# terms

id: MONDO:0859211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hyperkinetic movements and dyskinesia","secondary_identifiers":["MEDGEN:1794248","UMLS:C5562038","OMIM:619651"],"termid":"MONDO:0859211","xrefs":{"Monarch":{"xref_id":"0859211"}}}


id: MONDO:0018679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"IgG4-related disease","termid":"MONDO:0017287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous plasmacytosis","secondary_identifiers":["MEDGEN:1672491","GARD:21888","icd11.foundation:1669369613","UMLS:C4736227","Orphanet:451602"],"termid":"MONDO:0018679","xrefs":{"Monarch":{"xref_id":"0018679"}}}


id: GO:0070670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-4","synonyms":[{"name":"response to IL-4","type":"exact"}],"termid":"GO:0070670"}


id: FYPO:0008105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a greater extent than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin mobility","termid":"FYPO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin mobility during stationary phase","termid":"FYPO:0008105"}


id: PBO:0113061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS protein complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; other complex members are Kae1p, Gon7p, Bud32p, and Cgi121p; ortholog of human LAGE3","termid":"PBO:0113061"}


id: PBO:0070996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 20","termid":"PBO:0070996"}


id: PBO:0050739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 1","termid":"PBO:0050739"}


id: PBO:0024819
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains PCB","termid":"PBO:0024819"}


id: PBO:0027857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_prophase_I","termid":"PBO:0027857"}


id: PBO:0112468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2, for APC Ubc11/UbcP4","termid":"PBO:0112468"}


id: PBO:0060039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 27","termid":"PBO:0060039"}


id: GO:0030659
data:
  {"annotated_genes":["SJAG_04822","SJAG_04609","SJAG_04391","SJAG_04023","SJAG_00314","SJAG_00557","SJAG_02482","SJAG_02160","SJAG_05344","SJAG_03250","SJAG_04024","SJAG_00339","SJAG_01508","SJAG_01025","SJAG_05207","SJAG_03783","SJAG_04565","SJAG_01112","SJAG_02100","SJAG_05210","SJAG_01939","SJAG_01242","SJAG_03385","SJAG_03153","SJAG_00379","SJAG_02539","SJAG_00638","SJAG_03892","SJAG_02349","SJAG_04569","SJAG_05345","SJAG_03347","SJAG_04474","SJAG_00299","SJAG_00900","SJAG_02429","SJAG_03907","SJAG_04513","SJAG_04517","SJAG_04644","SJAG_02177","SJAG_00192","SJAG_03511","SJAG_02234","SJAG_02453","SJAG_04070","SJAG_00284","SJAG_01981","SJAG_01236","SJAG_01633","SJAG_01167","SJAG_04002","SJAG_00108","SJAG_01379","SJAG_00416","SJAG_00104","SJAG_04349","SJAG_00906","SJAG_00800","SJAG_02587","SJAG_00072","SJAG_07012","SJAG_01809","SJAG_02282","SJAG_02805","SJAG_03558","SJAG_04936","SJAG_00301","SJAG_04912","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59362,97721],"is_not":false,"summary":null,"term":"GO:0030659"},{"annotations":[113300,62231,113088,78117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58326,74704,108645,78455],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[58810,65655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[74072,80115],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[89244,94522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[78397,80246,64397,93570,98776,78743,73877,107437,71249],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[98088,96382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"},{"annotations":[71719,76846,73398,78781,95843,75393,71689,76022,75162,77435],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[90915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[100035,80711,96228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[72939,60894,80606,102285,102297,78466,99011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010008"},{"annotations":[74242,101396,70789,76513,67615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"},{"annotations":[72672,88460],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[72531,71347,78807],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[71116,71436,70370,76100,76642,78066],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[92340,76509,99834,78805,88461,101398,97988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[62542,60522,119845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[99191,75603],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a cytoplasmic vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle membrane","termid":"GO:0012506"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":70,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00339":null,"SJAG_00379":null,"SJAG_00416":null,"SJAG_00557":null,"SJAG_00638":null,"SJAG_00800":null,"SJAG_00900":null,"SJAG_00906":null,"SJAG_01025":null,"SJAG_01112":null,"SJAG_01167":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01379":null,"SJAG_01508":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02160":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02429":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02587":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03511":null,"SJAG_03558":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05344":null,"SJAG_05345":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"termid":"GO:0030659","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030659":null,"GO:0030663":null,"GO:0030665":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: MOD:00833
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-glucosyl-asparagine.","definition_xrefs":["PubMed:1569073","RESID:AA0421","PubMed:3410849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"N4-hexosylated asparagine","termid":"MOD:01346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-glucosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(D-glucopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc)","type":"exact"},{"name":"CARBOHYD N-linked (Glc) asparagine","type":"exact"},{"name":"N4-(D-glucopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-asparagine-glucoside","type":"exact"},{"name":"N4-glucosyl-L-asparagine","type":"exact"},{"name":"N4-glucosylasparagine","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GlcAsn","type":"exact"}],"termid":"MOD:00833"}


id: PBO:0011101
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription repressed by copper","termid":"PBO:0011101"}


id: PBO:0045339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 11 pseudogene 1","termid":"PBO:0045339"}


id: PBO:0082362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy-specific protein required for autophagosome formation; forms a complex with Atg17p and Atg29p that localizes other proteins to the pre-autophagosomal structure; constitutively phosphorylated, and phosphorylation of residue S174 is required for function; high-copy suppressor of CIK1 deletion","termid":"PBO:0082362"}


id: PBO:0058904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12122","termid":"PBO:0058904"}


id: PBO:0040531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 1 pseudogene 1","termid":"PBO:0040531"}


id: PBO:0013461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl protein thioesterase/ dolichol pyrophosphate phosphatase fusion protein Pdf1","termid":"PBO:0013461"}


id: MONDO:0005538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the anus. It is usually caused by sexually transmitted infectious agents and/or inflammatory bowel disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"},{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"proctitis","secondary_identifiers":["MEDGEN:46113","ICD9:569.49","UMLS:C0033246","NCIT:C38011","MESH:D011349","SCTID:3951002","EFO:0005628","DOID:3127"],"synonyms":[{"name":"anus inflammation","type":"exact"},{"name":"inflammation of anus","type":"exact"},{"name":"rectitis","type":"exact"}],"termid":"MONDO:0005538","xrefs":{"Monarch":{"xref_id":"0005538"}}}


id: GO:0021548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pons over time, from its formation to the mature structure. The pons lies above the medulla and next to the cerebellum. The pons conveys information about movement from the cerebral hemisphere to the cerebellum.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"metencephalon development","termid":"GO:0022037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pons development","termid":"GO:0021548"}


id: MOD:00502
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three hydrogen atoms of a residue with three iodine atoms.","definition_xrefs":["Unimod:131","PubMed:15627961","OMSSA:116","PubMed:2026710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodinated residue","termid":"MOD:00755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triiodinated residue","synonyms":[{"name":"I3Res","type":"exact"},{"name":"Triiodo","type":"related"},{"name":"tri-Iodination","type":"related"},{"name":"triiodinationy","type":"exact"}],"termid":"MOD:00502"}


id: PBO:0073462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein C","termid":"PBO:0073462"}


id: PBO:0044220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 1","termid":"PBO:0044220"}


id: FYPO:0003562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is normal (i.e. indistinguishable from wild type). The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal horsetail nucleus morphology","synonyms":[{"name":"normal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0003562"}


id: GO:1902973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA ligation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic DNA replication DNA ligation (obsolete GO:1902973)","synonyms":[{"name":"DNA ligation involved in mitotic DNA replication","type":"exact"},{"name":"DNA ligation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902973"}


id: PBO:0090156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm3","termid":"PBO:0090156"}


id: GO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a uropod. A uropod is a membrane projection with related cytoskeletal components at the trailing edge of a migrating cell.","definition_xrefs":["GOC:pf","PMID:12714569","GOC:add","PMID:12787750","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to trailing edge","termid":"GO:0036051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to uropod","synonyms":[{"name":"protein localisation to uropod","type":"exact"}],"termid":"GO:0036052"}


id: PBO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase catalytic subunit","termid":"PBO:0003412"}


id: PBO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 27","termid":"PBO:0046528"}


id: GO:0098869
data:
  {"annotated_genes":["SJAG_00141","SJAG_00489","SJAG_04125","SJAG_03166","SJAG_02630","SJAG_05181","SJAG_01734","SJAG_04788","SJAG_00668","SJAG_04632","SJAG_03623","SJAG_03303","SJAG_03653","SJAG_04403","SJAG_01162","SJAG_04823","SJAG_04399","SJAG_02515","SJAG_01216","SJAG_01199","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57588,63727,65607,68474,69054,107113],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[118588,109148,105367,117666,100324,95530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[89322,69223,93479,99599,74668,65296,58084,89744,61027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular oxidant detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098869","terms_by_termid":{"GO:0019430":null,"GO:0061692":null,"GO:0098869":null}}


id: GO:0070091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of glucagon from secretory granules in the A (alpha) cells of the pancreas (islets of Langerhans).","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"glucagon secretion","termid":"GO:0070091"}


id: MONDO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pyle disease","termid":"MONDO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia","secondary_identifiers":["HP:0005871","SCTID:28681006","UMLS:C0265290","MEDGEN:120528"],"synonyms":[{"name":"metaphyseal chondrodysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia (disease)","type":"exact"}],"termid":"MONDO:0000138","xrefs":{"Monarch":{"xref_id":"0000138"}}}


id: PBO:0058452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5091","termid":"PBO:0058452"}


id: MONDO:0019713
data:
  {"annotated_genes":["SJAG_04995","SJAG_04092","SJAG_02200","SJAG_05019","SJAG_00796","SJAG_01067","SJAG_01852","SJAG_03484","SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86494,86493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"},{"annotations":[85899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007387"},{"annotations":[87381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010370"},{"annotations":[86039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012555"},{"annotations":[86497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013864"},{"annotations":[85917,85916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[87436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00796":null,"SJAG_01067":null,"SJAG_01831":null,"SJAG_01852":null,"SJAG_02200":null,"SJAG_03484":null,"SJAG_04092":null,"SJAG_04995":null,"SJAG_05019":null},"genotype_count":0,"is_obsolete":false,"name":"non-syndromic limb reduction defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19210","Orphanet:93457","MEDGEN:1842256","UMLS:C5680277"],"synonyms":[{"name":"isolated limb reduction defect","type":"related"},{"name":"non-syndromic limb hypoplasia","type":"exact"},{"name":"nonsyndromic limb reduction defect","type":"exact"}],"termid":"MONDO:0019713","terms_by_termid":{"MONDO:0007387":null,"MONDO:0009955":null,"MONDO:0010121":null,"MONDO:0010370":null,"MONDO:0012555":null,"MONDO:0013864":null,"MONDO:0013895":null},"xrefs":{"Monarch":{"xref_id":"0019713"}}}


id: GO:0071358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a type III interferon stimulus. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to type III interferon","termid":"GO:0034342"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to type III interferon","synonyms":[{"name":"cellular response to interferon-lambda","type":"narrow"},{"name":"cellular response to type III IFN","type":"exact"}],"termid":"GO:0071358"}


id: PBO:0039649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1G2 antisense RNA 1","termid":"PBO:0039649"}


id: SO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within the splice region (1-3 bases of the exon or 3-8 bases of the intron) of a non coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"},{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_splice_region_variant","synonyms":[{"name":"ANNOVAR:ncRNA_splicing","type":"narrow"}],"termid":"SO:0002088"}


id: MONDO:0033364
data:
  {"annotated_genes":["SJAG_02913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85786],"is_not":false,"summary":null,"term":"MONDO:0033364"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset in the first weeks or months of life of refractory seizures, profoundly impaired intellectual development, absent speech, spastic quadriplegia, and dyskinetic movements that has material basis in homozygous or compound heterozygous mutation in the PIGP gene on chromosome 21q22.","definition_xrefs":["DOID:0080283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027","MONDO:0005066","MONDO:0002525","MONDO:0024322","MONDO:0002320"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4539843","MEDGEN:1622363","OMIM:617599","GARD:16241"],"synonyms":[{"name":"DEE55","type":"exact"},{"name":"EIEE55","type":"exact"},{"name":"developmental and epileptic encephalopathy 55","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 55","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 14","type":"related"},{"name":"infantile epileptic encephalopathy 55","type":"related"}],"termid":"MONDO:0033364","terms_by_termid":{"MONDO:0033364":null},"xrefs":{"Monarch":{"xref_id":"0033364"}}}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: MONDO:0008249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hair-containing cyst or sinus, occurring chiefly in the coccygeal region.","definition_xrefs":["MESH:D010864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pilonidal sinus","secondary_identifiers":["OMIM:173000","HP:0010769","UMLS:C0031925","SCTID:47639008","MEDGEN:19314"],"synonyms":[{"name":"pilonidal sinus","type":"exact"},{"name":"pilonidal sinus (disease)","type":"exact"}],"termid":"MONDO:0008249","xrefs":{"Monarch":{"xref_id":"0008249"}}}


id: PBO:0038519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily F member 2 pseudogene 1","termid":"PBO:0038519"}


id: PBO:0083847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)","termid":"PBO:0083847"}


id: PR:Q9UTQ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1071.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTQ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine protein methyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.05","synonyms":[{"name":"Spom972h-SPAC1071.05","type":"exact"},{"name":"methyltransferase-like protein 18 homolog C1071.05 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTQ8"}


id: GO:0051592
data:
  {"annotated_genes":["SJAG_03799","SJAG_04454","SJAG_03631","SJAG_01233","SJAG_03879","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114980,98435,101313,113665,116427,110471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071277"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_02858":null,"SJAG_03631":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to Ca2+ ion","type":"exact"}],"termid":"GO:0051592","terms_by_termid":{"GO:0071277":null}}


id: PBO:0083862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Farnesyl pyrophosphate synthetase; has both dimethylallyltranstransferase and geranyltranstransferase activities; catalyzes the formation of C15 farnesyl pyrophosphate units for isoprenoid and sterol biosynthesis","termid":"PBO:0083862"}


id: GO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a leukocyte.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11911826","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"},{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte mediated cytotoxicity","synonyms":[{"name":"immune cell mediated cell death","type":"exact"},{"name":"immune cell mediated cell killing","type":"exact"},{"name":"immune cell mediated cytotoxicity","type":"exact"},{"name":"leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001909"}


id: GO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The autocatalytic formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; known to occur in the capsid of some bacteriophage, such as HK97, where it is thought to provide a mechanism for stabilizing the capsid.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete protein catenane formation via N6-(L-isoaspartyl)-L-lysine, autocatalytic (obsolete GO:0019937)","termid":"GO:0019937"}


id: GO:1902336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinal ganglion cell axon guidance.","definition_xrefs":["PMID:21658587","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinal ganglion cell axon guidance","termid":"GO:0090259"},{"relation_name":"is_a","term_name":"positive regulation of axon guidance","termid":"GO:1902669"},{"relation_name":"positively_regulates","term_name":"retinal ganglion cell axon guidance","termid":"GO:0031290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinal ganglion cell axon guidance","synonyms":[{"name":"activation of retinal ganglion cell axon guidance","type":"narrow"},{"name":"activation of retinal ganglion cell axon pathfinding","type":"narrow"},{"name":"positive regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"up-regulation of retinal ganglion cell axon pathfinding","type":"exact"},{"name":"upregulation of retinal ganglion cell axon guidance","type":"exact"},{"name":"upregulation of retinal ganglion cell axon pathfinding","type":"exact"}],"termid":"GO:1902336"}


id: MONDO:0971124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"perifoveal exudative vascular anomalous complex","secondary_identifiers":["Orphanet:674930","UMLS:C5925081","MEDGEN:1863553"],"termid":"MONDO:0971124","xrefs":{"Monarch":{"xref_id":"0971124"}}}


id: PATO:0001327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A symmetry quality inhering in a bearer by virtue of the bearer's being capable of division into symmetrical halves by only one longitudinal plane passing through the axis.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral symmetry","termid":"PATO:0001324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygomorphic","termid":"PATO:0001327"}


id: PBO:0043876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 3 like 4","termid":"PBO:0043876"}


id: PBO:0049160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 2","termid":"PBO:0049160"}


id: GO:0044538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a cell encompassing the cell cortex, the plasma membrane, and any external encapsulating structures of a host cell.","definition_xrefs":["GOC:jl","PMID:20463076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell periphery","termid":"GO:0044538"}


id: MONDO:0957203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 111","secondary_identifiers":["MEDGEN:1840204","OMIM:301107","UMLS:C5829568","DOID:0060929"],"termid":"MONDO:0957203","xrefs":{"Monarch":{"xref_id":"0957203"}}}


id: GO:0007283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa.","definition_xrefs":["GOC:jid","PMID:28073824","PMID:30990821","ISBN:9780878933846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatogenesis","secondary_identifiers":["Wikipedia:Spermatogenesis"],"synonyms":[{"name":"generation of spermatozoa","type":"exact"}],"termid":"GO:0007283"}


id: MOD:01057
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br and (81)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01057"}


id: MONDO:0005819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extrapulmonary tuberculosis involving the larynx. Signs and symptoms include hoarseness, cough, and odynophagia. The condition is rare.","definition_xrefs":["NCIT:C26895"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tuberculosis","termid":"MONDO:0018076"},{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"laryngitis","termid":"MONDO:0002647"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal tuberculosis","secondary_identifiers":["DOID:1583","ICD9:012.3","ICD9:012.31","MEDGEN:11945","SCTID:70341005","EFO:0007337","ICD9:012.32","MESH:D014387","ICD9:012.30","UMLS:C0041315"],"synonyms":[{"name":"larynx tuberculosis","type":"exact"},{"name":"tuberculous laryngitis","type":"exact"}],"termid":"MONDO:0005819","xrefs":{"Monarch":{"xref_id":"0005819"}}}


id: PBO:0063490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 1","termid":"PBO:0063490"}


id: PBO:0087223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold-type E3 ligase; required for cullin neddylation and ubiquitin ligase activation; contains a ubiquitin-binding domain (UBA) for ubiquitin and Nedd8 (Rub1p) interaction and a PONY domain involved in cullin binding and neddylation","termid":"PBO:0087223"}


id: PBO:0030545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level","termid":"PBO:0030545"}


id: GO:2001214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of vasculogenesis","termid":"GO:2001212"},{"relation_name":"positively_regulates","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculogenesis","synonyms":[{"name":"positive regulation of vascular morphogenesis","type":"exact"}],"termid":"GO:2001214"}


id: GO:0002417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell antigen processing and presentation which is initiated by uptake of antigen bound to the B cell receptor.","definition_xrefs":["PMID:15771591","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"},{"relation_name":"is_a","term_name":"antigen processing and presentation following receptor mediated endocytosis","termid":"GO:0002751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation mediated by B cell receptor uptake of antigen","synonyms":[{"name":"B lymphocyte antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"},{"name":"B-cell antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation mediated by B cell receptor uptake of antigen","type":"exact"}],"termid":"GO:0002417"}


id: GO:0005154
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an epidermal growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"epidermal growth factor receptor binding","secondary_identifiers":["GO:0008185"],"synonyms":[{"name":"EGF","type":"narrow"},{"name":"EGF receptor binding","type":"exact"},{"name":"EGF receptor ligand","type":"narrow"},{"name":"EGFR binding","type":"exact"},{"name":"TGF-alpha receptor binding","type":"exact"},{"name":"TGFalpha receptor binding","type":"exact"},{"name":"epidermal growth factor","type":"narrow"},{"name":"epidermal growth factor receptor ligand","type":"narrow"},{"name":"transforming growth factor alpha","type":"narrow"},{"name":"transforming growth factor alpha receptor binding","type":"exact"},{"name":"transforming growth factor alpha receptor ligand","type":"narrow"}],"termid":"GO:0005154"}


id: PBO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP1 antisense RNA 1","termid":"PBO:0080123"}


id: SO:0001856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence CCAAT, bound by a protein complex that represses transcription in response to low iron levels.","definition_xrefs":["PMID:16963626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT_motif","synonyms":[{"name":"CCAAT motif","type":"exact"}],"termid":"SO:0001856"}


id: PBO:0055436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2866","termid":"PBO:0055436"}


id: MONDO:0006758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycobacterium infections of the female reproductive tract (genitalia, female).","definition_xrefs":["MESH:D014384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female genital tuberculosis","secondary_identifiers":["MEDGEN:21724","UMLS:C0041311","SCTID:74181004","EFO:1000935","MedDRA:10061150"],"termid":"MONDO:0006758","xrefs":{"Monarch":{"xref_id":"0006758"}}}


id: PBO:0003861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA processing (predicted)","termid":"PBO:0003861"}


id: PBO:0049232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 5","termid":"PBO:0049232"}


