"name":"ATP-dependent beta-glucan transporter activity","type":"related"},{"name":"ATPase-coupled beta-glucan transporter activity","type":"related"},{"name":"beta-glucan ABC transporter","type":"exact"},{"name":"beta-glucan-transporting ATPase activity","type":"related"}],"termid":"GO:0015441"}


id: FYPO:0004928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"fragmented DNA during vegetative growth","synonyms":[{"name":"DNA fragmentation during vegetative growth","type":"exact"},{"name":"fragmented DNA during mitotic cell cycle","type":"related"},{"name":"fragmented nucleus during vegetative growth","type":"related"}],"termid":"FYPO:0004928"}


id: GO:1990584
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of accessory proteins (cardiac troponin T, cardiac troponin I and cardiac troponin C) found associated with actin in cardiac muscle thin filaments; involved in calcium regulation important for muscle contraction.","definition_xrefs":["PMID:12840750","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"troponin complex","termid":"GO:0005861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cardiac Troponin complex","synonyms":[{"name":"cTnC:cTnI:cTnT","type":"related"}],"termid":"GO:1990584"}


id: MONDO:1010970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysautonomia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysautonomia, non-human animal","termid":"MONDO:1010229"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysautonomia, horse","secondary_identifiers":["OMIA:000312-9796"],"termid":"MONDO:1010970","xrefs":{"Monarch":{"xref_id":"1010970"}}}


id: GO:0050799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cocaine, an alkaloid obtained from the dried leaves of the shrub Erythroxylon coca. It is a cerebral stimulant and narcotic.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropane alkaloid biosynthetic process","termid":"GO:0009710"},{"relation_name":"is_a","term_name":"cocaine metabolic process","termid":"GO:0050783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cocaine biosynthetic process","synonyms":[{"name":"cocaine anabolism","type":"exact"},{"name":"cocaine biosynthesis","type":"exact"},{"name":"cocaine formation","type":"exact"},{"name":"cocaine synthesis","type":"exact"}],"termid":"GO:0050799"}


id: GO:0050548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-feruloyl-CoA + H2O = 4-hydroxy-3-methoxyphenyl-beta-hydroxypropionyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-feruloyl-CoA hydratase activity (obsolete GO:0050548)","synonyms":[{"name":"4-hydroxy-3-methoxyphenyl-beta-hydroxypropanoyl-CoA hydro-lyase (trans-feruloyl-CoA-forming)","type":"related"},{"name":"trans-feruloyl-CoA hydro-lyase activity","type":"related"}],"termid":"GO:0050548"}


id: PBO:0039183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 13","termid":"PBO:0039183"}


id: PBO:0059014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 1","termid":"PBO:0059014"}


id: FYPO:0002021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized throughout the cell cortex (rather than concentrated at the cell ends as in wild type cells).","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actin cortical patches during vegetative growth","termid":"FYPO:0003988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"dispersed actin cortical patch localization during vegetative growth","synonyms":[{"name":"delocalised actin cortical patches during vegetative growth","type":"exact"},{"name":"delocalized actin cortical patches during vegetative growth","type":"exact"},{"name":"depolarized actin cortical patch localization during vegetative growth","type":"exact"},{"name":"dispersed F-actin patch localization during vegetative growth","type":"exact"},{"name":"dispersed actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"dispersed actin cortical patch localization during mitotic cell cycle","type":"related"},{"name":"dispersed actin cortical patch location during vegetative growth","type":"related"},{"name":"dispersed actin patch localization during vegetative growth","type":"exact"}],"termid":"FYPO:0002021"}


id: MONDO:0020457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase deficiency","secondary_identifiers":["UMLS:C5543091","MEDGEN:1783871","OMIM:619199","Orphanet:99135","GARD:16897"],"termid":"MONDO:0020457","xrefs":{"Monarch":{"xref_id":"0020457"}}}


id: PBO:0047615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIBCD1 antisense RNA 1","termid":"PBO:0047615"}


id: GO:0009082
data:
  {"annotated_genes":["SJAG_03562","SJAG_00107","SJAG_04098","SJAG_03985","SJAG_03243","SJAG_04149","SJAG_00396","SJAG_06635","SJAG_02841","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103610,110745,113559,91024,108631,111407,104094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[113560,77296,59354,91025,80294,75181,103611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[80295,76454,77346,58687,64047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"branched-chain amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"branched chain family amino acid anabolism","type":"exact"},{"name":"branched chain family amino acid biosynthesis","type":"exact"},{"name":"branched chain family amino acid biosynthetic process","type":"exact"},{"name":"branched chain family amino acid formation","type":"exact"},{"name":"branched chain family amino acid synthesis","type":"exact"}],"termid":"GO:0009082","terms_by_termid":{"GO:0009098":null,"GO:0009099":null,"GO:1901705":null}}


