# terms

id: PR:P87239
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily A member 3, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04315","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ homolog 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.14","secondary_identifiers":["UniProtKB:P87239"],"synonyms":[{"name":"Spom972h-DNAJA3","type":"exact"}],"termid":"PR:P87239"}


id: FYPO:0003061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the two nuclei in a zygote formed by conjugation with cellular fusion undergo meiosis before karyogamy with nuclear fusion is completed.","definition_xrefs":["PomBase:al","PMID:23755176","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"meiotic cell cycle in zygote with unfused nuclei","synonyms":[{"name":"haploid meiosis before karyogamy","type":"exact"},{"name":"twin haploid meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003061"}


id: PR:Q9USH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein psy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.03c","synonyms":[{"name":"Spom972h-psy1","type":"exact"}],"termid":"PR:Q9USH7"}


id: GO:0048097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism, at the level of transcription or post-transcription, maintaining gene activation in the long-term.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete long-term maintenance of gene activation (obsolete GO:0048097)","termid":"GO:0048097"}


id: PATO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000026 carbohydrate composition (obsolete PATO:0000026)","termid":"PATO:0000026"}


id: FYPO:0005887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled in one or more regions of the chromosome away from the centromere. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:vw","PMID:27666591","PomBase:mah","GO:0034080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000641","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"ectopic CENP-A containing chromatin assembly","synonyms":[{"name":"CENP-A containing nucleosome assembly away from centromere","type":"exact"},{"name":"ectopic CENP-A containing nucleosome assembly","type":"related"},{"name":"ectopic CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"ectopic CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"ectopic CENP-A deposition","type":"related"},{"name":"ectopic CENP-A loading","type":"related"},{"name":"ectopic CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"ectopic centromere-specific histone exchange","type":"exact"},{"name":"ectopic centromere-specific nucleosome assembly","type":"exact"},{"name":"ectopic centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"multiple foci of CENP-A","type":"related"}],"termid":"FYPO:0005887"}


id: PBO:0089091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein, human ZCCHC9 ortholog, implicated in mRNA splicing","termid":"PBO:0089091"}


id: MONDO:0019579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discrete papular lichen myxedematosus is a rare chronic, slowly progressive form of localized lichen myxedematosus characterized by the development of a few to multiple small symmetrical skin-coloured mucinous papules on the limbs and trunk.","definition_xrefs":["Orphanet:90394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"discrete papular lichen myxedematosus","secondary_identifiers":["UMLS:C4273967","MEDGEN:898313","SCTID:717258005","GARD:19138"],"termid":"MONDO:0019579","xrefs":{"Monarch":{"xref_id":"0019579"}}}


id: PBO:0057935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3661","termid":"PBO:0057935"}


id: MONDO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of tumor cell lobules with peripheral palisading, and a basophilic staining pattern. More than half of reported cases were associated with the presence of a multilocular thymic cyst. Metastases to lung and liver have been reported in approximately 30% of cases.","definition_xrefs":["NCIT:C6456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"thymus squamous cell carcinoma","termid":"MONDO:0003493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"thymic basaloid carcinoma","secondary_identifiers":["DOID:7050","UMLS:C1332464","MEDGEN:231420"],"synonyms":[{"name":"Thymus basaloid carcinoma","type":"exact"},{"name":"basaloid carcinoma of Thymus","type":"exact"},{"name":"basaloid carcinoma of the Thymus","type":"exact"},{"name":"thymic basaloid carcinoma","type":"exact"},{"name":"thymus basaloid squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004092","xrefs":{"Monarch":{"xref_id":"0004092"}}}


id: GO:0071010
data:
  {"annotated_genes":["SJAG_00058","SJAG_03995","SJAG_01008","SJAG_02558","SJAG_04911","SJAG_03983","SJAG_00474","SJAG_00147","SJAG_00504","SJAG_05240","SJAG_00322","SJAG_02279","SJAG_03210","SJAG_00225","SJAG_01654","SJAG_02844","SJAG_00577","SJAG_02185","SJAG_04318","SJAG_00911","SJAG_02304","SJAG_00859","SJAG_01870","SJAG_00249","SJAG_03547","SJAG_04214","SJAG_04163","SJAG_03469","SJAG_00809","SJAG_01301","SJAG_05009","SJAG_00498"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70401,70822,74405,93719,95513,106197,102058,72476,76223,72726,119015,112960,95933,106724,105837,79910,101566,107260,102861,110366,113582,96667,88857,112673,74258,114153,77057,110952,73504,109813,79214,109080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the 5' splice site and the branch point sequence with specific snRNPs. The prespliceosome includes many proteins in addition to those found in the bound snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation. Prespliceosome complexes are not active for splicing, but are instead an early step in the assembly of a spliceosomal complex.","definition_xrefs":["GOC:krc","PMID:19239890","GOC:ab","GOC:mah","PMID:17332742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02844":null,"SJAG_03210":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"prespliceosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mammalian spliceosomal complex A","type":"narrow"},{"name":"prespliceosomal complex","type":"exact"},{"name":"yeast spliceosomal complex B","type":"narrow"}],"termid":"GO:0071010","terms_by_termid":{"GO:0071004":null}}


id: GO:1905631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11377826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monosaccharide stimulus","termid":"GO:0071326"},{"relation_name":"is_a","term_name":"response to glyceraldehyde","termid":"GO:1905630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glyceraldehyde","termid":"GO:1905631"}


id: GO:0016026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase core (obsolete GO:0016026)","synonyms":[{"name":"proteasome endopeptidase core","type":"exact"}],"termid":"GO:0016026"}


id: MOD:01139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate sodium adduct","termid":"MOD:01139"}


id: PBO:0052001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JAZF1 antisense RNA 1","termid":"PBO:0052001"}


id: PBO:0059844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like","termid":"PBO:0059844"}


id: PBO:0059043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multimerin 2","termid":"PBO:0059043"}


id: PBO:0046762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 3 pseudogene 1","termid":"PBO:0046762"}


id: PBO:0072014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8","termid":"PBO:0072014"}


id: MONDO:0013689
data:
  {"annotated_genes":["SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85991],"is_not":false,"summary":null,"term":"MONDO:0013689"}]},"cv_name":"mondo","definition":"Any 46 XX gonadal dysgenesis in which the cause of the disease is a mutation in the PSMC3IP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18041","MEDGEN:482101","DOID:0080495","UMLS:C3280471","OMIM:614324"],"synonyms":[{"name":"46 XX gonadal dysgenesis caused by mutation in PSMC3IP","type":"exact"},{"name":"ODG3","type":"related"},{"name":"PSMC3IP 46 XX gonadal dysgenesis","type":"exact"},{"name":"ovarian dysgenesis 3","type":"exact"},{"name":"ovarian dysgenesis type 3","type":"exact"}],"termid":"MONDO:0013689","terms_by_termid":{"MONDO:0013689":null},"xrefs":{"Monarch":{"xref_id":"0013689"}}}


id: PBO:0070989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 13","termid":"PBO:0070989"}


id: SO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons AAT and AAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine","synonyms":[{"name":"Asn","type":"exact"},{"name":"N","type":"exact"}],"termid":"SO:0001449"}


id: PBO:0056993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34a","termid":"PBO:0056993"}


id: FYPO:0007903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell lyses during mitotic interphase, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PMID:19189958","PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"cell lysis during mitotic interphase","synonyms":[{"name":"cell lysis during NETO","type":"narrow"},{"name":"vegetative cell lysis during interphase","type":"exact"}],"termid":"FYPO:0007903"}


id: PBO:0082496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of ADA and SAGA histone acetyltransferase complexes; modifies N-terminal lysines on histones H2B and H3; acetylates Rsc4p, a subunit of the RSC chromatin-remodeling complex, altering replication stress tolerance; relocalizes to the cytosol in response to hypoxia; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; greater involvement in repression of RNAPII-dependent transcription than in activation","termid":"PBO:0082496"}


id: GO:0018483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-oxohexanoate + NADP+ + H2O = adipate + NADPH + H+.","definition_xrefs":["EC:1.2.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"6-oxohexanoate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0175","MetaCyc:6-OXOHEXANOATE-OXIDATION-RXN","RHEA:13397"],"synonyms":[{"name":"6-oxohexanoate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0018483"}


id: PBO:0082203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; involved in O- and N-linked protein glycosylation; type II membrane protein; member of the KRE2/MNT1 mannosyltransferase family; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0082203"}


id: MONDO:1010282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Azoospermia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azoospermia, non-human animal","secondary_identifiers":["OMIA:002500"],"termid":"MONDO:1010282","xrefs":{"Monarch":{"xref_id":"1010282"}}}


id: GO:1990564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Covalent attachment of the ubiquitin-like protein UFM1 to a protein, forming an UFM1 chain.","definition_xrefs":["PMID:25219498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein ufmylation","termid":"GO:0071569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein polyufmylation","termid":"GO:1990564"}


id: PBO:0045416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 5 pseudogene 1","termid":"PBO:0045416"}


id: GO:0015861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytidine, cytosine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside transport","termid":"GO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cytidine transport","termid":"GO:0015861"}


id: GO:2000152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulation of ubiquitin-specific protease activity (deubiquitinase) activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ubiquitin-specific protease activity","synonyms":[{"name":"regulation of UBP","type":"related"},{"name":"regulation of UCH2","type":"related"},{"name":"regulation of deubiquitinase activity","type":"exact"}],"termid":"GO:2000152"}


id: GO:0007596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.","definition_xrefs":["PMID:30700128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemostasis","termid":"GO:0007599"},{"relation_name":"is_a","term_name":"coagulation","termid":"GO:0050817"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood coagulation","secondary_identifiers":["Reactome:R-HSA-109582","Wikipedia:Coagulation"],"synonyms":[{"name":"blood clotting","type":"exact"}],"termid":"GO:0007596"}


id: GO:0141128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont superantigen elicits a strong immune response by activating a large number of T cells in a non-specific manner. Unlike conventional antigens, which activate T cells by interacting with specific receptors on the surface of these cells, superantigens can stimulate T cells by binding to regions outside the antigen-binding site. Superantigens can activate a large proportion of T cells, leading to an exaggerated immune response. This excessive activation can result in the release of a large amount of cytokines such as tumor necrosis factor and interleukin-2. The massive cytokine release can lead to an acute toxic shock, causing symptoms such as fever and organ damage.","definition_xrefs":["PMID:12679262","PMID:17427250","PMID:28880920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated non-specific activation of host T-cells","synonyms":[{"name":"symbiont-mediated non-specific T-cell activation in host","type":"exact"},{"name":"symbiont-mediated nonspecific activation of host T-cells","type":"exact"}],"termid":"GO:0141128"}


id: FYPO:0002269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutamate-ammonia ligase activity","termid":"FYPO:0002267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased glutamate-ammonia ligase activity","synonyms":[{"name":"decreased GS activity","type":"exact"},{"name":"decreased glutamine synthetase activity","type":"exact"},{"name":"decreased glutamylhydroxamic synthetase activity","type":"exact"},{"name":"reduced glutamate-ammonia ligase activity","type":"exact"}],"termid":"FYPO:0002269"}


id: PBO:0060598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin II complex subunit D3","termid":"PBO:0060598"}


id: PBO:0057027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-3","termid":"PBO:0057027"}


id: GO:0061223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchymal cell differentiation","termid":"GO:0061223"}


id: GO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of o-xylene, (1,2-dimethylbenzene) a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"o-xylene metabolic process","termid":"GO:0018950"},{"relation_name":"is_a","term_name":"xylene catabolic process","termid":"GO:0042184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"o-xylene catabolic process","synonyms":[{"name":"o-xylene breakdown","type":"exact"},{"name":"o-xylene catabolism","type":"exact"},{"name":"o-xylene degradation","type":"exact"},{"name":"ortho-xylene catabolic process","type":"exact"},{"name":"ortho-xylene catabolism","type":"exact"}],"termid":"GO:0042186"}


id: PBO:0078936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 4-1","termid":"PBO:0078936"}


id: PBO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Faf1 (predicted)","termid":"PBO:0001760"}


id: GO:1905385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to presynapse.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bf","PMID:24449494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to presynapse","termid":"GO:1905384"},{"relation_name":"negatively_regulates","term_name":"protein localization to presynapse","termid":"GO:1905383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to presynapse","synonyms":[{"name":"down regulation of protein localisation in presynapse","type":"exact"},{"name":"down regulation of protein localisation to presynapse","type":"exact"},{"name":"down regulation of protein localization in presynapse","type":"exact"},{"name":"down regulation of protein localization to presynapse","type":"exact"},{"name":"down regulation of recruitment of presynaptic proteins","type":"exact"},{"name":"down-regulation of protein localisation in presynapse","type":"exact"},{"name":"down-regulation of protein localisation to presynapse","type":"exact"},{"name":"down-regulation of protein localization in presynapse","type":"exact"},{"name":"down-regulation of protein localization to presynapse","type":"exact"},{"name":"down-regulation of recruitment of presynaptic proteins","type":"exact"},{"name":"downregulation of protein localisation in presynapse","type":"exact"},{"name":"downregulation of protein localisation to presynapse","type":"exact"},{"name":"downregulation of protein localization in presynapse","type":"exact"},{"name":"downregulation of protein localization to presynapse","type":"exact"},{"name":"downregulation of recruitment of presynaptic proteins","type":"exact"},{"name":"inhibition of protein localisation in presynapse","type":"narrow"},{"name":"inhibition of protein localisation to presynapse","type":"narrow"},{"name":"inhibition of protein localization in presynapse","type":"narrow"},{"name":"inhibition of protein localization to presynapse","type":"narrow"},{"name":"inhibition of recruitment of presynaptic proteins","type":"narrow"},{"name":"negative regulation of protein localisation in presynapse","type":"exact"},{"name":"negative regulation of protein localisation to presynapse","type":"exact"},{"name":"negative regulation of protein localization in presynapse","type":"exact"},{"name":"negative regulation of recruitment of presynaptic proteins","type":"exact"}],"termid":"GO:1905385"}


id: PBO:0080406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 36 homolog","termid":"PBO:0080406"}


id: GO:0061485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a memory T cell population by cell division.","definition_xrefs":["PMID:14647273","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell proliferation","termid":"GO:0061485"}


id: MONDO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute life-threatening systemic bacterial noncontagious illness caused by exotoxins from bacteria of either the Streptococcus pyogenes or Staphylococcus aureus type. It is characterized by high fever, hypotension, rash, multi-organ dysfunction, and cutaneous desquamation during the early convalescent period. The toxins affect the host immune system, causing an exuberant and pathological host inflammatory response. Laboratory findings include leukocytosis, elevated prothrombin time, hypoalbuminemia, hypocalcemia, and pyuria.","definition_xrefs":["NCIT:C35498","Wikipedia:Toxic_shock_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic shock syndrome","secondary_identifiers":["icd11.foundation:114886962","MESH:D012772","DOID:14115","GARD:9560","ICD9:040.82","ICD10CM:A48.3","SCTID:18504008","Orphanet:36234","UMLS:C0600327","NORD:1782","MEDGEN:109414"],"synonyms":[{"name":"TSS","type":"exact"},{"name":"TSS, toxic shock syndrome","type":"exact"},{"name":"bacterial TSS","type":"exact"},{"name":"bacterial toxic-shock syndrome","type":"exact"},{"name":"shock syndrome (TSS), toxic","type":"exact"},{"name":"staphylococcal toxic shock syndrome","type":"related"},{"name":"syndrome (TSS), toxic shock","type":"exact"},{"name":"toxic shock","type":"exact"},{"name":"toxic shock syndrome","type":"exact"},{"name":"toxic shock syndrome, (TSS)","type":"exact"}],"termid":"MONDO:0001881","xrefs":{"Monarch":{"xref_id":"0001881"}}}


id: PBO:0042852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP61 antisense RNA 1","termid":"PBO:0042852"}


id: GO:0019320
data:
  {"annotated_genes":["SJAG_02950","SJAG_02796","SJAG_02135","SJAG_00839","SJAG_02369","SJAG_04495","SJAG_04334","SJAG_03373","SJAG_00461","SJAG_02009","SJAG_00605","SJAG_02945","SJAG_01310","SJAG_03818","SJAG_03903","SJAG_02954","SJAG_03828","SJAG_03660","SJAG_02107","SJAG_00027","SJAG_06622","SJAG_04192","SJAG_02951","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78210,103700,94861,106149,106148,109707,109704,116650,105778,109706,109705,105780,105779,109702,98592,95350,109701,98321,103956,109703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[114023,114017,114035,114024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"hexose catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"hexose breakdown","type":"exact"},{"name":"hexose catabolism","type":"exact"},{"name":"hexose degradation","type":"exact"}],"termid":"GO:0019320","terms_by_termid":{"GO:0033499":null,"GO:0061621":null}}


id: FYPO:0001026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs is abnormal (does not occur, or occurs abnormally).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}


id: PBO:0075873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL1 pseudogene 1","termid":"PBO:0075873"}


id: MONDO:0036595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant sex cord-stromal tumor arising from the ovary. It is characterized by the presence of neoplastic Leydig cells. Signs and symptoms include hirsutism, menorrhagia and metrorrhagia. It may be associated with trisomy 8.","definition_xrefs":["NCIT:C2880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sertoli-stromal cell tumor","termid":"MONDO:0020807"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian Sertoli-Leydig cell tumor","secondary_identifiers":["MEDGEN:2038","SCTID:254866007","UMLS:C0003810"],"synonyms":[{"name":"Sertoli-Leydig cell tumor of ovary","type":"exact"},{"name":"Sertoli-Leydig cell tumor of the ovary","type":"exact"},{"name":"Sertoli-Leydig cell tumour of ovary","type":"exact"},{"name":"Sertoli-Leydig cell tumour of the ovary","type":"exact"},{"name":"Sertoli-Leydig neoplasm of ovary","type":"exact"},{"name":"Sertoli-Leydig neoplasm of the ovary","type":"exact"},{"name":"androblastoma","type":"exact"},{"name":"arrhenoblastoma","type":"exact"},{"name":"ovarian Sertoli-Leydig cell neoplasm","type":"exact"},{"name":"ovarian Sertoli-Leydig cell tumor","type":"exact"}],"termid":"MONDO:0036595","xrefs":{"Monarch":{"xref_id":"0036595"}}}


id: PBO:0056226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member E2","termid":"PBO:0056226"}


id: PBO:0070190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 110 pseudogene","termid":"PBO:0070190"}


id: PBO:0004895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin Spn3","termid":"PBO:0004895"}


id: MONDO:0032770
data:
  {"annotated_genes":["SJAG_02869","SJAG_01016","SJAG_03579"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87515,87516,87517],"is_not":false,"summary":null,"term":"MONDO:0032770"}]},"cv_name":"mondo","definition":"Any BAFopathy in which the cause of the disease is a mutation in the ACTL6B gene.","definition_xrefs":["MONDO:patterns/OMIM_disease_series_by_gene","PMID:30580808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01016":null,"SJAG_02869":null,"SJAG_03579":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with severe speech and ambulation defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193115","MEDGEN:1682234","GARD:18518","OMIM:618470"],"synonyms":[{"name":"ACTL6B-related BAFopathy","type":"exact"},{"name":"IDDSSAD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH SEVERE SPEECH AND AMBULATION DEFECTS","type":"related"}],"termid":"MONDO:0032770","terms_by_termid":{"MONDO:0032770":null},"xrefs":{"Monarch":{"xref_id":"0032770"}}}


id: GO:0035647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 3-oxo-delta-4,5-steroid + NADPH + H+ = a 5-beta-3-oxo-steroid + NADP+.","definition_xrefs":["GOC:kad","MetaCyc:RXN-9726","PMID:19166903"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-delta(4,5)-steroid 5-beta-reductase activity (obsolete GO:0035647)","synonyms":[{"name":"3-oxo-delta4,5-steroid 5beta-reductase","type":"exact"}],"termid":"GO:0035647"}


id: PBO:0066178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 4","termid":"PBO:0066178"}


id: MOD:00032
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is not chemically categorized.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification","termid":"MOD:00000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncategorized protein modification","termid":"MOD:00032"}


id: MONDO:1011303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mammary gland disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mammary gland disorder, non-human animal","termid":"MONDO:1011303","xrefs":{"Monarch":{"xref_id":"1011303"}}}


id: PBO:0028963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiotic_interphase_before_premeiotic_DNA_replication","termid":"PBO:0028963"}


id: MONDO:0004718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"noninfectious dermatoses of eyelid","termid":"MONDO:0002137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"xeroderma of eyelid","secondary_identifiers":["MEDGEN:509834","icd11.foundation:144401595","SCTID:55846006","ICD9:373.33","UMLS:C0155179","DOID:9140"],"termid":"MONDO:0004718","xrefs":{"Monarch":{"xref_id":"0004718"}}}


id: FYPO:0007475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body begins later than normal.","definition_xrefs":["PMID:23333317","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein localization to mitotic spindle pole body","synonyms":[{"name":"delayed onset of protein localization to mitotic SPB","type":"exact"},{"name":"delayed onset of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"delayed protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0007475"}


id: MONDO:0859276
data:
  {"annotated_genes":["SJAG_04994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86218],"is_not":false,"summary":null,"term":"MONDO:0859276"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04994":null},"genotype_count":0,"is_obsolete":false,"name":"primordial dwarfism-immunodeficiency-lipodystrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823971","OMIM:620005","UMLS:C5774198"],"termid":"MONDO:0859276","terms_by_termid":{"MONDO:0859276":null},"xrefs":{"Monarch":{"xref_id":"0859276"}}}


id: GO:0045972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone secretion","termid":"GO:0007558"},{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone secretion","termid":"GO:0045443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of juvenile hormone secretion","synonyms":[{"name":"down regulation of juvenile hormone secretion","type":"exact"},{"name":"down-regulation of juvenile hormone secretion","type":"exact"},{"name":"downregulation of juvenile hormone secretion","type":"exact"},{"name":"inhibition of juvenile hormone secretion","type":"narrow"}],"termid":"GO:0045972"}