id: GO:0141164
data:
  {"annotated_genes":["SJAG_00354","SJAG_01816","SJAG_01179","SJAG_04154","SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93616,101420,102411,111305,119030],"is_not":false,"summary":null,"term":"GO:0141164"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the mitochondrion, which are targeted for degradation.","definition_xrefs":["PMID:38280230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00354":null,"SJAG_00984":null,"SJAG_01179":null,"SJAG_01816":null,"SJAG_04154":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mitochondrial protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141164","terms_by_termid":{"GO:0141164":null}}


id: FYPO:0003895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of rotenone than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to rotenone","synonyms":[{"name":"resistance to rotenone during mitotic cell cycle","type":"related"},{"name":"resistance to rotenone during vegetative growth","type":"exact"},{"name":"resistant to rotenone","type":"exact"}],"termid":"FYPO:0003895"}


id: PBO:0003688
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.4","termid":"PBO:0003688"}


id: PBO:0066873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 173","termid":"PBO:0066873"}


id: PBO:0040614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAI1 associated protein 3","termid":"PBO:0040614"}


id: PBO:0070108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 22 pseudogene","termid":"PBO:0070108"}


id: GO:0110045
data:
  {"annotated_genes":["SJAG_03048","SJAG_02404","SJAG_02723","SJAG_00457","SJAG_04813","SJAG_01311","SJAG_03371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102679,104759,106134,106293,106966,109579,118664],"is_not":false,"summary":null,"term":"GO:0110045"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["GOC:al","PMID:17674143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"negatively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_01311":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03371":null,"SJAG_04813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110045","terms_by_termid":{"GO:0110045":null}}


id: GO:0034083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A polyketide synthase complex that consists of two identical ketosynthase polypeptides.","definition_xrefs":["PMID:12636085","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide synthase complex","termid":"GO:0034081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"type III polyketide synthase complex","synonyms":[{"name":"type III PKS","type":"exact"},{"name":"type III PKS complex","type":"exact"},{"name":"type III polyketide synthase","type":"exact"}],"termid":"GO:0034083"}


id: PBO:0079344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 28, pseudogene","termid":"PBO:0079344"}


id: GO:0061671
data:
  {"annotated_genes":["SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60657],"is_not":false,"summary":null,"term":"GO:0061671"}]},"cv_name":"cellular_component","definition":"A protein complex located at the mitochondrial ribosome tunnel exit that is involved in efficient translation and protein complex assembly.","definition_xrefs":["PMID:21670217","GOC:dph","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Cbp3p-Cbp6 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0061671","terms_by_termid":{"GO:0061671":null}}


id: FYPO:0002303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"monoseptate","termid":"FYPO:0001225"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"},{"relation_name":"is_a","term_name":"mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0007664"},{"relation_name":"output_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000641","FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0000337","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","synonyms":[{"name":"displaced nucleus with septum","type":"related"},{"name":"inviable mononucleate monoseptate cell during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division","type":"related"},{"name":"inviable with septation independent of mitosis","type":"related"},{"name":"inviable with septation without nuclear division","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell","type":"exact"}],"termid":"FYPO:0002303"}


id: MONDO:0009401
data:
  {"annotated_genes":["SJAG_02235"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87047],"is_not":false,"summary":null,"term":"MONDO:0009401"}]},"cv_name":"mondo","definition":"Hyperprolinemia type 2 is an autosomal recessive proline metabolism disorder due to pyroline-5-carboxylate dehydrogenase deficiency. The condition is often benign but clinical signs may include seizures, intellectual deficit and mild developmental delay.","definition_xrefs":["Orphanet:79101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperprolinemia","termid":"MONDO:0023419"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperprolinemia type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6710","DOID:0080543","MESH:C538385","SCTID:717181004","OMIM:239510","UMLS:C2931835","MedDRA:10058512","MedDRA:10058514","MEDGEN:419175"],"synonyms":[{"name":"1 alpha pyrroline-5-carboxylate dehydrogenase deficiency","type":"related"},{"name":"1-pyrroline-5-carboxylate dehydrogenase activity disease","type":"exact"},{"name":"1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"related"},{"name":"ALDH4A1 hyperprolinemia","type":"exact"},{"name":"HPII","type":"related"},{"name":"HYRPRO2","type":"related"},{"name":"delta-1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"exact"},{"name":"delta1-pyrroline-5-carboxylate dehydrogenase deficiency","type":"exact"},{"name":"disorder of 1-pyrroline-5-carboxylate dehydrogenase activity","type":"exact"},{"name":"hyperprolinemia caused by mutation in ALDH4A1","type":"exact"},{"name":"hyperprolinemia type 2","type":"exact"},{"name":"hyperprolinemia, type 2","type":"related"},{"name":"hyperprolinemia, type II","type":"related"},{"name":"type 2 hyperprolinemia","type":"related"}],"termid":"MONDO:0009401","terms_by_termid":{"MONDO:0009401":null},"xrefs":{"Monarch":{"xref_id":"0009401"}}}


id: GO:1903511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving orotic acid.","definition_xrefs":["GOC:dph","PMID:10727948","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"orotic acid metabolic process","synonyms":[{"name":"orotic acid metabolism","type":"exact"}],"termid":"GO:1903511"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: GO:0004802
data:
  {"annotated_genes":["SJAG_03934"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79888],"is_not":false,"summary":null,"term":"GO:0004802"}]},"cv_name":"molecular_function","definition":"Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor.","definition_xrefs":["EC:2.2.1.1","GOC:fmc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016744"],"is_obsolete":false,"name":"transketolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-163741","Reactome:R-HSA-71335","Reactome:R-HSA-163751","Reactome:R-HSA-71324"],"synonyms":[{"name":"fructose 6-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase activity","type":"narrow"},{"name":"glycoaldehyde transferase activity","type":"related"},{"name":"glycolaldehydetransferase activity","type":"related"},{"name":"sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase activity","type":"narrow"}],"termid":"GO:0004802","terms_by_termid":{"GO:0004802":null}}


id: PATO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000282 f1 fertility (obsolete PATO:0000282)","termid":"PATO:0000282"}


id: PBO:0073180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 2","termid":"PBO:0073180"}


id: PBO:0063799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain interacting protein","termid":"PBO:0063799"}


id: GO:0140334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a lipopolysaccharide is transported to the cell outer membrane.","definition_xrefs":["PMID:24639492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid localization","termid":"GO:0010876"},{"relation_name":"is_a","term_name":"localization within membrane","termid":"GO:0051668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipopolysaccharide localization to cell outer membrane","synonyms":[{"name":"LPS localization to cell outer membrane","type":"exact"}],"termid":"GO:0140334"}


id: GO:1900899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heptadecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"heptadecane metabolic process","termid":"GO:1900635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heptadecane metabolic process","synonyms":[{"name":"regulation of heptadecane metabolism","type":"exact"}],"termid":"GO:1900899"}


id: MONDO:0020523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of parathyroid gland adenoma that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"parathyroid gland adenoma","termid":"MONDO:0006890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial parathyroid adenoma","secondary_identifiers":["UMLS:C1840403","Orphanet:99877","icd11.foundation:55934726","MEDGEN:374460"],"synonyms":[{"name":"hereditary parathyroid gland adenoma","type":"exact"}],"termid":"MONDO:0020523","xrefs":{"Monarch":{"xref_id":"0020523"}}}


id: PBO:0057081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR181A2 host gene","termid":"PBO:0057081"}


id: PBO:0005781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit (predicted)","termid":"PBO:0005781"}


id: GO:0048781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cyanophore differentiation","termid":"GO:0048781"}


id: MONDO:0023601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A milder form of congenital adrenal hyperplasia characterized by decreased activity of an enzyme in the steroidogenic pathway, typically presenting later in life, that does not require life-long cortisol replacement.","definition_xrefs":["NCIT:C131442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"non-classic congenital adrenal hyperplasia","secondary_identifiers":["MESH:C537877","UMLS:C0342467","MEDGEN:90982"],"synonyms":[{"name":"LOCAH","type":"related"},{"name":"NCCAH","type":"related"},{"name":"attenuated congenital adrenal hyperplasia","type":"related"},{"name":"late-onset congenital adrenal hyperplasia","type":"exact"},{"name":"non classic congenital adrenal hyperplasia","type":"related"},{"name":"non-classic congenital adrenal hyperplasia","type":"exact"}],"termid":"MONDO:0023601","xrefs":{"Monarch":{"xref_id":"0023601"}}}


id: PBO:0072969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1C member 1","termid":"PBO:0072969"}


id: PBO:0045536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA2 upstream binding RNA","termid":"PBO:0045536"}


id: SO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that does not include the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric","termid":"SO:0001519"}


id: PR:O14332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-A2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific cyclin rem1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.17c","secondary_identifiers":["UniProtKB:O14332"],"synonyms":[{"name":"Spom972h-CCNA2","type":"exact"}],"termid":"PR:O14332"}


id: PBO:0045063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 3","termid":"PBO:0045063"}


id: PBO:0027763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027763"}


id: GO:0090006
data:
  {"annotated_genes":["SJAG_02104","SJAG_04457","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94226,110495],"is_not":false,"summary":null,"term":"GO:0090006"},{"annotations":[102708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of linear element assembly. Linear element assembly is the cell cycle process in which a proteinaceous scaffold, related to the synaptonemal complex, is assembled in association with S. pombe chromosomes during meiotic prophase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of homologous chromosome segregation","termid":"GO:0060629"},{"relation_name":"regulates","term_name":"linear element assembly","termid":"GO:0030999"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_03048":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of linear element assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090006","terms_by_termid":{"GO:0062123":null,"GO:0090006":null}}


id: FYPO:0002615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to pre-autophagosomal structure","synonyms":[{"name":"decreased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"decreased protein localization to PAS","type":"exact"},{"name":"decreased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"},{"name":"reduced protein localization to pre-autophagosomal structure","type":"exact"}],"termid":"FYPO:0002615"}


id: PBO:0082266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to endocytosis, protein transport, and cellular polarization; localizes primarily to the plasma membrane; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone; DNF2 has a paralog, DNF1, that arose from the whole genome duplication","termid":"PBO:0082266"}


id: PATO:0001446
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wholeness quality inhering in a bearer by virtue of the bearer's including all its components.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wholeness","termid":"PATO:0001442"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"whole","termid":"PATO:0001446"}


id: GO:0036064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-tethered, short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum) that is similar in structure to a centriole and derives from it. The cilium basal body is the site of assembly and remodeling of the cilium and serves as a nucleation site for axoneme growth. As well as anchoring the cilium, it is thought to provide a selective gateway regulating the entry of ciliary proteins and vesicles by intraflagellar transport.","definition_xrefs":["GOC:cilia","PMID:21750193","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"ciliary basal body","secondary_identifiers":["NIF_Subcellular:sao11978067","GO:0005932"],"synonyms":[{"name":"basal body","type":"broad"},{"name":"cilial basal body","type":"exact"},{"name":"cilium basal body","type":"exact"},{"name":"kinetosome","type":"exact"},{"name":"microtubule basal body","type":"exact"}],"termid":"GO:0036064"}


id: GO:0036067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors, which occur in the presence of light.","definition_xrefs":["PMID:12242396","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"light-dependent chlorophyll biosynthetic process","synonyms":[{"name":"light dependent chlorophyll biosynthetic process","type":"exact"},{"name":"light-dependent chlorophyll anabolism","type":"exact"},{"name":"light-dependent chlorophyll biosynthesis","type":"exact"},{"name":"light-dependent chlorophyll formation","type":"exact"},{"name":"light-dependent chlorophyll synthesis","type":"exact"}],"termid":"GO:0036067"}


id: GO:0080040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:18315545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"},{"relation_name":"positively_regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to phosphate starvation","termid":"GO:0080040"}


id: PBO:0061730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 3","termid":"PBO:0061730"}


id: PBO:0052239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 10","termid":"PBO:0052239"}


id: MONDO:0024619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process that affects the brain and/or spinal cord. Representative examples include encephalitis, poliomyelitis, arachnoiditis, and meningitis.","definition_xrefs":["NCIT:C27582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system infectious disorder","secondary_identifiers":["SCTID:128117002","EFO:1001456","UMLS:C4759823","MESH:D002494","ICD9:349.89","MEDGEN:1684837"],"synonyms":[{"name":"central nervous system infection","type":"related"},{"name":"central nervous system infectious disease","type":"exact"},{"name":"central nervous system infectious disorder","type":"exact"},{"name":"infections, central nervous system","type":"related"},{"name":"infectious disease of central nervous system","type":"exact"}],"termid":"MONDO:0024619","xrefs":{"Monarch":{"xref_id":"0024619"}}}


id: PBO:0074005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 6","termid":"PBO:0074005"}


id: GO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex having xanthine dehydrogenase activity.","definition_xrefs":["PMID:8224915","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"xanthine dehydrogenase complex","termid":"GO:0002197"}


id: PBO:0045399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 1","termid":"PBO:0045399"}


id: PBO:0069615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 892, pseudogene","termid":"PBO:0069615"}


id: MONDO:0013500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"immunodeficiency 51","secondary_identifiers":["OMIM:613953","MEDGEN:934770","GARD:15732","DOID:0111996","UMLS:C4310803"],"synonyms":[{"name":"CANDF5","type":"related"},{"name":"IMD51","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal recessive","type":"related"},{"name":"candidiasis, familial, 5","type":"related"},{"name":"candidiasis, familial, 5, formerly","type":"related"},{"name":"candidiasis, familial, type 5","type":"related"},{"name":"immunodeficiency 51","type":"exact"}],"termid":"MONDO:0013500","xrefs":{"Monarch":{"xref_id":"0013500"}}}


id: PBO:0002970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, CCR4-NOT complex subunit Rcd1","termid":"PBO:0002970"}


id: SO:0002351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site found in the chromosomes of less than five percent of the human population.","definition_xrefs":["PMID:16236432","PMID:17608616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rare_fragile_site","termid":"SO:0002351"}


id: FYPO:0005986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer linear elements than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"linear elements present in decreased numbers","synonyms":[{"name":"decreased linear element formation","type":"related"},{"name":"fewer linear elements present","type":"exact"},{"name":"linear elements present in reduced numbers","type":"exact"},{"name":"reduced number of linear elements","type":"exact"}],"termid":"FYPO:0005986"}


id: MONDO:0018505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of small intestine neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of small intestine (obsolete MONDO:0018505)","secondary_identifiers":["Orphanet:423793"],"synonyms":[{"name":"rare small intestine neoplasm","type":"exact"},{"name":"rare tumor of small bowel","type":"exact"}],"termid":"MONDO:0018505","xrefs":{"Monarch":{"xref_id":"0018505"}}}


id: PBO:0056958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 20a","termid":"PBO:0056958"}


id: PBO:0055571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3007","termid":"PBO:0055571"}


id: GO:0010830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotube differentiation","termid":"GO:0010830"}


id: GO:2001128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a methylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"},{"relation_name":"is_a","term_name":"methylamine metabolic process","termid":"GO:0030416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}


id: PBO:0068551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2, pseudogene","termid":"PBO:0068551"}


id: MOD:00754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a bromine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brominated residue","synonyms":[{"name":"BrRes","type":"exact"}],"termid":"MOD:00754"}


id: GO:0090243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to somitogenesis.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"somitogenesis","termid":"GO:0001756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in somitogenesis","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:0090243"}


id: MONDO:0700024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 19 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 disorder","termid":"MONDO:0700024","xrefs":{"Monarch":{"xref_id":"0700024"}}}


id: PBO:0084066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein, stimulates the GTPase activity of Sar1p; component of the Sec23p-Sec24p heterodimer of the COPII vesicle coat, involved in ER to Golgi transport; substrate of Ubp3/Bre5 complex; ubiquitylated by Ub-ligase Rsp5p; proteasome-mediated degradation of Sec23p is regulated by Cdc48p","termid":"PBO:0084066"}


id: MONDO:0009699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Action myoclonus-renal failure syndrome (AMRF) is a rare epilepsy syndrome characterized by progressive myoclonus epilepsy in association with primary glomerular disease. Patients present with neurologic symptoms (including tremor, action myoclonus, tonic-clonic seizures, later ataxia and dysarthria) that may precede, occur simultaneously or be followed by renal manifestations including proteinuria that progresses to nephrotic syndrome and end-stage renal disease. In some patients, sensorimotor peripheral neuropathy, sensorineural hearing loss and dilated cardiomyopathy are associated symptoms.","definition_xrefs":["Orphanet:163696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"action myoclonus-renal failure syndrome","secondary_identifiers":["DOID:0111444","UMLS:C0751779","MEDGEN:155629","GARD:17000","OMIM:254900","SCTID:764453009"],"synonyms":[{"name":"AMRF","type":"exact"},{"name":"EPM4","type":"exact"},{"name":"action myoclonus-renal failure syndrome","type":"exact"},{"name":"epilepsy, progressive myoclonic 4, with or without renal failure","type":"exact"},{"name":"epilepsy, progressive myoclonic, 4, with or without renal failure","type":"exact"},{"name":"myoclonus-nephropathy syndrome","type":"exact"},{"name":"progressive myoclonic epilepsy type 4","type":"exact"}],"termid":"MONDO:0009699","xrefs":{"Monarch":{"xref_id":"0009699"}}}


id: MONDO:0700119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal chromosome 18q deletion syndrome is a chromosome abnormality that occurs when there is a missing (deleted) copy of genetic material at the end of the long arm (q) of chromosome 18.","definition_xrefs":["GARD:0010865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 18q deletion syndrome","termid":"MONDO:0011147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal chromosome 18q deletion syndrome","secondary_identifiers":["MEDGEN:1382173","UMLS:C4329736"],"synonyms":[{"name":"distal 18q deletion","type":"exact"},{"name":"distal 18q deletion syndrome","type":"exact"},{"name":"distal 18q-","type":"exact"}],"termid":"MONDO:0700119","xrefs":{"Monarch":{"xref_id":"0700119"}}}


id: PBO:0082423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and short chain ester hydrolase; null mutant results in the accumulation of both triacylglycerol and fatty acids derived from neutral lipids and phospholipids as well as an increase in the quantity of lipid droplets; contains an alpha/beta hydrolase domain with a conserved GXSXG lipase motif; localizes to lipid droplets; GFP-fusion protein localizes to the cytoplasm and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082423"}


id: SO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element that is incorporated into a chromosome by a mechanism that requires reverse transcriptase.","direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon","secondary_identifiers":["http://en.wikipedia.org/wiki/Retrotransposon"],"synonyms":[{"name":"class I","type":"related"},{"name":"class I transposon","type":"exact"},{"name":"retrotransposon element","type":"exact"}],"termid":"SO:0000180"}


id: GO:0001181
data:
  {"annotated_genes":["SJAG_01744","SJAG_00692","SJAG_01712","SJAG_04766","SJAG_02813","SJAG_00421","SJAG_00202","SJAG_04083","SJAG_02747","SJAG_05331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64203,71764,72690,93518,95912,105600,108001,109466,110047,116748],"is_not":false,"summary":null,"term":"GO:0001181"}]},"cv_name":"molecular_function","definition":"A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase I. Factors required for RNA polymerase I transcription initiation include upstream activation factor (UAF), core factor (CF), TATA binding protein (TBP) and RRN3. In all species characterized, RNA polymerase I transcribes a large polycistronic transcript that is processed into several mature rRNAs (3 or 4 depending on the species), including the large subunit rRNA (28S in humans), the small subunit rRNA (18S in humans), as well as one or two additional smaller rRNAs (the 5.8S rRNA in humans). In most species, this large rRNA transcript is the sole product of RNA polymerase I. However there are rare exceptions, such as Trypanosoma brucei, where RNA polymerase I also transcribes certain mRNAs.","definition_xrefs":["PMID:25346433","PMID:11500378","PMID:28340337","PMID:17972917","PMID:28842442","GOC:txnOH-2018","PMID:31358304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor activity","termid":"GO:0140223"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00202":null,"SJAG_00421":null,"SJAG_00692":null,"SJAG_01712":null,"SJAG_01744":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_04083":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140223"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140223","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase I general transcription initiation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase I transcription general initiation factor activity","type":"exact"},{"name":"core RNA polymerase I binding transcription factor activity","type":"broad"},{"name":"general RNA polymerase I transcription factor activity","type":"exact"},{"name":"transcription factor activity, core RNA polymerase I binding","type":"broad"}],"termid":"GO:0001181","terms_by_termid":{"GO:0001181":null}}


id: GO:0033264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of limited hydrolysis of proteins of the neuroexocytosis apparatus, synaptobrevins, SNAP25 or syntaxin. No detected action on small molecule substrates.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bontoxilysin activity (obsolete GO:0033264)","synonyms":[{"name":"BoNT","type":"related"},{"name":"bontoxilysin activity","type":"exact"},{"name":"botulinum neurotoxin activity","type":"exact"}],"termid":"GO:0033264"}


id: FYPO:0001521
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutathione level during vegetative growth","synonyms":[{"name":"increased cellular GSH level during vegetative growth","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during vegetative growth","type":"exact"},{"name":"increased cellular glutathione level during mitotic cell cycle","type":"related"},{"name":"increased cellular reduced glutathione level during vegetative growth","type":"exact"},{"name":"increased glutathione accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0001521"}