id: GO:0003084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the force with which blood travels through the systemic arterial circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic arterial blood pressure","termid":"GO:0003084"}


id: FYPO:0001561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular citrulline level","synonyms":[{"name":"decreased cellular L-citrulline level","type":"exact"},{"name":"decreased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular citrulline level during vegetative growth","type":"exact"},{"name":"decreased citrulline accumulation","type":"related"},{"name":"reduced cellular citrulline level","type":"exact"}],"termid":"FYPO:0001561"}


id: PBO:0031360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_amphotericin_B","termid":"PBO:0031360"}


id: PBO:0049505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 12","termid":"PBO:0049505"}


id: GO:0035255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an ionotropic glutamate receptor. Ionotropic glutamate receptors bind glutamate and exert an effect through the regulation of ion channels.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate receptor binding","termid":"GO:0035254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ionotropic glutamate receptor binding","termid":"GO:0035255"}


id: MONDO:0019630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital ectropion uveae is a rare, genetic, non-syndromic developmental defect of the eye characterized by the presence of iris pigment epithelium on the anterior surface of the iris, anterior insertion of the iris, angle dysgenesis and progressive open-angle glaucoma (the latter may present in infancy or may develop later in life). Patients may manifest with headaches, ocular pain, photophobia, and redness, watering and/or swelling of the eye. It can often be associated with neurofibromatosis and less commonly with other ocular abnormalities.","definition_xrefs":["Orphanet:91491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iridogoniodysgenesis","termid":"MONDO:0011119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital ectropion uveae","secondary_identifiers":["UMLS:C1303012","ICD10CM:Q10.1","MEDGEN:724517","GARD:19169"],"termid":"MONDO:0019630","xrefs":{"Monarch":{"xref_id":"0019630"}}}


id: MONDO:0016177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","secondary_identifiers":["Orphanet:209007"],"termid":"MONDO:0016177","xrefs":{"Monarch":{"xref_id":"0016177"}}}


id: MONDO:0002529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising from the squamous cells of the epidermis. Skin squamous cell carcinoma is most commonly found on sun-exposed areas. The majority of the tumors are well-differentiated.","definition_xrefs":["NCIT:C4819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin carcinoma","termid":"MONDO:0002656"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"skin squamous cell carcinoma","secondary_identifiers":["MEDGEN:107512","UMLS:C0553723","DOID:3151","ONCOTREE:CSCC","SCTID:254651007"],"synonyms":[{"name":"CSCC","type":"related"},{"name":"cutaneous squamous cell carcinoma","type":"exact"},{"name":"epidermoid carcinoma of skin","type":"exact"},{"name":"epidermoid carcinoma of the skin","type":"exact"},{"name":"epidermoid skin carcinoma","type":"exact"},{"name":"skin squamous cell cancer","type":"exact"},{"name":"skin squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma - skin","type":"exact"},{"name":"squamous cell carcinoma of skin","type":"exact"},{"name":"squamous cell carcinoma of the skin","type":"exact"},{"name":"squamous cell skin carcinoma","type":"exact"},{"name":"zone of skin squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002529","xrefs":{"Monarch":{"xref_id":"0002529"}}}


id: PATO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is high relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased age","synonyms":[{"name":"high age","type":"exact"}],"termid":"PATO:0001764"}


id: PBO:0013003
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_email","termid":"PBO:0013003"}


id: GO:0052918
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62767],"is_not":false,"summary":null,"term":"GO:0052918"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->6))-alpha-D-Man-(1->6))-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl D-mannosyl phosphate = H+ + alpha-D-Man-(1->2)-alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-[alpha-D-Man-(1->2)-alpha-D-Man-(1->3)-(alpha-D-Man-(1->2)-alpha-D-Man-(1->6))-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + dolichyl phosphate.","definition_xrefs":["RHEA:29539","EC:2.4.1.261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-1,2-mannosyltransferase activity","termid":"GO:0000026"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R06261","MetaCyc:RXN-5469"],"termid":"GO:0052918","terms_by_termid":{"GO:0052918":null}}


id: GO:0060661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a submandibular salivary gland. This process begins with a thickening of the epithelium next to the tongue and ends when a bud linked to the oral surface is formed.","definition_xrefs":["PMID:17336109","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"submandibular salivary gland formation","termid":"GO:0060661"}


id: MONDO:0045047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoidosis that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurosarcoidosis","secondary_identifiers":["MEDGEN:97948","MESH:C535814","icd11.foundation:1479285656","SCTID:230193008","UMLS:C0393485"],"synonyms":[{"name":"nervous system sarcoidosis","type":"exact"},{"name":"neurosarcoidosis","type":"exact"},{"name":"sarcoidosis of nervous system","type":"exact"}],"termid":"MONDO:0045047","xrefs":{"Monarch":{"xref_id":"0045047"}}}