id: MONDO:0007779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of Opitz G/BBB syndrome.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant Opitz G/BBB syndrome (obsolete MONDO:0007779)","secondary_identifiers":["OMIM:145410","Orphanet:306588"],"synonyms":[{"name":"ADOS","type":"exact"},{"name":"BBB syndrome","type":"related"},{"name":"G syndrome","type":"related"},{"name":"GBBB syndrome","type":"related"},{"name":"GBBB2","type":"related"},{"name":"Opitz Bbbg syndrome","type":"related"},{"name":"Opitz G/BBB syndrome, autosomal dominant","type":"exact"},{"name":"Opitz GBBB syndrome, autosomal dominant","type":"related"},{"name":"Opitz GBBB syndrome, type 2","type":"related"},{"name":"Opitz GBBB syndrome, type II","type":"related"},{"name":"Opitz oculogenitolaryngeal syndrome, type 2","type":"related"},{"name":"Opitz-Frias syndrome","type":"related"},{"name":"Opitz-G syndrome, type 2","type":"related"},{"name":"autosomal dominant Opitz BBB/G syndrome","type":"exact"},{"name":"autosomal dominant Opitz syndrome","type":"exact"},{"name":"chromosome 22Q11.2 deletion syndrome, Opitz phenotype","type":"related"},{"name":"hypertelorism with esophageal Abnormality and hypospadias","type":"related"},{"name":"hypertelorism-hypospadias syndrome","type":"related"},{"name":"hypospadias-dysphagia syndrome","type":"related"},{"name":"telecanthus with associated abnormalities","type":"related"},{"name":"telecanthus-hypospadias syndrome","type":"related"}],"termid":"MONDO:0007779","xrefs":{"Monarch":{"xref_id":"0007779"}}}


id: PBO:0059085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MON2 homolog, regulator of endosome-to-Golgi trafficking","termid":"PBO:0059085"}


id: MONDO:0011909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant intermediate Charcot-Marie-Tooth disease type D is a rare hereditary motor and sensory neuropathy characterized by intermediate motor median nerve conduction velocities (usually between 25 and 45 m/s) and signs of both axonal degeneration and demyelination without onion bulbs in nerve biopsies. It presents with usual Charcot-Marie-Tooth disease clinical features of variable severity (progressive muscle weakness and atrophy of the distal extremities, distal sensory loss, reduced or absent deep tendon reflexes, and feet deformities). Other findings in some of the families include debilitating neuropathic pain and mild postural/kinetic upper limb tremor.","definition_xrefs":["Orphanet:100046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease dominant intermediate D","secondary_identifiers":["MESH:C564333","SCTID:765747004","OMIM:607791","UMLS:C1843075","GARD:9207","MEDGEN:334318","DOID:0110200"],"synonyms":[{"name":"CMTDID","type":"exact"},{"name":"Charcot Marie Tooth disease dominant intermediate 3","type":"related"},{"name":"Charcot-Marie-Tooth disease caused by mutation in MPZ","type":"exact"},{"name":"Charcot-Marie-Tooth disease dominant intermediate type D","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant Intermediate type D","type":"exact"},{"name":"Charcot-Marie-Tooth disease, dominant intermediate D","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy dominant intermediate D","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, dominant Intermediate D","type":"related"},{"name":"DI-CMTD","type":"exact"},{"name":"Di-Cmtd","type":"related"},{"name":"MPZ Charcot-Marie-Tooth disease","type":"exact"},{"name":"MPZ-related intermediate Charcot-Marie-Tooth neuropathy","type":"related"},{"name":"autosomal dominant intermediate Charcot-Marie-Tooth disease type D","type":"exact"}],"termid":"MONDO:0011909","xrefs":{"Monarch":{"xref_id":"0011909"}}}


id: FYPO:0001208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"substance absent from cell during vegetative growth","synonyms":[{"name":"substance absent from cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001208"}


id: PBO:0048597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone receptor","termid":"PBO:0048597"}


id: GO:2001165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001165)","termid":"GO:2001165"}


id: PBO:0090615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1","termid":"PBO:0090615"}


id: PBO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1 (predicted)","termid":"PBO:0013796"}


id: PBO:0003638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR8 family","termid":"PBO:0003638"}


id: PBO:0001662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L28 (predicted)","termid":"PBO:0001662"}


id: MONDO:0004632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An obsolete term referring to Hodgkin lymphoma.","definition_xrefs":["NCIT:C6914"],"gene_count":0,"genotype_count":0,"name":"obsolete Hodgkin's granuloma (obsolete MONDO:0004632)","secondary_identifiers":["ICD9:201.4","ICD9:201.1","ICDO:9661/3","ICD9:201.7","SCTID:118609008","NCIT:C26956","ICD9:201","ICD9:201.2","ICD9:201.9","ICD9:201.0","SCTID:118607005","SCTID:118602004","NCIT:C3517","NCIT:C6913","ICD9:201.6","SCTID:118610003","DOID:8651"],"synonyms":[{"name":"Hodgkin granuloma","type":"exact"},{"name":"Hodgkin's granuloma","type":"exact"},{"name":"Hodgkin's granuloma of unspecified site","type":"exact"},{"name":"Hodgkin's granuloma, unspecified site, extranodal and solid organ sites","type":"exact"}],"termid":"MONDO:0004632","xrefs":{"Monarch":{"xref_id":"0004632"}}}


id: GO:0002580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen (peptide or polysaccharide) via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of peptide or polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002580"}


id: FYPO:0003910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of retrotransposon nucleocapsid complexes (also called virus-like particles, VLPs) to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished VLP localization to nucleus during vegetative growth","synonyms":[{"name":"VLP localization to nucleus abolished during vegetative growth","type":"exact"},{"name":"abolished VLP localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization in nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization to nucleus during vegetative growth during mitotic cell cycle","type":"related"},{"name":"abolished retrotransposon nucleocapsid localization to nucleus during vegetative growth","type":"exact"},{"name":"abolished virus-like particle localization to nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0003910"}


id: GO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integral membrane complex that possesses NADH oxidoreductase activity. The complex is one of the components of the electron transport chain. It catalyzes the transfer of a pair of electrons from NADH to a quinone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NADH dehydrogenase complex","secondary_identifiers":["GO:0030025","GO:0030966","GO:0031675","GO:0045280","Wikipedia:NADH_dehydrogenase","GO:0031677","GO:0031678"],"synonyms":[{"name":"NADH dehydrogenase complex (plastoquinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (quinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"narrow"},{"name":"NADH:plastoquinone reductase complex","type":"narrow"},{"name":"plastid NADH dehydrogenase complex (plastoquinone)","type":"narrow"}],"termid":"GO:0030964"}


id: GO:0035153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of epithelial cells within each migrating branch in an open tracheal system to distinct tracheal cell fates. During the migration phase each branch forms a well-defined number of cell types (including fusion cells, terminal cells and branch cells) at precise positions.","definition_xrefs":["PMID:11063940","GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell type specification, open tracheal system","synonyms":[{"name":"tracheal cell type specification","type":"broad"},{"name":"tracheal epithelial cell type specification","type":"exact"}],"termid":"GO:0035153"}


id: MONDO:0017811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 5","termid":"MONDO:0016904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe neonatal hypotonia-seizures-encephalopathy syndrome due to 5q31.3 microdeletion","secondary_identifiers":["MEDGEN:1636705","GARD:21383","SCTID:768555009","Orphanet:314655","UMLS:C4708510"],"synonyms":[{"name":"5q31.3 microdeletion syndrome","type":"exact"},{"name":"Del(5)(q31.3)","type":"exact"},{"name":"monosomy 5q31.3","type":"exact"}],"termid":"MONDO:0017811","xrefs":{"Monarch":{"xref_id":"0017811"}}}


id: GO:0016720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = a (9Z)-octadec-9-en-12-ynoyl-containing glycerolipid + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl-lipid Delta(12)-acetylenase","secondary_identifiers":["MetaCyc:1.14.99.33-RXN","EC:1.14.19.39","KEGG_REACTION:R05740"],"synonyms":[{"name":"D12-fatty acid dehydrogenase activity","type":"exact"},{"name":"Delta12 fatty acid acetylenase","type":"exact"},{"name":"delta12-fatty acid dehydrogenase activity","type":"related"},{"name":"linoleate delta-12-fatty acid acetylenase (desaturase) activity","type":"exact"}],"termid":"GO:0016720"}


id: GO:0050779
data:
  {"annotated_genes":["SJAG_03745","SJAG_00391","SJAG_02239","SJAG_05322","SJAG_00759","SJAG_04350","SJAG_01696","SJAG_02808","SJAG_01944","SJAG_00854","SJAG_01191","SJAG_02622","SJAG_04825","SJAG_01625","SJAG_03597","SJAG_00285","SJAG_00966","SJAG_01818","SJAG_05010","SJAG_03179","SJAG_03157","SJAG_16457","SJAG_01053","SJAG_01910","SJAG_05694","SJAG_03876","SJAG_04118","SJAG_03883","SJAG_02213","SJAG_04818","SJAG_04084","SJAG_03113","SJAG_02370","SJAG_02540","SJAG_04880","SJAG_02036","SJAG_04153","SJAG_00343","SJAG_01521","SJAG_04824","SJAG_04321","SJAG_04407","SJAG_04006","SJAG_02383","SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[77928,74679,80024,112310,76141,58572],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[118410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[92009],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[96248,116185,107770,106785,118600,115746,92587,97574,105584,93419,102401,104719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[115447,76959,100254,79879,98467,60178,70881,98381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[92940,90127,74125,70707,94672,95841,116901,79301,91122,115959,75881,77939,80062,92842],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[92010],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[66774,117527,91123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"}]},"cv_name":"biological_process","definition":"Any process that decreases the stability of an RNA molecule, making it more vulnerable to degradative processes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"positively_regulates","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02622":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA destabilization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0050779","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0060212":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:1990074":null}}


id: MONDO:0010038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Growth delay due to IGF-I resistance is characterized by variable intrauterine and postnatal growth retardation and elevated serum IGF-I levels. Addition features include variable degrees of intellectual deficit, microcephaly and dysmorphism (broad nasal bridge and tip, smooth philtrum, thin upper and everted lower lips, short fingers, clinodactyly, wide-set nipples and pectus excavatum).","definition_xrefs":["Orphanet:73273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth delay due to insulin-like growth factor I resistance","secondary_identifiers":["MESH:C564816","GARD:10609","SCTID:715625007","icd11.foundation:272435490","NANDO:2200320","OMIM:270450","MEDGEN:338622","UMLS:C1849157"],"synonyms":[{"name":"IGF-1 resistance","type":"related"},{"name":"IGF-I resistance","type":"related"},{"name":"IGF1RES","type":"related"},{"name":"Somatomedin end-organ insensitivity to","type":"related"},{"name":"Somatomedin, end-organ insensitivity to","type":"related"},{"name":"Somatomedin-C, resistance to","type":"related"},{"name":"Somatomedin-c resistance to","type":"related"},{"name":"growth delay due to insulin-like growth factor I resistance","type":"exact"},{"name":"insulin-like Growth Factor I, resistance to, due to increased binding Protein","type":"related"},{"name":"insulin-like growth factor 1 resistance to","type":"related"},{"name":"insulin-like growth factor I, resistance to","type":"related"},{"name":"resistance to IGF-1","type":"exact"}],"termid":"MONDO:0010038","xrefs":{"Monarch":{"xref_id":"0010038"}}}


id: PR:P57728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P57728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.11","synonyms":[{"name":"Spom972h-rpl2801","type":"exact"}],"termid":"PR:P57728"}


id: MONDO:1030001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to","secondary_identifiers":["OMIMPS:607631"],"termid":"MONDO:1030001","xrefs":{"Monarch":{"xref_id":"1030001"}}}


id: PBO:0042655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 4","termid":"PBO:0042655"}


id: MONDO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the respiratory system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory system benign neoplasm","secondary_identifiers":["MEDGEN:635669","SCTID:255166003","NCIT:C8531","DOID:0050621","UMLS:C0497556"],"synonyms":[{"name":"respiratory system benign neoplasm","type":"exact"}],"termid":"MONDO:0000382","xrefs":{"Monarch":{"xref_id":"0000382"}}}


id: PBO:0045674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 light intermediate chain 2","termid":"PBO:0045674"}


id: PBO:0003465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase gamma subunit (predicted)","termid":"PBO:0003465"}


id: SO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer that drives the pattern of transcription and binds to the same TF as the primary enhancer, but is located in the intron of or on the far side of a neighboring gene.","definition_xrefs":["PMID:22083793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow_enhancer","synonyms":[{"name":"shadow enhancer","type":"exact"}],"termid":"SO:0001482"}


id: PBO:0083814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential SNARE protein localized to the ER; involved in retrograde traffic from the Golgi to the ER and Sey1p-independent homotypic ER fusion; required for efficient nuclear fusion during mating; forms a complex with the SNAREs Sec22p, Sec20p and Ufe1p","termid":"PBO:0083814"}


id: MONDO:1040011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A human disorder which results from a tear in one of the major cervicocerebral arteries, allowing blood to enter the wall of the artery and split its layers. Pathogenesis typically leads to either stenosis or aneurysmal dilatation of the vessel.","definition_xrefs":["PMID:19096659","PMID:28722857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical artery dissection","termid":"MONDO:0006061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery dissection","synonyms":[{"name":"VAD","type":"exact"}],"termid":"MONDO:1040011","xrefs":{"Monarch":{"xref_id":"1040011"}}}


id: PBO:0063315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain containing 2","termid":"PBO:0063315"}


id: PBO:0053129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactase","termid":"PBO:0053129"}


id: MOD:00316
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4,N4-dimethyl-L-asparagine.","definition_xrefs":["PubMed:14570711","PubMed:8783012","PubMed:12964758","RESID:AA0311","Unimod:36#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"methylated asparagine","termid":"MOD:00673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N4,N4-dimethyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(dimethylamino)-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4,N4-dimethylbutanediamic acid","type":"exact"},{"name":"Dimethyl","type":"related"},{"name":"MOD_RES N4,N4-dimethylasparagine","type":"exact"},{"name":"N(gamma),N(gamma)-dimethylasparagine","type":"exact"},{"name":"N4,N4-dimethyl-L-asparagine","type":"exact"},{"name":"N4,N4-dimethylated L-asparagine","type":"exact"},{"name":"N4Me2Asn","type":"exact"},{"name":"beta-dimethylasparagine","type":"related"},{"name":"di-Methylation","type":"related"}],"termid":"MOD:00316"}


id: PBO:0004354
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.153","termid":"PBO:0004354"}


id: GO:0047129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-2-[(R)-1-carboxyethylamino]pentanoate + H2O + NAD+ = L-2-aminopentanoate + H+ + NADH + pyruvate.","definition_xrefs":["EC:1.5.1.28","RHEA:21592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"opine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03732","MetaCyc:1.5.1.28-RXN"],"synonyms":[{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate dehydrogenase (NAD, L-aminopentanoate-forming)","type":"related"},{"name":"(2S)-2-{[1-(R)-carboxyethyl]amino}pentanoate:NAD+ oxidoreductase (L-aminopentanoate-forming)","type":"related"}],"termid":"GO:0047129"}


id: MONDO:1012010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal amyloidosis, non-human animal","termid":"MONDO:1011903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal amyloidosis, domestic cat","secondary_identifiers":["OMIA:000040-9685"],"termid":"MONDO:1012010","xrefs":{"Monarch":{"xref_id":"1012010"}}}


id: PBO:0074716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 77","termid":"PBO:0074716"}


id: GO:0015823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phenylalanine, 2-amino-3-phenylpropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phenylalanine transport","synonyms":[{"name":"L-phenylalanine transport","type":"narrow"}],"termid":"GO:0015823"}


id: MONDO:0002818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenal cortical adenocarcinoma (obsolete MONDO:0002818)","termid":"MONDO:0002818","xrefs":{"Monarch":{"xref_id":"0002818"}}}


id: FYPO:0003876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the cytokinesis after mitosis checkpoint of a mitotic cell cycle is normal (i.e. indistinguishable from wild type). The cytokinesis after mitosis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000631","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cytokinesis checkpoint","synonyms":[{"name":"normal cytokinesis after mitosis checkpoint","type":"exact"},{"name":"normal cytokinesis checkpoint activation","type":"related"},{"name":"normal mitotic cell cycle cytokinesis checkpoint","type":"exact"},{"name":"normally activated cytokinesis checkpoint","type":"related"}],"termid":"FYPO:0003876"}


id: PBO:0072566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRBP1 pseudogene 1","termid":"PBO:0072566"}


id: PBO:0081924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 962, pseudogene","termid":"PBO:0081924"}


id: PBO:0082644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of RNA polymerase II general transcription factor TFIIH; involved in transcription initiation and in nucleotide-excision repair; relocalizes to the cytosol in response to hypoxia; homolog of Chlamydomonas reinhardtii REX1-S protein involved in DNA repair","termid":"PBO:0082644"}


id: PBO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 14 pseudogene","termid":"PBO:0062083"}


id: PBO:0089426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein, involved in splicing","termid":"PBO:0089426"}


id: PBO:0068731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 2, pseudogene","termid":"PBO:0068731"}


id: MOD:00618
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:299#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan carboxylation","synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:00618"}


id: GO:0009563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of a synergid cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid differentiation","synonyms":[{"name":"synergid cell differentiation","type":"exact"}],"termid":"GO:0009563"}


id: GO:0120034
data:
  {"annotated_genes":["SJAG_02379","SJAG_01794","SJAG_04509","SJAG_00514","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93822,91187,90208,111673,88236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"positively_regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120034","terms_by_termid":{"GO:1902917":null}}


id: PBO:0054853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2267","termid":"PBO:0054853"}


id: PBO:0068092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 399","termid":"PBO:0068092"}


id: FYPO:0001946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic sister chromatid separation","synonyms":[{"name":"abolished mitotic chromosome separation","type":"exact"},{"name":"absent mitotic sister chromatid separation","type":"exact"},{"name":"mitotic sister chromatid separation abolished","type":"exact"}],"termid":"FYPO:0001946"}


id: FYPO:0000917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of citrate (Si)-synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal citrate (Si)-synthase activity","synonyms":[{"name":"abnormal citrate synthase activity","type":"broad"}],"termid":"FYPO:0000917"}


id: FYPO:0004559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, is shaped in the form of a spheroid, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"},{"relation_name":"is_a","term_name":"viable spheroid vegetative cell","termid":"FYPO:0002380"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable swollen spheroid vegetative cell","synonyms":[{"name":"viable enlarged spheroid vegetative cell","type":"related"},{"name":"viable enlarged volume spheroid vegetative cell","type":"exact"},{"name":"viable large spheroid vegetative cell","type":"related"},{"name":"viable swollen rounded vegetative cell","type":"exact"},{"name":"viable swollen spheroid cell during vegetative growth","type":"exact"},{"name":"viable swollen spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004559"}


id: MONDO:0007128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annular erythema","secondary_identifiers":["SCTID:200920000","icd11.foundation:958930318","OMIM:106500","MEDGEN:68608","MESH:C562461","UMLS:C0234906"],"synonyms":[{"name":"annular erythema","type":"exact"}],"termid":"MONDO:0007128","xrefs":{"Monarch":{"xref_id":"0007128"}}}


id: PBO:0080294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 58 pseudogene","termid":"PBO:0080294"}


id: PomGeneEx:0000022
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"absent","termid":"PomGeneEx:0000006"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein absent","synonyms":[{"name":"protein expression absent","type":"exact"}],"termid":"PomGeneEx:0000022"}


id: PATO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000542 absolute photosensitivity value (obsolete PATO:0000542)","termid":"PATO:0000542"}


id: PBO:0005264
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.24","termid":"PBO:0005264"}


id: PBO:0087737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; the SMC5-SMC6 complex plays a key role in the removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; homologous to S. pombe rad18","termid":"PBO:0087737"}


id: GO:0018756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ammeline + H2O = ammelide + NH3.","definition_xrefs":["PMID:1991731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ammeline aminohydrolase activity","secondary_identifiers":["MetaCyc:RXN-8016","RHEA:26201"],"termid":"GO:0018756"}


id: PBO:0031265
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_conjugation","termid":"PBO:0031265"}


id: PBO:0074975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-17","termid":"PBO:0074975"}


id: PBO:0001171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Isoleucine","termid":"PBO:0001171"}


id: MONDO:1011229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, cattle","secondary_identifiers":["OMIA:000337-9913"],"termid":"MONDO:1011229","xrefs":{"Monarch":{"xref_id":"1011229"}}}


id: PBO:0075698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF2 antisense RNA 1","termid":"PBO:0075698"}


id: MONDO:0009521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","secondary_identifiers":["UMLS:C1855505","MESH:C565441","OMIM:246470","MEDGEN:383699"],"synonyms":[{"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","type":"exact"}],"termid":"MONDO:0009521","xrefs":{"Monarch":{"xref_id":"0009521"}}}


id: PBO:0068168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 475","termid":"PBO:0068168"}


id: MONDO:0022314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Hernandez Aguirre-Negrete syndrome (obsolete MONDO:0022314)","termid":"MONDO:0022314","xrefs":{"Monarch":{"xref_id":"0022314"}}}


id: GO:0045201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of cell polarity","termid":"GO:0030011"},{"relation_name":"is_a","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of neuroblast polarity","secondary_identifiers":["GO:0043341","GO:0043344"],"synonyms":[{"name":"maintenance of neuroblast cell polarity","type":"exact"}],"termid":"GO:0045201"}


id: PBO:0085458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potential noncatalytic subunit for phospholipid translocase Dnf3p; YNR048W has a paralog, CDC50, that arose from the whole genome duplication","termid":"PBO:0085458"}


id: PBO:0051195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-13 (non-functional)","termid":"PBO:0051195"}


id: FYPO:0003243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth the occurrence of splicing of introns longer than about 45 nucleotides is decreased.","definition_xrefs":["PMID:23754748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA splicing","termid":"FYPO:0003040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased splicing of long introns","synonyms":[{"name":"decreased splicing of long introns during mitotic cell cycle","type":"related"},{"name":"decreased splicing of long introns during vegetative growth","type":"exact"},{"name":"reduced splicing of long introns","type":"exact"}],"termid":"FYPO:0003243"}


id: PBO:0082980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic type 2C protein phosphatase (PP2C); identified as a high-copy number suppressor of cnb1 mpk1 synthetic lethality; overexpression decreases high-osmolarity induced Hog1p phosphorylation and kinase activity","termid":"PBO:0082980"}


id: PBO:0087068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33B; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33B has a paralog, RPL33A, that arose from the whole genome duplication","termid":"PBO:0087068"}


id: MOD:00874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to isoglutamyl glutamyl-glutamyl-glutamic acid, forming an isopeptide bond with a triglutamic acid.","definition_xrefs":["PubMed:10747868","PubMed:1680872","Unimod:452","RESID:AA0202#var","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-isoglutamyl-polyglutamic acid","termid":"MOD:00207"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl triglutamic acid","synonyms":[{"name":"GluGluGlu","type":"related"},{"name":"N alpha -(gamma-Glutamyl)-Glu3","type":"exact"},{"name":"triglutamyl","type":"related"}],"termid":"MOD:00874"}