id: SO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_conserved_region","synonyms":[{"name":"conserved non-coding element","type":"exact"},{"name":"conserved non-coding sequence","type":"exact"},{"name":"nc conserved region","type":"exact"},{"name":"noncoding conserved region","type":"exact"}],"termid":"SO:0000334"}


id: MOD:00441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a geranylgeranyl group.","definition_xrefs":["Unimod:48","DeltaMass:0","PubMed:15609361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"geranylgeranylated residue","synonyms":[{"name":"Geranyl-geranyl","type":"related"},{"name":"GeranylGeranyl","type":"related"},{"name":"Geranylgeranylation","type":"exact"},{"name":"GergerRes","type":"exact"}],"termid":"MOD:00441"}


id: PBO:0047850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p31.2)","termid":"PBO:0047850"}


id: GO:1902363
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902363","terms_by_termid":{"GO:1902543":null}}


id: GO:0102155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-sulfonatolactate + NAD = 3-sulfonatopyruvate(2-) + NADH + H+.","definition_xrefs":["EC:1.1.1.310","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"S-sulfolactate dehydrogenase activity","secondary_identifiers":["RHEA:28194","MetaCyc:RXN-11689"],"termid":"GO:0102155"}


id: MONDO:0021539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartoma (disease) that involves the cutaneous appendage.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hamartoma of skin appendage","secondary_identifiers":["MEDGEN:224909","UMLS:C1302712","SCTID:399906000","NCIT:C5562","ICD9:759.6"],"synonyms":[{"name":"cutaneous appendage hamartoma (disease)","type":"exact"},{"name":"skin appendage hamartoma","type":"exact"}],"termid":"MONDO:0021539","xrefs":{"Monarch":{"xref_id":"0021539"}}}


id: PBO:0057752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1911","termid":"PBO:0057752"}


id: PBO:0090592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane inorganic phosphate transmembrane transporter Pho843","termid":"PBO:0090592"}


id: MONDO:0800441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disease that includes congenital heart defects, abnormal cardiac conduction or myopathy. Congenital heart defects consists of any heart disease that is present at birth. Representative examples include atrial septal defect, ventricular septal defect, tetralogy of Fallot, and hypoplastic left heart syndrome.","definition_xrefs":["PMID:20456451","PMID:20659440","PMID:34214246","PMID:11714651","PMID:16896344","PMID:21110066","PMID:10587520","PMID:21165553","PMID:19948535","PMID:28991257","PMID:14607454","PMID:15810002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"NKX2.5-related congenital, conduction and myopathic heart disease","synonyms":[{"name":"NKX2-5-related congenital, conduction and myopathic heart disease","type":"exact"}],"termid":"MONDO:0800441","xrefs":{"Monarch":{"xref_id":"0800441"}}}


id: PBO:0076621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBCC domain containing 1","termid":"PBO:0076621"}


id: PBO:0072134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 11","termid":"PBO:0072134"}


id: FYPO:0004382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a single kinetochore becomes attached to both spindle poles, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000337","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"meroterically attached lagging mitotic chromosomes","synonyms":[{"name":"abnormal mitotic sister chromatid segregation, with merotelic kinetochore attachment and lagging mitotic chromosomes","type":"exact"},{"name":"lagging mitotic chromosomes with merotelic kinetochore attachment","type":"exact"},{"name":"lagging mitotic sister chromatids, with merotelic kinetochore attachment","type":"exact"},{"name":"merotelic kinetochore attachment with lagging mitotic chromosomes","type":"exact"},{"name":"meroterically attached lagging mitotic chromosomes during mitotic cell cycle","type":"related"},{"name":"meroterically attached lagging mitotic chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0004382"}


id: GO:0035990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a tendon cell. Tendon cell are elongated fibrocytes in which the cytoplasm is stretched between the collagen fibres of the tendon. Tendon cells have a central cell nucleus with a prominent nucleolus, a well-developed rough endoplasmic reticulum, and are responsible for synthesis and turnover of tendon fibres and ground substance.","definition_xrefs":["PMID:21412429","CL:0000388","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"tendon formation","termid":"GO:0035992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon cell differentiation","synonyms":[{"name":"muscle attachment cell differentiation","type":"exact"},{"name":"tenocyte differentiation","type":"related"}],"termid":"GO:0035990"}


id: GO:0000056
data:
  {"annotated_genes":["SJAG_01338","SJAG_01065","SJAG_02250","SJAG_01358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70219,70735,76523,80521],"is_not":false,"summary":null,"term":"GO:0000056"}]},"cv_name":"biological_process","definition":"The directed movement of a ribosomal small subunit from the nucleus into the cytoplasm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit export from nucleus","termid":"GO:0000054"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01065":null,"SJAG_01338":null,"SJAG_01358":null,"SJAG_02250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0042254","GO:0044085","GO:0006913","GO:0006810"],"is_obsolete":false,"name":"ribosomal small subunit export from nucleus","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0000058"],"synonyms":[{"name":"30S ribosomal subunit export from nucleus","type":"narrow"},{"name":"40S ribosomal subunit export from nucleus","type":"narrow"},{"name":"ribosomal small subunit export from cell nucleus","type":"exact"},{"name":"ribosomal small subunit export out of nucleus","type":"exact"},{"name":"ribosomal small subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"ribosomal small subunit-nucleus export","type":"exact"}],"termid":"GO:0000056","terms_by_termid":{"GO:0000056":null}}


id: PBO:0072784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold attachment factor B2","termid":"PBO:0072784"}


id: GO:1905803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to manganese ion","termid":"GO:1905802"},{"relation_name":"negatively_regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to manganese ion","synonyms":[{"name":"down regulation of cellular response to manganese","type":"exact"},{"name":"down regulation of cellular response to manganese ion","type":"exact"},{"name":"down-regulation of cellular response to manganese","type":"exact"},{"name":"down-regulation of cellular response to manganese ion","type":"exact"},{"name":"downregulation of cellular response to manganese","type":"exact"},{"name":"downregulation of cellular response to manganese ion","type":"exact"},{"name":"inhibition of cellular response to manganese","type":"narrow"},{"name":"inhibition of cellular response to manganese ion","type":"narrow"},{"name":"negative regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905803"}


id: PBO:0031023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_concentration_of_M-factor_in_growth_medium","termid":"PBO:0031023"}


id: PBO:0001359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, ICE2 family","termid":"PBO:0001359"}


id: FYPO:0007787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the meiotic cell cycle is arrested at the G2/MI phase transition. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:jh","PMID:28476936","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription during cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"increased transcription during abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"}],"termid":"FYPO:0007787"}


id: GO:0006816
data:
  {"annotated_genes":["SJAG_04096","SJAG_03631","SJAG_02877","SJAG_04668","SJAG_03399","SJAG_02532","SJAG_04471","SJAG_01090","SJAG_02322","SJAG_02019","SJAG_00296","SJAG_01400","SJAG_02440","SJAG_03850","SJAG_04698","SJAG_04551","SJAG_04757","SJAG_05229","SJAG_04028","SJAG_03873"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95964,97680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[92740,67331,74816,114739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[115864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[73925,109682,66127,69948,78709,95154,95787,72695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[91539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[91557,113668],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[102463],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The directed movement of calcium (Ca) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"calcium ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"calcium transport","type":"exact"},{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium:calcium exchange","type":"narrow"}],"termid":"GO:0006816","terms_by_termid":{"GO:0036444":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: FYPO:0005203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethionine. Cells stop growing (and may die) at a concentration of ethionine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ethionine","synonyms":[{"name":"hypersensitive to ethionine","type":"exact"},{"name":"sensitive to DL-ethionine","type":"related"},{"name":"sensitive to S-ethylhomocysteine","type":"exact"},{"name":"sensitive to ethionine during mitotic cell cycle","type":"related"},{"name":"sensitive to ethionine during vegetative growth","type":"exact"}],"termid":"FYPO:0005203"}


id: PBO:0056266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 2","termid":"PBO:0056266"}


id: PBO:0039975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4C","termid":"PBO:0039975"}


id: MONDO:0013763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CEP41 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with ocular defect","termid":"MONDO:0016364"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"Joubert syndrome 15","secondary_identifiers":["MEDGEN:482527","DOID:0110984","GARD:15806","OMIM:614464","UMLS:C3280897"],"synonyms":[{"name":"CEP41 Joubert syndrome","type":"exact"},{"name":"JBTS15","type":"exact"},{"name":"Joubert syndrome 12/15, digenic","type":"related"},{"name":"Joubert syndrome 15","type":"exact"},{"name":"Joubert syndrome 9/15, digenic","type":"related"},{"name":"Joubert syndrome caused by mutation in CEP41","type":"exact"},{"name":"Joubert syndrome type 15","type":"exact"}],"termid":"MONDO:0013763","xrefs":{"Monarch":{"xref_id":"0013763"}}}


id: SOFP:organism
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The name of the organism","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organism","termid":"SOFP:organism"}


id: MONDO:0007309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease type 1A (CMT1A) is a type ofinherited neurological disorder that affects the peripheral nerves. Affected individuals experience weakness and wasting (atrophy) of the muscles of the lower legs beginning in adolescence; later they experience hand weakness and sensory loss. CMT1A is caused byhaving an extra copy (a duplication) of the PMP22 gene. It is inherited in an autosomal dominant manner. Treatment for this condition may include physical therapy ; occupational therapy ; braces and other orthopedic devices; orthopedic surgery;and pain medications.","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 17","termid":"MONDO:0016950"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 1","termid":"MONDO:0019011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 1A","secondary_identifiers":["OMIM:118220","Orphanet:101081","DOID:0110148","GARD:1245","DECIPHER:29","NCIT:C75468","UMLS:C0270911","MEDGEN:75727"],"synonyms":[{"name":"CMT 1A","type":"related"},{"name":"CMT1A","type":"exact"},{"name":"Charcot Marie Tooth disease type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, with focally folded myelin sheaths, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease, demyelinating, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 1A","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 1A","type":"related"},{"name":"Charcot-Marie-Tooth syndrome type 1A","type":"exact"},{"name":"HMSN 1A","type":"related"},{"name":"HMSN1A","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease with focally folded myelin sheaths type 1A","type":"exact"},{"name":"hereditary motor and sensory neuropathy 1A","type":"exact"},{"name":"microduplication 17p12","type":"exact"}],"termid":"MONDO:0007309","xrefs":{"Monarch":{"xref_id":"0007309"}}}


id: PBO:0049727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 8","termid":"PBO:0049727"}


id: PBO:0056301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 pseudogene","termid":"PBO:0056301"}


id: GO:0052012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of chitin in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host cell wall chitin (obsolete GO:0052012)","synonyms":[{"name":"catabolism by organism of host cell wall chitin","type":"exact"}],"termid":"GO:0052012"}


id: GO:0009669
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sucrose(out) + monovalent cation(out) = sucrose(in) + monovalent cation(in).","definition_xrefs":["TC:2.A.2.4.1","TC:2.A.2.-.-","GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"sucrose transmembrane transporter activity","termid":"GO:0008515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"sucrose:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"sucrose permease activity","type":"related"},{"name":"sucrose:cation symporter activity","type":"broad"},{"name":"sucrose:monovalent cation symporter activity","type":"exact"}],"termid":"GO:0009669","terms_by_termid":{"GO:0008506":null}}


id: GO:0045742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"is_a","term_name":"positive regulation of ERBB signaling pathway","termid":"GO:1901186"},{"relation_name":"positively_regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of epidermal growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-8849469"],"synonyms":[{"name":"activation of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of EGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of EGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of EGFR signaling pathway","type":"exact"},{"name":"stimulation of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of epidermal growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045742"}


id: GO:0100070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates fatty acid biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fatty acid biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100070)","termid":"GO:0100070"}


id: GO:0060090
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activity","type":"broad"}],"termid":"GO:0060090","terms_by_termid":{"GO:0003712":null,"GO:0003713":null,"GO:0003714":null,"GO:0005078":null,"GO:0005483":null,"GO:0005484":null,"GO:0008093":null,"GO:0030159":null,"GO:0030674":null,"GO:0035591":null,"GO:0035615":null,"GO:0043495":null,"GO:0060090":null,"GO:0061649":null,"GO:0062239":null,"GO:0106006":null,"GO:0106166":null,"GO:0106260":null,"GO:0140312":null,"GO:0140443":null,"GO:0140449":null,"GO:0140463":null,"GO:0140473":null,"GO:0140474":null,"GO:0140475":null,"GO:0140483":null,"GO:0140506":null,"GO:0140517":null,"GO:0140566":null,"GO:0140580":null,"GO:0140585":null,"GO:0140693":null,"GO:0140767":null,"GO:0160134":null,"GO:0160214":null,"GO:0180014":null,"GO:1990247":null,"GO:1990644":null,"GO:1990756":null,"GO:1990889":null}}


id: PBO:0057431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-1","termid":"PBO:0057431"}


id: PBO:0079910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCRFS1 divergent transcript","termid":"PBO:0079910"}


id: GO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A microtubule-based process that occurs only during M phase of the cell cycle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete M phase specific microtubule process (obsolete GO:0000072)","synonyms":[{"name":"M phase specific microtubule process","type":"exact"},{"name":"M-phase specific microtubule process","type":"exact"}],"termid":"GO:0000072"}


id: GO:0042646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a plastid to which the DNA is confined.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoid","termid":"GO:0009295"},{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid stroma","termid":"GO:0009532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid nucleoid","termid":"GO:0042646"}


id: FYPO:0003942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"normal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003942"}


id: PBO:0053318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 52","termid":"PBO:0053318"}


id: PBO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KASH domain protein","termid":"PBO:0002065"}


id: FYPO:0000897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial fission, the division of a mitochondrion into two or more separate compartments, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000266","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitochondrial fission","synonyms":[{"name":"normal mitochondrial division","type":"exact"},{"name":"normal mitochondrial fission during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial fission during vegetative growth","type":"exact"},{"name":"normal mitochondrial proliferation","type":"related"}],"termid":"FYPO:0000897"}


id: GO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic catabolic process","synonyms":[{"name":"peptide antibiotic breakdown","type":"exact"},{"name":"peptide antibiotic catabolism","type":"exact"},{"name":"peptide antibiotic degradation","type":"exact"}],"termid":"GO:0030652"}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: PBO:0000441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5 (predicted)","termid":"PBO:0000441"}


id: MONDO:0006427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma characterized by the presence of malignant spindle-shaped melanocytes.","definition_xrefs":["NCIT:C4237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"},{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle cell melanoma","secondary_identifiers":["UMLS:C0334444","DOID:3162","ICDO:8772/3","EFO:1000546","MEDGEN:83147","SCTID:403923002"],"synonyms":[{"name":"desmoplastic melanoma","type":"related"},{"name":"malignant spindle cell melanoma","type":"exact"},{"name":"spindle cell malignant melanoma","type":"exact"},{"name":"spindle cell melanoma","type":"exact"},{"name":"spitzoid malignant melanoma","type":"exact"}],"termid":"MONDO:0006427","xrefs":{"Monarch":{"xref_id":"0006427"}}}


id: PBO:0025497
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic Trna thioUridilase","termid":"PBO:0025497"}


id: PR:O36029
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4F10.17 gene.","definition_xrefs":["UniProtKB:O36029","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F10.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.17","synonyms":[{"name":"Spom972h-SPAC4F10.17","type":"exact"}],"termid":"PR:O36029"}


id: MONDO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, progressive myoclonic, 12","secondary_identifiers":["MEDGEN:1778162","OMIM:619191","UMLS:C5543069"],"synonyms":[{"name":"EPM12","type":"exact"},{"name":"epilepsy, progressive myoclonic, 12","type":"exact"}],"termid":"MONDO:0030936","xrefs":{"Monarch":{"xref_id":"0030936"}}}


id: MONDO:1010059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroiditis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis, non-human animal","secondary_identifiers":["OMIA:001005"],"termid":"MONDO:1010059","xrefs":{"Monarch":{"xref_id":"1010059"}}}


id: PBO:0088655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K4 methyltransferase Set1","termid":"PBO:0088655"}


id: PBO:0038613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like","termid":"PBO:0038613"}


id: PBO:0081663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 585B","termid":"PBO:0081663"}


id: PBO:0063053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocase associated motor 16","termid":"PBO:0063053"}


id: PBO:0084034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored aspartyl protease; member of the yapsin family of proteases involved in cell wall growth and maintenance; shares functions with Yap3p and Kex2p; MKC7 has a paralog, YPS1, that arose from the whole genome duplication","termid":"PBO:0084034"}


id: PBO:0044906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DET1 partner of COP1 E3 ubiquitin ligase","termid":"PBO:0044906"}


id: PBO:0077811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2","termid":"PBO:0077811"}


id: MONDO:0009108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperdibasic aminoaciduria, type 1 is characterized by increased renal clearance of lysine, ornithine and arginine, in the presence of normal concentrations of cystine. Heterozygous individuals are asymptomatic but homozygotes display intellectual deficit. To date, 25 heterozygotes and one homozygote have been reported.","definition_xrefs":["Orphanet:1032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"hyperdibasic aminoaciduria type 1","secondary_identifiers":["MESH:C567132","OMIM:222690","UMLS:C2673736","icd11.foundation:1522058907","MEDGEN:435997","GARD:1854"],"synonyms":[{"name":"dibasic amino aciduria 1","type":"related"},{"name":"dibasic amino aciduria I","type":"related"},{"name":"dibasic amino aciduria type 1","type":"exact"},{"name":"dibasic aminoaciduria 1","type":"related"}],"termid":"MONDO:0009108","xrefs":{"Monarch":{"xref_id":"0009108"}}}


id: GO:0071216
data:
  {"annotated_genes":["SJAG_01837","SJAG_04332","SJAG_04183","SJAG_01805","SJAG_03048","SJAG_04140","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102698,90341,111511,94146,116976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[104474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[102709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[102710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[94882,102711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to biotic stress","type":"narrow"}],"termid":"GO:0071216","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: MONDO:0021148
data:
  {"annotated_genes":["SJAG_01419","SJAG_01156","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85398,87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A benign, precancerous, or malignant neoplasm that affects the female reproductive system. Representative examples include uterine corpus leiomyoma, endocervical polyp, ovarian carcinoma, cervical carcinoma, and endometrial carcinoma.","definition_xrefs":["NCIT:C3053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null},"genotype_count":0,"is_obsolete":false,"name":"female reproductive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D005833","MEDGEN:9004","UMLS:C0017416"],"synonyms":[{"name":"female reproductive organ neoplasm (disease)","type":"exact"},{"name":"female reproductive organ tumor","type":"exact"},{"name":"female reproductive organ tumour","type":"exact"},{"name":"female reproductive system neoplasm","type":"exact"},{"name":"female reproductive system neoplasm (disease)","type":"exact"},{"name":"female reproductive system tumor","type":"exact"},{"name":"female reproductive system tumour","type":"exact"},{"name":"gynecologic neoplasm","type":"exact"},{"name":"gynecologic tumor","type":"exact"},{"name":"gynecologic tumour","type":"exact"},{"name":"neoplasm of female reproductive organ","type":"exact"},{"name":"neoplasm of female reproductive system","type":"exact"},{"name":"neoplasm of the female reproductive system","type":"exact"},{"name":"tumor of female reproductive system","type":"exact"},{"name":"tumor of the female reproductive system","type":"exact"},{"name":"tumour of female reproductive system","type":"exact"},{"name":"tumour of the female reproductive system","type":"exact"}],"termid":"MONDO:0021148","terms_by_termid":{"MONDO:0011962":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0021148"}}}


id: PBO:0050782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1F","termid":"PBO:0050782"}


id: FYPO:0006207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament depolymerization, i.e. the removal of actin monomers from a filament, is decreased.","definition_xrefs":["PomBase:mah","PMID:16866873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of actin filament depolymerization","synonyms":[{"name":"decreased rate of actin filament depolymerisation","type":"exact"},{"name":"decreased rate of actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament depolymerization during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament depolymerization","type":"exact"}],"termid":"FYPO:0006207"}


id: PBO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 10","termid":"PBO:0072658"}


id: GO:0098949
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic endosome membrane (obsolete GO:0098949)","synonyms":[{"name":"intrinsic to postsynaptic endosome membrane","type":"narrow"}],"termid":"GO:0098949"}


id: PBO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA transporter (predicted)","termid":"PBO:0003709"}


id: MONDO:0004698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a intestine.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"intestine carcinoma in situ","secondary_identifiers":["ICD9:230.7","UMLS:C0685941","DOID:9024","MEDGEN:672856","SCTID:92617001"],"synonyms":[{"name":"carcinoma in situ of intestine","type":"exact"},{"name":"intestine in situ carcinoma","type":"exact"},{"name":"stage 0 intestine carcinoma","type":"exact"}],"termid":"MONDO:0004698","xrefs":{"Monarch":{"xref_id":"0004698"}}}