id: PBO:0084746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrially-encoded 50-kD subunit of Endo.SceI; dimeric site-specific endonuclease that introduces double-stranded breaks at a number of well-defined sites in mitochondrial DNA, inducing homologous recombination; has a 26-bp recognition sequence in ATP6","termid":"PBO:0084746"}


id: PBO:0040363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b","termid":"PBO:0040363"}


id: MONDO:0005324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Allergic rhinitis caused by outdoor allergens.","definition_xrefs":["NCIT:C92188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic rhinitis","termid":"MONDO:0011786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"seasonal allergic rhinitis","secondary_identifiers":["EFO:0003956","MEDGEN:42335","SCTID:367498001","UMLS:C0018621","MESH:D006255"],"synonyms":[{"name":"hay fever","type":"exact"},{"name":"seasonal allergic rhinitis","type":"exact"}],"termid":"MONDO:0005324","xrefs":{"Monarch":{"xref_id":"0005324"}}}


id: GO:0102214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: coenzyme A + ATP + an omega-hydroxy fatty acid = diphosphoric acid + AMP + a omega-hydroxyacyl-CoA.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete omega-hydroxy fatty acyl-CoA synthetase activity (obsolete GO:0102214)","termid":"GO:0102214"}


id: PBO:0108556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase (class I) H3-K9 specific complex subunit Clr6","termid":"PBO:0108556"}


id: PBO:0049626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 29","termid":"PBO:0049626"}


id: PBO:0028952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_cell_during_recovery_from_stationary_phase","termid":"PBO:0028952"}


id: PBO:0044230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain containing 1","termid":"PBO:0044230"}


id: PBO:0083737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity","termid":"PBO:0083737"}


id: MONDO:0014077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cobblestone lissencephaly without muscular or ocular involvement is a form of cobblestone lissencephaly characterized by a constellation of brain malformations which can either exist alone or in conjunction with minimal muscular and ocular abnormalities. The clinical features of the disease include severe developmental delay, increased head circumference, hydrocephalus and seizures.","definition_xrefs":["Orphanet:352682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cobblestone lissencephaly","termid":"MONDO:0018869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cobblestone lissencephaly without muscular or ocular involvement","secondary_identifiers":["GARD:17526","DOID:0112230","MEDGEN:767571","OMIM:615191","UMLS:C3554657"],"synonyms":[{"name":"LIS5","type":"related"},{"name":"cobblestone lissencephaly without muscular or eye involvement","type":"exact"},{"name":"cobblestone lissencephaly without muscular or ocular involvement","type":"exact"},{"name":"lissencephaly 5","type":"related"},{"name":"lissencephaly type 2 without muscular or eye involvement","type":"exact"},{"name":"lissencephaly type 2 without muscular or ocular involvement","type":"exact"},{"name":"lissencephaly type 5","type":"exact"}],"termid":"MONDO:0014077","xrefs":{"Monarch":{"xref_id":"0014077"}}}


id: GO:2000980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear receptor cell differentiation","synonyms":[{"name":"regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000980"}


id: GO:0110115
data:
  {"annotated_genes":["SJAG_04486","SJAG_01456","SJAG_04280","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98748,99320,103799,116300],"is_not":false,"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A megadalton-sized complex at the medial cortex organized as an oligomeric core of SAD family protein kinases involved in cell size-dependent localization and phosphorylation of Wee1 during interphase.","definition_xrefs":["GOC:vw","PMID:29514920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"},{"relation_name":"part_of","term_name":"medial cortical node","termid":"GO:0071341"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01456":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Cdr2 medial cortical node complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"interphase cortical node","type":"exact"},{"name":"interphase node","type":"exact"}],"termid":"GO:0110115","terms_by_termid":{"GO:0110115":null}}


id: FYPO:0002517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"},{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from defective checkpoint activation","type":"related"}],"termid":"FYPO:0002517"}


id: GO:0004484
data:
  {"annotated_genes":["SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75888],"is_not":false,"summary":null,"term":"GO:0004484"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + (5')pp-Pur-mRNA = diphosphate + G(5')ppp-Pur-mRNA; G(5')ppp-Pur-mRNA is mRNA containing a guanosine residue linked 5' through three phosphates to the 5' position of the terminal residue.","definition_xrefs":["EC:2.7.7.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"mRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9815529","RHEA:54592","Reactome:R-HSA-77081","MetaCyc:MRNA-GUANYLYLTRANSFERASE-RXN","Reactome:R-HSA-77083"],"synonyms":[{"name":"GTP--RNA guanylyltransferase activity","type":"related"},{"name":"GTP:mRNA guanylyltransferase activity","type":"exact"},{"name":"mRNA capping enzyme activity","type":"related"},{"name":"messenger RNA guanylyltransferase activity","type":"related"},{"name":"protein lambda2","type":"related"}],"termid":"GO:0004484","terms_by_termid":{"GO:0004484":null}}