id: GO:0005377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular copper ion transporter (obsolete GO:0005377)","synonyms":[{"name":"intracellular copper ion transporter","type":"exact"},{"name":"intracellular copper transporter","type":"exact"}],"termid":"GO:0005377"}


id: PBO:0062968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 11","termid":"PBO:0062968"}


id: PR:Q10225
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ankyrin repeat and BTB/POZ domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00929","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D6.04c","secondary_identifiers":["UniProtKB:Q10225"],"synonyms":[{"name":"Spom972h-ABTB1","type":"exact"}],"termid":"PR:Q10225"}


id: PBO:0086895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family","termid":"PBO:0086895"}


id: PBO:0088563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2433 metallo phosphatase superfamily conserved fungal protein","termid":"PBO:0088563"}


id: PBO:0081540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF451 regulatory antisense RNA 1","termid":"PBO:0081540"}


id: PBO:0039032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 9","termid":"PBO:0039032"}


id: PBO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B","termid":"PBO:0051940"}


id: MONDO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized non-invasive adenocarcinoma of the lung measuring 3 cm or less. It is characterized by a pure lepidic growth pattern and the lack of stromal, vascular, or pleural invasion.","definition_xrefs":["NCIT:C136486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"lung carcinoma in situ","termid":"MONDO:0004660"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenocarcinoma in situ","secondary_identifiers":["NCIT:C8748","MEDGEN:1620128","DOID:0050870","ONCOTREE:LAIS","UMLS:C4521520"],"synonyms":[{"name":"adenosquamous cell carcinoma in situ of lung","type":"related"},{"name":"adenosquamous cell carcinoma in situ of the lung","type":"related"},{"name":"bronchioalveolar carcinoma","type":"related"},{"name":"bronchioloalveolar carcinoma","type":"narrow"},{"name":"in situ pulmonary adenocarcinoma","type":"related"},{"name":"lung adenocarcinoma In situ","type":"exact"},{"name":"lung adenosquamous cell carcinoma in situ","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of lung","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of the lung","type":"related"},{"name":"stage 0 adenosquamous cell lung carcinoma","type":"related"},{"name":"stage 0 adenosquamous lung cancer","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6 and v7","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v7","type":"related"}],"termid":"MONDO:0000503","xrefs":{"Monarch":{"xref_id":"0000503"}}}


id: GO:0030750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + putrescine = N-methylputrescine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:15037","EC:2.1.1.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"putrescine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01153","MetaCyc:PUTRESCINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:putrescine N-methyltransferase activity","type":"related"},{"name":"putrescine methyltransferase activity","type":"related"}],"termid":"GO:0030750"}


id: GO:0004254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acylaminoacyl-peptide + H2O = acylamino acid + peptide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acylaminoacyl-peptidase activity (obsolete GO:0004254)","synonyms":[{"name":"N-acylpeptide hydrolase activity","type":"related"},{"name":"N-formylmethionine (fMet) aminopeptidase activity","type":"related"},{"name":"acylamino-acid-releasing enzyme activity","type":"related"},{"name":"acylaminoacyl-peptidase activity","type":"exact"}],"termid":"GO:0004254"}


id: PBO:0088790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho2","termid":"PBO:0088790"}


id: MONDO:0100221
data:
  {"annotated_genes":["SJAG_01307","SJAG_02326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86214,86215],"is_not":false,"summary":null,"term":"MONDO:0100221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1763502","OMIM:619016","UMLS:C5436607","GARD:16402"],"synonyms":[{"name":"IFAP SYNDROME 2","type":"exact"},{"name":"IFAP2","type":"exact"},{"name":"ichthyosis , follicular, with atrichia and photophobia syndrome 2","type":"exact"},{"name":"ichthyosis follicularis, atrichia, and photophobia syndrome 2","type":"exact"}],"termid":"MONDO:0100221","terms_by_termid":{"MONDO:0100221":null},"xrefs":{"Monarch":{"xref_id":"0100221"}}}


id: PBO:0083999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol 3-phosphate/dihydroxyacetone phosphate sn-1 acyltransferase; dual substrate-specific acyltransferase of the glycerolipid biosynthesis pathway; prefers 16-carbon fatty acids; similar to Gpt2p; gene is constitutively transcribed","termid":"PBO:0083999"}


id: PBO:0052741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 33","termid":"PBO:0052741"}


id: MONDO:0016567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Locked-in syndrome (LIS) is a neurological condition characterized by the presence of sustained eye opening, quadriplegia or quadriparesis, anarthria, preserved cognitive functioning and a primary code of communication that uses vertical eye movements or blinking.","definition_xrefs":["Orphanet:2406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"locked-in syndrome","secondary_identifiers":["SCTID:38023001","ICD9:344.81","MESH:D011782","NORD:1376","DOID:12697","icd11.foundation:17562655","MedDRA:10024792","MESH:D000080422","UMLS:C0023944","MEDGEN:7378","GARD:6919"],"synonyms":[{"name":"Cerebromedullospinal disconnection","type":"exact"},{"name":"Locked In Syndrome","type":"exact"},{"name":"locked in syndrome","type":"exact"},{"name":"locked-in state","type":"exact"}],"termid":"MONDO:0016567","xrefs":{"Monarch":{"xref_id":"0016567"}}}


id: GO:1903220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["GOC:sart","GO_REF:0000059","PMID:12398416","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity (obsolete GO:1903220)","synonyms":[{"name":"activation of 'malic' enzyme","type":"related"},{"name":"activation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"narrow"},{"name":"activation of L-malate:NADP oxidoreductase activity","type":"narrow"},{"name":"activation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"activation of NADP-malic enzyme activity","type":"narrow"},{"name":"activation of NADP-specific malate dehydrogenase activity","type":"narrow"},{"name":"activation of NADP-specific malic enzyme","type":"related"},{"name":"activation of malate dehydrogenase (NADP, decarboxylating)","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating, NADP)","type":"narrow"},{"name":"positive regulation of 'malic' enzyme","type":"related"},{"name":"positive regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"positive regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"positive regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"positive regulation of NADP-malic enzyme activity","type":"exact"},{"name":"positive regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"positive regulation of NADP-specific malic enzyme","type":"related"},{"name":"positive regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"positive regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up regulation of 'malic' enzyme","type":"related"},{"name":"up regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up regulation of NADP-specific malic enzyme","type":"related"},{"name":"up regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up-regulation of 'malic' enzyme","type":"related"},{"name":"up-regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up-regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up-regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up-regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up-regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up-regulation of NADP-specific malic enzyme","type":"related"},{"name":"up-regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"upregulation of 'malic' enzyme","type":"related"},{"name":"upregulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"upregulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"upregulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"upregulation of NADP-malic enzyme activity","type":"exact"},{"name":"upregulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"upregulation of NADP-specific malic enzyme","type":"related"},{"name":"upregulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903220"}


id: MONDO:0012334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 29 (SPG29) is a complex form of hereditary spastic paraplegia characterized by a spastic paraplegia presenting in adolescence, associated with the additional manifestations of sensorial hearing impairment due to auditory neuropathy and persistent vomiting due to a hiatal or paraesophageal hernia.","definition_xrefs":["Orphanet:101009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"hereditary spastic paraplegia 29","secondary_identifiers":["MEDGEN:346682","MESH:C536863","OMIM:609727","SCTID:733029008","UMLS:C1857855","GARD:9729","DOID:0110780"],"synonyms":[{"name":"SPG29","type":"exact"},{"name":"autosomal dominant spastic paraplegia 29","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 29","type":"related"},{"name":"hereditary spastic paraplegia type 29","type":"exact"},{"name":"spastic paraplegia 29","type":"related"},{"name":"spastic paraplegia 29, autosomal dominant","type":"related"}],"termid":"MONDO:0012334","xrefs":{"Monarch":{"xref_id":"0012334"}}}


id: GO:0060498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands contributing to the formation of the primary lung bud.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in lung bud formation (obsolete GO:0060498)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in lung bud formation","type":"exact"}],"termid":"GO:0060498"}


id: MONDO:0013103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing epilepsy, idiopathic generalized, in which the cause of the disease is a mutation in the GABRD gene.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 10","secondary_identifiers":["UMLS:C2751603","OMIM:613060","DOID:0111292","MEDGEN:414062"],"synonyms":[{"name":"EIG10","type":"exact"},{"name":"GEFS+, type 5, susceptibility to","type":"related"},{"name":"GEFS+5, susceptibility to","type":"related"},{"name":"GEFSP5, susceptibility to","type":"related"},{"name":"epilepsy, idiopathic generalized, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 10","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 10","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 7","type":"related"},{"name":"generalised epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 5, susceptibility to","type":"related"},{"name":"susceptibility to idiopathic generalised epilepsy 10","type":"exact"},{"name":"susceptibility to idiopathic generalized epilepsy 10","type":"exact"}],"termid":"MONDO:0013103","xrefs":{"Monarch":{"xref_id":"0013103"}}}


id: PBO:0114390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin WD repeat-containing, dysferlin-like autophagy-related protein Mug65","termid":"PBO:0114390"}


id: PBO:0079111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 2 pseudogene 1","termid":"PBO:0079111"}


id: PBO:0055594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3030","termid":"PBO:0055594"}


id: GO:1905634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to chromatin.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:20889714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to chromatin","synonyms":[{"name":"regulation of protein localisation to chromatin","type":"exact"}],"termid":"GO:1905634"}


id: GO:0050151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-10-hydroxystearate = H2O + oleate.","definition_xrefs":["EC:4.2.1.53","RHEA:21852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"oleate hydratase activity","secondary_identifiers":["MetaCyc:OLEATE-HYDRATASE-RXN","KEGG_REACTION:R02813"],"synonyms":[{"name":"(R)-10-hydroxystearate 10-hydro-lyase (oleate-forming)","type":"related"},{"name":"(R)-10-hydroxystearate 10-hydro-lyase activity","type":"related"}],"termid":"GO:0050151"}


id: PBO:0052773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 65","termid":"PBO:0052773"}


id: PBO:0051417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-11","termid":"PBO:0051417"}


id: PBO:0090192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER ubiquitin family protein","termid":"PBO:0090192"}


id: MONDO:0013148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the HCN4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 8","secondary_identifiers":["GARD:15622","OMIM:613123","DOID:0110225","MEDGEN:413928","MESH:C567732","UMLS:C2751083"],"synonyms":[{"name":"BRGDA8","type":"exact"},{"name":"Brugada syndrome 8","type":"exact"},{"name":"Brugada syndrome caused by mutation in HCN4","type":"exact"},{"name":"Brugada syndrome type 8","type":"exact"},{"name":"HCN4 Brugada syndrome","type":"exact"}],"termid":"MONDO:0013148","xrefs":{"Monarch":{"xref_id":"0013148"}}}


id: FYECO:0000078
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119648,119660],"is_not":false,"summary":null,"term":"FYECO:0000078"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hydrogen peroxide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ H2O2","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"hydrogen peroxide added","type":"exact"}],"termid":"FYECO:0000078","terms_by_termid":{"FYECO:0000078":null,"FYPO_EXT:0000001":null}}


id: PBO:0053177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD1 antisense RNA 1","termid":"PBO:0053177"}


id: PBO:0065323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 46, pseudogene","termid":"PBO:0065323"}


id: GO:0018582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-hydroxy-2-naphthoate + O2 = (3E)-4-(2-carboxyphenyl)-2-oxobut-3-enoate.","definition_xrefs":["EC:1.13.11.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"1-hydroxy-2-naphthoate 1,2-dioxygenase activity","secondary_identifiers":["MetaCyc:1.13.11.38-RXN","UM-BBD_reactionID:r0486","RHEA:14749"],"synonyms":[{"name":"1-hydroxy-2-naphthoate dioxygenase activity","type":"exact"},{"name":"1-hydroxy-2-naphthoate-degrading enzyme activity","type":"narrow"},{"name":"1-hydroxy-2-naphthoate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"1-hydroxy-2-naphthoic acid dioxygenase activity","type":"related"}],"termid":"GO:0018582"}


id: GO:0010313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phytochrome.","definition_xrefs":["PMID:15486102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"phytochrome binding","termid":"GO:0010313"}


id: MONDO:0003735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of teratoma composed of incompletely differentiated components resembling fetal tissues. Even if the immature component is only a minor element of an otherwise differentiated teratoma, the tumor is still classified as immature. (Adapted from WHO)","definition_xrefs":["NCIT:C7014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system immature teratoma","secondary_identifiers":["ONCOTREE:BIMT","MEDGEN:272442","UMLS:C1332883","DOID:6019"],"synonyms":[{"name":"CNS immature teratoma","type":"exact"},{"name":"central nervous system immature teratoma","type":"exact"},{"name":"immature teratoma","type":"related"},{"name":"immature teratoma of CNS","type":"exact"},{"name":"immature teratoma of central nervous system","type":"exact"},{"name":"immature teratoma of the CNS","type":"exact"},{"name":"immature teratoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003735","xrefs":{"Monarch":{"xref_id":"0003735"}}}


id: MONDO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic vascular disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic vascular disease (obsolete MONDO:0016517)","secondary_identifiers":["Orphanet:233655"],"synonyms":[{"name":"rare genetic vascular disease","type":"exact"}],"termid":"MONDO:0016517","xrefs":{"Monarch":{"xref_id":"0016517"}}}


id: PBO:0046753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 6B","termid":"PBO:0046753"}


id: SO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron of a coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_intron_variant","synonyms":[{"name":"Jannovar:coding_transcript_intron_variant","type":"exact"},{"name":"coding sequence intron variant","type":"exact"}],"termid":"SO:0001969"}


id: PBO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 21","termid":"PBO:0052729"}


id: FYPO:0009018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a higher than normal proportion of cells in the population remains viable after entering stationary phase, when subjected to glucose starvation and when cadmium is present in the medium in a higher proportion than usual.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased viability in stationary phase","termid":"FYPO:0001309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"increased viability in stationary phase upon glucose starvation in the presence of cadmium","termid":"FYPO:0009018"}


id: PBO:0111915
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0111915"}


id: PBO:0050287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1 homeobox A","termid":"PBO:0050287"}


id: PBO:0031442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_vegetative_growth","termid":"PBO:0031442"}


id: MONDO:0019167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic IgA vasculitis that affects small vessels. It is characterized by skin purpura, arthritis, and abdominal and/or renal involvement.","definition_xrefs":["Orphanet:761"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"hypersensitivity vasculitis","termid":"MONDO:0006794"},{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"},{"relation_name":"is_a","term_name":"necrotizing vasculitis","termid":"MONDO:0800113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunoglobulin A vasculitis","secondary_identifiers":["icd11.foundation:1629105375","MEDGEN:48265","SCTID:191306005","ICD9:287.0","GARD:8204","MESH:D011695","DOID:11123","NCIT:C34963","UMLS:C0034152","SCTID:86074002"],"synonyms":[{"name":"HSP","type":"exact"},{"name":"Henoch Schonlein purpura","type":"related"},{"name":"Henoch-Schoenlein purpura","type":"exact"},{"name":"Henoch-Scholein purpura","type":"exact"},{"name":"Henoch-Schonlein purpura","type":"exact"},{"name":"IgA vasculitis","type":"exact"},{"name":"Schoenlein-Henoch purpura","type":"exact"},{"name":"allergic purpura","type":"exact"},{"name":"anaphylactoid purpura","type":"exact"},{"name":"autoimmune purpura","type":"exact"},{"name":"purpura rheumatica","type":"exact"},{"name":"purpura, Schonlein-Henoch","type":"related"},{"name":"purpura, autoimmune","type":"exact"},{"name":"rheumatoid purpura","type":"exact"},{"name":"vascular purpura","type":"related"}],"termid":"MONDO:0019167","xrefs":{"Monarch":{"xref_id":"0019167"}}}


id: PBO:0035912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_antisense_RNA_level_during_vegetative_growth","termid":"PBO:0035912"}


id: PBO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 47","termid":"PBO:0061387"}


id: GO:0005725
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the regions of heterochromatin that form a reproducible set of dense bands scattered along the euchromatic arms in polytene chromosomes.","definition_xrefs":["PMID:14579245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"intercalary heterochromatin","termid":"GO:0005725"}


id: PBO:0075947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 2 (pseudogene)","termid":"PBO:0075947"}


id: PBO:0090093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","termid":"PBO:0090093"}


id: MONDO:0017482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humeral agenesis/hypoplasia","termid":"MONDO:0017440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"humeral agenesis/hypoplasia, unilateral","secondary_identifiers":["Orphanet:295061"],"synonyms":[{"name":"humeral intercalary meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017482","xrefs":{"Monarch":{"xref_id":"0017482"}}}


id: PBO:0063656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 13","termid":"PBO:0063656"}


id: PBO:0038325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-immersed_in","termid":"PBO:0038325"}


id: PBO:0040109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with SH3 domain, ankyrin repeat and PH domain 1","termid":"PBO:0040109"}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: PBO:0069335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 595, pseudogene","termid":"PBO:0069335"}


id: GO:0045603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"positively_regulates","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell differentiation","synonyms":[{"name":"activation of endothelial cell differentiation","type":"narrow"},{"name":"stimulation of endothelial cell differentiation","type":"narrow"},{"name":"up regulation of endothelial cell differentiation","type":"exact"},{"name":"up-regulation of endothelial cell differentiation","type":"exact"},{"name":"upregulation of endothelial cell differentiation","type":"exact"}],"termid":"GO:0045603"}


id: PBO:0073230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO specific peptidase 3","termid":"PBO:0073230"}


id: GO:0062228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of adult somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of somatic muscle development","termid":"GO:0062225"},{"relation_name":"is_a","term_name":"regulation of adult somatic muscle development","termid":"GO:0062226"},{"relation_name":"negatively_regulates","term_name":"adult somatic muscle development","termid":"GO:0007527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adult somatic muscle development","termid":"GO:0062228"}


id: GO:0018745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the ether in chloro-, bromo- or hydroxyepoxypropane to produce a chloro- or bromopropane diol or glycerol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete epoxide hydrolase A activity (obsolete GO:0018745)","termid":"GO:0018745"}


id: PBO:0040768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 3 pseudogene 3","termid":"PBO:0040768"}


id: MONDO:1012789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the ATP1B2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, ATP1B2-related, dog","secondary_identifiers":["OMIA:002110-9615"],"synonyms":[{"name":"ataxia, cerebellar, ATP1B2-related, dog","type":"exact"},{"name":"spongy degeneration with cerebellar ataxia 2","type":"related"}],"termid":"MONDO:1012789","xrefs":{"Monarch":{"xref_id":"1012789"}}}


id: GO:0071631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a mating pheromone, a peptide hormone that induces a behavioral or physiological response(s) from a responding organism or cell, that positively regulates a conjugation process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["GOC:mah","GOC:jh","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"is_a","term_name":"mating pheromone secretion","termid":"GO:0071834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"mating pheromone secretion involved in positive regulation of conjugation with cellular fusion","secondary_identifiers":["GO:0071833"],"synonyms":[{"name":"mating-type pheromone secretion involved in conjugation with cellular fusion","type":"exact"},{"name":"peptide pheromone export involved in positive regulation of conjugation with cellular fusion","type":"related"}],"termid":"GO:0071631"}


id: PBO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 21","termid":"PBO:0071723"}


id: GO:0019353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX from other compounds, including glutamate.","definition_xrefs":["PMID:32976912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protoporphyrinogen IX biosynthetic process","termid":"GO:0006782"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"protoporphyrinogen IX biosynthetic process from glutamate","synonyms":[{"name":"protoporphyrinogen IX anabolism from glutamate","type":"exact"},{"name":"protoporphyrinogen IX formation from glutamate","type":"exact"},{"name":"protoporphyrinogen IX synthesis from glutamate","type":"exact"}],"termid":"GO:0019353"}


id: FYPO:0006605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"},{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","termid":"FYPO:0006437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000257","FYPO:0001312","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0006605"}


id: MONDO:0032485
data:
  {"annotated_genes":["SJAG_01778"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86881],"is_not":false,"summary":null,"term":"MONDO:0032485"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01778":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder 61","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618009","UMLS:C5231400","GARD:18514","MEDGEN:1684867"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER 61","type":"related"},{"name":"MRD61","type":"related"},{"name":"Mental Retardation, Autosomal Dominant 61","type":"related"}],"termid":"MONDO:0032485","terms_by_termid":{"MONDO:0032485":null},"xrefs":{"Monarch":{"xref_id":"0032485"}}}


id: PBO:0013450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein (predicted)","termid":"PBO:0013450"}


id: GO:0045488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectin, a group of galacturonic acid-containing, water-soluble colloidal carbohydrates of high molecular weight and of net negative charge.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"pectin metabolic process","synonyms":[{"name":"pectin metabolism","type":"exact"}],"termid":"GO:0045488"}


id: FYPO:0004704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in increased numbers","termid":"FYPO:0004538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002399","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"interphase microtubules present in increased numbers","synonyms":[{"name":"cytoplasmic microtubules present in greater numbers","type":"exact"},{"name":"cytoplasmic microtubules present in increased numbers during mitotic interphase","type":"exact"},{"name":"increased level of interphase MTs","type":"exact"},{"name":"interphase cytoplasmic microtubules present in increased numbers","type":"exact"},{"name":"interphase microtubules present in increased numbers during mitotic cell cycle","type":"related"},{"name":"interphase microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004704"}


id: MONDO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete estrogen-receptor positive breast cancer (obsolete MONDO:0000613)","termid":"MONDO:0000613","xrefs":{"Monarch":{"xref_id":"0000613"}}}


id: PBO:0052347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 3A","termid":"PBO:0052347"}


id: MONDO:0034733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare otorhinolaryngological malformation characterized by a hypoplastic or absent cochlear nerve, resulting in variable hearing loss or total deafness, depending on the quantity of nerve fibers present. The condition can be unilateral or bilateral, occur as an isolated malformation or in the context of a complex syndrome, and may be associated with a hypoplastic internal auditory or cochlear nerve canal. [Orphanet:502318]","definition_xrefs":["Orphanet:502318"],"gene_count":0,"genotype_count":0,"name":"obsolete cochlear nerve deficiency (obsolete MONDO:0034733)","secondary_identifiers":["ICD10CM:H93.3"],"termid":"MONDO:0034733","xrefs":{"Monarch":{"xref_id":"0034733"}}}


id: PBO:0052793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33B","termid":"PBO:0052793"}


id: PBO:0039749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O like","termid":"PBO:0039749"}


id: PBO:0055643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3082","termid":"PBO:0055643"}