id: GO:0099163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling to or from a synapse, mediated by nitric oxide.","definition_xrefs":["PMID:19038221","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic signaling by nitric oxide","termid":"GO:0099163"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: PBO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tat binding protein 1(TBP-1)-interacting protein (TBPIP) homolog (predicted)","termid":"PBO:0000700"}


id: MONDO:0600002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease caused by certain viruses or bacteria that can damage the walls of tiny blood vessels, making them leak, and can hamper the blood's ability to clot and cause severe, life-threatening illness.","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic fever","secondary_identifiers":["NCIT:C36169"],"synonyms":[{"name":"haemorrhagic fever","type":"exact"}],"termid":"MONDO:0600002","xrefs":{"Monarch":{"xref_id":"0600002"}}}


id: MONDO:0011203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"campomelic dysplasia","termid":"MONDO:0007251"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pierre Robin sequence with pectus excavatum and rib and scapular anomalies","secondary_identifiers":["MESH:C535775","GARD:10090","MEDGEN:355549","UMLS:C1865783","OMIM:602196"],"synonyms":[{"name":"Pierre Robin sequence with pectus excavatum and rib and scapular anomalies","type":"exact"},{"name":"campomelic dysplasia, mild","type":"related"},{"name":"skeletal dysplasia related to campomelic dysplasia","type":"related"}],"termid":"MONDO:0011203","xrefs":{"Monarch":{"xref_id":"0011203"}}}


id: PBO:0086427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hexose transporter that is nearly identical to Hxt11p; has similarity to major facilitator superfamily (MFS) transporters, expression of HXT9 is regulated by transcription factors Pdr1p and Pdr3p","termid":"PBO:0086427"}


id: PBO:0053036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE1 antisense RNA 1","termid":"PBO:0053036"}


id: PBO:0034812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Ekc1","termid":"PBO:0034812"}


id: PBO:0067042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 60, pseudogene","termid":"PBO:0067042"}


id: PBO:0070771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 1","termid":"PBO:0070771"}


id: PBO:0083393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF CDC15/YAR019C","termid":"PBO:0083393"}


id: MONDO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alcohol-related neurodevelopmental disorder (obsolete MONDO:0000394)","termid":"MONDO:0000394","xrefs":{"Monarch":{"xref_id":"0000394"}}}


id: FYPO:0003718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tributyltin. Cells stop growing (and may die) at a concentration of tributyltin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tributyltin","synonyms":[{"name":"hypersensitive to tributyltin","type":"exact"},{"name":"sensitive to tributylstannane","type":"exact"},{"name":"sensitive to tributyltin during mitotic cell cycle","type":"related"},{"name":"sensitive to tributyltin during vegetative growth","type":"exact"}],"termid":"FYPO:0003718"}


id: GO:0071414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methotrexate stimulus. Methotrexate is 4-amino-10-methylformic acid, a folic acid analogue that is a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methotrexate","termid":"GO:0031427"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methotrexate","termid":"GO:0071414"}


id: MONDO:0007938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sex reversal in an individual associated with a 9p24.3 deletion.","definition_xrefs":["NCIT:C132270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 4","secondary_identifiers":["MESH:C567887","DOID:0111771","OMIM:154230","UMLS:C2752149","MEDGEN:416704","GARD:15083"],"synonyms":[{"name":"46,XY SEX reversal 4","type":"related"},{"name":"46,XY Sex reversal type 4","type":"exact"},{"name":"46,XY gonadal dysgenesis, partial or complete, with 9P24.3 deletion","type":"related"},{"name":"46,XY sex reversal 4","type":"exact"},{"name":"46XY sex reversal 4, Isolated cases","type":"exact"},{"name":"SRXY4","type":"related"},{"name":"chromosome 9P24.3 deletion syndrome","type":"related"}],"termid":"MONDO:0007938","xrefs":{"Monarch":{"xref_id":"0007938"}}}


id: GO:0044850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of ovulation cycle where the endometrium is shed if pregnancy does not occur.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstrual cycle","secondary_identifiers":["Wikipedia:Menstrual_cycle"],"termid":"GO:0044850"}


id: PBO:0004812
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.117","termid":"PBO:0004812"}


id: PBO:0050354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 57","termid":"PBO:0050354"}


id: GO:0010191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mucilage, a gelatinous substance secreted by plants.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage metabolic process","synonyms":[{"name":"mucilage metabolism","type":"exact"}],"termid":"GO:0010191"}


id: PBO:0086458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative metallo-dependent hydrolase superfamily protein; similar to AMP deaminases but lacks key catalytic residues and does not rescue purine nucleotide metabolic defect of quadruple aah1 ade8 amd1 his1 mutant; null mutant exhibits longer telomeres, altered Ty mobility, decreased resistance to rapamycin and wortmannin; induced in response to hydrostatic pressure; not an essential gene; YBR284W has a paralog, YJL070C, that arose from the whole genome duplication","termid":"PBO:0086458"}


id: PBO:0049952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIF1AP pseudogene 1","termid":"PBO:0049952"}


id: GO:0008173
data:
  {"annotated_genes":["SJAG_04736","SJAG_02024","SJAG_02042","SJAG_04034","SJAG_03901","SJAG_02350","SJAG_02821","SJAG_00255","SJAG_02281","SJAG_05334","SJAG_03554","SJAG_02817","SJAG_05693","SJAG_03016","SJAG_01269","SJAG_03289","SJAG_02386","SJAG_04993","SJAG_03877","SJAG_03713","SJAG_01314","SJAG_04680","SJAG_01958","SJAG_02417","SJAG_03332","SJAG_02637","SJAG_00325","SJAG_01375","SJAG_03367","SJAG_00499","SJAG_04181","SJAG_00886","SJAG_00943","SJAG_03773","SJAG_00722","SJAG_00559","SJAG_04735","SJAG_04453","SJAG_03008","SJAG_02099","SJAG_01261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113004],"is_not":false,"summary":null,"term":"GO:0008173"},{"annotations":[68698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052909"},{"annotations":[95526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052907"},{"annotations":[94268,90799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062152"},{"annotations":[72525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004482"},{"annotations":[110070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001734"},{"annotations":[108350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990276"},{"annotations":[75331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071164"},{"annotations":[77553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016433"},{"annotations":[98730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106142"},{"annotations":[59642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000179"},{"annotations":[79312,95951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009383"},{"annotations":[95238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070043"},{"annotations":[89969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[76002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070037"},{"annotations":[76281,75962,79107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[80051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070042"},{"annotations":[73678,110513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008649"},{"annotations":[109432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090486"},{"annotations":[72710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106335"},{"annotations":[112458,62047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160107"},{"annotations":[66074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106340"},{"annotations":[79495,110467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052735"},{"annotations":[71005,79831,106108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016428"},{"annotations":[63197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160102"},{"annotations":[61192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160104"},{"annotations":[67217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052906"},{"annotations":[71795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008176"},{"annotations":[58611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052905"},{"annotations":[67498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030697"},{"annotations":[60370,98180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106050"},{"annotations":[72621,95039,74049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008175"},{"annotations":[63644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141101"},{"annotations":[95527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"},{"relation_name":"is_a","term_name":"catalytic activity, acting on 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methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191784"],"termid":"GO:0008173","terms_by_termid":{"GO:0000179":null,"GO:0001734":null,"GO:0004482":null,"GO:0008173":null,"GO:0008175":null,"GO:0008176":null,"GO:0008649":null,"GO:0008650":null,"GO:0009383":null,"GO:0016428":null,"GO:0016433":null,"GO:0030697":null,"GO:0052735":null,"GO:0052905":null,"GO:0052906":null,"GO:0052907":null,"GO:0052909":null,"GO:0062152":null,"GO:0070037":null,"GO:0070039":null,"GO:0070042":null,"GO:0070043":null,"GO:0071164":null,"GO:0090486":null,"GO:0106050":null,"GO:0106142":null,"GO:0106335":null,"GO:0106340":null,"GO:0120048":null,"GO:0141101":null,"GO:0160102":null,"GO:0160104":null,"GO:0160107":null,"GO:1990276":null}}


id: MONDO:1012428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complement component 4 deficiency, non-human animal","termid":"MONDO:1011730"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 deficiency, domestic guinea pig","secondary_identifiers":["OMIA:001626-10141"],"synonyms":[{"name":"C4 deficiency, domestic guinea pig","type":"exact"}],"termid":"MONDO:1012428","xrefs":{"Monarch":{"xref_id":"1012428"}}}


id: PBO:0039602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 3","termid":"PBO:0039602"}


id: GO:1990870
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A polymer of proteins that form a fine fiber.","definition_xrefs":["PMID:12764608"],"gene_count":0,"genotype_count":0,"name":"obsolete protein fibril (obsolete GO:1990870)","termid":"GO:1990870"}


id: PR:Q10221
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng8 gene.","definition_xrefs":["UniProtKB:Q10221","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.14c","synonyms":[{"name":"Spom972h-rng8","type":"exact"}],"termid":"PR:Q10221"}


id: GO:0048702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neurocranium are generated and organized during the embryonic phase. The neurocranium is the portion of the vertebrate skull surrounding the brain.","definition_xrefs":["GOC:dsf","GOC:jid","PMID:16049113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic cranial skeleton morphogenesis","termid":"GO:0048701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic neurocranium morphogenesis","synonyms":[{"name":"embryonic braincase morphogenesis","type":"exact"},{"name":"embryonic chondrocranium morphogenesis","type":"exact"}],"termid":"GO:0048702"}


id: SO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_variant","termid":"SO:0001622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"5'UTR variant","type":"exact"},{"name":"5PRIME_UTR","type":"exact"},{"name":"ANNOVAR:UTR5","type":"related"},{"name":"Jannovar:5_prime_utr_variant","type":"exact"},{"name":"Seattleseq:5-prime-UTR","type":"exact"},{"name":"VAAST:5_prime_UTR_variant","type":"exact"},{"name":"VAAST:five_prime_UTR_variant","type":"exact"},{"name":"VEP:5_prime_UTR_variant","type":"exact"},{"name":"five prime UTR variant","type":"exact"},{"name":"snpEff:UTR_5_PRIME","type":"exact"},{"name":"untranslated-5","type":"exact"}],"termid":"SO:0001623"}


id: GO:0044739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism positively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of acid-sensing ion channel in another organism (obsolete GO:0044739)","synonyms":[{"name":"positive regulation of ASIC channel in other organism","type":"exact"},{"name":"positive regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044739"}


id: PBO:0057003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 96","termid":"PBO:0057003"}


id: GO:0034945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA + CoASH = 3-isopropylbut-3-enoyl-CoA + propanoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0987"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dimethyl-5-methylene-3-oxo-heptanoyl-CoA C-acetyltransferase activity (obsolete GO:0034945)","termid":"GO:0034945"}


id: GO:0043281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of a cysteine-type endopeptidase involved in apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0043281)","secondary_identifiers":["Reactome:R-HSA-205025"],"synonyms":[{"name":"regulation of caspase activation","type":"narrow"},{"name":"regulation of caspase activity","type":"broad"}],"termid":"GO:0043281"}


id: PBO:0083582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; transcription of both YCR013C and the overlapping essential gene PGK1 is reduced in a gcr1 null mutant","termid":"PBO:0083582"}


id: PBO:0028915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heavy_metal_stress","termid":"PBO:0028915"}


id: PBO:0011185
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0011185"}


id: PBO:0004884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1","termid":"PBO:0004884"}


id: PBO:0002702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin Fus1","termid":"PBO:0002702"}


id: GO:1903098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of the formation of nucleosomes containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24710126"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CENP-A containing nucleosome assembly (obsolete GO:1903098)","synonyms":[{"name":"down regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"down regulation of CENP-A deposition","type":"related"},{"name":"down regulation of CENP-A loading","type":"related"},{"name":"down regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"down regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"down regulation of centromere specific nucleosome exchange","type":"related"},{"name":"down regulation of centromere-specific histone exchange","type":"exact"},{"name":"down regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"down regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"down-regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"down-regulation of CENP-A deposition","type":"related"},{"name":"down-regulation of CENP-A loading","type":"related"},{"name":"down-regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"down-regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"down-regulation of centromere specific nucleosome exchange","type":"related"},{"name":"down-regulation of centromere-specific histone exchange","type":"exact"},{"name":"down-regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"down-regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"downregulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"downregulation of CENP-A deposition","type":"related"},{"name":"downregulation of CENP-A loading","type":"related"},{"name":"downregulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"downregulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"downregulation of centromere specific nucleosome exchange","type":"related"},{"name":"downregulation of centromere-specific histone exchange","type":"exact"},{"name":"downregulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"downregulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"inhibition of CENP-A containing nucleosome assembly at centromere","type":"narrow"},{"name":"inhibition of CENP-A deposition","type":"related"},{"name":"inhibition of CENP-A loading","type":"related"},{"name":"inhibition of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"inhibition of DNA replication-independent nucleosome assembly at centromere","type":"narrow"},{"name":"inhibition of centromere specific nucleosome exchange","type":"related"},{"name":"inhibition of centromere-specific histone exchange","type":"narrow"},{"name":"inhibition of centromere-specific nucleosome assembly","type":"narrow"},{"name":"inhibition of centromeric DNA replication-independent nucleosome assembly","type":"narrow"},{"name":"negative regulation of CENP-A deposition","type":"related"},{"name":"negative regulation of CENP-A loading","type":"related"},{"name":"negative regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"negative regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"negative regulation of centromere specific nucleosome exchange","type":"related"},{"name":"negative regulation of centromere-specific histone exchange","type":"exact"},{"name":"negative regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"negative regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:1903098"}


id: MONDO:0021366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the middle ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of middle ear","secondary_identifiers":["SCTID:127006003","UMLS:C0345617","ICD9:239.89","NCIT:C4412","MEDGEN:87509"],"synonyms":[{"name":"middle Ear neoplasm","type":"exact"},{"name":"middle Ear tumor","type":"exact"},{"name":"middle Ear tumour","type":"exact"},{"name":"middle ear neoplasm","type":"exact"},{"name":"middle ear neoplasm (disease)","type":"exact"},{"name":"middle ear tumor","type":"exact"},{"name":"middle ear tumour","type":"exact"},{"name":"neoplasm of middle ear","type":"exact"},{"name":"neoplasm of the middle Ear","type":"exact"},{"name":"tumor of middle Ear","type":"exact"},{"name":"tumor of middle ear","type":"exact"},{"name":"tumor of the middle Ear","type":"exact"},{"name":"tumour of middle Ear","type":"exact"},{"name":"tumour of middle ear","type":"exact"},{"name":"tumour of the middle Ear","type":"exact"}],"termid":"MONDO:0021366","xrefs":{"Monarch":{"xref_id":"0021366"}}}


id: PBO:0081260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 30","termid":"PBO:0081260"}


id: PBO:0030228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tacrolimus","termid":"PBO:0030228"}


id: MONDO:0015742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Periventricular leukomalacia (PVL) is a brain injury disorder characterized by the death of the white matter of the brain due to softening of the brain tissue. It can affect fetuses or newborns, and premature babies are at the greatest risk of the disorder. PVL is caused by a lack of oxygen or blood flow to thearea around the ventricles of the brain, which results in the death of brain tissue. Although babies with PVL generally have no apparent signs or symptoms of the disorder at delivery, they are at risk for motor disorders, cerebral palsy, delayed mental development, coordination problems, and vision and hearing impairments. There is no cure for PVL. Treatment is generally supportive. Prognosis is dependent on the extent of damage to the ventricles.","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomalacia","termid":"MONDO:0006741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periventricular leukomalacia","secondary_identifiers":["MEDGEN:6072","ICD9:742.8","EFO:1001101","NCIT:C99013","MedDRA:10052594","UMLS:C0023529","SCTID:230769007","ICD9:779.7","DOID:13088","MESH:D007969","Orphanet:171676"],"synonyms":[{"name":"PVL","type":"related"}],"termid":"MONDO:0015742","xrefs":{"Monarch":{"xref_id":"0015742"}}}


id: PBO:0076494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARS1 divergent transcript","termid":"PBO:0076494"}


id: FYPO:0005702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubule organizing centers is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to microtubule organizing center","synonyms":[{"name":"abnormal protein localisation to microtubule organizing centre","type":"exact"},{"name":"abnormal protein localization to microtubule organizing center during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to microtubule organizing center during vegetative growth","type":"exact"}],"termid":"FYPO:0005702"}


id: MONDO:0016287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenoid basal carcinoma of the cervix uteri (obsolete MONDO:0016287)","termid":"MONDO:0016287","xrefs":{"Monarch":{"xref_id":"0016287"}}}


id: PR:O13865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pan3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit pan3-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B1.04c","synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pan3","type":"exact"}],"termid":"PR:O13865"}


id: GO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + H2O = 1D-myo-inositol 1,2,3,4,6-pentakisphosphate + phosphate.","definition_xrefs":["RHEA:13001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"5-phytase activity","secondary_identifiers":["EC:3.1.3.72","MetaCyc:3.1.3.72-RXN"],"synonyms":[{"name":"myo-inositol-hexakisphosphate 5-phosphohydrolase activity","type":"related"}],"termid":"GO:0050533"}


id: MONDO:0032600
data:
  {"annotated_genes":["SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86581],"is_not":false,"summary":null,"term":"MONDO:0032600"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03982":null},"genotype_count":0,"is_obsolete":false,"name":"Snijders Blok-Campeau syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748701","MEDGEN:1648495","GARD:13806","OMIM:618205","Orphanet:599082"],"synonyms":[{"name":"CHD3-related developmental delay-speech delay-intellectual disability-abnormalities of vision-facial dysmorphism syndrome","type":"exact"},{"name":"SNIBCPS","type":"related"},{"name":"SNIJDERS BLOK-CAMPEAU SYNDROME","type":"related"},{"name":"intellectual developmental disorder with macrocephaly, speech delay, and dysmorphic facies","type":"exact"}],"termid":"MONDO:0032600","terms_by_termid":{"MONDO:0032600":null},"xrefs":{"Monarch":{"xref_id":"0032600"}}}


id: PBO:0080684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain, phosphoinositide interacting 1","termid":"PBO:0080684"}


id: MOD:01757
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01757"}


id: PBO:0087396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Strand exchange protein; forms helical filament with DNA that searches for homology; involved in recombinational repair of DNA DSBs during vegetative growth and meiosis; phosphorylation by Cdc28p in G2/M phase promotes DNA binding, strand invasion, and primer extension; L1 and L2 motifs of DNA binding site I have critical roles in ensuring DNA fidelity during meiotic recombination; RAD51 and RAD4 pathways confer resistance to benzo[a]pyrene dihydrodiol; homolog of Dmc1p and bacterial RecA","termid":"PBO:0087396"}


id: MONDO:0015145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurovascular malformation (obsolete MONDO:0015145)","secondary_identifiers":["Orphanet:102006"],"termid":"MONDO:0015145","xrefs":{"Monarch":{"xref_id":"0015145"}}}


id: GO:0045926
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of growth, the increase in size or mass of all or part of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"growth","termid":"GO:0040007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of growth","type":"exact"},{"name":"down-regulation of growth","type":"exact"},{"name":"downregulation of growth","type":"exact"},{"name":"inhibition of growth","type":"narrow"}],"termid":"GO:0045926","terms_by_termid":{"GO:0051517":null}}


id: PBO:0054510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1910","termid":"PBO:0054510"}


id: PR:Q9HDZ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dam1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.08c","synonyms":[{"name":"Spom972h-dam1","type":"exact"},{"name":"outer kinetochore protein dam1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDZ6"}


id: GO:0019321
data:
  {"annotated_genes":["SJAG_02010","SJAG_03958","SJAG_04660","SJAG_03174","SJAG_04276","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95354,96084,101503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[58628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[74879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006014"},{"annotations":[101504,95356,96085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[65966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042732"},{"annotations":[119322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_02010":null,"SJAG_03174":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pentose metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pentose metabolism","type":"exact"}],"termid":"GO:0019321","terms_by_termid":{"GO:0005998":null,"GO:0006014":null,"GO:0019303":null,"GO:0019568":null,"GO:0042732":null,"GO:0042843":null}}


id: MONDO:0002874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor that arises from the testis and is characterized by the presence of one histologic component. This category includes seminoma, teratoma, embryonal carcinoma, yolk sac tumor, and trophoblastic tumor.","definition_xrefs":["NCIT:C39915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular pure germ cell tumor","secondary_identifiers":["UMLS:C1514608","MEDGEN:308089","DOID:4087"],"synonyms":[{"name":"testicular Pure germ cell tumor","type":"exact"},{"name":"testicular Pure germ cell tumour","type":"exact"}],"termid":"MONDO:0002874","xrefs":{"Monarch":{"xref_id":"0002874"}}}