id: PBO:0072456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 20","termid":"PBO:0072456"}


id: PBO:0079946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 1","termid":"PBO:0079946"}


id: GO:0042201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-cyclopropylmelamine, a triazine compound commonly used as an insect growth regulator insecticide.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"s-triazine compound metabolic process","termid":"GO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-cyclopropylmelamine metabolic process","synonyms":[{"name":"N-cyclopropylmelamine metabolism","type":"exact"},{"name":"cyromazine metabolic process","type":"exact"},{"name":"cyromazine metabolism","type":"exact"}],"termid":"GO:0042201"}


id: MONDO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct sarcoma","secondary_identifiers":["NCIT:C5029","DOID:4064"],"synonyms":[{"name":"bile duct sarcoma","type":"exact"},{"name":"sarcoma of bile duct","type":"exact"},{"name":"sarcoma of the bile duct","type":"exact"}],"termid":"MONDO:0002862","xrefs":{"Monarch":{"xref_id":"0002862"}}}


id: MOD:00848
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with a particular compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reagent derivatized residue","termid":"MOD:00848"}


id: PBO:0031321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_papulacandin_B","termid":"PBO:0031321"}


id: PATO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000849 absolute auditory ability (obsolete PATO:0000849)","termid":"PATO:0000849"}


id: PBO:0066633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein like 2","termid":"PBO:0066633"}


id: SOFP:orf_classification
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"gene call confidence flag","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf_classification","termid":"SOFP:orf_classification"}


id: MONDO:0015437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 21 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including growth retardation, developmental delay, intellectual disability, epilepsy, microcephaly, short stature, dysmorphic features, hypogammaglobulinemia, thrombocytopenia and unspecific skeletal anomalies (hemivertebrae, clinodactyly, syndactyly). In rare cases, it has been described in phenotypically normal individuals.","definition_xrefs":["Orphanet:1445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 21","secondary_identifiers":["MEDGEN:419409","NORD:947","SCTID:31325007","UMLS:C2931422","MESH:C537109","GARD:6083"],"synonyms":[{"name":"Chromosome 21 Ring","type":"exact"},{"name":"R21","type":"related"},{"name":"Ring 21","type":"related"},{"name":"Ring chromosome 21 syndrome","type":"related"},{"name":"Ring chromosome type 21","type":"exact"},{"name":"chromosome 21 en anneau","type":"exact"},{"name":"chromosome 21 ring","type":"related"}],"termid":"MONDO:0015437","xrefs":{"Monarch":{"xref_id":"0015437"}}}


id: GO:0015812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"gamma-aminobutyric acid transport","synonyms":[{"name":"4-aminobutanoate transport","type":"exact"},{"name":"4-aminobutyrate transport","type":"exact"},{"name":"GABA transport","type":"exact"}],"termid":"GO:0015812"}


id: GO:0060671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a trophoblast cell acquires specialized features of an epithelial cell of the placental labyrinthine layer.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in embryonic placenta development","termid":"GO:0060671"}


id: FYPO:0000147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of establishment or maintenance of cell polarity","termid":"FYPO:0000191"},{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"},{"relation_name":"is_a","term_name":"abnormal cell polarity","termid":"FYPO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0005568"],"is_obsolete":false,"name":"abnormal NETO","synonyms":[{"name":"abnormal NETO during vegetative growth","type":"exact"},{"name":"abnormal cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal new end take-off","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0000147"}


id: MONDO:1012947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited bone disorder that occurs in chickens and is characterized by abnormal limb development.","definition_xrefs":["PMID:10912683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ametapodia, chicken","termid":"MONDO:1012947","xrefs":{"Monarch":{"xref_id":"1012947"}}}


id: PBO:0038993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 2","termid":"PBO:0038993"}


id: MONDO:0030020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 44","secondary_identifiers":["OMIM:618855","MEDGEN:1718899","DOID:0070424","UMLS:C5394293"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 44","type":"exact"},{"name":"COXPD44","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 44","type":"exact"}],"termid":"MONDO:0030020","xrefs":{"Monarch":{"xref_id":"0030020"}}}


id: PBO:0065478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD14 divergent transcript","termid":"PBO:0065478"}


id: GO:2000572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-4-dependent isotype switching to IgE isotypes.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching to IgE isotypes","termid":"GO:0048295"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-dependent isotype switching to IgE isotypes","termid":"GO:2000571"},{"relation_name":"positively_regulates","term_name":"interleukin-4-dependent isotype switching to IgE isotypes","termid":"GO:0035708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0010467","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4-dependent isotype switching to IgE isotypes","synonyms":[{"name":"positive regulation of IL-4-dependent isotype switching to IgE isotypes","type":"exact"}],"termid":"GO:2000572"}


id: SO:0000332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_conserved_region","synonyms":[{"name":"coding conserved region","type":"exact"}],"termid":"SO:0000332"}


id: GO:0003040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from an aortic body is relayed to the vasomotor center, causing it to signal an increase arterial pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitation of vasomotor center by chemoreceptor signaling","termid":"GO:0002008"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by aortic body chemoreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003040"}


id: PBO:0044346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 30","termid":"PBO:0044346"}


id: PBO:0084254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol monophosphatase; involved in biosynthesis of inositol and in phosphoinositide second messenger signaling; INM1 expression increases in the presence of inositol and decreases upon exposure to antibipolar drugs lithium and valproate","termid":"PBO:0084254"}


id: PBO:0067199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 263, pseudogene","termid":"PBO:0067199"}


id: MONDO:0015097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital aortic valve stenosis","termid":"MONDO:0017735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortic valve dysplasia","secondary_identifiers":["GARD:19776","ICD9:746.89","SCTID:253604004","Orphanet:101043","MEDGEN:576679","UMLS:C0344993"],"termid":"MONDO:0015097","xrefs":{"Monarch":{"xref_id":"0015097"}}}


id: PBO:0091671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2, long isoform","termid":"PBO:0091671"}


id: GO:0006577
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111846,103941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[103942,111847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any betaine, the N-trimethyl derivative of an amino acid.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amino-acid betaine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"betaine metabolic process","type":"exact"},{"name":"betaine metabolism","type":"exact"}],"termid":"GO:0006577","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: GO:0031898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing the chromoplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid envelope","termid":"GO:0009526"},{"relation_name":"part_of","term_name":"chromoplast","termid":"GO:0009509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast envelope","termid":"GO:0031898"}


id: PBO:0091076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III synthase Ups","termid":"PBO:0091076"}


id: PBO:0055201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2626","termid":"PBO:0055201"}


id: PBO:0068126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 433","termid":"PBO:0068126"}


id: PBO:0054375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1770","termid":"PBO:0054375"}


id: PBO:0015703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane transmembrane transport regulator (predicted)","termid":"PBO:0015703"}


id: GO:1905532
data:
  {"annotated_genes":["SJAG_05346","SJAG_00991","SJAG_03591","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[93676,92082,99205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-leucine import across plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:10467003","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-leucine import across plasma membrane","termid":"GO:1903801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of L-leucine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903128"],"synonyms":[{"name":"regulation of L-leucine import into cell","type":"exact"}],"termid":"GO:1905532","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: GO:0018548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pentaerythritol trinitrate + NADPH = NADP+ + nitrate + pentaerythritol dinitrate.","definition_xrefs":["PMID:29168057","PMID:31119061"],"gene_count":0,"genotype_count":0,"name":"obsolete pentaerythritol trinitrate reductase activity (obsolete GO:0018548)","termid":"GO:0018548"}


id: GO:0072733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a staurosporine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to staurosporine","termid":"GO:0072733"}


id: SO:0000189
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A retrotransposon without long terminal repeat sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrotransposon","termid":"SO:0000180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_LTR_retrotransposon","synonyms":[{"name":"non LTR retrotransposon","type":"exact"}],"termid":"SO:0000189"}


id: PBO:0082090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' to 3' exonuclease, 5' flap endonuclease; required for Okazaki fragment processing and maturation, for long-patch base-excision repair and large loop repair (LLR), ribonucleotide excision repair; member of the S. pombe RAD2/FEN1 family; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082090"}


id: GO:0003172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the sinoatrial valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial valve development","synonyms":[{"name":"SA valve development","type":"exact"}],"termid":"GO:0003172"}


id: GO:2000913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of galactoglucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of galactoglucomannan catabolic process","termid":"GO:2000912"},{"relation_name":"negatively_regulates","term_name":"galactoglucomannan catabolic process","termid":"GO:2000885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"negative regulation of galactoglucomannan catabolic process","synonyms":[{"name":"negative regulation of galactoglucomannan catabolism","type":"exact"}],"termid":"GO:2000913"}


id: MONDO:0014534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microlissencephaly in which the cause of the disease is a mutation in the KATNB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 6 with microcephaly","secondary_identifiers":["MEDGEN:863962","OMIM:616212","DOID:0112236","UMLS:C4015525"],"synonyms":[{"name":"KATNB1 Microlissencephaly","type":"exact"},{"name":"KATNB1 microlissencephaly","type":"exact"},{"name":"LIS6","type":"related"},{"name":"Microlissencephaly caused by mutation in KATNB1","type":"exact"},{"name":"lissencephaly 6 with microcephaly","type":"exact"},{"name":"lissencephaly 6, with microcephaly","type":"exact"},{"name":"microlissencephaly caused by mutation in KATNB1","type":"exact"}],"termid":"MONDO:0014534","xrefs":{"Monarch":{"xref_id":"0014534"}}}


id: GO:1903019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glycoprotein metabolic process.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:23544079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"regulation of glycoprotein metabolic process","termid":"GO:1903018"},{"relation_name":"negatively_regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycoprotein metabolic process","synonyms":[{"name":"down regulation of glycoprotein metabolic process","type":"exact"},{"name":"down regulation of glycoprotein metabolism","type":"exact"},{"name":"down-regulation of glycoprotein metabolic process","type":"exact"},{"name":"down-regulation of glycoprotein metabolism","type":"exact"},{"name":"downregulation of glycoprotein metabolic process","type":"exact"},{"name":"downregulation of glycoprotein metabolism","type":"exact"},{"name":"inhibition of glycoprotein metabolic process","type":"narrow"},{"name":"inhibition of glycoprotein metabolism","type":"narrow"},{"name":"negative regulation of glycoprotein metabolism","type":"exact"}],"termid":"GO:1903019"}


id: MONDO:0859306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with variable intellectual disability and dysmorphic facies","secondary_identifiers":["MEDGEN:1824015","OMIM:620098","UMLS:C5774242"],"termid":"MONDO:0859306","xrefs":{"Monarch":{"xref_id":"0859306"}}}


id: MONDO:0859297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and skeletal and brain abnormalities","secondary_identifiers":["UMLS:C5774231","Orphanet:662189","OMIM:620073","MEDGEN:1824004"],"termid":"MONDO:0859297","xrefs":{"Monarch":{"xref_id":"0859297"}}}


id: PBO:0068251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N3","termid":"PBO:0068251"}


id: PBO:0088368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein","termid":"PBO:0088368"}


id: PBO:0061018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1","termid":"PBO:0061018"}


id: GO:1903606
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94776,107792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903607"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytochrome c.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:dph","PMID:19721088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome metabolic process","termid":"GO:1903604"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytochrome c metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytochrome c metabolism","type":"exact"}],"termid":"GO:1903606","terms_by_termid":{"GO:1903607":null}}


id: PBO:0058075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4293","termid":"PBO:0058075"}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: MONDO:0100434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pathological condition resulting from chronic exposure to hypoxia at high altitude. The syndrome is characterized by an excessive number of red blood cells associated with a high blood hemoglobin concentration ([Hb]), hypoxemia, and, in some cases, pulmonary hypertension. Clinical signs include headache, fatigue, sleep disturbances, dyspnea, digestive complaints, and high risk of thrombotic events.","definition_xrefs":["EFO:0010143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altitude sickness","termid":"MONDO:0006625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic mountain sickness","secondary_identifiers":["SCTID:241975000"],"synonyms":[{"name":"Monge's disease","type":"exact"}],"termid":"MONDO:0100434","xrefs":{"Monarch":{"xref_id":"0100434"}}}


id: PR:Q9HDZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDZ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C589.09, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.09","synonyms":[{"name":"Spom972h-csr101","type":"exact"}],"termid":"PR:Q9HDZ5"}


id: PBO:0083593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR069C has a paralog, YHR214C-D, that arose from a segmental duplication","termid":"PBO:0083593"}


id: PBO:0072862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP","termid":"PBO:0072862"}


id: PBO:0054416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1812","termid":"PBO:0054416"}


id: GO:0031344
data:
  {"annotated_genes":["SJAG_04509","SJAG_01794","SJAG_02379","SJAG_00514","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88236,111673,93822,91187,90208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell projection organisation","type":"exact"},{"name":"regulation of cell projection organization and biogenesis","type":"related"}],"termid":"GO:0031344","terms_by_termid":{"GO:1902917":null}}


id: PBO:0047409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 47","termid":"PBO:0047409"}


id: PR:Q9UT57
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NUBP2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23264:SF9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor SPAC806.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC806.02c","secondary_identifiers":["UniProtKB:Q9UT57"],"synonyms":[{"name":"Spom972h-NUBP2","type":"exact"}],"termid":"PR:Q9UT57"}


id: MONDO:0859158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia, intention tremor, and hypotonia syndrome, childhood-onset","secondary_identifiers":["MEDGEN:1787902","OMIM:619352","UMLS:C5543478"],"termid":"MONDO:0859158","xrefs":{"Monarch":{"xref_id":"0859158"}}}


id: GO:0043036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["GOC:jl","PMID:11217978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"starch grain","synonyms":[{"name":"starch granule","type":"exact"}],"termid":"GO:0043036"}


id: MONDO:0011577
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85622,85623],"is_not":false,"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myositis","termid":"MONDO:0007827"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, proximal, and ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:381340","DOID:0080719","MESH:C565311","OMIM:605637","UMLS:C1854106"],"synonyms":[{"name":"MYOPATHY, proximal, and ophthalmoplegia","type":"related"},{"name":"MYPOP","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant, formerly","type":"related"},{"name":"myopathy with congenital joint contractures, ophthalmoplegia, and rimmed vacuoles","type":"related"},{"name":"myopathy, proximal, and ophthalmoplegia","type":"exact"},{"name":"proximal myopathy and ophthalmoplegia","type":"exact"}],"termid":"MONDO:0011577","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0011577"}}}


id: SO:0001698
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"\\\"A primer containing an SNV at the 3' end for accurate genotyping.","direct_ancestors":[{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASPE_primer","synonyms":[{"name":"ASPE primer","type":"exact"},{"name":"allele specific primer extension primer","type":"exact"}],"termid":"SO:0001698"}


id: GO:0016703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and one oxygen atom is incorporated into a donor.","definition_xrefs":["GOC:mah","EC:1.13.12.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","termid":"GO:0016701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}


id: MONDO:0016217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mal de debarquement (MdD) is a rare otorhinolaryngological disease characterized by a persistent sensation of motion such as rocking, swaying, tumbling and/or bobbing following a period of exposure to passive movement, usually an ocean cruise or other types of water, train, automobile or air travel and less commonly other movements (like sleeping on a waterbed). Onset may be spontaneous in some patients. Manifestations begin shortly after the stimulus, persist for 6 months to years and may be associated with anxiety, fatigue and impaired cognition. Symptoms are often accentuated when in an enclosed space or when attempting to be motionless (sitting, lying down or standing in a stationary position) and are relieved when in passive motion such as in a moving car, airplane or train.","definition_xrefs":["Orphanet:210272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal de Debarquement","secondary_identifiers":["SCTID:446079007","MEDGEN:345629","MedDRA:10064924","NORD:1394","GARD:6959","UMLS:C1608983","MESH:C537840","icd11.foundation:459420954"],"synonyms":[{"name":"MDD","type":"exact"},{"name":"Mal de debarquement syndrome","type":"related"},{"name":"Mal de débarquement","type":"related"},{"name":"MdDS","type":"exact"},{"name":"disembarkment syndrome","type":"exact"},{"name":"sickness of disembarkment","type":"exact"}],"termid":"MONDO:0016217","xrefs":{"Monarch":{"xref_id":"0016217"}}}


id: PBO:0116252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane leptomycin transmembrane transporter Pmd1","termid":"PBO:0116252"}


id: PBO:0081837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 772","termid":"PBO:0081837"}


id: PBO:0065100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR1B antisense RNA 1","termid":"PBO:0065100"}


id: MONDO:0002331
data:
  {"annotated_genes":["SJAG_04148","SJAG_00471","SJAG_00093","SJAG_04017","SJAG_03361","SJAG_00933","SJAG_00864","SJAG_04000","SJAG_04013","SJAG_03986","SJAG_01374","SJAG_04621","SJAG_01185","SJAG_03182"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[86179,86180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[86740,86741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[86264,86265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"Pathological processes of the KIDNEY without inflammatory or neoplastic components. Nephrosis may be a primary disorder or secondary complication of other diseases. It is characterized by the NEPHROTIC SYNDROME indicating the presence of PROTEINURIA and HYPOALBUMINEMIA with accompanying EDEMA.","definition_xrefs":["MESH:D009401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00471":null,"SJAG_00864":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_03986":null,"SJAG_04000":null,"SJAG_04013":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2527","MEDGEN:10223","UMLS:C0027720"],"synonyms":[{"name":"Nephroses","type":"exact"}],"termid":"MONDO:0002331","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0026726":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0002331"}}}


id: MONDO:0020496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of porencephaly that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"porencephaly","termid":"MONDO:0017410"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial porencephaly","secondary_identifiers":["Orphanet:99810","GARD:2258","MEDGEN:401353","UMLS:C1867983","OMIMPS:175780","DOID:0112313","icd11.foundation:1833583032"],"synonyms":[{"name":"familial porencephalic white matter disease","type":"related"},{"name":"hereditary porencephaly","type":"exact"}],"termid":"MONDO:0020496","xrefs":{"Monarch":{"xref_id":"0020496"}}}


id: PBO:0052506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 20","termid":"PBO:0052506"}


id: GO:0050370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tyrosine + O2 + NADPH + H+ = N-hydroxytyrosine + NADP+ + H2O.","definition_xrefs":["MetaCyc:TYROSINE-N-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tyrosine N-monooxygenase activity","secondary_identifiers":["RHEA:22464"],"synonyms":[{"name":"CYP79A1 activity","type":"narrow"},{"name":"L-tyrosine,NADPH:oxygen oxidoreductase (N-hydroxylating)","type":"exact"},{"name":"tyrosine N-hydroxylase activity","type":"exact"}],"termid":"GO:0050370"}


id: PBO:0055129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2548","termid":"PBO:0055129"}


id: PBO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 2","termid":"PBO:0044049"}


id: GO:0016899
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003885"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0016899","terms_by_termid":{"GO:0003885":null}}


id: GO:0039519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus effect a change in the frequency, rate or extent of autophagy in the host.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host autophagy (obsolete GO:0039519)","synonyms":[{"name":"regulation by virus of host autophagy","type":"exact"}],"termid":"GO:0039519"}


id: PBO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 217 member B","termid":"PBO:0047202"}


id: MONDO:0008111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculodentodigital dysplasia (ODDD) is characterized by craniofacial, neurologic, limb and ocular abnormalities.","definition_xrefs":["Orphanet:2710"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"oculodentodigital dysplasia","secondary_identifiers":["MEDGEN:167236","SCTID:38215007","NORD:1519","UMLS:C0812437","OMIM:164200","DOID:0060291","MedDRA:10063691","MESH:C563160","GARD:7239","ICD9:759.89"],"synonyms":[{"name":"Meyer-Schwickerath syndrome","type":"exact"},{"name":"ODDD","type":"related"},{"name":"ODDD syndrome","type":"exact"},{"name":"Oculo-Dento-Digital Dysplasia","type":"exact"},{"name":"oculo-dento-digital dysplasia","type":"exact"},{"name":"oculo-dento-digital syndrome","type":"related"},{"name":"oculodentodigital dysplasia","type":"exact"},{"name":"oculodentodigital syndrome","type":"related"},{"name":"oculodentoosseous dysplasia","type":"exact"},{"name":"odd syndrome","type":"exact"}],"termid":"MONDO:0008111","xrefs":{"Monarch":{"xref_id":"0008111"}}}


id: PBO:0077355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 95","termid":"PBO:0077355"}


id: PR:000049784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-) that has been phosphorylated on two consecutive residues equivalent to Ser-35 and Ser-36 in the sequence represented by UniProtKB:Q9UUG5-1. Example: UniProtKB:Q9UUG5-1, Ser-35/Ser-36, MOD:00046.","definition_xrefs":["PMID:19570908","PMID:19029336","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin regulatory light chain 1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UUG5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rlc1/Phos(S35,S36)","pombase_gene_id":"SPAC926.03","synonyms":[{"name":"PomBase_original_PRO_term_name: myosin regulatory light chain 1 phosphorylated 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rlc1p phosphorylated 1","type":"broad"},{"name":"myosin II regulatory light chain Rlc1p Ser-35/Ser-36 phosphorylated","type":"related"},{"name":"rlc1/Phos(S35,S36)","type":"exact"}],"termid":"PR:000049784"}


id: PBO:0080338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 102 pseudogene","termid":"PBO:0080338"}


id: MONDO:0006937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the dental pulp.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental pulp disorder","termid":"MONDO:0003394"},{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulpitis","secondary_identifiers":["icd11.foundation:576344431","MESH:D011671","EFO:1001139","ICD9:522.0","DOID:11121","UMLS:C0034103","ICD10CM:K04.0","MEDGEN:19580","SCTID:32620007","MedDRA:10037463"],"synonyms":[{"name":"dental pulp inflammation","type":"exact"},{"name":"inflammation of dental pulp","type":"exact"}],"termid":"MONDO:0006937","xrefs":{"Monarch":{"xref_id":"0006937"}}}


id: MONDO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant epithelioid hemangioendothelioma (obsolete MONDO:0000899)","termid":"MONDO:0000899","xrefs":{"Monarch":{"xref_id":"0000899"}}}


id: PR:O13711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.04 gene.","definition_xrefs":["UniProtKB:O13711","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.04","synonyms":[{"name":"Spom972h-SPAC14C4.04","type":"exact"}],"termid":"PR:O13711"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["RHEA:17013","EC:5.4.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN","KEGG_REACTION:R00661"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: GO:0120281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that surrounds an autolysosome, a single-membrane-bounded vesicle in which endogenous cellular material is degraded.","definition_xrefs":["PMID:24657946","PMID:26382870","PMID:32047650","GOC:krc","PMID:17182262","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"part_of","term_name":"autolysosome","termid":"GO:0044754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"autolysosome membrane","termid":"GO:0120281"}


id: PATO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer being thin and lacking outgrowths.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pin-like","termid":"PATO:0002458"}


id: GO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac muscle tissue.","definition_xrefs":["GOC:mtg_heart","PMID:19056682","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac muscle tissue morphogenesis (obsolete GO:0061350)","termid":"GO:0061350"}


id: GO:0002657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction dependent upon immune response","termid":"GO:0002654"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"},{"relation_name":"positively_regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction to nonself antigen","synonyms":[{"name":"activation of tolerance induction to nonself antigen","type":"narrow"},{"name":"stimulation of tolerance induction to nonself antigen","type":"narrow"},{"name":"up regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"up-regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"upregulation of tolerance induction to nonself antigen","type":"exact"}],"termid":"GO:0002657"}


id: FYPO:0004854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actomyosin contractile ring","termid":"FYPO:0002560"},{"relation_name":"is_a","term_name":"increased protein localization to cell division site","termid":"FYPO:0004655"},{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to actomyosin contractile ring","synonyms":[{"name":"increased protein localisation to actomyosin contractile ring","type":"exact"},{"name":"increased protein localization to actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"increased protein localization to actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"increased protein localization to actomyosin contractile ring involved in mitotic cytokinesis","type":"exact"},{"name":"increased protein localization to cytokinetic contractile ring","type":"exact"},{"name":"increased protein localization to mitotic contractile ring","type":"exact"},{"name":"increased protein recruitment to actomyosin contractile ring","type":"related"}],"termid":"FYPO:0004854"}


id: GO:0048509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meristem development, the biological process whose specific outcome is the progression of the meristem over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem development","termid":"GO:0048509"}


id: FYPO:0003138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the ascospore wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"},{"relation_name":"output_of","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0002946","FYPO:0000002","FYPO:0005447","FYPO:0000121","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascospore wall morphology","synonyms":[{"name":"abnormal spore wall morphology","type":"exact"},{"name":"abnormal spore wall organization","type":"related"}],"termid":"FYPO:0003138"}


id: GO:1904493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tetrahydrofolyl-poly(glutamate) polymer.","definition_xrefs":["GOC:hal","GO_REF:0000067","GOC:BHF","GOC:TermGenie","PMID:24863754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"tetrahydrofolyl-poly(glutamate) polymer binding","termid":"GO:1904493"}


id: PBO:0075672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 3","termid":"PBO:0075672"}


id: FYPO:0009062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to X-rays.","direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to ionizing radiation during vegetative growth","termid":"FYPO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to X-rays during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to X rays","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to X-rays","type":"exact"},{"name":"resistant to X rays during vegetative growth","type":"exact"},{"name":"resistant to X-rays during vegetative growth","type":"exact"}],"termid":"FYPO:0009062"}


id: MONDO:0010490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by neurologic abnormalities (global developmental delay in language, social skills and fine and gross motor development, intellectual disability, hypotonia, microcephaly, seizures/epilepsy), facial dysmorphism (deep set eyes, large ears, hypoplastic vermillion of upper lip, large mouth with widely spaced teeth), feeding problems often due to chewing difficulties and aversion to food with certain textures, failure to thrive, gastrointestinal abnormalities (reflux or vomiting) and strabismus. The disease is caused by mutations in the gene SSR4(Xq28).","definition_xrefs":["Orphanet:370927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"SSR4-congenital disorder of glycosylation","secondary_identifiers":["GARD:12405","MEDGEN:860832","SCTID:733115009","OMIM:300934","UMLS:C4012395","DOID:0080574"],"synonyms":[{"name":"CDG 1Y","type":"related"},{"name":"CDG Iy","type":"related"},{"name":"CDG syndrome type Iy","type":"exact"},{"name":"CDG-Iy","type":"exact"},{"name":"CDG1Y","type":"exact"},{"name":"CDGIy","type":"related"},{"name":"SSR4-CDG","type":"exact"},{"name":"SSR4-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Iy","type":"exact"},{"name":"congenital disorder of glycosylation type 1y","type":"exact"},{"name":"congenital disorder of glycosylation type Iy","type":"exact"},{"name":"congenital disorder of glycosylation, type Iy","type":"related"},{"name":"congenital disorder of glycosylation, type Iy, X-linked recessive","type":"exact"}],"termid":"MONDO:0010490","xrefs":{"Monarch":{"xref_id":"0010490"}}}


id: PBO:0031531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_oxidoreductase_activity","termid":"PBO:0031531"}


id: GO:0050558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-maltose = beta-maltose.","definition_xrefs":["EC:5.1.3.21","RHEA:21228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"maltose epimerase activity","secondary_identifiers":["MetaCyc:5.1.3.21-RXN","KEGG_REACTION:R07319"],"synonyms":[{"name":"maltose 1-epimerase activity","type":"related"}],"termid":"GO:0050558"}


id: PBO:0003557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase Prs5 (predicted)","termid":"PBO:0003557"}


id: PBO:0000229
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein","termid":"PBO:0000229"}


id: PBO:0068789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 26, pseudogene","termid":"PBO:0068789"}


id: MONDO:0012866
data:
  {"annotated_genes":["SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87393],"is_not":false,"summary":null,"term":"MONDO:0012866"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 35 is a rare form of hereditary spastic paraplegia characterized by childhood (exceptionally adolescent) onset of a complex phenotype presenting with lower limb (followed by upper limb) spasticity with hyperreflexia and extensor plantar responses, with additional manifestations including progressive dysarthria, dystonia, mild cognitive decline, extrapyramidal features, optic atrophy and seizures. White matter abnormalities and brain iron accumulation have also been observed on brain magnetic resonance imaging.","definition_xrefs":["Orphanet:171629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 35","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567311","GARD:10538","DOID:0110786","NANDO:1200541","SCTID:764688002","MEDGEN:501249","UMLS:C3496228","OMIM:612319"],"synonyms":[{"name":"FA2H hereditary spastic paraplegia","type":"exact"},{"name":"SPG35","type":"exact"},{"name":"autosomal recessive spastic paraplegia 35","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 35","type":"exact"},{"name":"hereditary spastic paraplegia 35","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in FA2H","type":"exact"},{"name":"hereditary spastic paraplegia type 35","type":"exact"},{"name":"leukodystrophy, dysmyelinating and spastic paraparesis with or without dystonia","type":"exact"},{"name":"leukodystrophy, dysmyelinating, and spastic paraparesis with or without dystonia","type":"related"},{"name":"spastic paraplegia 35, autosomal recessive","type":"related"}],"termid":"MONDO:0012866","terms_by_termid":{"MONDO:0012866":null},"xrefs":{"Monarch":{"xref_id":"0012866"}}}


id: GO:0060987
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex that contains a tube of lipid surrounded by a protein coat.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex","termid":"GO:0032994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"lipid tube","termid":"GO:0060987"}


id: PR:O74426
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase 32A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04727","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk33 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.10","secondary_identifiers":["UniProtKB:O74426"],"synonyms":[{"name":"Spom972h-STK32A","type":"exact"}],"termid":"PR:O74426"}


id: PATO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's cartilage quantities.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Cartilaginous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilaginous","termid":"PATO:0001449"}


id: GO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a trigeminal ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion maturation","termid":"GO:0061558"},{"relation_name":"part_of","term_name":"trigeminal nerve maturation","termid":"GO:0021635"},{"relation_name":"part_of","term_name":"trigeminal ganglion development","termid":"GO:0061551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion maturation","synonyms":[{"name":"trigeminal ganglia maturation","type":"related"}],"termid":"GO:0061557"}


id: PBO:0054522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1922","termid":"PBO:0054522"}


id: GO:0016885
data:
  {"annotated_genes":["SJAG_00464","SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003989"},{"annotations":[73379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004736"}]},"cv_name":"molecular_function","definition":"Catalysis of the joining of two molecules via a carbon-carbon bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.4.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00464":null,"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"ligase activity, forming carbon-carbon bonds","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016885","terms_by_termid":{"GO:0003989":null,"GO:0004736":null}}


id: GO:0021827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of olfactory bulb interneuron precursors in the cerebral cortex that occurs after birth.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","PMID:12626695","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"},{"relation_name":"is_a","term_name":"tangential migration from the subventricular zone to the olfactory bulb","termid":"GO:0022028"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron development","termid":"GO:0021891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postnatal olfactory bulb interneuron migration","termid":"GO:0021827"}


id: GO:0097397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-32 stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-32","termid":"GO:0097395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-32","synonyms":[{"name":"cellular response to IL-32","type":"exact"}],"termid":"GO:0097397"}


id: GO:0018587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete limonene 8-monooxygenase activity (obsolete GO:0018587)","synonyms":[{"name":"limonene 8-monooxygenase activity","type":"exact"}],"termid":"GO:0018587"}


id: GO:1903658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["PMID:25049409","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of type IV pilus biogenesis","termid":"GO:1903656"},{"relation_name":"positively_regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IV pilus biogenesis","synonyms":[{"name":"activation of TFP biogenesis","type":"narrow"},{"name":"activation of type 4 pilus biogenesis","type":"narrow"},{"name":"activation of type IV fimbria assembly","type":"narrow"},{"name":"activation of type IV fimbria biogenesis","type":"narrow"},{"name":"activation of type IV fimbriae assembly","type":"narrow"},{"name":"activation of type IV fimbriae biogenesis","type":"narrow"},{"name":"activation of type IV fimbrial assembly","type":"narrow"},{"name":"activation of type IV fimbrial biogenesis","type":"narrow"},{"name":"activation of type IV fimbrium assembly","type":"narrow"},{"name":"activation of type IV fimbrium biogenesis","type":"narrow"},{"name":"activation of type IV pilus biogenesis","type":"narrow"},{"name":"activation of type IV pilus biosynthesis","type":"narrow"},{"name":"positive regulation of TFP biogenesis","type":"exact"},{"name":"positive regulation of type 4 pilus biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbria assembly","type":"exact"},{"name":"positive regulation of type IV fimbria biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbriae assembly","type":"exact"},{"name":"positive regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbrial assembly","type":"exact"},{"name":"positive regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"positive regulation of type IV fimbrium assembly","type":"exact"},{"name":"positive regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"positive regulation of type IV pilus biosynthesis","type":"exact"},{"name":"up regulation of TFP biogenesis","type":"exact"},{"name":"up regulation of type 4 pilus biogenesis","type":"exact"},{"name":"up regulation of type IV fimbria assembly","type":"exact"},{"name":"up regulation of type IV fimbria biogenesis","type":"exact"},{"name":"up regulation of type IV fimbriae assembly","type":"exact"},{"name":"up regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"up regulation of type IV fimbrial assembly","type":"exact"},{"name":"up regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"up regulation of type IV fimbrium assembly","type":"exact"},{"name":"up regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"up regulation of type IV pilus biogenesis","type":"exact"},{"name":"up regulation of type IV pilus biosynthesis","type":"exact"},{"name":"up-regulation of TFP biogenesis","type":"exact"},{"name":"up-regulation of type 4 pilus biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbria assembly","type":"exact"},{"name":"up-regulation of type IV fimbria biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbriae assembly","type":"exact"},{"name":"up-regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbrial assembly","type":"exact"},{"name":"up-regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"up-regulation of type IV fimbrium assembly","type":"exact"},{"name":"up-regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"up-regulation of type IV pilus biogenesis","type":"exact"},{"name":"up-regulation of type IV pilus biosynthesis","type":"exact"},{"name":"upregulation of TFP biogenesis","type":"exact"},{"name":"upregulation of type 4 pilus biogenesis","type":"exact"},{"name":"upregulation of type IV fimbria assembly","type":"exact"},{"name":"upregulation of type IV fimbria biogenesis","type":"exact"},{"name":"upregulation of type IV fimbriae assembly","type":"exact"},{"name":"upregulation of type IV fimbriae biogenesis","type":"exact"},{"name":"upregulation of type IV fimbrial assembly","type":"exact"},{"name":"upregulation of type IV fimbrial biogenesis","type":"exact"},{"name":"upregulation of type IV fimbrium assembly","type":"exact"},{"name":"upregulation of type IV fimbrium biogenesis","type":"exact"},{"name":"upregulation of type IV pilus biogenesis","type":"exact"},{"name":"upregulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903658"}


id: MONDO:0100573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy where patients have both generalized and focal seizure types, with interictal and/or ictal EEG findings that accompany both seizure types. Patients with Dravet syndrome and Lennox-Gastaut syndrome may have combined focal and generalized epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"},{"relation_name":"is_a","term_name":"generalized epilepsy","termid":"MONDO:0100574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"combined generalized and focal epilepsy","secondary_identifiers":["UMLS:C5816884","MEDGEN:1836943"],"termid":"MONDO:0100573","xrefs":{"Monarch":{"xref_id":"0100573"}}}


id: MONDO:0012410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Finnish upper limb-onset distal myopathy is a rare, genetic distal myopathy characterized by slowly progressive distal to proximal limb muscle weakness and atrophy, with characteristic early involvement of thenar and hypothenar muscles. Patients present with clumsiness of the hands and stumbling in the fourth to fifth decade of life, and later develop steppage gait and contractures of the hands. Progressive fatty degeneration affects intrinsic muscles of the hands, gluteus medium and both anterior and posterior compartment muscles of the distal lower extremities, with later involvement of forearm muscles, triceps, infraspinatus and the proximal lower limb muscles. Asymmetry of muscle involvement is common.","definition_xrefs":["Orphanet:399086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"Finnish upper limb-onset distal myopathy","secondary_identifiers":["UMLS:C1864706","DOID:0111189","MEDGEN:400595","SCTID:763718009","GARD:17652","OMIM:610099"],"synonyms":[{"name":"MPD3","type":"exact"},{"name":"distal myopathy type 3","type":"exact"},{"name":"myopathy, distal, 3","type":"related"}],"termid":"MONDO:0012410","xrefs":{"Monarch":{"xref_id":"0012410"}}}


id: MONDO:1010025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wolff-Parkinson-White syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolff-Parkinson-White syndrome, non-human animal","secondary_identifiers":["OMIA:001194"],"termid":"MONDO:1010025","xrefs":{"Monarch":{"xref_id":"1010025"}}}


id: PBO:0112613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in isoprenoid or sterol metabolism","termid":"PBO:0112613"}


id: PBO:0080351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 3, pseudogene","termid":"PBO:0080351"}


id: MONDO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding disorder, platelet-type, 21","secondary_identifiers":["GARD:16230","OMIM:617443","MEDGEN:1386863","UMLS:C4479515"],"synonyms":[{"name":"BDPLT21","type":"related"},{"name":"bleeding disorder, platelet-type, 21","type":"exact"}],"termid":"MONDO:0054577","xrefs":{"Monarch":{"xref_id":"0054577"}}}


id: PBO:0080689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 1","termid":"PBO:0080689"}


id: PBO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase Mri1 (predicted)","termid":"PBO:0018061"}


id: MONDO:0009539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoblastic leukemia, acute, with lymphomatous features","secondary_identifiers":["OMIM:247640","MESH:C565429","UMLS:C1855472","MEDGEN:340879"],"synonyms":[{"name":"lall","type":"related"},{"name":"leukemia, acute lymphoblastic","type":"exact"},{"name":"lymphoblastic leukemia, acute, with lymphomatous features","type":"exact"},{"name":"lymphomatous All","type":"related"}],"termid":"MONDO:0009539","xrefs":{"Monarch":{"xref_id":"0009539"}}}


id: GO:0044826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The insertion into a host genome of viral DNA, usually by the action of an integrase enzyme. Once integrated, the provirus persists in the host cell and serves as a template for the transcription of viral genes and replication of the viral genome, leading to the production of new viruses.","definition_xrefs":["PMID:19091057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome integration into host DNA","synonyms":[{"name":"viral genome integration","type":"exact"}],"termid":"GO:0044826"}


id: MONDO:0006306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast carcinoma characterized by the presence of a lobular and a ductal component. The ductal component comprises less than 50 percent of the tumor.","definition_xrefs":["NCIT:C5160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mixed lobular and ductal breast carcinoma","secondary_identifiers":["ICD9:174.8","ONCOTREE:MDLC","SCTID:444604002","UMLS:C5441546","EFO:1000382","MEDGEN:1779609"],"synonyms":[{"name":"breast mixed ductal and lobular carcinoma","type":"related"},{"name":"ductal and lobular carcinoma","type":"exact"},{"name":"mixed ductal and lobular breast carcinoma","type":"exact"},{"name":"mixed ductal and lobular carcinoma of breast","type":"exact"},{"name":"mixed ductal and lobular carcinoma of the breast","type":"exact"},{"name":"mixed lobular and ductal breast carcinoma","type":"exact"},{"name":"mixed lobular and ductal carcinoma","type":"exact"},{"name":"mixed lobular and ductal carcinoma of breast","type":"exact"},{"name":"mixed lobular and ductal carcinoma of the breast","type":"exact"}],"termid":"MONDO:0006306","xrefs":{"Monarch":{"xref_id":"0006306"}}}


id: MONDO:1012941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in cattle due to a mutation in the MYH3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, cattle","termid":"MONDO:1010530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, MYH3-related, cattle","secondary_identifiers":["OMIA:002590-9913"],"termid":"MONDO:1012941","xrefs":{"Monarch":{"xref_id":"1012941"}}}


id: PATO:0001651
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance to a stimulus which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"resistant to","termid":"PATO:0001178"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased resistance to","synonyms":[{"name":"decreased resistance","type":"exact"},{"name":"low resistance to","type":"exact"}],"termid":"PATO:0001651"}


id: PBO:0074920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 89","termid":"PBO:0074920"}


id: PBO:0031853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_hydrogen_sulfide_biosynthesis","termid":"PBO:0031853"}


id: PBO:0068447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 21, pseudogene","termid":"PBO:0068447"}


id: PBO:0052643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 11","termid":"PBO:0052643"}


id: PBO:0080222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIPR1 antisense RNA 1","termid":"PBO:0080222"}


id: PBO:0110431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WTAP pseudogene 1","termid":"PBO:0110431"}


id: PATO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobility","termid":"PATO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immobile","synonyms":[{"name":"fixed","type":"related"}],"termid":"PATO:0000300"}


id: GO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle contraction","termid":"GO:0006937"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle contraction","termid":"GO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle contraction","synonyms":[{"name":"activation of muscle contraction","type":"narrow"},{"name":"stimulation of muscle contraction","type":"narrow"},{"name":"up regulation of muscle contraction","type":"exact"},{"name":"up-regulation of muscle contraction","type":"exact"},{"name":"upregulation of muscle contraction","type":"exact"}],"termid":"GO:0045933"}


id: GO:1905404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activated CD8-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905402"},{"relation_name":"positively_regulates","term_name":"activated CD8-positive, alpha-beta T cell apoptotic process","termid":"GO:1905397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"positive regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"up-regulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"upregulation of activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905404"}


id: PBO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase II Gls2","termid":"PBO:0001185"}


id: GO:1902485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-cysteine.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:12941942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"L-cysteine binding","termid":"GO:1902485"}


id: PBO:0079989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 27","termid":"PBO:0079989"}


id: GO:0047641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucitol 6-phosphate + NADP+ = D-glucose 6-phosphate + H+ + NADPH.","definition_xrefs":["EC:1.1.1.200","RHEA:20037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aldose-6-phosphate reductase (NADPH) activity","secondary_identifiers":["MetaCyc:ALDOSE-6-PHOSPHATE-REDUCTASE-NADPH-RXN","KEGG_REACTION:R00834"],"synonyms":[{"name":"A6PR","type":"related"},{"name":"D-aldose-6-phosphate:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-dependent D-sorbitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"NADP-dependent aldose 6-phosphate reductase activity","type":"related"},{"name":"alditol 6-phosphate:NADP 1-oxidoreductase activity","type":"related"},{"name":"aldose 6-phosphate reductase activity","type":"related"},{"name":"aldose-6-P reductase activity","type":"related"},{"name":"aldose-6-phosphate reductase activity","type":"related"}],"termid":"GO:0047641"}


id: MONDO:0008994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cleidocranial dysplasia 1","termid":"MONDO:0007340"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cleidocranial dysplasia, recessive form","secondary_identifiers":["MESH:C565843","MEDGEN:395170","UMLS:C1859080","GARD:10623","OMIM:216330"],"synonyms":[{"name":"autosomal recessive form of cleidocranial dysostosis","type":"related"},{"name":"cleidocranial dysplasia recessive form","type":"related"},{"name":"cleidocranial dysplasia, recessive form","type":"exact"}],"termid":"MONDO:0008994","xrefs":{"Monarch":{"xref_id":"0008994"}}}


id: PBO:0072011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 13","termid":"PBO:0072011"}


id: PBO:0082982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ubiquitin-protein ligase (E3); component of the Mub1p-Ubr2p-Rad6p ubiquitin ligase complex required for the ubiquitination and degradation of Rpn4p; mediates formation of the ternary complex","termid":"PBO:0082982"}


id: MONDO:0016260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant heterologous neoplasm with skeletal muscle differentiation arising from the uterine corpus. It usually manifests with vaginal bleeding. The prognosis is poor.","definition_xrefs":["NCIT:C127058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed endometrial stromal and smooth muscle tumor","termid":"MONDO:0004526"},{"relation_name":"is_a","term_name":"uterine corpus sarcoma","termid":"MONDO:0005210"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus rhabdomyosarcoma","secondary_identifiers":["GARD:20475","MEDGEN:925579","Orphanet:213615","UMLS:C4288047"],"synonyms":[{"name":"body of uterus rhabdomyosarcoma","type":"exact"},{"name":"body of uterus rhabdomyosarcoma (disease)","type":"exact"},{"name":"rhabdomyosarcoma (disease) of body of uterus","type":"exact"},{"name":"rhabdomyosarcoma of the corpus uteri","type":"related"},{"name":"uterine corpus rhabdomyosarcoma","type":"exact"}],"termid":"MONDO:0016260","xrefs":{"Monarch":{"xref_id":"0016260"}}}


id: MONDO:0007995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated microphthalmia","termid":"MONDO:0000062"},{"relation_name":"is_a","term_name":"isolated anophthalmia-microphthalmia syndrome","termid":"MONDO:0016764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with cataract 1","secondary_identifiers":["UMLS:C1834919","MESH:C563582","MEDGEN:320475","OMIM:156850"],"synonyms":[{"name":"MCOPCT1","type":"exact"},{"name":"cataract, congenital, with microphthalmia","type":"related"},{"name":"congenital cataract with microphthalmia","type":"related"},{"name":"microphthalmia with cataract 1","type":"related"},{"name":"microphthalmia, isolated, with cataract 1","type":"exact"}],"termid":"MONDO:0007995","xrefs":{"Monarch":{"xref_id":"0007995"}}}