id: GO:0140641
data:
  {"annotated_genes":["SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99556,101761],"is_not":false,"summary":null,"term":"GO:0140641"}]},"cv_name":"biological_process","definition":"The spindle organization process in which the spindle is maintained at a constant length during mitotic metaphase.","definition_xrefs":["PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0000070","GO:0007049","GO:0008150","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"mitotic spindle formation (spindle phase two)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metaphase spindle stability","type":"exact"},{"name":"metaphase spindle stabilization","type":"exact"}],"termid":"GO:0140641","terms_by_termid":{"GO:0140641":null}}


id: PBO:0077869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 4","termid":"PBO:0077869"}


id: FYPO:0000385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type). Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal macroautophagy","synonyms":[{"name":"autophagy: normal","type":"broad"}],"termid":"FYPO:0000385"}


id: GO:1905579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ERBB3 signaling pathway.","definition_xrefs":["PMID:27353365","GOC:TermGenie","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ERBB signaling pathway","termid":"GO:1901185"},{"relation_name":"is_a","term_name":"regulation of ERBB3 signaling pathway","termid":"GO:1905578"},{"relation_name":"negatively_regulates","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERBB3 signaling pathway","synonyms":[{"name":"down regulation of ERBB3 signaling pathway","type":"exact"},{"name":"down regulation of ERBB3 signalling pathway","type":"exact"},{"name":"down regulation of HER3 signaling pathway","type":"exact"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"},{"name":"down-regulation of ERBB3 signaling pathway","type":"exact"},{"name":"down-regulation of ERBB3 signalling pathway","type":"exact"},{"name":"down-regulation of HER3 signaling pathway","type":"exact"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"},{"name":"downregulation of ERBB3 signaling pathway","type":"exact"},{"name":"downregulation of ERBB3 signalling pathway","type":"exact"},{"name":"downregulation of HER3 signaling pathway","type":"exact"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"},{"name":"inhibition of ERBB3 signaling pathway","type":"narrow"},{"name":"inhibition of ERBB3 signalling pathway","type":"narrow"},{"name":"inhibition of HER3 signaling pathway","type":"narrow"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"narrow"},{"name":"negative regulation of ERBB3 signalling pathway","type":"exact"},{"name":"negative regulation of HER3 signaling pathway","type":"exact"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:1905579"}


id: MONDO:0008915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by the association of dilated cardiomyopathy and hypergonadotropic hypogonadism (DCM-HH).","definition_xrefs":["Orphanet:2229"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy-hypergonadotropic hypogonadism syndrome","secondary_identifiers":["UMLS:C0796031","DOID:0111584","NCIT:C174217","MEDGEN:162901","OMIM:212112","GARD:3373","SCTID:719451006"],"synonyms":[{"name":"Malouf syndrome","type":"exact"},{"name":"Najjar syndrome","type":"exact"},{"name":"cardiogenital syndrome","type":"exact"},{"name":"cardiomyopathy with primary testicular failure","type":"related"},{"name":"cardiomyopathy, congestive, with hypergonadotropic hypogonadism","type":"related"},{"name":"cardiomyopathy, dilated, with hypergonadotropic hypogonadism","type":"related"},{"name":"cardiomyopathy, dilated, with premature ovarian failure","type":"related"},{"name":"dilated cardiomyopathy with hypergonadotropic hypogonadism","type":"related"},{"name":"genital anomaly with cardiomyopathy","type":"related"}],"termid":"MONDO:0008915","xrefs":{"Monarch":{"xref_id":"0008915"}}}


id: PBO:0039891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 45","termid":"PBO:0039891"}


id: GO:0097160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a polychlorinated biphenyl (PCB), a biphenyl compound containing between 2 and 10 chlorine atoms attached to the two benzene rings.","definition_xrefs":["PMID:7583672","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polychlorinated biphenyl binding","synonyms":[{"name":"PCB binding","type":"exact"},{"name":"polychlorobiphenyl binding","type":"exact"}],"termid":"GO:0097160"}


id: PBO:0081561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 485","termid":"PBO:0081561"}


id: GO:0106378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-dATP + H2O = 2-hydroxy-dAMP + H+ + diphosphate.","definition_xrefs":["PMID:11139615","RHEA:31583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0047429","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-dATP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-2395818"],"termid":"GO:0106378"}


id: GO:0050142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6 reduced flavodoxin + 6 H+ + N2 + n ATP = 6 oxidized flavodoxin + 2 NH3 + n ADP + n phosphate.","definition_xrefs":["EC:1.19.6.1","MetaCyc:NITROGENASE-FLAVODOXIN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on reduced flavodoxin as donor, dinitrogen as acceptor","termid":"GO:0016738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nitrogenase (flavodoxin) activity","secondary_identifiers":["RHEA:15645"],"synonyms":[{"name":"reduced flavodoxin:dinitrogen oxidoreductase (ATP-hydrolysing)","type":"related"}],"termid":"GO:0050142"}


id: GO:0061498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the mitotic spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate layer of spindle pole body","termid":"GO:0005821"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005816"],"is_obsolete":false,"name":"intermediate layer of mitotic spindle pole body","termid":"GO:0061498"}


id: PBO:0046172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK1","termid":"PBO:0046172"}


id: SO:0001636
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 2KB 5' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upstream_gene_variant","termid":"SO:0001631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2KB_upstream_variant","synonyms":[{"name":"2KB upstream variant","type":"exact"},{"name":"near-gene-5","type":"exact"}],"termid":"SO:0001636"}


id: PBO:0060930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 1","termid":"PBO:0060930"}


id: PBO:0080795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 2","termid":"PBO:0080795"}


id: FYPO:0007954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule depolymerization, i.e. the removal of tubulin dimers from a microtubule, is abnormal.","definition_xrefs":["PomBase:val","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal rate of microtubule depolymerization during vegetative growth","termid":"FYPO:0007954"}


id: MONDO:1011816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoproliferative disease, non-human animal","secondary_identifiers":["OMIA:001409"],"termid":"MONDO:1011816","xrefs":{"Monarch":{"xref_id":"1011816"}}}


id: PBO:0069604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 881, pseudogene","termid":"PBO:0069604"}


id: MONDO:0014728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the CARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 27","secondary_identifiers":["OMIM:616672","UMLS:C5567608","GARD:17856","DOID:0111489","Orphanet:477774","MEDGEN:1799031"],"synonyms":[{"name":"CARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"COXPD27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 27","type":"exact"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in CARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 27","type":"exact"}],"termid":"MONDO:0014728","xrefs":{"Monarch":{"xref_id":"0014728"}}}


id: GO:0015128
data:
  {"annotated_genes":["SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92834],"is_not":false,"summary":null,"term":"GO:0015128"}]},"cv_name":"molecular_function","definition":"Enables the transfer of gluconate from one side of a membrane to the other. Gluconate is the aldonic acid derived from glucose.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"gluconate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"}],"termid":"GO:0015128","terms_by_termid":{"GO:0015128":null}}


id: MONDO:0004052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the transitional zone at the junction of the rectum and anus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma of rectum","termid":"MONDO:0018515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectal cloacogenic carcinoma","secondary_identifiers":["UMLS:C1333074","DOID:6959","MEDGEN:234156","NCIT:C5555"],"synonyms":[{"name":"cloacogenic carcinoma of rectum","type":"exact"},{"name":"cloacogenic carcinoma of the rectum","type":"exact"},{"name":"rectal cloacogenic carcinoma","type":"exact"},{"name":"rectal transition zone carcinoma","type":"exact"},{"name":"rectal transitional zone carcinoma","type":"exact"},{"name":"transition zone carcinoma of rectum","type":"exact"},{"name":"transition zone carcinoma of the rectum","type":"exact"},{"name":"transitional zone carcinoma of rectum","type":"exact"},{"name":"transitional zone carcinoma of the rectum","type":"exact"}],"termid":"MONDO:0004052","xrefs":{"Monarch":{"xref_id":"0004052"}}}


id: MOD:00015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-glutamic acid.","definition_xrefs":["PubMed:9326660","ChEBI:29972","DeltaMass:0","RESID:AA0006","PubMed:4922541","PubMed:957425","PubMed:6692818","PubMed:1881881","PubMed:4565668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamic acid residue","synonyms":[{"name":"(2S)-2-aminopentanedioic acid","type":"exact"},{"name":"1-aminopropane-1,3-dicarboxylic acid","type":"exact"},{"name":"2-aminoglutaric acid","type":"exact"},{"name":"2-azanylpentanedioic acid","type":"exact"},{"name":"Glu","type":"exact"},{"name":"L-glutamic acid","type":"exact"},{"name":"alpha-aminoglutaric acid","type":"exact"},{"name":"glutaminic acid","type":"exact"}],"termid":"MOD:00015"}


id: MOD:00753
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a chlorine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorinated residue","synonyms":[{"name":"ClRes","type":"exact"}],"termid":"MOD:00753"}


id: GO:0034338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carboxylic ester + H2O = an alcohol + a carboxylic anion, where the carboxylic chain has 8 or fewer carbon atoms.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"short-chain carboxylesterase activity","synonyms":[{"name":"butyrate esterase activity","type":"narrow"},{"name":"butyryl esterase activity","type":"narrow"},{"name":"methylbutyrase activity","type":"narrow"},{"name":"methylbutyrate esterase activity","type":"narrow"},{"name":"monobutyrase activity","type":"narrow"},{"name":"propionyl esterase activity","type":"narrow"},{"name":"short-chain esterase activity","type":"broad"}],"termid":"GO:0034338"}


id: _global:during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"during","secondary_identifiers":["GOREL:0000002"],"termid":"_global:during"}


id: GO:1900846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of naphtho-gamma-pyrone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"naphtho-gamma-pyrone biosynthetic process","termid":"GO:1900787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of naphtho-gamma-pyrone biosynthetic process","synonyms":[{"name":"regulation of naphtho-gamma-pyrone anabolism","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone biosynthesis","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone formation","type":"exact"},{"name":"regulation of naphtho-gamma-pyrone synthesis","type":"exact"},{"name":"regulation of naphtho-gamma-pyrones anabolism","type":"related"},{"name":"regulation of naphtho-gamma-pyrones biosynthesis","type":"related"},{"name":"regulation of naphtho-gamma-pyrones biosynthetic process","type":"related"},{"name":"regulation of naphtho-gamma-pyrones formation","type":"related"},{"name":"regulation of naphtho-gamma-pyrones synthesis","type":"related"}],"termid":"GO:1900846"}


id: PBO:0047510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 2","termid":"PBO:0047510"}


id: PBO:0066201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 2","termid":"PBO:0066201"}


id: GO:0034313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a diol, any alcohol containing two hydroxyl groups attached to saturated carbon atoms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diol metabolic process","termid":"GO:0034311"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diol catabolic process","synonyms":[{"name":"dihydric alcohol catabolic process","type":"exact"},{"name":"diol breakdown","type":"exact"},{"name":"diol catabolism","type":"exact"},{"name":"diol degradation","type":"exact"}],"termid":"GO:0034313"}


id: MONDO:0015066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low or intermediate grade tumor with neuroendocrine differentiation that arises from the appendix.","definition_xrefs":["NCIT:C96422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine tumor of the colon, well differentiated, low or intermediate grade tumor","termid":"MONDO:0015067"},{"relation_name":"is_a","term_name":"epithelial tumor of the appendix","termid":"MONDO:0018511"},{"relation_name":"is_a","term_name":"appendix neuroendocrine neoplasm","termid":"MONDO:0024501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neuroendocrine tumor of the appendix, well differentiated, low or intermediate grade","secondary_identifiers":["SCTID:725167001","icd11.foundation:1590340268","UMLS:C3272767","MEDGEN:474400","GARD:19754","ONCOTREE:AWDNET","Orphanet:100079"],"synonyms":[{"name":"NEN of appendix","type":"exact"},{"name":"appendiceal NEN","type":"exact"},{"name":"appendiceal neuroendocrine neoplasm","type":"exact"},{"name":"appendiceal neuroendocrine tumor","type":"exact"},{"name":"appendiceal neuroendocrine tumour","type":"exact"},{"name":"appendix NET","type":"exact"},{"name":"appendix neuroendocrine tumor","type":"exact"},{"name":"appendix neuroendocrine tumour","type":"exact"},{"name":"appendix well differentiated endocrine tumor","type":"exact"},{"name":"appendix well differentiated endocrine tumor/carcinoma","type":"exact"},{"name":"appendix well differentiated endocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of appendix","type":"related"},{"name":"well-differentiated neuroendocrine tumor of the appendix","type":"related"},{"name":"well-differentiated neuroendocrine tumour of the appendix","type":"related"}],"termid":"MONDO:0015066","xrefs":{"Monarch":{"xref_id":"0015066"}}}


id: MONDO:0010717
data:
  {"annotated_genes":["SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86792],"is_not":false,"summary":null,"term":"MONDO:0010717"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E1-alpha deficiency is the most frequent form of pyruvate dehydrogenase deficiency (PDHD) characterized by variable lactic acidosis, impaired psychomotor development, hypotonia and neurological dysfunction.","definition_xrefs":["Orphanet:79243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0037792","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"pyruvate dehydrogenase E1-alpha deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:312170","SCTID:124593001","UMLS:C1839413","GARD:4620","MEDGEN:326486","ICD9:277.6","MESH:C564071"],"synonyms":[{"name":"PDH deficiency","type":"related"},{"name":"PDHAD","type":"exact"},{"name":"ataxia with lactic acidosis 1","type":"related"},{"name":"ataxia, intermittent, with abnormal pyruvate metabolism","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase deficiency","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase, or decarboxylase, deficiency","type":"related"},{"name":"lactic acidemia, thiamine-responsive","type":"related"},{"name":"pyruvate decarboxylase deficiency","type":"broad"},{"name":"pyruvate dehydrogenase Complex deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-ALPHA deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex E1 component subunit alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase e1-alpha deficiency, X-linked dominant","type":"exact"}],"termid":"MONDO:0010717","terms_by_termid":{"MONDO:0010717":null},"xrefs":{"Monarch":{"xref_id":"0010717"}}}


id: PBO:0084897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translation initiation factor 3 (IF3, mIF3); evolutionarily conserved; interacts with mitochondrial ribosomal small subunit; binds to E. coli ribosomes in vitro; null mutant displays severe respiratory growth defect and elevated frequency of mitochondrial genome loss","termid":"PBO:0084897"}


id: PBO:0064275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H1","termid":"PBO:0064275"}


id: PBO:0039357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenin X-linked","termid":"PBO:0039357"}


id: PBO:0090327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSU-rRNA maturation protein Tsr3","termid":"PBO:0090327"}


id: MONDO:0009153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"isolated ectopia lentis","termid":"MONDO:0015998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectopia lentis et pupillae","secondary_identifiers":["SCTID:419237004","UMLS:C1644196","MEDGEN:301316","DOID:0111648","GARD:15164","MESH:C563268","OMIM:225200"],"synonyms":[{"name":"ectopia lentis et pupillae","type":"exact"},{"name":"ectopia lentis with ectopia of pupil","type":"related"}],"termid":"MONDO:0009153","xrefs":{"Monarch":{"xref_id":"0009153"}}}


id: GO:1902886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of proteasome-activating ATPase activity.","definition_xrefs":["PMID:23995839","GOC:di","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of proteasome-activating ATPase activity (obsolete GO:1902886)","synonyms":[{"name":"down regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down regulation of proteasomal ATPase activity","type":"exact"},{"name":"down regulation of proteasome channel gating activity","type":"narrow"},{"name":"down regulation of proteasome channel opening activity","type":"narrow"},{"name":"down regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"down-regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"down-regulation of proteasomal ATPase activity","type":"exact"},{"name":"down-regulation of proteasome channel gating activity","type":"narrow"},{"name":"down-regulation of proteasome channel opening activity","type":"narrow"},{"name":"down-regulation of proteasome-activating ATPase activity","type":"exact"},{"name":"downregulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"downregulation of proteasomal ATPase activity","type":"exact"},{"name":"downregulation of proteasome channel gating activity","type":"narrow"},{"name":"downregulation of proteasome channel opening activity","type":"narrow"},{"name":"downregulation of proteasome-activating ATPase activity","type":"exact"},{"name":"inhibition of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"narrow"},{"name":"inhibition of proteasomal ATPase activity","type":"narrow"},{"name":"inhibition of proteasome channel gating activity","type":"narrow"},{"name":"inhibition of proteasome channel opening activity","type":"narrow"},{"name":"inhibition of proteasome-activating ATPase activity","type":"narrow"},{"name":"negative regulation of ATPase involved in positive regulation of proteasomal protein catabolic process","type":"exact"},{"name":"negative regulation of proteasomal ATPase activity","type":"exact"},{"name":"negative regulation of proteasome channel gating activity","type":"narrow"},{"name":"negative regulation of proteasome channel opening activity","type":"narrow"}],"termid":"GO:1902886"}


id: GO:0045717
data:
  {"annotated_genes":["SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71211],"is_not":false,"summary":null,"term":"GO:0045717"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of fatty acid biosynthetic process","type":"exact"},{"name":"down-regulation of fatty acid biosynthetic process","type":"exact"},{"name":"downregulation of fatty acid biosynthetic process","type":"exact"},{"name":"inhibition of fatty acid biosynthetic process","type":"narrow"},{"name":"negative regulation of fatty acid anabolism","type":"exact"},{"name":"negative regulation of fatty acid biosynthesis","type":"exact"},{"name":"negative regulation of fatty acid formation","type":"exact"},{"name":"negative regulation of fatty acid synthesis","type":"exact"}],"termid":"GO:0045717","terms_by_termid":{"GO:0045717":null}}


id: MONDO:0000074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurodegeneration with brain iron accumulation (obsolete MONDO:0000074)","termid":"MONDO:0000074","xrefs":{"Monarch":{"xref_id":"0000074"}}}


id: PBO:0075040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-3","termid":"PBO:0075040"}


id: GO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"platelet dense granule lumen","termid":"GO:0031089"}


id: GO:2000644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor catabolic process","termid":"GO:0032801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor catabolic process","synonyms":[{"name":"regulation of receptor breakdown","type":"exact"},{"name":"regulation of receptor catabolism","type":"exact"},{"name":"regulation of receptor degradation","type":"exact"}],"termid":"GO:2000644"}


id: GO:0090057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of the different tissues of the root around its radial axis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial pattern formation","termid":"GO:0009956"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root radial pattern formation","termid":"GO:0090057"}


id: GO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine released from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by norepinephrine","termid":"GO:0003066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by neuronal norepinephrine","synonyms":[{"name":"positive regulation of heart rate by neuronal noradrenaline","type":"exact"}],"termid":"GO:0003113"}


id: PBO:0045720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4 pseudogene 1","termid":"PBO:0045720"}


id: PBO:0067021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 34, pseudogene","termid":"PBO:0067021"}


id: GO:0016672
data:
  {"annotated_genes":["SJAG_02599"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070224"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces quinone or a related compound.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02599":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.8.5.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, quinone or similar compound as acceptor","type":"exact"}],"termid":"GO:0016672","terms_by_termid":{"GO:0070224":null}}


id: MONDO:0100465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex neurodevelopmental disorder that involves more than one phenotype associated with the central nervous system, including but not limited to intellectual disability, autism, and seizures (epilepsy), in addition to one or more structural or functional anomaly(ies) that develops prenatally.","direct_ancestors":[{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder","termid":"MONDO:0100038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"complex neurodevelopmental disorder with or without congenital anomalies","termid":"MONDO:0100465","xrefs":{"Monarch":{"xref_id":"0100465"}}}


id: GO:0120184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a focal adhesion into its constituent components.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of focal adhesion disassembly","termid":"GO:0120182"},{"relation_name":"is_a","term_name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"},{"relation_name":"negatively_regulates","term_name":"focal adhesion disassembly","termid":"GO:0120181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of focal adhesion disassembly","termid":"GO:0120184"}


id: GO:0061607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propionyl-CoA + peptide = CoA + N-alpha-propionylpeptide. This reaction is the propionylation of the N-terminal amino acid residue of a peptide or protein.","definition_xrefs":["GOC:dph","PMID:23043182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"peptide alpha-N-propionyltransferase activity","synonyms":[{"name":"N-terminal propionyltransferase activity","type":"exact"}],"termid":"GO:0061607"}


id: PBO:0005614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monothiol glutaredoxin Grx3","termid":"PBO:0005614"}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: GO:0015645
data:
  {"annotated_genes":["SJAG_03909","SJAG_03471","SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[105920,113731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[105921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[105922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of a fatty acid to an acceptor, coupled to the hydrolysis of ATP.","definition_xrefs":["GOC:mah","GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fatty acid ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid CoA ligase activity","type":"related"},{"name":"fatty acyl-coenzyme A synthetase activity","type":"related"},{"name":"fatty-acid ligase activity","type":"exact"}],"termid":"GO:0015645","terms_by_termid":{"GO:0031956":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: SO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding aspartyl tRNA (SO:0000257).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic_acid_tRNA_primary_transcript","synonyms":[{"name":"aspartic acid tRNA primary transcript","type":"exact"}],"termid":"SO:0000214"}