id: MONDO:0010610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare and fatal central nervous system malformation occurring during embryogenesis, presenting prenatally with holoprosencephaly and fetal hypokinesia as major features. Other manifestations include microcephaly, multiple contractures and intrauterine growth restriction. An X-linked recessive inheritance has been suggested.","definition_xrefs":["Orphanet:2570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly-hypokinesia-congenital contractures syndrome","secondary_identifiers":["GARD:3788","SCTID:716169009","UMLS:C1844016","ICD10CM:Q04.2","MESH:C564409","OMIM:306990","MEDGEN:336097"],"synonyms":[{"name":"Morse-Rawnsley-Sargent syndrome","type":"exact"},{"name":"holoprosencephaly with fetal akinesia/hypokinesia sequence","type":"related"},{"name":"holoprosencephaly with foetal akinesia/hypokinesia sequence","type":"related"},{"name":"holoprosencephaly-fetal akinesia/hypokinesia sequence syndrome","type":"exact"}],"termid":"MONDO:0010610","xrefs":{"Monarch":{"xref_id":"0010610"}}}


id: MONDO:0020445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Agenesis of the superior vena cava (SVC) is a rare congenital anomaly of the great veins characterized by unilateral or bilateral complete absence of the SVC. Unilateral agenesis is mainly asymptomatic (most of the time diagnosed incidentally) and patients usually have otherwise normal heart structure. Bilateral agenesis, however, is frequently associated with other congenital cardiac anomalies and/or conduction abnormalities (such as tetralogy of Fallot, atrial septal defect) and typically present symptoms of SVC syndrome.","definition_xrefs":["Orphanet:99114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of the superior vena cava","secondary_identifiers":["MEDGEN:539590","SCTID:204464007","GARD:19657","UMLS:C0265929","ICD9:747.49"],"synonyms":[{"name":"absence of the SVC","type":"exact"},{"name":"absence of the superior caval vein","type":"exact"},{"name":"absence of the superior vena cava","type":"exact"},{"name":"agenesis of the SVC","type":"exact"},{"name":"agenesis of the superior caval vein","type":"exact"}],"termid":"MONDO:0020445","xrefs":{"Monarch":{"xref_id":"0020445"}}}


id: MONDO:0005294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder affecting blood flow through the veins or arteries outside of the heart.","definition_xrefs":["NCIT:C35136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral vascular disease","secondary_identifiers":["MESH:D016491","DOID:341","MEDGEN:38790","UMLS:C0085096","EFO:0003875","ICD9:443.81","MESH:D016481"],"synonyms":[{"name":"arterial occlusive disease","type":"exact"},{"name":"disease, peripheral vascular","type":"exact"},{"name":"peripheral vascular disorder","type":"exact"},{"name":"vascular disease, peripheral","type":"exact"}],"termid":"MONDO:0005294","xrefs":{"Monarch":{"xref_id":"0005294"}}}


id: PBO:0068451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 27, pseudogene","termid":"PBO:0068451"}


id: PBO:0070987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 11","termid":"PBO:0070987"}


id: SO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA that specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H_ACA_box_snoRNA","termid":"SO:0000594"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylation_guide_snoRNA","synonyms":[{"name":"pseudouridylation guide snoRNA","type":"exact"}],"termid":"SO:0001187"}


id: GO:0046166
data:
  {"annotated_genes":["SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72456],"is_not":false,"summary":null,"term":"GO:0046166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"glyceraldehyde 3-phosphate biosynthesis","type":"exact"},{"name":"glyceraldehyde 3-phosphate biosynthetic process","type":"exact"},{"name":"glyceraldehyde-3-phosphate anabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate biosynthesis","type":"exact"},{"name":"glyceraldehyde-3-phosphate formation","type":"exact"},{"name":"glyceraldehyde-3-phosphate synthesis","type":"exact"}],"termid":"GO:0046166","terms_by_termid":{"GO:0046166":null}}


id: PBO:0084792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; required for normal mitochondrial morphology and inheritance; component of the mitochondria-ER-cortex-anchor (MECA); interacts with Num1p to link the ER and mitochondria at the cell cortex; proposed involvement in the formation of Dnm1p and Num1p-containing cortical anchor complexes that promote mitochondrial fission","termid":"PBO:0084792"}


id: PBO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A7","termid":"PBO:0047004"}


id: GO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid inner membrane (obsolete GO:0031353)","synonyms":[{"name":"integral to plastid inner membrane","type":"narrow"}],"termid":"GO:0031353"}


id: GO:0002631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of granuloma formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chronic inflammatory response","termid":"GO:0002676"},{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"regulates","term_name":"granuloma formation","termid":"GO:0002432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of granuloma formation","termid":"GO:0002631"}


id: MONDO:0044202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal kinesigenic dyskinesia (PKD) is a form of paroxysmal dyskinesia, characterized by recurrent brief involuntary hyperkinesias, such as choreoathetosis, ballism, athetosis or dystonia, triggered by sudden movements.","definition_xrefs":["Orphanet:98809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"episodic kinesigenic dyskinesia","secondary_identifiers":["UMLS:C1868682","GARD:8721","MEDGEN:358268","OMIMPS:128200"],"synonyms":[{"name":"EKD","type":"broad"},{"name":"familial PKD","type":"exact"},{"name":"familial paroxysmal kinesigenic dyskinesia","type":"exact"},{"name":"paroxysmal kinesigenic choreathetosis","type":"exact"}],"termid":"MONDO:0044202","xrefs":{"Monarch":{"xref_id":"0044202"}}}


id: PBO:0088044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme involved in ERAD; located at the cytosolic side of the ER membrane; tail region contains a transmembrane segment at the C-terminus; substrate of the ubiquitin-proteasome pathway; ER-associated protein degradation is also known as ERAD","termid":"PBO:0088044"}


id: GO:0002544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Inflammation of prolonged duration (weeks or months) in which active inflammation, tissue destruction, and attempts at repair are proceeding simultaneously. Although it may follow acute inflammation, chronic inflammation frequently begins insidiously, as a low-grade, smoldering, often asymptomatic response.","definition_xrefs":["GO_REF:0000022","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response","termid":"GO:0002544"}


id: PBO:0057338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 524","termid":"PBO:0057338"}


id: GO:0035269
data:
  {"annotated_genes":["SJAG_01264","SJAG_04316","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93378,101861,106287],"is_not":false,"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The transfer of mannose from dolichyl activated mannose to the hydroxyl group of a seryl or threonyl residue of a protein acceptor molecule, to form an O-linked protein-sugar linkage.","definition_xrefs":["PMID:9878797","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"protein mannosylation","termid":"GO:0035268"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0008150","GO:0006486"],"is_obsolete":false,"name":"protein O-linked mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein amino acid O-linked mannosylation","type":"exact"}],"termid":"GO:0035269","terms_by_termid":{"GO:0035269":null}}


id: MONDO:0012693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glycogen storage disease characterized by muscle and heart glycogen deficiency. It has been described in three siblings (two brothers and their younger sister). The older brother died at 10.5 years of age as a result of sudden cardiac arrest and the younger brother presented with hypertrophic cardiomyopathy, abnormal heart rate and blood pressure during exercise, and muscle fatigability. The sister showed no symptoms but a lack of glycogen was identified through muscle biopsy. The syndrome is caused by homozygous missense mutations in the gene encoding muscle glycogen synthase.","definition_xrefs":["Orphanet:137625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to muscle and heart glycogen synthase deficiency","secondary_identifiers":["SCTID:725027004","UMLS:C1969054","GARD:10760","MEDGEN:409741","MESH:C566917","NANDO:2201152","OMIM:611556"],"synonyms":[{"name":"GSD 0B","type":"related"},{"name":"GSD due to muscle and heart glycogen synthase deficiency","type":"exact"},{"name":"GSD type 0b","type":"exact"},{"name":"GSD0B","type":"related"},{"name":"glycogen storage disease 0, muscle","type":"related"},{"name":"glycogen storage disease due to glycogen synthase deficiency of heart","type":"exact"},{"name":"glycogen storage disease type 0, muscle","type":"related"},{"name":"glycogen storage disease type 0b","type":"exact"},{"name":"glycogenosis due to muscle and heart glycogen synthase deficiency","type":"exact"},{"name":"glycogenosis type 0b","type":"exact"},{"name":"heart glycogen storage disease due to glycogen synthase deficiency","type":"exact"},{"name":"muscle glycogen storage disease 0","type":"related"},{"name":"muscle glycogen synthase deficiency","type":"related"}],"termid":"MONDO:0012693","xrefs":{"Monarch":{"xref_id":"0012693"}}}


id: PBO:0091895
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterologously expressed Wtf4 poison is toxic to S. cerevisiae vegetative cells, and rescued by Wtf4 antidote","termid":"PBO:0091895"}


id: MONDO:0009762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus, congenital, autosomal recessive","secondary_identifiers":["OMIM:257400","MEDGEN:462921","UMLS:C3151571","DOID:0111797","MESH:C564938"],"synonyms":[{"name":"Nystagmus, congenital motor, autosomal recessive","type":"related"},{"name":"nystagmus, congenital, autosomal recessive","type":"exact"}],"termid":"MONDO:0009762","xrefs":{"Monarch":{"xref_id":"0009762"}}}


id: GO:0072339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactam biosynthetic process","synonyms":[{"name":"cellular lactam anabolism","type":"exact"},{"name":"cellular lactam biosynthesis","type":"exact"},{"name":"cellular lactam biosynthetic process","type":"exact"},{"name":"cellular lactam formation","type":"exact"},{"name":"cellular lactam synthesis","type":"exact"}],"termid":"GO:0072339"}


id: PBO:0109830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tcg1","termid":"PBO:0109830"}


id: PBO:0044154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD phosphatase subunit 1","termid":"PBO:0044154"}


id: MONDO:0020762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic-mesencephalic junction dysplasia","termid":"MONDO:0017868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diencephalic-mesencephalic junction dysplasia syndrome 2","secondary_identifiers":["OMIM:618646","UMLS:C5231440","MEDGEN:1684846"],"synonyms":[{"name":"DMJDS2","type":"exact"},{"name":"spastic tetraparesis, dystonia, developmental delay, and structural abnormalities of the basal ganglia","type":"related"}],"termid":"MONDO:0020762","xrefs":{"Monarch":{"xref_id":"0020762"}}}


id: GO:0070638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any pyridine nucleoside, a nucleoside in which a pyridine base covalently bonded to a sugar, usually ribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyridine nucleoside catabolic process","synonyms":[{"name":"pyridine nucleoside breakdown","type":"exact"},{"name":"pyridine nucleoside catabolism","type":"exact"},{"name":"pyridine nucleoside degradation","type":"exact"}],"termid":"GO:0070638"}


id: MONDO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sucrose intolerance disease (obsolete MONDO:0045021)","secondary_identifiers":["ICD9:271.3","SCTID:190753003"],"synonyms":[{"name":"sucrose intolerance","type":"exact"}],"termid":"MONDO:0045021","xrefs":{"Monarch":{"xref_id":"0045021"}}}


id: FYPO:0000116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to zinc ions. Cells stop growing (and may die) at a concentration of zinc ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to zinc","synonyms":[{"name":"hypersensitive to zinc","type":"exact"},{"name":"sensitive to zinc during mitotic cell cycle","type":"related"},{"name":"sensitive to zinc during vegetative growth","type":"exact"},{"name":"sensitive to zinc ions","type":"exact"}],"termid":"FYPO:0000116"}


id: PBO:0053473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 442","termid":"PBO:0053473"}


id: _global:involved_in_or_involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"_global:acts_upstream_of_or_within"},{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_or_involved_in_regulation_of","secondary_identifiers":["RO:0002431"],"termid":"_global:involved_in_or_involved_in_regulation_of"}


id: PBO:0080815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 5","termid":"PBO:0080815"}


id: PBO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily B member 1","termid":"PBO:0052111"}


id: MONDO:0013249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the PTPRQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 84A","secondary_identifiers":["UMLS:C3150654","DOID:0110529","GARD:22634","MEDGEN:462004","OMIM:613391"],"synonyms":[{"name":"DFNB84A","type":"narrow"},{"name":"PTPRQ autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 84A","type":"narrow"},{"name":"autosomal recessive deafness 84A with vestibular dysfunction","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 84A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in PTPRQ","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 84A","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 84A","type":"exact"},{"name":"deafness, autosomal recessive 84","type":"narrow"},{"name":"deafness, autosomal recessive 84A","type":"narrow"},{"name":"deafness, autosomal recessive 84A, with vestibular dysfunction","type":"narrow"},{"name":"deafness, autosomal recessive 84a","type":"narrow"},{"name":"deafness, autosomal recessive type 84A","type":"narrow"}],"termid":"MONDO:0013249","xrefs":{"Monarch":{"xref_id":"0013249"}}}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_00106","SJAG_04156","SJAG_03275","SJAG_02408","SJAG_00815","SJAG_02225","SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57102,60678,69310,105107,106405,108660,112720],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0042559","GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: GO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the beta subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-12 beta subunit binding","synonyms":[{"name":"CLMFp40 binding","type":"exact"},{"name":"IL-12B binding","type":"exact"},{"name":"IL-12p40 binding","type":"exact"},{"name":"NKSFp40 binding","type":"exact"}],"termid":"GO:0042163"}


id: FYPO:0004353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic S phase","synonyms":[{"name":"increased protein phosphorylation during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic S-phase","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitotic S phase","type":"exact"}],"termid":"FYPO:0004353"}


id: MONDO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the Bartholin gland. It usually affects women over fifty and presents with enlargement of the Bartholin gland. Various histologic subtypes have been identified and include adenocarcinoma, squamous cell carcinoma, adenoid cystic carcinoma, adenosquamous carcinoma, transitional cell carcinoma, and small cell carcinoma.","definition_xrefs":["NCIT:C9055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system cancer","termid":"MONDO:0000653"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"},{"relation_name":"is_a","term_name":"Bartholin gland neoplasm","termid":"MONDO:0021114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bartholin gland carcinoma","secondary_identifiers":["HP:0030419","DOID:3999","UMLS:C0349561","SCTID:276876007","DOID:60003","MEDGEN:83888","EFO:1000103"],"synonyms":[{"name":"Bartholin gland cancer","type":"exact"},{"name":"Bartholin gland carcinoma (disease)","type":"exact"},{"name":"Bartholin's gland cancer","type":"exact"},{"name":"Bartholin's gland carcinoma","type":"exact"},{"name":"bartholin gland carcinoma","type":"exact"},{"name":"carcinoma of Bartholin's gland","type":"exact"},{"name":"carcinoma of major vestibular gland","type":"exact"},{"name":"carcinoma of the Bartholin's gland","type":"exact"},{"name":"major vestibular gland carcinoma","type":"exact"}],"termid":"MONDO:0002829","xrefs":{"Monarch":{"xref_id":"0002829"}}}


id: MONDO:0020617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--ok (obsolete MONDO:0020617)","secondary_identifiers":["OMIM:111380"],"synonyms":[{"name":"BLOOD GROUP--OK","type":"related"},{"name":"OK","type":"related"},{"name":"blood group, OK","type":"exact"}],"termid":"MONDO:0020617","xrefs":{"Monarch":{"xref_id":"0020617"}}}


id: MONDO:0020034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of respiratory tract neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare respiratory tract neoplasm (obsolete MONDO:0020034)","secondary_identifiers":["Orphanet:98060"],"synonyms":[{"name":"rare respiratory cancer","type":"narrow"},{"name":"rare respiratory neoplasm","type":"exact"},{"name":"rare respiratory tract neoplasm","type":"exact"},{"name":"rare respiratory tumor","type":"exact"}],"termid":"MONDO:0020034","xrefs":{"Monarch":{"xref_id":"0020034"}}}


id: PR:O60173
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX31 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.04","secondary_identifiers":["UniProtKB:O60173"],"synonyms":[{"name":"Spom972h-DDX31","type":"exact"}],"termid":"PR:O60173"}


id: MOD:01712
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance groups.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01712"}


id: PBO:0043638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPRS pseudogene 1","termid":"PBO:0043638"}


id: GO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus that regulates the process of pheromone-induced unidirectional conjugation.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pheromone","termid":"GO:0019236"},{"relation_name":"regulates","term_name":"pheromone-induced unidirectional conjugation","termid":"GO:0000762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pheromone regulating pheromone-induced unidirectional conjugation","synonyms":[{"name":"response to pheromone during pheromone-induced unidirectional","type":"related"}],"termid":"GO:0000765"}


id: GO:0035681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 15.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"toll-like receptor 15 signaling pathway","synonyms":[{"name":"TLR15 signaling pathway","type":"exact"},{"name":"toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:0035681"}


id: MONDO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An bursitis involving a pathogenic inflammatory response in the calcaneal tendon.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bursitis","termid":"MONDO:0002471"},{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"},{"relation_name":"is_a","term_name":"skeletal ligament disorder","termid":"MONDO:0045004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Achilles bursitis","secondary_identifiers":["icd11.foundation:426746156","ICD9:726.71","DOID:12857","MEDGEN:508442","UMLS:C0149846"],"synonyms":[{"name":"Achilles bursitis or tendinitis","type":"exact"},{"name":"Haglund's deformity","type":"exact"},{"name":"Haglund's disease","type":"exact"},{"name":"capped hock","type":"exact"}],"termid":"MONDO:0001594","xrefs":{"Monarch":{"xref_id":"0001594"}}}


id: GO:0052833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:1D-myo-inositol 4-phosphate + H2O = myo-inositol + phosphate.","definition_xrefs":["RHEA:30735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol monophosphate phosphatase activity","termid":"GO:0052834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"inositol monophosphate 4-phosphatase activity","secondary_identifiers":["MetaCyc:RXN-10952","Reactome:R-HSA-1855211"],"synonyms":[{"name":"inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-monophosphatase activity","type":"broad"},{"name":"myo-inositol-1(or 4)-phosphate phosphohydrolase activity","type":"broad"}],"termid":"GO:0052833"}


id: PBO:0042541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 8","termid":"PBO:0042541"}


id: PBO:0047589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen gamma chain","termid":"PBO:0047589"}


id: GO:0002071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for a glandular epithelial cell to attain its fully functional state. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell maturation","termid":"GO:0002069"},{"relation_name":"part_of","term_name":"glandular epithelial cell development","termid":"GO:0002068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell maturation","termid":"GO:0002071"}


id: PBO:0071709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 7","termid":"PBO:0071709"}


id: PBO:0048195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 intronic transcript","termid":"PBO:0048195"}


id: PBO:0069121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 370, pseudogene","termid":"PBO:0069121"}


id: GO:0140259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PRC1 complex.","definition_xrefs":["PMID:15280237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"PRC1 complex binding","termid":"GO:0140259"}


id: PBO:0084600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YKL200C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YKL201C","termid":"PBO:0084600"}


id: PBO:0041591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5A","termid":"PBO:0041591"}


id: MONDO:0019844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"}],"gene_count":0,"genotype_count":0,"name":"obsolete pituitary hormone deficiency secondary to storage disease (obsolete MONDO:0019844)","secondary_identifiers":["Orphanet:95618"],"termid":"MONDO:0019844","xrefs":{"Monarch":{"xref_id":"0019844"}}}


id: MONDO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood mature teratoma of the ovary","secondary_identifiers":["DOID:6229","NCIT:C6548","UMLS:C1332991","MEDGEN:232354"],"synonyms":[{"name":"childhood mature ovarian teratoma","type":"exact"},{"name":"childhood mature teratoma of ovary","type":"exact"},{"name":"childhood ovarian mature teratoma","type":"exact"},{"name":"mature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric mature ovarian teratoma","type":"exact"},{"name":"paediatric mature teratoma of ovary","type":"exact"},{"name":"paediatric mature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian mature teratoma","type":"exact"},{"name":"pediatric mature ovarian teratoma","type":"exact"},{"name":"pediatric mature teratoma of ovary","type":"exact"},{"name":"pediatric mature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian mature teratoma","type":"exact"}],"termid":"MONDO:0003818","xrefs":{"Monarch":{"xref_id":"0003818"}}}


id: MONDO:0008033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant limb-girdle muscular dystrophy type 1B (LGMD1B) is a subtype of autosomal dominant limb girdle muscular dystrophy characterized by a variable age of onset of progressive shoulder and hip girdle weakness, with inferior limbs usually being affected prior to upper limbs, and mild joint contractures. LGMD1B is also associated with cardiac dysrhythmias, including atrioventricular conduction blocks, and late-onset dilated cardiomyopathy, that may lead to sudden death.","definition_xrefs":["Orphanet:264"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1B (obsolete MONDO:0008033)","termid":"MONDO:0008033","xrefs":{"Monarch":{"xref_id":"0008033"}}}


id: PomGeneEx:0000009
data:
  {"annotated_genes":["SJAG_01143","SJAG_00118"],"annotation_feature_type":"gene","cv_annotations":{"qualitative_gene_expression":[{"annotations":[119588,119569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"PomGeneEx:0000011"}]},"cv_name":"PomGeneExRNA","definition":"A qualifier that describes a level of RNA observed under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null},"genotype_count":0,"is_obsolete":false,"name":"RNA expression level","references_by_uniquename":{"PMID:25866389":null},"termid":"PomGeneEx:0000009","terms_by_termid":{"GO:0000087":null,"PomGeneEx:0000011":null}}


id: GO:0097425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the smooth endoplasmic reticulum (also called smooth ER, or SER).","definition_xrefs":["NIF_Subcellular:sao184202831"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth endoplasmic reticulum part (obsolete GO:0097425)","synonyms":[{"name":"SER subcomponent","type":"related"}],"termid":"GO:0097425"}


id: MONDO:0003944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising endobronchially. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"lung leiomyoma","termid":"MONDO:0003293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endobronchial leiomyoma","secondary_identifiers":["DOID:6608","MEDGEN:232455","UMLS:C1333386"],"synonyms":[{"name":"bronchus lung leiomyoma","type":"exact"},{"name":"endobronchial leiomyoma","type":"exact"},{"name":"lung leiomyoma of bronchus","type":"exact"}],"termid":"MONDO:0003944","xrefs":{"Monarch":{"xref_id":"0003944"}}}


id: PBO:0066332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 1","termid":"PBO:0066332"}


id: PBO:0034786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER phosphatidate cytidylyltransferase","termid":"PBO:0034786"}


id: PBO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1 Interacting Protein","termid":"PBO:0000303"}


id: PBO:0053890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1170","termid":"PBO:0053890"}


id: GO:0060644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell becomes a more specialized epithelial cell of the mammary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland epithelial cell differentiation","termid":"GO:0060644"}


id: PBO:0079248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC21B antisense RNA 1","termid":"PBO:0079248"}


id: FYPO:0004609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more spindle pole bodies (SPBs) than normal during one or both meiotic nuclear divisions. In this phenotype, extra SPBs typically contain normal components but seldom attach to spindle microtubules.","definition_xrefs":["PomBase:mah","PMID:15569158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"increased meiotic spindle pole body duplication","termid":"FYPO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during meiosis","synonyms":[{"name":"SPBs present in increased numbers during meiosis","type":"exact"},{"name":"excess meiotic spindle pole bodies present","type":"exact"},{"name":"excess spindle pole bodies present during meiosis","type":"exact"},{"name":"extra spindle pole bodies present during meiosis","type":"exact"},{"name":"pseudo-SPBs present during meiosis","type":"exact"},{"name":"spindle pole bodies present in greater numbers during meiosis","type":"exact"},{"name":"spindle pole bodies present in increased numbers during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004609"}


id: PBO:0085775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein lysine methyltransferase; monomethylates Lys-46 of the ribosomal large subunit Rpl1a/Rpl1b; member of the seven beta-strand methyltransferase superfamily; orthologs only found among fungal species","termid":"PBO:0085775"}


id: PR:O74343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridylate synthase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03082","PRO:DNx","PANTHER:PTHR13326:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase C1A4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.09","secondary_identifiers":["UniProtKB:O74343"],"synonyms":[{"name":"Spom972h-PUS7","type":"exact"}],"termid":"PR:O74343"}


id: MONDO:0850008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment developmental abnormality with extraocular manifestations","secondary_identifiers":["Orphanet:519276","MEDGEN:1842782","GARD:22084","UMLS:C5681394"],"termid":"MONDO:0850008","xrefs":{"Monarch":{"xref_id":"0850008"}}}


id: PBO:0005769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L17 (predicted)","termid":"PBO:0005769"}


id: PBO:0067388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 493, pseudogene","termid":"PBO:0067388"}


id: GO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: spermidine + acceptor + H2O = 1,3-diaminopropane + 4-aminobutanal + reduced acceptor.","definition_xrefs":["MetaCyc:SPERMIDINE-DEHYDROGENASE-RXN","EC:1.5.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"spermidine dehydrogenase activity","secondary_identifiers":["RHEA:14273"],"synonyms":[{"name":"spermidine:(acceptor) oxidoreductase activity","type":"related"},{"name":"spermidine:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0050289"}


id: MONDO:0024227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A miliaria that is characterized by pustules resulting from inflammation and bacterial infection.","definition_xrefs":["DOID:0070319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria pustulosa","secondary_identifiers":["UMLS:C0026114","MEDGEN:507949","SCTID:26988005"],"termid":"MONDO:0024227","xrefs":{"Monarch":{"xref_id":"0024227"}}}


id: MONDO:0700268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the BRCA1 gene. Germline pathogenic or likely pathogenic variants in the BRCA1 gene confer an autosomal dominant predisposition to hereditary breast and ovarian cancer. Tumor formation at other sites, including pancreatic cancer have been described.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1-related cancer predisposition","termid":"MONDO:0700268","xrefs":{"Monarch":{"xref_id":"0700268"}}}


id: PBO:0028293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-syntelic_kinetochore_attachment_during_mitosis","termid":"PBO:0028293"}


id: GO:0046371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-mannose, a substance composed of mannose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dTDP-mannose metabolic process","synonyms":[{"name":"dTDP-mannose metabolism","type":"exact"}],"termid":"GO:0046371"}


id: FYPO:0000795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased glycerol dehydrogenase activity","synonyms":[{"name":"reduced glycerol dehydrogenase activity","type":"exact"}],"termid":"FYPO:0000795"}


id: MONDO:0007125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental abnormality in which the bottom of the tongue is attached to the floor of the mouth.","definition_xrefs":["NCIT:C124538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyloglossia","secondary_identifiers":["ICD10CM:Q38.1","OMIM:106280","ICD9:750.0","MEDGEN:56288","icd11.foundation:1838543063","SCTID:67787004","MESH:D000072676","MESH:C562396","UMLS:C0152415","DOID:0060604"],"synonyms":[{"name":"'tongue-Tie'","type":"related"},{"name":"FUSED to floor of mouth","type":"exact"},{"name":"ankyloglossia","type":"exact"},{"name":"tongue-tie","type":"exact"}],"termid":"MONDO:0007125","xrefs":{"Monarch":{"xref_id":"0007125"}}}


id: MONDO:1012203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteodystrophy, non-human animal","termid":"MONDO:1011951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, domestic cat","secondary_identifiers":["OMIA:000753-9685"],"termid":"MONDO:1012203","xrefs":{"Monarch":{"xref_id":"1012203"}}}


id: PBO:0004783
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae YJR086W is not functional ortholog","termid":"PBO:0004783"}


id: GO:0140886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of interferon-mediated signaling in the host organism.","definition_xrefs":["PMID:34305858","PMID:33097660","PMID:31266861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","synonyms":[{"name":"inhibition of host interferon signaling pathway by symbiont","type":"related"},{"name":"negative regulation by virus of host interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by symbiont of host IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by symbiont of host interferon-mediated signalling pathway","type":"exact"},{"name":"suppression by virus of host interferon-mediated signaling pathway","type":"narrow"}],"termid":"GO:0140886"}


id: PBO:0060063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 10","termid":"PBO:0060063"}


id: PBO:0058518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5706","termid":"PBO:0058518"}


id: GO:0050024
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-galactono-1,4-lactone + O2 = L-ascorbate + H2O2 + H+.","definition_xrefs":["RHEA:20617","EC:1.3.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-galactonolactone oxidase activity","secondary_identifiers":["GO:0033733","KEGG_REACTION:R00643","MetaCyc:1.3.3.12-RXN"],"synonyms":[{"name":"L-galactono-1,4-lactone oxidase activity","type":"related"},{"name":"L-galactono-1,4-lactone:oxygen 3-oxidoreductase activity","type":"related"},{"name":"L-xylono-1,4-lactone oxidase activity","type":"related"}],"termid":"GO:0050024"}


id: PBO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch 2 N-terminal like C","termid":"PBO:0061260"}


id: PR:O60187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sid4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom972h-sid4","type":"exact"}],"termid":"PR:O60187"}


id: PR:O13923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crn1 gene.","definition_xrefs":["UniProtKB:O13923","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin-like protein crn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.02","synonyms":[{"name":"Spom972h-crn1","type":"exact"}],"termid":"PR:O13923"}


id: FYPO:0004407
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to triplatin tetranitrate (also called BBR 3464). Cells stop growing (and may die) at a concentration of triplatin tetranitrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to triplatin tetranitrate","synonyms":[{"name":"hypersensitive to triplatin tetranitrate","type":"exact"},{"name":"sensitive to BBR 3464","type":"exact"},{"name":"sensitive to triplatin tetranitrate during mitotic cell cycle","type":"related"},{"name":"sensitive to triplatin tetranitrate during vegetative growth","type":"exact"}],"termid":"FYPO:0004407"}


id: GO:0033639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to water (obsolete GO:0033639)","termid":"GO:0033639"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_05219","SJAG_02163","SJAG_04954","SJAG_00554"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100333,74824,72310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[63655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[61699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0016095":null,"GO:0019348":null,"GO:0019408":null}}


id: MONDO:1012104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkin disease, non-human animal","termid":"MONDO:1011808"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hodgkin disease, dog","secondary_identifiers":["OMIA:000476-9615"],"termid":"MONDO:1012104","xrefs":{"Monarch":{"xref_id":"1012104"}}}


id: GO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which information about the density of cells in a population is received by direct cell-cell contact and is converted into a molecular signal, resulting in the cessation of cell growth or proliferation.","definition_xrefs":["GOC:dph","PMID:17376520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of cell density","termid":"GO:0060245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact inhibition","secondary_identifiers":["GO:0060248","Wikipedia:Contact_inhibition","GO:0060246"],"synonyms":[{"name":"detection of cell density by contact stimulus","type":"related"},{"name":"detection of cell density by contact stimulus involved in contact inhibition","type":"related"}],"termid":"GO:0060242"}


id: PBO:0057185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 340","termid":"PBO:0057185"}


id: PBO:0066698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 5 homolog A","termid":"PBO:0066698"}


id: MONDO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving sexual activity with a prepubescent child or children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedophilia","secondary_identifiers":["ICD9:302.2","DOID:13351","ICD10CM:F65.4","SCTID:84002002","MEDGEN:18340","MESH:D010378","NCIT:C94355","UMLS:C0030764"],"synonyms":[{"name":"Paedophilia","type":"exact"}],"termid":"MONDO:0001692","xrefs":{"Monarch":{"xref_id":"0001692"}}}


id: MONDO:0007867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 2","secondary_identifiers":["MESH:C537260","DOID:0080080","MEDGEN:75593","OMIM:149300","SCTID:66270006","UMLS:C0266000","ICD9:703.8"],"synonyms":[{"name":"Koilonychia with leukonychia","type":"related"},{"name":"Koilonychia, hereditary","type":"related"},{"name":"NDNC2","type":"related"},{"name":"congenital koilonychia","type":"related"},{"name":"familial koilonychia","type":"related"},{"name":"hereditary koilonychia","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 2","type":"related"},{"name":"nonsyndromic congenital nail disorder type 2","type":"exact"},{"name":"spoon nails","type":"related"}],"termid":"MONDO:0007867","xrefs":{"Monarch":{"xref_id":"0007867"}}}


id: MONDO:0013070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 7","secondary_identifiers":["OMIM:612997","MEDGEN:414478","UMLS:C2751811","MESH:C567832","GARD:18400","DOID:0070173"],"synonyms":[{"name":"Male infertility, nonsyndromic, autosomal recessive","type":"related"},{"name":"SPGF7","type":"related"},{"name":"spermatogenic failure 7","type":"exact"},{"name":"spermatogenic failure type 7","type":"exact"}],"termid":"MONDO:0013070","xrefs":{"Monarch":{"xref_id":"0013070"}}}


id: RO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"transitive form of directly_provides_input_for","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitively_provides_input_for","termid":"RO:0002414"}


id: PBO:0080111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urotensin 2B","termid":"PBO:0080111"}


id: GO:0006517
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"The removal of sugar residues from a glycosylated protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglycosylation","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"glycoprotein deglycosylation","type":"exact"}],"termid":"GO:0006517","terms_by_termid":{"GO:1904380":null}}


id: GO:1904071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic active zone. The presynaptic active zone is a specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["GOC:pr","GO_REF:0000079","PMID:10769383","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"presynaptic active zone assembly","synonyms":[{"name":"pre-synaptic active zone assembly","type":"exact"},{"name":"pre-synaptic active zone component assembly","type":"narrow"},{"name":"pre-synaptic active zone component formation","type":"narrow"},{"name":"pre-synaptic active zone formation","type":"exact"},{"name":"presynaptic active zone formation","type":"exact"}],"termid":"GO:1904071"}


id: PBO:0056775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 25","termid":"PBO:0056775"}


id: PBO:0051893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2b","termid":"PBO:0051893"}


id: PBO:0074681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63C","termid":"PBO:0074681"}


id: FYPO:0001953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of calcium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal calcium import","synonyms":[{"name":"abnormal calcium import during mitotic cell cycle","type":"related"},{"name":"abnormal calcium import during vegetative growth","type":"exact"},{"name":"abnormal calcium import into cell","type":"exact"},{"name":"abnormal calcium ion import","type":"exact"},{"name":"abnormal calcium ion import across plasma membrane","type":"exact"},{"name":"abnormal cellular calcium import","type":"exact"}],"termid":"FYPO:0001953"}


id: PBO:0113381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipid transport protein; peripheral membrane protein required for vesicle formation during autophagy, pexophagy and the CVT pathway; directed to autophagic membranes by Atg18p where it acts as a PAS-ER membrane tether during autophagosome formation; involved in Atg9p cycling between the PAS and mitochondria; binds the phospholipid PI(3)P via an APT1 domain; essential for cell cycle progression from G2/M to G1 under nitrogen starvation; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0113381"}


id: GO:1900849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pseurotin A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"pseurotin A biosynthetic process","termid":"GO:1900790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of pseurotin A biosynthetic process","synonyms":[{"name":"regulation of Pseurotin anabolism","type":"related"},{"name":"regulation of Pseurotin biosynthesis","type":"related"},{"name":"regulation of Pseurotin biosynthetic process","type":"related"},{"name":"regulation of Pseurotin formation","type":"related"},{"name":"regulation of Pseurotin synthesis","type":"related"},{"name":"regulation of pseurotin A anabolism","type":"exact"},{"name":"regulation of pseurotin A biosynthesis","type":"exact"},{"name":"regulation of pseurotin A formation","type":"exact"},{"name":"regulation of pseurotin A synthesis","type":"exact"}],"termid":"GO:1900849"}


id: PBO:0079462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23B pseudogene 2","termid":"PBO:0079462"}


id: PBO:0042656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 5","termid":"PBO:0042656"}


id: MONDO:0004212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing squamous cell carcinoma that arises from the vulva. It is self-limited and is characterized by the presence of a central crater that contains squamous cells. The proliferating squamous cells infiltrate the dermis below and produce keratin masses that are pushed towards the surface of the tumor.","definition_xrefs":["NCIT:C40288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar keratoacanthoma-like carcinoma","secondary_identifiers":["DOID:7408"],"synonyms":[{"name":"vulvar squamous cell carcinoma, keratoacanthoma type","type":"exact"}],"termid":"MONDO:0004212","xrefs":{"Monarch":{"xref_id":"0004212"}}}


id: GO:0098536
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, electron dense, cytoplasmic structure that is involved in de novo assembly of centrioles.","definition_xrefs":["PMID:24075808","GOC:cilia","PMID:25047614","GOC:dos","PMID:5661997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"deuterosome","termid":"GO:0098536"}


id: MONDO:0017668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-short stature-hypertelorism syndrome is a rare genetic syndromic intellectual disability affecting males characterized by short stature, mild to moderate intellectual deficits, craniofacial dysmorphism (prominent broad 'square' forehead, hypertelorism, depressed nasal bridge, broad nasal tip and anteverted nares) and early hypotonia present only until the age of 2. There have been no further descriptions in the literature since the original article in 1991 and it has been suggested that this condition represents an example of FG syndrome.","definition_xrefs":["Orphanet:3074"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-short stature-hypertelorism syndrome","secondary_identifiers":["MEDGEN:1665709","UMLS:C4749650","GARD:3514"],"synonyms":[{"name":"Stoll-GC)raudel-Chauvin syndrome","type":"exact"},{"name":"Stoll-Géraudel-Chauvin syndrome","type":"related"},{"name":"intellectual deficit - short stature - hypertelorism","type":"related"},{"name":"intellectual disability short stature hypertelorism","type":"related"},{"name":"mental retardation short stature hypertelorism","type":"related"}],"termid":"MONDO:0017668","xrefs":{"Monarch":{"xref_id":"0017668"}}}


id: MONDO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal Xq duplications refer to chromosomal disorders resulting from involvement of the long arm of the X chromosome (Xq). Clinical manifestations vary widely depending on the gender of the patient and on the gene content of the duplicated segment. The prevalence of Xq duplications remains unknown.","definition_xrefs":["Orphanet:1762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome X","termid":"MONDO:0017010"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Lubs type","secondary_identifiers":["NCIT:C126747","MEDGEN:337496","ICD9:758.89","SCTID:702816000","UMLS:C1846058","DECIPHER:45","MESH:C537723","OMIM:300260","NANDO:2200984","GARD:9781","DOID:0060799"],"synonyms":[{"name":"Lubs X-linked intellectual disability syndrome","type":"exact"},{"name":"Lubs X-linked intellectual disability syndrome (formerly)","type":"related"},{"name":"Lubs X-linked mental retardation syndrome","type":"exact"},{"name":"Lubs X-linked mental retardation syndrome (formerly)","type":"related"},{"name":"MECP2 Duplication syndrome","type":"related"},{"name":"MECP2 duplication syndrome","type":"exact"},{"name":"MRXSL","type":"exact"},{"name":"X-linked intellectual disability-hypotonia-recurrent infections syndrome","type":"exact"},{"name":"XLMR syndrome, Lubs type","type":"related"},{"name":"Xq28 (MECP2) duplication","type":"exact"},{"name":"distal duplication Xq","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Lubs type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, Lubs type (formerly)","type":"related"},{"name":"intellectual disability, X-linked, syndromic, Lubs type","type":"exact"},{"name":"intellectual disability, X-linked, with recurrent respiratory infections","type":"exact"},{"name":"mental retardation, X-linked, Lubs type (formerly)","type":"related"},{"name":"mental retardation, X-linked, syndromic, Lubs type","type":"exact"},{"name":"mental retardation, X-linked, with recurrent respiratory infections","type":"exact"},{"name":"syndromic X-linked intellectual disability Lubs type","type":"exact"},{"name":"telomeric duplication Xq","type":"exact"},{"name":"trisomy Xq28","type":"related"}],"termid":"MONDO:0010283","xrefs":{"Monarch":{"xref_id":"0010283"}}}


id: GO:0031251
data:
  {"annotated_genes":["SJAG_01910","SJAG_02808","SJAG_00966"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70708,77940,79302],"is_not":false,"summary":null,"term":"GO:0031251"}]},"cv_name":"cellular_component","definition":"A complex that possesses poly(A)-specific ribonuclease activity; catalyzes the message-specific shortening of mRNA poly(A) tails. Contains at least two subunits, known as Pan2p and Pan3p in Saccharomyces.","definition_xrefs":["PMID:9774670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00966":null,"SJAG_01910":null,"SJAG_02808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PAN complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"poly(A) nuclease complex","type":"exact"}],"termid":"GO:0031251","terms_by_termid":{"GO:0031251":null}}


id: PBO:0057835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3151","termid":"PBO:0057835"}


id: GO:0031517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 660nm. The response may involve a change in conformation.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light photoreceptor activity","termid":"GO:0009883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"red light photoreceptor activity","termid":"GO:0031517"}


id: GO:1904382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of one or more alpha 1,2-linked mannose residues from a mannosylated protein that occurs as part of glycoprotein ER-associated glycoprotein degradation (gpERAD).","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:24519966","GO_REF:0000060","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglycosylation involved in glycoprotein catabolic process","termid":"GO:0035977"},{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"},{"relation_name":"part_of","term_name":"ubiquitin-dependent glycoprotein ERAD pathway","termid":"GO:0097466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mannose trimming involved in glycoprotein ERAD pathway","synonyms":[{"name":"glycoprotein mannose trimming involved in ER-associated glycoprotein degradation","type":"related"},{"name":"glycoprotein mannose trimming involved in glycoprotein ERAD","type":"related"},{"name":"glycoprotein mannose trimming involved in glycoprotein ERAD pathway","type":"related"},{"name":"glycoprotein mannose trimming involved in gpERAD","type":"related"},{"name":"mannose trimming involved in misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"},{"name":"protein alpha-1,2-demannosylation involved in ER-associated glycoprotein degradation","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in glycoprotein ERAD","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in glycoprotein ERAD pathway","type":"exact"},{"name":"protein alpha-1,2-demannosylation involved in gpERAD","type":"exact"}],"termid":"GO:1904382"}


id: GO:1901699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen compound","synonyms":[{"name":"cellular response to nitrogen molecular entity","type":"exact"}],"termid":"GO:1901699"}


id: PBO:0063897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class U","termid":"PBO:0063897"}


id: PBO:0040165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylserotonin O-methyltransferase","termid":"PBO:0040165"}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["GOC:jl","MetaCyc:PWY-5724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"atrazine metabolic process","termid":"GO:0018873"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:atr"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: PBO:0061064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium/potassium transporting ATPase interacting 3","termid":"PBO:0061064"}


id: GO:0036133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thromboxane B2 + NAD+ = 11-dehydro-thromboxane B2 + NADH + H+.","definition_xrefs":["PMID:3461463","PMID:3823488","PMID:8200461","GOC:mw","KEGG_REACTION:R05060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"11-hydroxythromboxane B2 dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161732","RHEA:52312"],"synonyms":[{"name":"NAD dependent 11-hydroxythromboxane B2 dehydrogenase activity","type":"exact"}],"termid":"GO:0036133"}


id: PBO:0005414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32 (predicted)","termid":"PBO:0005414"}


id: GO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous excitatory synaptic inputs in a neural circuit.","definition_xrefs":["GOC:go_curators","ISBN:0195088433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic synaptic transmission","termid":"GO:0060024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"rhythmic excitation","termid":"GO:0043179"}


id: GO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. An enzyme complex that catalyzes the reduction of trimethylamine N-oxide to trimethylamine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylamine-N-oxide reductase complex (obsolete GO:0009322)","termid":"GO:0009322"}


id: FYPO:0001602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of substance in vacuole","synonyms":[{"name":"decreased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"decreased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"decreased vacuolar level of substance","type":"exact"},{"name":"reduced level of substance in vacuole","type":"exact"}],"termid":"FYPO:0001602"}


id: PBO:0080245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 8 pseudogene","termid":"PBO:0080245"}


id: PBO:0077361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 101","termid":"PBO:0077361"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30003614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: MONDO:0018689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive plasma cell neoplasm characterized by the presence of neoplastic plasma cells in the peripheral blood. It is characterized by the presence of a circulating clonal plasma cell count that exceeds 2x10^9/L or is 20% of the leukocyte differential count.","definition_xrefs":["NCIT:C3180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"plasma cell leukemia","secondary_identifiers":["GARD:9373","icd11.foundation:2048216430","ICD9:203.10","MESH:D007952","UMLS:C0023484","ICD9:203.1","ICDO:9733/3","Orphanet:454714","SCTID:95210003","EFO:0006475","DOID:9513","MEDGEN:9733"],"synonyms":[{"name":"PCL","type":"exact"},{"name":"leukaemia plasmacytic","type":"exact"},{"name":"leukemia plasmacytic","type":"exact"},{"name":"leukemia, plasma cell","type":"related"},{"name":"plasma cell leukemia","type":"exact"},{"name":"plasmacytic leukaemia","type":"exact"},{"name":"plasmacytic leukemia","type":"exact"}],"termid":"MONDO:0018689","xrefs":{"Monarch":{"xref_id":"0018689"}}}