id: PATO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A viviparous organism that has given birth five or more times.","definition_xrefs":["wiki:http://en.wikipedia.org/wiki/Parity_(biology)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiparous","termid":"PATO:0002369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grand multi[arous","termid":"PATO:0002372"}


id: PBO:0055652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3092","termid":"PBO:0055652"}


id: GO:0018026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form peptidyl-N6-methyl-L-lysine.","definition_xrefs":["RESID:AA0076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine monomethylation","termid":"GO:0018026"}


id: MONDO:0008803
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[85439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"}]},"cv_name":"mondo","definition":"Antley-Bixler syndrome is a very rare disorder characterized by craniosynostosis with midface hypoplasia, radiohumeral synostosis, femoral bowing and joint contractures.","definition_xrefs":["Orphanet:83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis syndrome, autosomal recessive","termid":"MONDO:0011679"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Antley-Bixler syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200975","NANDO:1200669","NORD:792","DOID:0050462","GARD:5826","icd11.foundation:2027710139","UMLS:C5234850","MEDGEN:1714404","DOID:0081289","SCTID:62964007"],"synonyms":[{"name":"Antley Bixler syndrome","type":"related"},{"name":"multisynostotic osteodysgenesis with long bone fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic with fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic, with fractures","type":"related"},{"name":"trapezoidocephaly synostosis syndrome","type":"related"},{"name":"trapezoidocephaly-synostosis syndrome","type":"exact"}],"termid":"MONDO:0008803","terms_by_termid":{"MONDO:0008726":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0008803"}}}


id: PBO:0070181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 96 pseudogene","termid":"PBO:0070181"}


id: SO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA polymerase III type 1 promoter with consensus sequence CAnnCCn.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_box","synonyms":[{"name":"C-box","type":"exact"}],"termid":"SO:0000622"}


id: PBO:0081036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12D","termid":"PBO:0081036"}


id: PBO:0063965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pirin","termid":"PBO:0063965"}


id: MONDO:0018759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"childhood-onset progressive contractures-limb-girdle weakness-muscle dystrophy syndrome","secondary_identifiers":["GARD:21942","UMLS:C5568863","Orphanet:466921","MEDGEN:1800286"],"termid":"MONDO:0018759","xrefs":{"Monarch":{"xref_id":"0018759"}}}


id: PBO:0091533
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binding affinity for ATP-bound F-actin Kd 35 nM","termid":"PBO:0091533"}


id: GO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phylloquinone, a quinone-derived compound synthesized by green plants. Phylloquinone has vitamin K activity and is known as vitamin K1.","definition_xrefs":["PMID:27337968","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phylloquinone metabolic process","synonyms":[{"name":"phylloquinone metabolism","type":"exact"},{"name":"phytomenadione metabolic process","type":"exact"},{"name":"phytomenadione metabolism","type":"exact"},{"name":"phytonadione metabolic process","type":"exact"},{"name":"phytonadione metabolism","type":"exact"},{"name":"phytylmenaquinone metabolic process","type":"exact"},{"name":"phytylmenaquinone metabolism","type":"exact"},{"name":"vitamin K1 metabolic process","type":"exact"},{"name":"vitamin K1 metabolism","type":"exact"}],"termid":"GO:0042374"}


id: PR:Q9HDV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine cleavage system H protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11715:SF0","PRO:DNx","OMA:SCHPO03446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system H protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.01","secondary_identifiers":["UniProtKB:Q9HDV9"],"synonyms":[{"name":"Spom972h-GCSH","type":"exact"},{"name":"glycine decarboxylase complex subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV9"}


id: GO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Immune response taking place in the Peyer's patch, nodular lymphoid structures on the serosal surface of the small intestine.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response in Peyer's patch","termid":"GO:0002388"}


id: PBO:0086539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YBR032W is not an essential gene","termid":"PBO:0086539"}


id: GO:0039023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephric duct are generated and organized. The pronephric duct collects the filtrate from the pronephric tubules and opens to the exterior of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10","ZFA:0000150","XAO:0000063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephric duct morphogenesis","termid":"GO:0072178"},{"relation_name":"part_of","term_name":"pronephric duct development","termid":"GO:0039022"},{"relation_name":"part_of","term_name":"pronephros morphogenesis","termid":"GO:0072114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric duct morphogenesis","termid":"GO:0039023"}


id: FYPO:0006277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an N-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PMID:22988247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0003290","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal N-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal N-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006277"}


id: PBO:0081607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF529 antisense RNA 1","termid":"PBO:0081607"}


id: GO:0140770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + tetradecanoyl-CoA = CoA + H+ + N(6)-tetradecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:1402651","RHEA:59752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0140770"}


id: PBO:0039042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 4","termid":"PBO:0039042"}


id: FYPO:0006747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal, distal to the side of the nucleus near the old cell end.","definition_xrefs":["PomBase:mah","PMID:8876193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric mitochondrial aggregation","termid":"FYPO:0003811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"asymmetric mitochondrial aggregation at old end","synonyms":[{"name":"asymmetric mitochondrial aggregation at old cell end","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old cell tip","type":"exact"},{"name":"asymmetric mitochondrial aggregation at old end during mitotic cell cycle","type":"related"},{"name":"asymmetric mitochondrial aggregation at old end during vegetative growth","type":"exact"},{"name":"mitochondria localized to one cell end","type":"related"},{"name":"monopolar intracellular mitochondrion distribution","type":"related"},{"name":"monopolar intracellular mitochondrion localisation","type":"related"},{"name":"monopolar intracellular mitochondrion localization","type":"related"},{"name":"monopolar mitochondrial aggregation","type":"related"},{"name":"monopolar mitochondrion distribution","type":"related"}],"termid":"FYPO:0006747"}


id: PBO:0001681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rhp51","termid":"PBO:0001681"}


id: PBO:0067623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 795, pseudogene","termid":"PBO:0067623"}


id: PBO:0074072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 47","termid":"PBO:0074072"}


id: PBO:0059947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 33","termid":"PBO:0059947"}


id: MONDO:0100285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of infants in which there is progressive obliteration or discontinuity of the extrahepatic biliary system, resulting in obstruction of bile flow.","definition_xrefs":["OMIM:210500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary atresia","termid":"MONDO:0008867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"extrahepatic biliary atresia","secondary_identifiers":["UMLS:C4520983","GARD:886","icd11.foundation:1813934523","MEDGEN:1621383","NCIT:C97069"],"synonyms":[{"name":"EHBA","type":"exact"},{"name":"biliary atresia, extrahepatic","type":"exact"}],"termid":"MONDO:0100285","xrefs":{"Monarch":{"xref_id":"0100285"}}}


id: PBO:0079947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 2","termid":"PBO:0079947"}


id: PBO:0054686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2094","termid":"PBO:0054686"}


id: PBO:0056086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY86 antisense RNA 1","termid":"PBO:0056086"}


id: PBO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5,_H4-K8,_H4-K12_and_H4-K16_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0036215"}


id: GO:0042081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylsphingolipidinositol (GSI) anchors, which attach membrane proteins to the lipid bilayer of the cell membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"GSI anchor metabolic process","synonyms":[{"name":"GPI/GSI anchor metabolic process","type":"broad"},{"name":"GPI/GSI anchor metabolism","type":"broad"},{"name":"GSI anchor metabolism","type":"exact"}],"termid":"GO:0042081"}


id: SO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The residue at an extremity of the sequence is not the terminal residue.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_terminal_residue","secondary_identifiers":["BS:00072"],"synonyms":[{"name":"non terminal","type":"exact"},{"name":"non_ter","type":"exact"}],"termid":"SO:0001084"}


id: GO:0170044
data:
  {"annotated_genes":["SJAG_03293","SJAG_04827","SJAG_00674","SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[79298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[88761,87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of non-proteinogenic amino acids.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00674":null,"SJAG_02496":null,"SJAG_03293":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"non-proteinogenic amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"non-proteinogenic amino acid breakdown","type":"exact"},{"name":"non-proteinogenic amino acid catabolism","type":"exact"},{"name":"non-proteinogenic amino acid degradation","type":"exact"}],"termid":"GO:0170044","terms_by_termid":{"GO:0009450":null,"GO:0019478":null,"GO:0036088":null}}


id: GO:0006639
data:
  {"annotated_genes":["SJAG_02907","SJAG_02763","SJAG_03609","SJAG_02089","SJAG_02487","SJAG_01036","SJAG_02683","SJAG_04041","SJAG_03162","SJAG_02543","SJAG_03604"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114488,112368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[71626,74908,77325,90375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[92233,98793,71875,117884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[115094,92234,94016,90454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid metabolic process","termid":"GO:0006638"},{"relation_name":"is_a","term_name":"glycerolipid metabolic process","termid":"GO:0046486"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"acylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acylglycerol metabolism","type":"exact"},{"name":"glyceride metabolic process","type":"exact"},{"name":"glyceride metabolism","type":"exact"}],"termid":"GO:0006639","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null,"GO:0046339":null}}


id: PR:Q7LKZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein FAM50A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04439","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM50 family protein C1020.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.12c","secondary_identifiers":["UniProtKB:Q7LKZ5"],"synonyms":[{"name":"Spom972h-FAM50A","type":"exact"}],"termid":"PR:Q7LKZ5"}


id: SO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where an inversion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_breakpoint","synonyms":[{"name":"inversion breakpoint","type":"exact"}],"termid":"SO:0001022"}


id: GO:0006857
data:
  {"annotated_genes":["SJAG_03497","SJAG_05182","SJAG_01660","SJAG_01344","SJAG_00922","SJAG_01983","SJAG_02139","SJAG_05213","SJAG_02602","SJAG_03577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[118643,118644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"},{"annotations":[95857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[113438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[97383,118503,96403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[75986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090374"},{"annotations":[97384,118504,96404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[108298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[103328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05182":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oligopeptide transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006857","terms_by_termid":{"GO:0035442":null,"GO:0036246":null,"GO:0071996":null,"GO:0090374":null,"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:0160007":null,"GO:1901583":null}}


id: PBO:0045822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 12","termid":"PBO:0045822"}


id: PBO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_pro-orthology_relationship_with","termid":"PBO:0034160"}


id: PBO:0056882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 2","termid":"PBO:0056882"}


id: GO:0060565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that prevents the activation of APC-Cdc20 complex activity regulating the mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inhibition of APC-Cdc20 complex activity (obsolete GO:0060565)","synonyms":[{"name":"inhibition of APC activity during mitotic cell cycle","type":"exact"},{"name":"inhibition of APC-Cdc20 complex activity","type":"exact"},{"name":"inhibition of APC/C activity during mitotic cell cycle","type":"related"},{"name":"inhibition of cyclosome activity during mitotic cell cycle","type":"related"},{"name":"inhibition of mitotic anaphase-promoting complex activity","type":"related"}],"termid":"GO:0060565"}


id: PR:O74902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC613.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C613.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.02","synonyms":[{"name":"Spom972h-SPCC613.02","type":"exact"}],"termid":"PR:O74902"}


id: PBO:0074053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 33","termid":"PBO:0074053"}


id: MONDO:0800371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 5","secondary_identifiers":["MEDGEN:934715","UMLS:C4310748"],"synonyms":[{"name":"RCM5","type":"exact"}],"termid":"MONDO:0800371","xrefs":{"Monarch":{"xref_id":"0800371"}}}


id: PBO:0049840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEATR3 antisense RNA 1","termid":"PBO:0049840"}


id: MONDO:0016395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"foveal hypoplasia-presenile cataract syndrome","secondary_identifiers":["MEDGEN:419129","GARD:406","UMLS:C2931644","Orphanet:2253","MESH:C537858"],"synonyms":[{"name":"O'Donnell-Pappas syndrome","type":"exact"}],"termid":"MONDO:0016395","xrefs":{"Monarch":{"xref_id":"0016395"}}}


id: SO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved cis-acting element that confers extreme-distance regulatory activity to an enhancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"range_extender_element","synonyms":[{"name":"REX","type":"exact"}],"termid":"SO:0002382"}


id: PBO:0027078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_plasma_membrane,_with_protein_mislocalized_to_cytoplasm,_during_glucose_starvation","termid":"PBO:0027078"}


id: MONDO:0011767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the WHRN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 31","secondary_identifiers":["GARD:22602","UMLS:C1846839","MESH:C564629","DOID:0110490","OMIM:607084","MEDGEN:339621"],"synonyms":[{"name":"DFNB31","type":"narrow"},{"name":"WHRN autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 31","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 31","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in WHRN","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 31","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 31","type":"exact"},{"name":"deafness, autosomal recessive 31","type":"narrow"},{"name":"deafness, autosomal recessive type 31","type":"narrow"},{"name":"whirler, mouse, homolog of","type":"related"}],"termid":"MONDO:0011767","xrefs":{"Monarch":{"xref_id":"0011767"}}}


id: FYPO:0006914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing terconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on terconazole","synonyms":[{"name":"normal cell population growth in presence of terconazole","type":"exact"},{"name":"normal cell population growth on terconazole","type":"exact"},{"name":"normal cellular response to terconazole","type":"related"},{"name":"normal vegetative cell population growth on terconazole","type":"exact"}],"termid":"FYPO:0006914"}


id: GO:0034020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-neoxanthin.","definition_xrefs":["EC:5.3.99.9","RHEA:10128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"neoxanthin synthase activity","secondary_identifiers":["MetaCyc:RXN1F-155","KEGG_REACTION:R06948"],"synonyms":[{"name":"NSY","type":"related"},{"name":"violaxanthin-neoxanthin isomerase (epoxide-opening) activity","type":"related"}],"termid":"GO:0034020"}


id: PBO:0054232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1614","termid":"PBO:0054232"}


id: GO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"}


id: PBO:0030632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_7-methylguanosine_cap_hypermethylation","termid":"PBO:0030632"}


id: GO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear matrix organization","termid":"GO:0043578"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear matrix anchoring at nuclear membrane","synonyms":[{"name":"nucleoskeleton anchoring at nuclear membrane","type":"exact"}],"termid":"GO:0090292"}


id: MONDO:1012934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hearing loss that occurs in dogs due to a mutation in the EPS8L2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder, non-human animal","termid":"MONDO:1012969"},{"relation_name":"is_a","term_name":"inherited auditory system disease, non-human animal","termid":"MONDO:1012970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, EPS8L2-related, dog","secondary_identifiers":["OMIA:002550-9615"],"termid":"MONDO:1012934","xrefs":{"Monarch":{"xref_id":"1012934"}}}


id: PBO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 157","termid":"PBO:0042088"}


id: PBO:0040162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate lyase pseudogene 1","termid":"PBO:0040162"}


id: MONDO:0038268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune neurological channelopathy (obsolete MONDO:0038268)","secondary_identifiers":["Orphanet:98750"],"termid":"MONDO:0038268","xrefs":{"Monarch":{"xref_id":"0038268"}}}


id: GO:0043691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peripheral cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism.","definition_xrefs":["PMID:7751809","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"reverse cholesterol transport","termid":"GO:0043691"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: PBO:0066027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 10","termid":"PBO:0066027"}


id: MONDO:0021162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carotenemia","secondary_identifiers":["DOID:9969","MEDGEN:56338","ICD9:278.3","SCTID:35487009","UMLS:C0154271"],"synonyms":[{"name":"acquired carotenemia","type":"exact"},{"name":"hypercarotinemia","type":"exact"}],"termid":"MONDO:0021162","xrefs":{"Monarch":{"xref_id":"0021162"}}}


id: MONDO:0971131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral diffuse uveal melanocytic proliferation disease","secondary_identifiers":["Orphanet:674968","UMLS:C5925078","MEDGEN:1863858"],"termid":"MONDO:0971131","xrefs":{"Monarch":{"xref_id":"0971131"}}}


id: GO:1905089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type 2 mitophagy.","definition_xrefs":["PMID:26942284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitophagy","termid":"GO:1901524"},{"relation_name":"regulates","term_name":"type 2 mitophagy","termid":"GO:0061734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of type 2 mitophagy","synonyms":[{"name":"regulation of PRKN-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"regulation of Park2-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"},{"name":"regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization","type":"exact"}],"termid":"GO:1905089"}


id: FYPO:0001545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing L-canavanine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on L-canavanine","synonyms":[{"name":"normal cell population growth in presence of L-canavanine","type":"exact"},{"name":"normal cell population growth on L-canavanine","type":"exact"},{"name":"normal cell population growth on canavanine","type":"broad"},{"name":"normal cellular response to L-canavanine","type":"related"},{"name":"normal vegetative cell population growth on L-canavanine","type":"exact"}],"termid":"FYPO:0001545"}


id: PBO:0117181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX25 antisense RNA 1","termid":"PBO:0117181"}


id: PBO:0083643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Elongase; involved in fatty acid and sphingolipid biosynthesis; synthesizes very long chain 20-26-carbon fatty acids from C18-CoA primers; involved in regulation of sphingolipid biosynthesis; lethality of the elo2 elo3 double null mutation is functionally complemented by human ELOVL1 and weakly complemented by human ELOVL3 or ELOV7","termid":"PBO:0083643"}


id: PBO:0051414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-62 (pseudogene)","termid":"PBO:0051414"}


id: GO:0034416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-diphosphoglycerate + H2O = phosphoglycerate + phosphate.","definition_xrefs":["GOC:mah","PMID:18413611"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphosphoglycerate phosphatase activity (obsolete GO:0034416)","synonyms":[{"name":"2,3-bisphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglycerate phosphatase activity","type":"exact"},{"name":"2,3-diphosphoglyceric acid phosphatase activity","type":"exact"},{"name":"diphosphoglycerate phosphatase activity","type":"exact"},{"name":"glycerate-2,3-diphosphate phosphatase activity","type":"exact"}],"termid":"GO:0034416"}


id: PBO:0091556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein, similar to cell surface molecules","termid":"PBO:0091556"}


id: GO:1990490
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large proton-transporting two-sector ATPase protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of protons across a membrane and is found in Archaea.","definition_xrefs":["PMID:15473999","PMID:24650628","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"archaeal proton-transporting A-type ATPase complex","synonyms":[{"name":"A-type ATPase protein complex","type":"broad"},{"name":"archaeal A-type ATPase protein complex","type":"broad"}],"termid":"GO:1990490"}


id: PBO:0113271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pH sensor molecule, component of RIM101 pathway; positive regulator of cell size; has role in cell wall construction and alkaline pH response; is glycosylated and phosphorylated; interacts with Dfg16p and Rim9p to form a pH-sensing complex; localization to plasma membrane is dependent on Dfg16p and Rim9p; has similarity to A. nidulans PalH","termid":"PBO:0113271"}


id: MONDO:0020803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A defect of the bundle branches or fascicles in the electrical conduction system of the heart.","definition_xrefs":["Wikipedia:Bundle_branch_block"],"gene_count":0,"genotype_count":0,"name":"obsolete bundle branch block (obsolete MONDO:0020803)","secondary_identifiers":["NANDO:2100046","NANDO:2200215","SCTID:6374002"],"termid":"MONDO:0020803","xrefs":{"Monarch":{"xref_id":"0020803"}}}


id: PBO:0072547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repetin","termid":"PBO:0072547"}


id: PBO:0057277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 499b","termid":"PBO:0057277"}


id: GO:0051283
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of sequestering of calcium ion","termid":"GO:0051282"},{"relation_name":"negatively_regulates","term_name":"sequestering of calcium ion","termid":"GO:0051208"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sequestering of calcium ion","type":"exact"},{"name":"down-regulation of sequestering of calcium ion","type":"exact"},{"name":"downregulation of sequestering of calcium ion","type":"exact"},{"name":"inhibition of sequestering of calcium ion","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) retention","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestering","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) sequestration","type":"exact"},{"name":"negative regulation of calcium ion (Ca2+) storage","type":"exact"},{"name":"negative regulation of retention of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051283","terms_by_termid":{"GO:0061454":null}}


id: PBO:0005025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane peptidase Atp23 (predicted)","termid":"PBO:0005025"}


id: PBO:0040837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIVM-ERCC5 readthrough","termid":"PBO:0040837"}


id: FYPO:0001720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific transport process is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal transport","termid":"FYPO:0001720"}


id: PBO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human retinoblastoma binding protein 2-like family","termid":"PBO:0000776"}


id: PBO:0064922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 4","termid":"PBO:0064922"}


id: PBO:0088147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; imports large neutral amino acids into the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088147"}


id: GO:0051677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"pullulan metabolic process","termid":"GO:0051676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pullulan biosynthetic process","termid":"GO:0051677"}