id: GO:0018607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-indanone + NADPH + 1/2 O2 = NADP+ + 3,4-dihydrocoumarin.","definition_xrefs":["UM-BBD_reactionID:r0417"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-indanone monooxygenase activity (obsolete GO:0018607)","termid":"GO:0018607"}


id: GO:0036446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a myofibroblast cell.","definition_xrefs":["GOC:nhn","CL:0000186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast differentiation","synonyms":[{"name":"myofibroblast cell differentiation","type":"exact"}],"termid":"GO:0036446"}


id: GO:0036368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes required for a cone photoreceptor to recover, following light activation, so that it can respond to a subsequent light stimulus. Cone recovery requires the shutoff of active participants in the phototransduction cascade, including the visual pigment and downstream signal transducers.","definition_xrefs":["GOC:gap","PMID:22802362","PMID:16039565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cone photoresponse recovery","synonyms":[{"name":"cone phototransduction termination","type":"related"},{"name":"cone response recovery","type":"exact"}],"termid":"GO:0036368"}


id: PBO:0027555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiosis_II","termid":"PBO:0027555"}


id: PBO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 25","termid":"PBO:0072094"}


id: GO:0021916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Short range signaling between cells of the paraxial mesoderm and motor neuron precursors in the spinal cord that specifies the fate of the motor column neuron precursors along the anterior-posterior axis.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:dgh","GOC:jid","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"},{"relation_name":"part_of","term_name":"somatic motor neuron fate commitment","termid":"GO:0021917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive cell-cell signaling between paraxial mesoderm and motor neuron precursors","synonyms":[{"name":"inductive cell-cell signalling between paraxial mesoderm and motor neuron precursors","type":"exact"}],"termid":"GO:0021916"}


id: PR:Q9Y7L0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-trafficking protein SEC22b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.08c","synonyms":[{"name":"Spom972h-SEC22B","type":"exact"}],"termid":"PR:Q9Y7L0"}


id: PBO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oxidative_stress","termid":"PBO:0031495"}


id: FYPO:0006851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more meiotic cell cycle phases is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase","termid":"FYPO:0002738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of meiotic cell cycle phase","synonyms":[{"name":"reduced duration of meiotic cell cycle phase","type":"exact"}],"termid":"FYPO:0006851"}


id: PBO:0034244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-obsolete_has_indirect_output_(obsolete_RO:0002403)","termid":"PBO:0034244"}


id: GO:0090227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of red or far-red light signaling pathway","synonyms":[{"name":"regulation of phytochrome signaling pathway","type":"exact"},{"name":"regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090227"}


id: MONDO:0009233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibulo-ulnar hypoplasia-renal anomalies syndrome is characterized by fibuloulnar dysostosis with renal anomalies. It has been described in two sibs born to nonconsanguinous parents. The syndrome is lethal at birth (respiratory failure). Clinical manifestations include ear and facial anomalies (including micrognathia), symmetrical shortness of long bones, fibular agenesis and hypoplastic ulna, oligosyndactyly, congenital heart defects, and cystic or hypoplastic kidney. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fibulo-ulnar hypoplasia-renal anomalies syndrome","secondary_identifiers":["GARD:320","MESH:C537226","MEDGEN:383972","OMIM:228940","SCTID:716094008","UMLS:C1856727"],"synonyms":[{"name":"FIBULOULNAR aplasia or hypoplasia with renal abnormalities","type":"related"},{"name":"Fibulo ulnar hypoplasia renal anomalies","type":"related"},{"name":"Saito Kuba Tsuruta syndrome","type":"related"},{"name":"Saito-Kuba-Tsuruta syndrome","type":"exact"}],"termid":"MONDO:0009233","xrefs":{"Monarch":{"xref_id":"0009233"}}}


id: GO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11E)-delta11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA 11-(E)-desaturase activity","secondary_identifiers":["MetaCyc:1.14.99.31-RXN","EC:1.14.19.24"],"synonyms":[{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"myristoyl-CoA 11-(E) desaturase activity","type":"narrow"}],"termid":"GO:0050600"}


id: PBO:0078443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining 1","termid":"PBO:0078443"}


id: MONDO:0013341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methylmalonic aciduria due to transcobalamin receptor defect is a rare metabolite absorption and transport disorder characterized by a moderate increase of methylmalonic acid (MMA) in the blood and urine due to decreased cellular uptake of cobalamin resulting from decreased transcobalamin receptor function. Patients are usually asymptomatic however, screening reveals increased C3-acylcarnitine and MMA in plasma. Serum homocysteine levels may vary from normal to moderately elevated and retinal vascular occlusive disease, resulting in severe visual loss, has been reported.","definition_xrefs":["Orphanet:280183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"methylmalonic acidemia due to transcobalamin receptor defect","secondary_identifiers":["GARD:16481","DOID:0060741","MEDGEN:1670056","OMIM:613646","UMLS:C4749905"],"synonyms":[{"name":"CD320 methylmalonic acidemia","type":"exact"},{"name":"methylmalonic acidemia caused by mutation in CD320","type":"exact"},{"name":"methylmalonic acidemia, TCb1R type","type":"exact"},{"name":"methylmalonic acidemia, TCbIR type","type":"exact"},{"name":"methylmalonic acidemia, Tcblr type","type":"related"},{"name":"methylmalonic aciduria due to transcobalamin receptor defect","type":"exact"},{"name":"methylmalonic aciduria, transient, due to transcobalamin receptor defect","type":"related"}],"termid":"MONDO:0013341","xrefs":{"Monarch":{"xref_id":"0013341"}}}


id: MONDO:0001360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular hypotension","termid":"MONDO:0004390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blind hypotensive eye","secondary_identifiers":["SCTID:23360000","ICD9:360.41","MEDGEN:509659","UMLS:C0154788","DOID:11766"],"termid":"MONDO:0001360","xrefs":{"Monarch":{"xref_id":"0001360"}}}


id: MONDO:0002052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of one or more lymph nodes. It is usually caused by an infectious process.","definition_xrefs":["NCIT:C26821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymph node disorder","termid":"MONDO:0004928"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphadenitis","secondary_identifiers":["SCTID:41174002","ICD9:683","MESH:D008199","DOID:1602","HP:0002840","icd11.foundation:1483611415","ICD9:289.1","MEDGEN:7410","UMLS:C0024205"],"synonyms":[{"name":"Inflammation of lymph node","type":"exact"},{"name":"acute adenitis","type":"narrow"},{"name":"acute lymphadenitis","type":"narrow"},{"name":"adenitis","type":"exact"},{"name":"chronic adenitis","type":"narrow"},{"name":"chronic lymphadenitis","type":"narrow"},{"name":"inflammation of lymph node","type":"exact"},{"name":"lymph gland infection","type":"related"},{"name":"lymph node inflammation","type":"exact"},{"name":"lymph nodeitis","type":"exact"},{"name":"lymphadenitis","type":"exact"},{"name":"lymphadenitis (disease)","type":"exact"}],"termid":"MONDO:0002052","xrefs":{"Monarch":{"xref_id":"0002052"}}}


id: GO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of histamine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"},{"relation_name":"is_a","term_name":"regulation of histamine uptake","termid":"GO:0051616"},{"relation_name":"negatively_regulates","term_name":"histamine uptake","termid":"GO:0051615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of histamine uptake","synonyms":[{"name":"down regulation of histamine uptake","type":"exact"},{"name":"down-regulation of histamine uptake","type":"exact"},{"name":"downregulation of histamine uptake","type":"exact"},{"name":"negative regulation of histamine import","type":"exact"}],"termid":"GO:0051617"}


id: PBO:0052939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 23-1","termid":"PBO:0052939"}


id: GO:1902301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galactaric acid anion (galactarate) from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldarate transmembrane transporter activity","termid":"GO:0042876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"galactarate transmembrane transporter activity","secondary_identifiers":["GO:0042877"],"synonyms":[{"name":"D-galactarate transmembrane transporter activity","type":"related"},{"name":"galactaric acid anion transmembrane transporter activity","type":"exact"}],"termid":"GO:1902301"}


id: GO:1905103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the lysosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:TermGenie","PMID:26134396","GOC:PARL","GO_REF:0000064","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of lysosomal membrane (obsolete GO:1905103)","synonyms":[{"name":"integral component of lysosome membrane","type":"exact"},{"name":"integral to lysosomal membrane","type":"narrow"}],"termid":"GO:1905103"}


id: PBO:0018228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBMPFD","termid":"PBO:0018228"}


id: PBO:0012860
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsk1 Interacting Molecule","termid":"PBO:0012860"}


id: PBO:0058557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6499","termid":"PBO:0058557"}


id: MOD:01284
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:10825247","PubMed:9254591","PubMed:15541752","Unimod:206#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"acrolein addition +56 - site C","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01284"}


id: PBO:0077146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triokinase and FMN cyclase","termid":"PBO:0077146"}


id: PBO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase Qtrt1","termid":"PBO:0016045"}


id: GO:0099150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic specialization assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"}


id: GO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dopamine(out) + Na+(out) + Cl-(out)= dopamine(in) + Na+(in) + Cl-(in).","definition_xrefs":["PMID:21752877","PMID:22519513","TC:2.A.22.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"dopamine:sodium symporter activity","secondary_identifiers":["GO:0005329"],"synonyms":[{"name":"dopamine transmembrane transporter activity","type":"exact"},{"name":"dopamine:sodium:chloride symporter activity","type":"exact"},{"name":"sodium/dopamine symporter activity","type":"exact"}],"termid":"GO:0005330"}


id: MONDO:0021178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.","definition_xrefs":["NCIT:C3671"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"injury","secondary_identifiers":["EFO:0000546","MESH:D014947"],"synonyms":[{"name":"injury","type":"exact"},{"name":"trauma","type":"exact"},{"name":"traumatic injury","type":"exact"},{"name":"wound","type":"exact"}],"termid":"MONDO:0021178","xrefs":{"Monarch":{"xref_id":"0021178"}}}


id: PBO:0109021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gfo/Idh/MocA-like oxidoreductase domain containing 1","termid":"PBO:0109021"}


id: GO:2000711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"positive regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"positive regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000711"}


id: PBO:0016116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+/calmodulin-dependent (CaMMK)-like protein kinase Ssp1","termid":"PBO:0016116"}


id: PBO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-thialysine","termid":"PBO:0030142"}


id: GO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["PMID:11741859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"initiation of acetate catabolic process","termid":"GO:0043077"},{"relation_name":"part_of","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"initiation of acetate catabolic process by acetate","synonyms":[{"name":"initiation of acetate breakdown by acetate","type":"exact"},{"name":"initiation of acetate degradation by acetate","type":"exact"}],"termid":"GO:0045146"}


id: MONDO:0010818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CRB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 12","secondary_identifiers":["OMIM:600105","DOID:0110358","GARD:10376","MESH:C563999","MEDGEN:374019","ICD10CM:H35.5","UMLS:C1838647"],"synonyms":[{"name":"CRB1 retinitis pigmentosa","type":"exact"},{"name":"RP 12","type":"related"},{"name":"RP with or without Pprpe","type":"related"},{"name":"RP with or without preserved Paraarteriole retinal pigment epithelium","type":"related"},{"name":"RP12","type":"exact"},{"name":"retinitis pigmentosa 12","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CRB1","type":"exact"},{"name":"retinitis pigmentosa type 12","type":"exact"},{"name":"retinitis pigmentosa with or without Paraarteriolar preservation of retinal pigment epithelium","type":"related"},{"name":"retinitis pigmentosa-12","type":"exact"}],"termid":"MONDO:0010818","xrefs":{"Monarch":{"xref_id":"0010818"}}}


id: MONDO:0012139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macular dystrophy, retinal","termid":"MONDO:0031166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy, retinal, 3","secondary_identifiers":["MEDGEN:854716","DOID:0070440","UMLS:C3888009","OMIM:608850"],"synonyms":[{"name":"MCDR3","type":"related"},{"name":"Mcdr3","type":"related"},{"name":"macular dystrophy, retinal, 3","type":"exact"},{"name":"macular dystrophy, retinal, type 3","type":"exact"}],"termid":"MONDO:0012139","xrefs":{"Monarch":{"xref_id":"0012139"}}}


id: MONDO:0014573
data:
  {"annotated_genes":["SJAG_02349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85796],"is_not":false,"summary":null,"term":"MONDO:0014573"}]},"cv_name":"mondo","definition":"Any Cole-Carpenter syndrome in which the cause of the disease is a mutation in the SEC24D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cole-Carpenter syndrome","termid":"MONDO:0016085"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cole-Carpenter syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16077","MEDGEN:905199","OMIM:616294","UMLS:C4225382"],"synonyms":[{"name":"CLCRP2","type":"related"},{"name":"COLE-CARPENTER syndrome 2","type":"related"},{"name":"Cole-Carpenter syndrome 2","type":"exact"},{"name":"Cole-Carpenter syndrome caused by mutation in SEC24D","type":"exact"},{"name":"Cole-Carpenter syndrome type 2","type":"exact"},{"name":"SEC24D Cole-Carpenter syndrome","type":"exact"}],"termid":"MONDO:0014573","terms_by_termid":{"MONDO:0014573":null},"xrefs":{"Monarch":{"xref_id":"0014573"}}}


id: GO:0004153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydropterin + H2O = 7,8-dihydrolumazine + NH3.","definition_xrefs":["PMID:38786926","GOC:jl","PMID:19567870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dihydropterin deaminase activity","secondary_identifiers":["MetaCyc:RXN-15261"],"termid":"GO:0004153"}


id: PBO:0036232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs2 (predicted)","termid":"PBO:0036232"}


id: MONDO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 10q is a chromosomal anomaly involving terminal deletion of the long arm of chromosome 10 and is characterized by facial dysmorphism, pre- and postnatal growth retardation, cardiac and genital anomalies, and developmental delay.","definition_xrefs":["Orphanet:96148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 10","termid":"MONDO:0016909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 10q deletion syndrome","secondary_identifiers":["MEDGEN:436306","MESH:C567182","OMIM:609625","UMLS:C2674937","SCTID:718687003","GARD:3711","DOID:0060390"],"synonyms":[{"name":"10q deletion","type":"related"},{"name":"10q monosomy","type":"related"},{"name":"chromosome 10q deletion","type":"related"},{"name":"chromosome 10q26 deletion syndrome","type":"exact"},{"name":"deletion 10q","type":"related"},{"name":"distal deletion 10q","type":"exact"},{"name":"distal monosomy 10q","type":"exact"},{"name":"distal monosomy type 10q","type":"exact"},{"name":"monosomy 10q","type":"related"},{"name":"monosomy 10qter","type":"exact"},{"name":"partial monosomy 10q","type":"related"},{"name":"telomeric deletion 10q","type":"exact"},{"name":"terminal chromosome 10Q26 deletion syndrome","type":"related"},{"name":"terminal chromosome 10q26 deletion syndrome","type":"exact"}],"termid":"MONDO:0012315","xrefs":{"Monarch":{"xref_id":"0012315"}}}


id: PBO:0114478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (adenine) methyltransferase activity Bmt2/human SAMTOR (S-adenosylmethionine sensor for the MTOR) ortholog","termid":"PBO:0114478"}


id: GO:2000742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior head development","termid":"GO:2000742"}


id: PBO:0055672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase B, lysosomal acid type","termid":"PBO:0055672"}


id: GO:0061640
data:
  {"annotated_genes":["SJAG_03025","SJAG_00228","SJAG_05290","SJAG_04621","SJAG_01889","SJAG_02807","SJAG_02232","SJAG_04551","SJAG_03342","SJAG_02916","SJAG_01732","SJAG_04498","SJAG_04412","SJAG_01894","SJAG_02380","SJAG_00663","SJAG_02592","SJAG_05285","SJAG_01456","SJAG_03379","SJAG_03564","SJAG_04470","SJAG_04375","SJAG_04077","SJAG_01453","SJAG_00938","SJAG_04468","SJAG_01863","SJAG_03887","SJAG_02657","SJAG_03915","SJAG_03088","SJAG_00807","SJAG_02831","SJAG_04887","SJAG_02431","SJAG_01769","SJAG_02864","SJAG_04930","SJAG_01215","SJAG_00514","SJAG_00442","SJAG_00256","SJAG_04001","SJAG_00279","SJAG_03123","SJAG_03048","SJAG_00082","SJAG_02392","SJAG_01188","SJAG_03581","SJAG_04703","SJAG_01665","SJAG_01386","SJAG_04666","SJAG_03703","SJAG_01464","SJAG_01277","SJAG_00268","SJAG_02222","SJAG_03264","SJAG_01143","SJAG_03309","SJAG_02215","SJAG_03631","SJAG_01114","SJAG_01943","SJAG_03692","SJAG_03374","SJAG_04776","SJAG_02700","SJAG_04781","SJAG_02838","SJAG_04943","SJAG_01787","SJAG_03704","SJAG_04982","SJAG_03688","SJAG_00700","SJAG_03596","SJAG_05179","SJAG_00845","SJAG_01837","SJAG_04358","SJAG_03376","SJAG_04690","SJAG_03045","SJAG_04597","SJAG_03936","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75030,75273,76249],"is_not":false,"summary":null,"term":"GO:0061640"},{"annotations":[111111],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000915"},{"annotations":[108446,89668,98613,98355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[105470],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044837"},{"annotations":[100089,91633],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061796"},{"annotations":[75289,76703,112611,118761,98248,75940,112176,97977,88600,95622,102738,92882,119816,72899,102881,92932,98052,118177,99225],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903475"},{"annotations":[77783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[95623,97978,88601,98358,101251,112612,118178,101023,102739,99226],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[119273,98225,101282,103575,104237,80224,100440,98616,106523,113074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000281"},{"annotations":[109169,88613,96655,119586],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902408"},{"annotations":[106446,99614,102960,80778,108929,104983,113381],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140278"},{"annotations":[102683],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[104014],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[102462,107412,99993,93184],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902413"},{"annotations":[102688],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[90339,94748],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[94917,113669,110834,94749,87876],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[91108,111076,119587,104019],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[78274,106703,107364,105503,113670,90209,115772,92759,118190,94144],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[87877,92760,94752],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[114687,106430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031671"},{"annotations":[118939,111113,92667],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904498"},{"annotations":[119900,94150],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[117818,109526,92184,101263,90155,107457,118991,77401,103808],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902412"},{"annotations":[88193,111684,101709],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[116120],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cytokinesis that involves the function of a set of proteins that are part of the microfilament or microtubule 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id: GO:0035278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference pathway in which microRNAs (miRNAs) block the translation of target mRNAs into proteins. Once incorporated into a RNA-induced silencing complex (RISC), a miRNA will typically mediate repression of translation if the miRNA imperfectly base-pairs with the 3' untranslated regions of target mRNAs.","definition_xrefs":["PMID:14744438","PMID:15196554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"is_a","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"miRNA-mediated gene silencing by inhibition of translation","synonyms":[{"name":"down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"miRNA mediated inhibition of translation","type":"exact"},{"name":"miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035278"}


id: MOD:01197
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamine residue to N-heptosyl-L-glutamine.","definition_xrefs":["Unimod:490#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-heptosyl-L-glutamine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01197"}


id: PR:Q9UTP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11H11.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smr domain-containing protein C11H11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.03c","synonyms":[{"name":"Spom972h-SPAC11H11.03c","type":"exact"}],"termid":"PR:Q9UTP4"}


id: FYPO:0004389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid catabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid catabolism RNAs are transcribed from genes whose products are involved in amino acid catabolism.","definition_xrefs":["PMID:23695302","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of amino acid metabolism gene mRNA during vegetative growth","termid":"FYPO:0002743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of amino acid catabolism gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid catabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid catabolism gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid catabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid catabolism gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004389"}


id: PBO:0059585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioadenosine phosphorylase pseudogene 2","termid":"PBO:0059585"}


id: GO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation (obsolete GO:0031064)","synonyms":[{"name":"down regulation of histone deacetylation","type":"exact"},{"name":"down-regulation of histone deacetylation","type":"exact"},{"name":"downregulation of histone deacetylation","type":"exact"},{"name":"inhibition of histone deacetylation","type":"narrow"}],"termid":"GO:0031064"}


id: PR:000044698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht1/Me(K9)","termid":"PR:000027578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044698"}


id: PBO:0055379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2809","termid":"PBO:0055379"}


id: PBO:0058882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10398","termid":"PBO:0058882"}


id: FYPO:0004794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine or threonine residues N-terminal to proline residues (i.e. in Ser/Thr-Pro sequences) occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein phosphorylation at Ser/Thr-Pro site during vegetative growth (obsolete FYPO:0004794)","synonyms":[{"name":"decreased protein phosphorylation at S/TP site during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation at Ser/Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation at serine/threonine-proline site during vegetative growth","type":"exact"},{"name":"decreased protein serine or threonine phosphorylation at Ser/Thr-Pro site during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation at Ser/Thr-Pro site during vegetative growth","type":"exact"}],"termid":"FYPO:0004794"}


id: PBO:0050654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 4, pseudogene","termid":"PBO:0050654"}


id: PBO:0034516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long,_thick_stable_microtubule_bundle","termid":"PBO:0034516"}


id: PBO:0029414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_branched,_elongated_germ_tube","termid":"PBO:0029414"}


id: PBO:0078980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 6-1","termid":"PBO:0078980"}


id: MONDO:0016405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sterol metabolism disorder with epilepsy (obsolete MONDO:0016405)","secondary_identifiers":["Orphanet:225710"],"termid":"MONDO:0016405","xrefs":{"Monarch":{"xref_id":"0016405"}}}


id: GO:1905789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["PMID:8692859","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:1905787"},{"relation_name":"positively_regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"activation of detection of mechanical stimulus involved in sensory perception of touch","type":"narrow"},{"name":"activation of perception of touch, detection of mechanical stimulus","type":"narrow"},{"name":"activation of perception of touch, sensory detection of mechanical stimulus","type":"narrow"},{"name":"activation of perception of touch, sensory transduction of mechanical stimulus","type":"narrow"},{"name":"activation of sensory detection of mechanical stimulus during perception of touch","type":"narrow"},{"name":"activation of sensory transduction of mechanical stimulus during perception of touch","type":"narrow"},{"name":"activation of tactition, sensory detection of mechanical stimulus","type":"narrow"},{"name":"positive regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"positive regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"positive regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"positive regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"positive regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"positive regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"up regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"up regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"up regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"up regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"up regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"up regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"up regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"up-regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"up-regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"up-regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"up-regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"upregulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"upregulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"upregulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"upregulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"upregulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"upregulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"upregulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905789"}


id: PBO:0065681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase domain containing 1","termid":"PBO:0065681"}