id: MONDO:0100319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A inflammatory syndrome in adults infected by the SARS-CoV-2 with severe illness requiring hospitalization in a person aged ≥21 years; a positive test result for current or previous SARS-CoV-2 infection (nucleic acid, antigen, or antibody) during admission or in the previous 12 weeks; severe dysfunction of one or more extrapulmonary organ systems (e.g., hypotension or shock, cardiac dysfunction, arterial or venous thrombosis or thromboembolism, or acute liver injury); laboratory evidence of severe inflammation (e.g., elevated CRP, ferritin, D-dimer, or interleukin-6); and absence of severe respiratory illness (to exclude patients in which inflammation and organ dysfunction might be attributable simply to tissue hypoxia).","definition_xrefs":["PMID:33031361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multisystem inflammatory syndrome in children and adults","termid":"MONDO:0035375"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COVID-19–associated multisystem inflammatory syndrome in adults","synonyms":[{"name":"MIS-A","type":"exact"}],"termid":"MONDO:0100319","xrefs":{"Monarch":{"xref_id":"0100319"}}}


id: PBO:0055365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2794","termid":"PBO:0055365"}


id: PBO:0069510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 778, pseudogene","termid":"PBO:0069510"}


id: FYPO:0002654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which exocytic vesicles are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"enlarged exocytic vesicles","synonyms":[{"name":"enlarged exocytic vesicles during mitotic cell cycle","type":"related"},{"name":"enlarged exocytic vesicles during vegetative growth","type":"exact"}],"termid":"FYPO:0002654"}


id: GO:0050061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty aldehyde + H2O + NAD+ = a long-chain fatty acid + 2 H+ + NADH.","definition_xrefs":["RHEA:10652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty aldehyde dehydrogenase (NAD+) activity","termid":"GO:0102673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty aldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:LONG-CHAIN-ALDEHYDE-DEHYDROGENASE-RXN","UM-BBD_reactionID:r1404","EC:1.2.1.48"],"synonyms":[{"name":"fatty aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"long-chain aliphatic aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain fatty aldehyde dehydrogenase activity","type":"related"},{"name":"long-chain-aldehyde dehydrogenase activity","type":"exact"},{"name":"long-chain-aldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050061"}


id: GO:0102465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + 2 NADH + 2 H+ + 2 O2 = nostoxanthin + 2 NAD + 2 H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"zeaxanthin 2,2'-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14018"],"termid":"GO:0102465"}


id: PBO:0088402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC) subunit Shf1","termid":"PBO:0088402"}


id: FYPO:0002391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at ribosomal DNA repeat regions is decreased.","definition_xrefs":["PMID:24945319","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at ncRNA genes","termid":"FYPO:0004346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromatin at rDNA","secondary_identifiers":["FYPO:0006350"],"synonyms":[{"name":"decreased protein localisation to chromatin at rDNA","type":"exact"},{"name":"decreased protein localization to chromatin at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at rDNA during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at rRNA genes","type":"exact"},{"name":"decreased protein localization to chromatin at ribosomal DNA","type":"exact"},{"name":"decreased protein localization to rDNA","type":"exact"},{"name":"reduced protein localization to chromatin at rDNA","type":"exact"}],"termid":"FYPO:0002391"}


id: PBO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B","termid":"PBO:0039714"}


id: PBO:0044900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derlin 2","termid":"PBO:0044900"}


id: PR:Q9P789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf2 gene.","definition_xrefs":["UniProtKB:Q9P789","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein P35G2.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.14","synonyms":[{"name":"Spom972h-puf2","type":"exact"}],"termid":"PR:Q9P789"}


id: PBO:0058603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6735","termid":"PBO:0058603"}


id: MONDO:0016667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sickle cell disease associated with an other hemoglobin anomaly (obsolete MONDO:0016667)","secondary_identifiers":["Orphanet:251355"],"synonyms":[{"name":"Double heterozygotes sickling disorder","type":"exact"}],"termid":"MONDO:0016667","xrefs":{"Monarch":{"xref_id":"0016667"}}}


id: GO:0030681
data:
  {"annotated_genes":["SJAG_03234","SJAG_04916","SJAG_04582","SJAG_01369","SJAG_00955","SJAG_03796","SJAG_02553","SJAG_06613","SJAG_02547","SJAG_00306","SJAG_01623"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71536,99814,60628,71975,91424,118888,63763,104872,115605,115693,72009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"}]},"cv_name":"cellular_component","definition":"A ribonuclease P complex that generally contains a single RNA molecule and several protein molecules. Examples of this complex are found in Archaeal species.","definition_xrefs":["PMID:12045094","GOC:mah","PMID:11142368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonuclease P complex","termid":"GO:0030677"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00955":null,"SJAG_01369":null,"SJAG_01623":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03796":null,"SJAG_04582":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"multimeric ribonuclease P complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"multimeric RNase P complex","type":"exact"}],"termid":"GO:0030681","terms_by_termid":{"GO:0005655":null}}


id: PR:Q96WV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdk9 gene.","definition_xrefs":["UniProtKB:Q96WV9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.10","synonyms":[{"name":"Spom972h-cdk9","type":"exact"},{"name":"cell division protein kinase 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV9"}


id: FYPO:0008052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitosis in which the dimethylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0005225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during mitosis","termid":"FYPO:0008052"}


id: GO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 25-hydroxycholesterol + O2 + reduced [NADPH--hemoprotein reductase] = 7alpha,25-dihydroxycholesterol + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Also converts (25R)-cholest-5-ene-3beta,26-diol to (25R)-cholest-5-en-3beta,7alpha,26-triol.","definition_xrefs":["EC:1.14.14.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"25-hydroxycholesterol 7-alpha-hydroxylase activity","synonyms":[{"name":"25-hydroxycholesterol 7alpha-monooxygenase activity","type":"related"},{"name":"CYP7B1","type":"related"},{"name":"CYP7B1 oxysterol 7alpha-hydroxylase activity","type":"related"},{"name":"cholest-5-ene-3beta,25-diol,NADPH:oxygen oxidoreductase (7alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033783"}


id: GO:0061870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of hepatic stellate cell migration.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast migration","termid":"GO:0010763"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell migration","termid":"GO:0061869"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell migration","termid":"GO:0061868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell migration","termid":"GO:0061870"}


id: PBO:0055755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA osteogenesis associated","termid":"PBO:0055755"}


id: GO:0010359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anion channel activity.","definition_xrefs":["PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transmembrane transport","termid":"GO:1903959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of anion channel activity","termid":"GO:0010359"}


id: PBO:0059520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4","termid":"PBO:0059520"}


id: MONDO:0001186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by persistent or recurrent episodes of feeling detached from one's self (either one's body or one's mental processes), although the sufferer remains aware that this is only a feeling and does not represent reality.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depersonalization disorder","secondary_identifiers":["MEDGEN:151919","NCIT:C94331","SCTID:70764005","UMLS:C0683416","ICD9:300.6","DOID:11038"],"synonyms":[{"name":"neurotic derealization","type":"exact"}],"termid":"MONDO:0001186","xrefs":{"Monarch":{"xref_id":"0001186"}}}


id: GO:0070530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination formed by linkages between lysine residues at position 63 in the target protein.","definition_xrefs":["PMID:15556404","PMID:17525341","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyubiquitin modification-dependent protein binding","termid":"GO:0031593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"K63-linked polyubiquitin modification-dependent protein binding","termid":"GO:0070530"}


id: GO:0018510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrophloroglucinol + NADP+ = H+ + NADPH + phloroglucinol.","definition_xrefs":["RHEA:10080","EC:1.3.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phloroglucinol reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0007","KEGG_REACTION:R05308","MetaCyc:R5-RXN"],"synonyms":[{"name":"dihydrophloroglucinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018510"}


id: GO:0099087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a messenger ribonucleoprotein complex along microtubules in axons, towards the presynapse.","definition_xrefs":["PMID:26586091","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"anterograde axonal transport of messenger ribonucleoprotein complex","synonyms":[{"name":"anterograde axonal transport of mRNA RNP complex","type":"exact"}],"termid":"GO:0099087"}


id: PR:Q10058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F5.03c gene.","definition_xrefs":["UniProtKB:Q10058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase C1F5.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.03c","synonyms":[{"name":"Spom972h-SPAC1F5.03c","type":"exact"}],"termid":"PR:Q10058"}


id: MONDO:0020613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--lke (obsolete MONDO:0020613)","secondary_identifiers":["OMIM:111130"],"synonyms":[{"name":"BLOOD GROUP--LKE","type":"related"},{"name":"Blood Group--Luke","type":"related"},{"name":"Blood Group--Luke, Formerly","type":"related"},{"name":"LKE","type":"related"}],"termid":"MONDO:0020613","xrefs":{"Monarch":{"xref_id":"0020613"}}}


id: PR:Q92338
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ABC1 homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.18","synonyms":[{"name":"Spom972h-abc1","type":"exact"}],"termid":"PR:Q92338"}


id: MONDO:0000656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha chain disease (obsolete MONDO:0000656)","termid":"MONDO:0000656","xrefs":{"Monarch":{"xref_id":"0000656"}}}


id: MONDO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the brain stem.","definition_xrefs":["NCIT:C3570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"brainstem neoplasm","termid":"MONDO:0021228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brainstem cancer","secondary_identifiers":["DOID:4203","ICD9:191.7","MESH:D020295","NCIT:C5967","SCTID:363473003","UMLS:C0153641","MEDGEN:57566"],"synonyms":[{"name":"brain stem cancer","type":"related"},{"name":"brainstem cancer","type":"exact"},{"name":"cancer of brainstem","type":"exact"},{"name":"malignant brain stem neoplasm","type":"broad"},{"name":"malignant brain stem tumor","type":"broad"},{"name":"malignant brain stem tumour","type":"broad"},{"name":"malignant brainstem neoplasm","type":"broad"},{"name":"malignant brainstem tumor","type":"broad"},{"name":"malignant brainstem tumour","type":"broad"},{"name":"malignant neoplasm of brain stem","type":"exact"},{"name":"malignant neoplasm of brainstem","type":"exact"},{"name":"malignant neoplasm of the brain stem","type":"exact"},{"name":"malignant neoplasm of the brainstem","type":"exact"},{"name":"malignant tumor of brain stem","type":"exact"},{"name":"malignant tumor of brainstem","type":"exact"},{"name":"malignant tumor of the brain stem","type":"exact"},{"name":"malignant tumor of the brainstem","type":"exact"},{"name":"malignant tumour of brain stem","type":"exact"},{"name":"malignant tumour of brainstem","type":"exact"},{"name":"malignant tumour of the brain stem","type":"exact"},{"name":"malignant tumour of the brainstem","type":"exact"},{"name":"neoplasm of adult brain stem","type":"broad"},{"name":"neoplasm of brain stem","type":"broad"},{"name":"primary brain stem neoplasm","type":"broad"},{"name":"primary brain stem tumor","type":"broad"},{"name":"primary brain stem tumour","type":"broad"},{"name":"tumor of the brainstem","type":"broad"},{"name":"tumour of adult brainstem","type":"broad"},{"name":"tumour of the brainstem","type":"broad"}],"termid":"MONDO:0002912","xrefs":{"Monarch":{"xref_id":"0002912"}}}


id: PBO:0052985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3 pseudogene 1","termid":"PBO:0052985"}


id: FYPO:0001275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs to a lower extent than normal during a cellular response to hypoxia. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased protein-protein interaction during cellular response to hypoxia","synonyms":[{"name":"decreased protein binding during cellular response to hypoxia","type":"exact"},{"name":"decreased protein-protein interaction in response to hypoxia","type":"related"},{"name":"reduced protein-protein interaction during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001275"}


id: PBO:0028563
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_DNA_double-strand_break_formation","termid":"PBO:0028563"}


id: MONDO:1011725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease, non-human animal","termid":"MONDO:1011724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin 7S deficiency, non-human animal","secondary_identifiers":["OMIA:000551"],"termid":"MONDO:1011725","xrefs":{"Monarch":{"xref_id":"1011725"}}}


id: GO:0010565
data:
  {"annotated_genes":["SJAG_03130","SJAG_01672","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[89531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"},{"annotations":[75466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01402":null,"SJAG_01672":null,"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ketone metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010565","terms_by_termid":{"GO:0010510":null,"GO:0045717":null,"GO:1904775":null}}


id: MONDO:0018459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated glycerol kinase deficiency (GKD) is a very rare X-linked disorder of glycerol metabolism characterized biochemically by elevated plasma and urine glycerol levels, and clinically by variable neurometabolic manifestations, depending on the age of onset, and varying from a life-threatening childhood metabolic crisis to an asymptomatic adult form (infantile GKD, juvenile GKD, and adult GKD ).","definition_xrefs":["Orphanet:408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"isolated glycerol kinase deficiency","secondary_identifiers":["GARD:2807","icd11.foundation:542432712","MEDGEN:657821","UMLS:C0574108"],"synonyms":[{"name":"hyperglycerolemia","type":"exact"},{"name":"isolated inborn glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic inborn glycerol kinase deficiency","type":"exact"}],"termid":"MONDO:0018459","xrefs":{"Monarch":{"xref_id":"0018459"}}}


id: PBO:0075884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 2","termid":"PBO:0075884"}


id: PBO:0082307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic protease; hyperglycosylated member of the yapsin family of proteases, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor; involved in nutrient limitation-induced cleavage of the extracellular inhibitory domain of signaling mucin Msb2p, resulting in activation of the filamentous growth MAPK pathway; involved with other yapsins in the cell wall integrity response; role in KEX2-independent processing of the alpha factor precursor","termid":"PBO:0082307"}


id: PBO:0089775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type Gaf1","termid":"PBO:0089775"}


id: GO:0003831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + N-acetyl-beta-D-glucosaminylglycopeptide = UDP + beta-D-galactosyl-(1->4)-N-acetyl-beta-D-glucosaminylglycopeptide.","definition_xrefs":["EC:2.4.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2046298","RHEA:22932","Reactome:R-HSA-4793956","Reactome:R-HSA-9035949","Reactome:R-HSA-9035950","Reactome:R-HSA-975919","MetaCyc:2.4.1.38-RXN","Reactome:R-HSA-2046265","Reactome:R-HSA-3656230","Reactome:R-HSA-1912352","Reactome:R-HSA-2025723"],"synonyms":[{"name":"GalT activity","type":"related"},{"name":"UDP-galactose--glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose-glycoprotein galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:N-acetyl-beta-D-glucosaminylglycopeptide beta-1,4-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-(1,4)-galactosyltransferase activity","type":"related"},{"name":"beta-N-acetyl-beta-1,4-galactosyltransferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyl-transferase activity","type":"related"},{"name":"glycoprotein 4-beta-galactosyltransferase activity","type":"related"},{"name":"glycoprotein beta-galactosyltransferase activity","type":"related"},{"name":"thyroid galactosyltransferase activity","type":"narrow"},{"name":"thyroid glycoprotein beta-galactosyltransferase","type":"narrow"},{"name":"uridine diphosphogalactose-glycoprotein galactosyltransferase activity","type":"related"}],"termid":"GO:0003831"}


id: MOD:00358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FMN)-L-histidine.","definition_xrefs":["PubMed:12417325","Unimod:409#H","RESID:AA0353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FMN)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-(3-[8alpha riboflavin 5'-dihydrogen phosphate]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FMN)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FMN","type":"exact"},{"name":"8alpha-(N3'-histidyl)FMN","type":"exact"},{"name":"FMNH","type":"related"},{"name":"N(pi)-(8alpha-FMN)-histidine","type":"exact"},{"name":"Npros8aFMNHis","type":"exact"},{"name":"flavin mononucleotide","type":"related"},{"name":"pros-(8alpha-FMN)-histidine","type":"exact"}],"termid":"MOD:00358"}


id: PBO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-mRna Processing","termid":"PBO:0015689"}


id: MONDO:0018118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with central nervous system predominant involvement (obsolete MONDO:0018118)","secondary_identifiers":["Orphanet:352306"],"termid":"MONDO:0018118","xrefs":{"Monarch":{"xref_id":"0018118"}}}


id: GO:0036188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-diene-18-al + H2O + NAD+ = abieta-7,13-diene-18-oate + NADH + H+.","definition_xrefs":["EC:1.2.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"abieta-7,13-dien-18-al dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-10624","RHEA:26225","KEGG_REACTION:R06357"],"synonyms":[{"name":"abietadienal dehydrogenase","type":"broad"}],"termid":"GO:0036188"}


id: PBO:0066819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 118","termid":"PBO:0066819"}


id: FYPO:0006486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4,5)P3 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4,5-trisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006486"}


id: MONDO:0859234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"agammaglobulinemia 8b, autosomal recessive","secondary_identifiers":["OMIM:619824","DOID:0081143","UMLS:C5676958","MEDGEN:1808468"],"termid":"MONDO:0859234","xrefs":{"Monarch":{"xref_id":"0859234"}}}


id: MONDO:1010920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myositis ossificans that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis ossificans, non-human animal","termid":"MONDO:1010197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myositis ossificans, pig","secondary_identifiers":["OMIA:000697-9823"],"termid":"MONDO:1010920","xrefs":{"Monarch":{"xref_id":"1010920"}}}


id: PBO:0112746
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSF-Responsive Gene","termid":"PBO:0112746"}


id: PBO:0066617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin Rho GTPase binding protein 2","termid":"PBO:0066617"}


id: PBO:0061537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 2","termid":"PBO:0061537"}


id: FYPO:0003301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ubiquitin-dependent protein degradation via the N-end rule pathway begins later than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein degradation during meiosis","termid":"FYPO:0006531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein degradation via N-end rule pathway during meiosis","synonyms":[{"name":"delayed onset of protein degradation via N-end rule pathway during meiotic nuclear division","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein breakdown via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolic process via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein catabolism via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed onset of ubiquitin-dependent protein degradation via the N-end rule pathway during meiosis","type":"exact"},{"name":"delayed protein degradation via N-end rule pathway during meiosis","type":"exact"}],"termid":"FYPO:0003301"}


id: MONDO:0016856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mowat-Wilson syndrome","termid":"MONDO:0009341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0002320"],"is_obsolete":false,"name":"Mowat-Wilson syndrome due to a ZEB2 point mutation","secondary_identifiers":["GARD:17249","MEDGEN:1842263","Orphanet:261552","UMLS:C5679681"],"synonyms":[{"name":"Hirschsprung disease and intellectual disability due to a ZEB2 point mutation","type":"exact"}],"termid":"MONDO:0016856","xrefs":{"Monarch":{"xref_id":"0016856"}}}


id: PBO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 3","termid":"PBO:0040015"}


id: PATO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that inheres in a 3 dimensional entity.","definition_xrefs":["PATOC:OREGON"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-D shape","termid":"PATO:0002266"}


id: PBO:0079329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 17A","termid":"PBO:0079329"}


id: PBO:0070151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 65 pseudogene","termid":"PBO:0070151"}


id: GO:0007111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that results in the division of the cytoplasm of a cell after meiosis II, resulting in the separation of the original cell into two daughter cells.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II cytokinesis","synonyms":[{"name":"cytokinesis after meiosis II","type":"exact"}],"termid":"GO:0007111"}


id: MONDO:1011220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corneal dystrophy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal dystrophy, non-human animal","termid":"MONDO:1010320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal dystrophy, domestic cat","secondary_identifiers":["OMIA:000230-9685"],"termid":"MONDO:1011220","xrefs":{"Monarch":{"xref_id":"1011220"}}}


id: GO:0009168
data:
  {"annotated_genes":["SJAG_01814","SJAG_03355","SJAG_01070","SJAG_01661","SJAG_04634","SJAG_00964","SJAG_02364","SJAG_04123","SJAG_01081","SJAG_03140","SJAG_06634","SJAG_04681","SJAG_01298","SJAG_02850","SJAG_00044","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79181,77151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[70286,77123,60147,58002,64558,72092,57099,65565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[57088,74295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[75080,63136,59501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[65070,75996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate biosynthetic process","termid":"GO:0009127"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-73817"],"synonyms":[{"name":"purine ribonucleoside monophosphate anabolism","type":"exact"},{"name":"purine ribonucleoside monophosphate biosynthesis","type":"exact"},{"name":"purine ribonucleoside monophosphate formation","type":"exact"},{"name":"purine ribonucleoside monophosphate synthesis","type":"exact"}],"termid":"GO:0009168","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null}}


id: PBO:0053067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte transmembrane adaptor 1","termid":"PBO:0053067"}


id: PBO:0055850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP1 antisense RNA","termid":"PBO:0055850"}


id: PBO:0073856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A5","termid":"PBO:0073856"}


id: MONDO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Visual impairment due to visual cortex dysfunction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"},{"relation_name":"is_a","term_name":"visual cortex disorder","termid":"MONDO:0003584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical blindness","secondary_identifiers":["DOID:11831","MEDGEN:57834","MESH:D019575","ICD9:377.75","NCIT:C118707","SCTID:68574006","UMLS:C0155320"],"synonyms":[{"name":"CVI","type":"exact"},{"name":"cerebral visual impairment","type":"exact"},{"name":"cortical visual impairment","type":"exact"},{"name":"cortical/cerebral visual impairment","type":"exact"}],"termid":"MONDO:0001385","xrefs":{"Monarch":{"xref_id":"0001385"}}}


id: PBO:0003061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate kinase (predicted)","termid":"PBO:0003061"}


id: GO:0102754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + chlorophyllide b + (E)-3,7,11,15-tetramethylhexadec-2-en-1-yl diphosphate = chlorophyll b + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorophyllide-b:phytyl-diphosphate phytyltransferase activity (obsolete GO:0102754)","termid":"GO:0102754"}


id: PR:P41412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- res2 gene.","definition_xrefs":["UniProtKB:P41412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle-related protein res2/pct1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.09c","synonyms":[{"name":"Spom972h-res2","type":"exact"}],"termid":"PR:P41412"}


id: PBO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proton_transport","termid":"PBO:0030636"}


id: MONDO:0006255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the large blood vessels. It is characterized by the presence of tumor cells that grow within the lumen of the blood vessels. The intraluminal tumor growth may result in vascular obstruction and spread of tumor emboli to peripheral organs. The prognosis is usually poor.","definition_xrefs":["NCIT:C53677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell sarcoma","termid":"MONDO:0002927"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intimal sarcoma","secondary_identifiers":["EFO:1000305","MEDGEN:317791","ONCOTREE:INTS","UMLS:C1708550"],"synonyms":[{"name":"INTS","type":"related"}],"termid":"MONDO:0006255","xrefs":{"Monarch":{"xref_id":"0006255"}}}


id: GO:0097530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a granulocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:24193336","GOC:cvs","PMID:24163421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte migration","termid":"GO:0097530"}


id: PBO:0003559
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal nocturnal haemoglobinuri","termid":"PBO:0003559"}


id: GO:0034168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 10 signaling pathway","termid":"GO:0034167"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"negative regulation of TLR10 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034168"}


id: GO:0071911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Release of neurotransmitter at the synapse that lasts for just a few milliseconds after action potential invasion.","definition_xrefs":["GOC:dsf","PMID:19477156","PMID:20643933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synchronous neurotransmitter secretion","termid":"GO:0071911"}


id: FYPO:0001640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-leucine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular leucine level","synonyms":[{"name":"normal cellular L-leucine level","type":"exact"},{"name":"normal cellular leucine level during mitotic cell cycle","type":"related"},{"name":"normal cellular leucine level during vegetative growth","type":"exact"},{"name":"normal level of leucine in cell","type":"exact"}],"termid":"FYPO:0001640"}


id: PBO:0055785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 5","termid":"PBO:0055785"}


id: GO:1904728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of replicative senescence.","definition_xrefs":["PMID:23496142","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"positively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of replicative senescence","synonyms":[{"name":"activation of replicative senescence","type":"narrow"},{"name":"up regulation of replicative senescence","type":"exact"},{"name":"up-regulation of replicative senescence","type":"exact"},{"name":"upregulation of replicative senescence","type":"exact"}],"termid":"GO:1904728"}


id: MONDO:0010243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked immunoneurologic disorder is characterized by immune deficiency and neurological disorders in females, and by neonatal death in males.","definition_xrefs":["Orphanet:2571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"X-linked immunoneurologic disorder","secondary_identifiers":["SCTID:719827008","UMLS:C1848144","GARD:274","MEDGEN:341162","icd11.foundation:1464555617","MESH:C536743","OMIM:300076"],"synonyms":[{"name":"Woods Black Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome","type":"exact"},{"name":"Woods-Black-Norbury syndrome, X-linked dominant","type":"exact"},{"name":"X-linked immunoneurological disorder","type":"exact"},{"name":"immunoneurologic disorder, X-linked","type":"exact"},{"name":"neonatal death immune deficiency","type":"exact"}],"termid":"MONDO:0010243","xrefs":{"Monarch":{"xref_id":"0010243"}}}


id: MOD:01808
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-leucine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated leucine","termid":"MOD:00662"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated leucine","synonyms":[{"name":"MeLeu","type":"exact"}],"termid":"MOD:01808"}


id: PBO:0083048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dethiobiotin synthetase; catalyzes the third step in the biotin biosynthesis pathway; BIO4 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis; BIO3 and BIO4 were acquired by horizontal gene transfer (HGT) from bacteria; expression appears to be repressed at low iron levels","termid":"PBO:0083048"}


id: PBO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate chain Dic1","termid":"PBO:0003405"}


id: PBO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 47","termid":"PBO:0048336"}


id: PBO:0076271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYBU antisense RNA 1","termid":"PBO:0076271"}


id: GO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel.","definition_xrefs":["GOC:mah","GOC:sl","PMID:10206335","PMID:16931858","PMID:21196346","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"amelogenesis","termid":"GO:0097186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enamel mineralization","synonyms":[{"name":"enamel formation","type":"related"}],"termid":"GO:0070166"}


id: PBO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 113","termid":"PBO:0071111"}


id: MONDO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of the glossopharyngeal nerve.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossopharyngeal nerve paralysis","secondary_identifiers":["DOID:3816","MEDGEN:1696475","UMLS:C5231192","NCIT:C27335"],"synonyms":[{"name":"cranial nerve palsy of glossopharyngeal nerve","type":"exact"},{"name":"glossopharyngeal nerve cranial nerve palsy","type":"exact"}],"termid":"MONDO:0002781","xrefs":{"Monarch":{"xref_id":"0002781"}}}


id: PBO:0070067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 24, pseudogene","termid":"PBO:0070067"}


id: PBO:0044768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 2","termid":"PBO:0044768"}


id: PBO:0046131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H pseudogene 1","termid":"PBO:0046131"}


id: PBO:0072828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMSN1 antisense RNA 1","termid":"PBO:0072828"}


id: GO:0048448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the stamen are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen morphogenesis","secondary_identifiers":["GO:0048426"],"termid":"GO:0048448"}


id: FYECO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bleomycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bleomycin","termid":"FYECO:0000277"}


id: GO:0016683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors (obsolete GO:0016683)","synonyms":[{"name":"oxidoreductase activity, acting on diphenols and related substances as donors, other acceptors","type":"exact"}],"termid":"GO:0016683"}


id: PATO:0000722
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000722 relative yield value (obsolete PATO:0000722)","termid":"PATO:0000722"}


id: GO:0009806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["PMID:10074466","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignan metabolic process","synonyms":[{"name":"lignan metabolism","type":"exact"}],"termid":"GO:0009806"}


id: PBO:0088362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(37)-N(1))-methyltransferase activity Trm5","termid":"PBO:0088362"}


id: PATO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's rate of change of momentum.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"force","synonyms":[{"name":"force amplitude","type":"exact"}],"termid":"PATO:0001035"}


id: GO:0030022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A constituent of the extracellular matrix that facilitates attachment of cells to the matrix.","definition_xrefs":["GOC:mah","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete adhesive extracellular matrix constituent (obsolete GO:0030022)","synonyms":[{"name":"adhesive extracellular matrix constituent","type":"exact"}],"termid":"GO:0030022"}


id: GO:0004617
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64858],"is_not":false,"summary":null,"term":"GO:0004617"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phosphoglycerate + NAD+ = 3-phosphohydroxypyruvate + NADH + H+.","definition_xrefs":["EC:1.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoglycerate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:PGLYCDEHYDROG-RXN","Reactome:R-HSA-977348","RHEA:12641"],"synonyms":[{"name":"3-phospho-D-glycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"3-phosphoglycerate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"3-phosphoglyceric acid dehydrogenase activity","type":"related"},{"name":"3PHP reductase activity","type":"related"},{"name":"D- and L-HGA","type":"related"},{"name":"D-3-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"D-3-phosphoglycerate:NAD+ oxidoreductase activity","type":"related"},{"name":"PGDH activity","type":"related"},{"name":"SerA","type":"related"},{"name":"SerA 3PG dehydrogenase activity","type":"related"},{"name":"alpha-KG reductase activity","type":"related"},{"name":"alpha-phosphoglycerate dehydrogenase activity","type":"related"},{"name":"alphaKG reductase activity","type":"related"},{"name":"glycerate 3-phosphate dehydrogenase activity","type":"related"},{"name":"glycerate-1,3-phosphate dehydrogenase activity","type":"related"},{"name":"phosphoglycerate oxidoreductase activity","type":"related"},{"name":"phosphoglyceric acid dehydrogenase activity","type":"related"}],"termid":"GO:0004617","terms_by_termid":{"GO:0004617":null}}


id: PBO:0041327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 80","termid":"PBO:0041327"}


id: PBO:0036298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg101","termid":"PBO:0036298"}


id: PBO:0055559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2995","termid":"PBO:0055559"}


id: MONDO:0005419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A drug dependence that is a psychological dependency on the regular use of methamphetamine.","definition_xrefs":["EFO:0004701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methamphetamine dependence","secondary_identifiers":["MEDGEN:735816","UMLS:C1533217"],"termid":"MONDO:0005419","xrefs":{"Monarch":{"xref_id":"0005419"}}}


id: PATO:0000494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000494 period value (obsolete PATO:0000494)","termid":"PATO:0000494"}


id: PBO:0060563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBL1, DAN family BMP antagonist","termid":"PBO:0060563"}


id: PBO:0059972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 17","termid":"PBO:0059972"}


id: GO:0021802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of cells from the ventricular zone that is independent of radial glial cells. Cells extend processes that terminate at the pial surface and follow the processes as they migrate.","definition_xrefs":["GOC:dgh","GOC:jid","GO_REF:0000021","GOC:cls","PMID:12626695","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somal translocation","synonyms":[{"name":"perikaryal translocation of Morest","type":"exact"}],"termid":"GO:0021802"}


id: SO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is edited.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"edited","termid":"SO:0000116"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_CDS","synonyms":[{"name":"edited CDS","type":"exact"}],"termid":"SO:0000935"}


id: PBO:0089405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein","termid":"PBO:0089405"}


id: PBO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition","termid":"PBO:0006715"}


id: MONDO:0018947
data:
  {"annotated_genes":["SJAG_00185","SJAG_03248"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009709"},{"annotations":[85807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010683"}]},"cv_name":"mondo","definition":"Centronuclear myopathy (CNM) is an inherited neuromuscular disorder characterized by clinical features of a congenital myopathy and centrally placed nuclei on muscle biopsy.","definition_xrefs":["Orphanet:595"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare disorder with ptosis (obsolete MONDO:0020169)","termid":"MONDO:0020169"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_03248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"centronuclear myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:101","NORD:909","NANDO:1200482","OMIMPS:160150","UMLS:C0175709","NCIT:C84648","icd11.foundation:742097637","SCTID:82077006","MESH:D020914","MEDGEN:104495","DOID:14717","NANDO:1200481","NANDO:2200867"],"synonyms":[{"name":"CNM","type":"exact"},{"name":"centronuclear myopathy","type":"exact"},{"name":"myopathy, centronuclear","type":"exact"},{"name":"myopathy, myotubular","type":"related"},{"name":"myotubular myopathy","type":"exact"}],"termid":"MONDO:0018947","terms_by_termid":{"MONDO:0009709":null,"MONDO:0010683":null},"xrefs":{"Monarch":{"xref_id":"0018947"}}}


id: SO:1000055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation changes, usually destroys, the first coding triplet of a gene. Usually prevents translation although another initiator codon may be used.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000055 sequence_variant_causing_initiator_codon_change_in_transcript (obsolete SO:1000055)","synonyms":[{"name":"mutation causing initiator codon change in transcript","type":"related"},{"name":"sequence variant causing initiator codon change in transcript","type":"exact"}],"termid":"SO:1000055"}


id: GO:0086005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a ventricular cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}


id: FYPO:0009029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on arginine nitrogen source","synonyms":[{"name":"increased growth on arginine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0009029"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["PMID:11420311","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: PBO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muskelin homolog (predicted)","termid":"PBO:0002183"}


id: PBO:0068446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 20, pseudogene","termid":"PBO:0068446"}


id: PBO:0049584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 2","termid":"PBO:0049584"}


id: PBO:0071247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 88","termid":"PBO:0071247"}


id: PBO:0082563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone for Replication Protein A complex (RPA); involved in nuclear import of RPA and its binding to ssDNA at replication forks; has a role in regulation of Ty1 transposition","termid":"PBO:0082563"}


id: MONDO:0011590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anisomastia","secondary_identifiers":["MEDGEN:381317","OMIM:605746","MESH:C565299","UMLS:C1854013"],"synonyms":[{"name":"anisomastia","type":"exact"}],"termid":"MONDO:0011590","xrefs":{"Monarch":{"xref_id":"0011590"}}}


id: GO:0031485
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XV myosin heavy chain and associated light chains. Myosin XV is single headed, and has a large extension (1200aa) at the N-terminus of the motor domain, two IQ motifs and a tail with a similar domain structure to that of the tail of myosin VII.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin XV complex","termid":"GO:0031485"}


id: MONDO:0027929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic polycythemia (obsolete MONDO:0027929)","secondary_identifiers":["Orphanet:250165"],"termid":"MONDO:0027929","xrefs":{"Monarch":{"xref_id":"0027929"}}}


id: PBO:0036236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberin, GTPase activator Tsc2","termid":"PBO:0036236"}


id: PBO:0050095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 5","termid":"PBO:0050095"}


id: GO:0007552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biological process in which an animal physically develops after birth or hatching, involving a conspicuous and relatively abrupt change in the animal's form or structure. Examples include the change from tadpole to frog, and the change from larva to adult. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:sensu","ISBN:0198506732","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metamorphosis","secondary_identifiers":["GO:0046698","Wikipedia:Metamorphosis","GO:0046699"],"termid":"GO:0007552"}


id: GO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chlorate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"chlorate transport","termid":"GO:0015702"}


id: MONDO:0014821
data:
  {"annotated_genes":["SJAG_00893"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86181],"is_not":false,"summary":null,"term":"MONDO:0014821"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00893":null},"genotype_count":0,"is_obsolete":false,"name":"complex lethal osteochondrodysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17807","OMIM:616897","UMLS:C4225162","MEDGEN:900688","Orphanet:457378"],"synonyms":[{"name":"Complex lethal osteochondrodysplasia, Symoens-Barnes-Gistelinck type","type":"exact"},{"name":"OCLSBG","type":"related"},{"name":"osteochondrodysplasia, COMPLEX lethal, Symoens-Barnes-Gistelinck type","type":"related"},{"name":"osteochondrodysplasia, Complex lethal, Symoens-Barnes-Gistelinck type","type":"related"}],"termid":"MONDO:0014821","terms_by_termid":{"MONDO:0014821":null},"xrefs":{"Monarch":{"xref_id":"0014821"}}}


id: SO:0001882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, caused by an alteration of the genomic sequence, where a deletion fuses genomic features.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_variant","termid":"SO:0001537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_fusion","synonyms":[{"name":"feature fusion","type":"exact"}],"termid":"SO:0001882"}


id: PBO:0083423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF HUA1/YGR268C","termid":"PBO:0083423"}


id: PBO:0076260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supervillin family member 2, pseudogene","termid":"PBO:0076260"}


id: GO:0009813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonoids, a group of phenolic derivatives containing a flavan skeleton.","definition_xrefs":["ISBN:0198547684","GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid biosynthetic process","secondary_identifiers":["MetaCyc:PWY1F-FLAVSYN","Wikipedia:Flavonoid"],"synonyms":[{"name":"flavonoid anabolism","type":"exact"},{"name":"flavonoid biosynthesis","type":"exact"},{"name":"flavonoid formation","type":"exact"},{"name":"flavonoid synthesis","type":"exact"}],"termid":"GO:0009813"}


id: PATO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's underlying structure not changing over time.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"permanent","synonyms":[{"name":"permanent structure","type":"exact"}],"termid":"PATO:0002293"}


id: PBO:0043208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 1","termid":"PBO:0043208"}


id: GO:0046963
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"}]},"cv_name":"biological_process","definition":"The directed movement of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride synthesized from adenosine 5'-phosphosulfate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulphate transport","type":"exact"},{"name":"PAPS transport","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate transport","type":"exact"}],"termid":"GO:0046963","terms_by_termid":{"GO:1990554":null}}


id: GO:0033363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a secretory granule. A secretory granule is a small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secretory granule organization","synonyms":[{"name":"secretory granule organisation","type":"exact"},{"name":"secretory granule organization and biogenesis","type":"related"}],"termid":"GO:0033363"}


id: PBO:0026775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026775"}


id: PBO:0049491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 1","termid":"PBO:0049491"}


id: PBO:0064950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 1","termid":"PBO:0064950"}


id: GO:2000157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ubiquitin-specific protease (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"},{"relation_name":"is_a","term_name":"regulation of ubiquitin-specific protease activity","termid":"GO:2000152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ubiquitin-specific protease activity","synonyms":[{"name":"negative regulation of UBP","type":"related"},{"name":"negative regulation of UCH2","type":"related"},{"name":"negative regulation of deubiquitinase activity","type":"exact"},{"name":"negative regulation of ubiquitin hydrolase activity","type":"exact"}],"termid":"GO:2000157"}


id: SO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal region that may sustain a double-strand break, resulting in a recombination event.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_breakpoint","secondary_identifiers":["SO:0001242"],"synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:chromosome_breakpoint","type":"exact"},{"name":"aberration breakpoint","type":"exact"},{"name":"aberration_junction","type":"exact"},{"name":"chromosome breakpoint","type":"exact"}],"termid":"SO:0001021"}


id: FYPO:0002894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to calcium ions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during cellular response to calcium ion","synonyms":[{"name":"decreased transcription during cellular response to calcium","type":"exact"},{"name":"decreased transcription during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"decreased transcription in response to calcium","type":"exact"},{"name":"reduced transcription during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0002894"}


id: PBO:0004945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine diphosphorylase Uap1/Qri1(predicted)","termid":"PBO:0004945"}


id: FYPO:0007134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling is normal (i.e. indistinguishable from wild type). SIN signaling is mediated by the small GTPase Ras, and results in the initiation of contraction of the contractile ring at the beginning of cytokinesis and cell division by septum formation.","definition_xrefs":["PomBase:mah","GO:0031028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal septation initiation network signaling","synonyms":[{"name":"normal SIN signaling","type":"exact"},{"name":"normal SIN signalling","type":"exact"},{"name":"normal septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"normal septation initiation network signaling during vegetative growth","type":"exact"},{"name":"normal septation initiation network signalling","type":"exact"},{"name":"normal septation initiation signaling","type":"exact"}],"termid":"FYPO:0007134"}


id: MONDO:0020351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blake pouch cyst is a non-syndromic, usually benign, cystic malformation of the posterior fossa characterized by a midline outpouching of the superior medullary velum into the cisterna magna that results from failure of the rudimental fourth ventricular tela choroidea to regress during embryogenesis. Patients can be asymptomatic or present in childhood or adulthood with clinical manifestations of hydrocephalus, such as headache, hypotonia, vertigo, syncope, vomiting, blurred or double vision, nystagmus, papilledema, and delayed gait development.","definition_xrefs":["Orphanet:98922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic malformation of the posterior fossa","termid":"MONDO:0020134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Blake pouch cyst","secondary_identifiers":["MEDGEN:783279","UMLS:C3662124","GARD:19603"],"termid":"MONDO:0020351","xrefs":{"Monarch":{"xref_id":"0020351"}}}


id: PBO:0064583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member D","termid":"PBO:0064583"}


id: PBO:0068995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 239, pseudogene","termid":"PBO:0068995"}


id: MONDO:1040014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodevelopmental disorder caused by variation in the PPFIA3 gene. This disorder is characterised by developmental delay and intellectual disability. Most patients present variable additional features, including dysmorphisms, microcephaly or macrocephaly, hypotonia, autism spectrum disorder or autistic features, abnormal electroencephalogram, and epilepsy.","definition_xrefs":["PMID:38181735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"PPFIA3-related neurodevelopmental disorder","termid":"MONDO:1040014","xrefs":{"Monarch":{"xref_id":"1040014"}}}


id: FYPO:0000710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle arrest in response to nitrogen starvation, which normally occurs in G1 phase, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal cellular response to nitrogen starvation","termid":"FYPO:0000152"},{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle arrest in response to nitrogen starvation","synonyms":[{"name":"abnormal mitotic cell cycle arrest in response to nitrogen depletion","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in response to nitrogen deprivation","type":"exact"}],"termid":"FYPO:0000710"}


id: MONDO:0005844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eyelid cyst caused by the blockage of a meibomian gland.","definition_xrefs":["NCIT:C26717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal hordeolum","termid":"MONDO:0004917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"chalazion","secondary_identifiers":["MEDGEN:869","SCTID:1482004","icd11.foundation:777918741","DOID:9903","EFO:0007363","MESH:D017043","UMLS:C0007933","ICD9:373.2","ICD10CM:H00.1"],"synonyms":[{"name":"Meibomian cyst","type":"related"},{"name":"chalazia","type":"related"},{"name":"chalazion","type":"exact"},{"name":"cyst, Meibomian","type":"related"},{"name":"meibomian gland lipogranuloma","type":"exact"}],"termid":"MONDO:0005844","xrefs":{"Monarch":{"xref_id":"0005844"}}}


