# terms

id: MONDO:0044350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hyperparathyroidism","termid":"MONDO:0016365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, primary, caused by water clear cell hyperplasia","secondary_identifiers":["UMLS:C1838501","GARD:18254","MESH:C563982","MEDGEN:325036","OMIM:600166"],"synonyms":[{"name":"hyperparathyroidism, primary, caused by water clear cell hyperplasia","type":"exact"}],"termid":"MONDO:0044350","xrefs":{"Monarch":{"xref_id":"0044350"}}}


id: PBO:0053816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1077","termid":"PBO:0053816"}


id: PBO:0028138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_large_ribosomal_subunit_level","termid":"PBO:0028138"}


id: MONDO:1012078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fibrodysplasia ossificans, non-human animal","termid":"MONDO:1011789"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrodysplasia ossificans, dog","secondary_identifiers":["OMIA:000388-9615"],"termid":"MONDO:1012078","xrefs":{"Monarch":{"xref_id":"1012078"}}}


id: GO:0099505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the potential difference across a presynaptic membrane.","definition_xrefs":["GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic membrane potential","synonyms":[{"name":"regulation of pre-synaptic membrane potential","type":"exact"}],"termid":"GO:0099505"}


id: PBO:0071102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 104","termid":"PBO:0071102"}


id: PR:Q09853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein MON2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10663:SF5","PRO:DNx","OMA:SCHPO01811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein MON2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.13c","secondary_identifiers":["UniProtKB:Q09853"],"synonyms":[{"name":"Spom972h-MON2","type":"exact"}],"termid":"PR:Q09853"}


id: GO:0047459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-aminobutanoyl-CoA = crotonoyl-CoA + NH4.","definition_xrefs":["RHEA:10056","EC:4.3.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"3-aminobutyryl-CoA ammonia-lyase activity","secondary_identifiers":["KEGG_REACTION:R03030","MetaCyc:4.3.1.14-RXN"],"synonyms":[{"name":"L-3-aminobutyryl-CoA ammonia-lyase (crotonoyl-CoA-forming)","type":"related"},{"name":"L-3-aminobutyryl-CoA ammonia-lyase activity","type":"related"},{"name":"L-3-aminobutyryl-CoA deaminase activity","type":"related"}],"termid":"GO:0047459"}


id: PBO:0113144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is required for non-nitrogen-starvation (NNS)-induced autophagy, and is a subcomplex of the SEA, a coatomer-related complex that associates with the vacuole; Iml1p functions as a GAP for the Rag family GTPase Gtr1p (EGOC subunit) in SEACIT, resulting in the inhibition of TORC1 signaling in response to amino acid deprivation; role in the oxidative stress response","termid":"PBO:0113144"}


id: PBO:0062479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily K member 1 pseudogene","termid":"PBO:0062479"}


id: PBO:0041590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 4","termid":"PBO:0041590"}


id: MONDO:0018370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KLHL9-related early-onset distal myopathy is a rare, genetic distal myopathy characterized by slowly progressive distal limb muscle weakness and atrophy (beginning with anterior tibial muscle involvement followed by the intrinsic hand muscles) in association with reduced sensation in a stocking-glove distribution. Patients present with high stepping gait, ankle areflexia and contractures in the first to second decade of life, associated with marked ankle extensor muscle atrophy; later proximal muscle involvement is moderate and ambulation is preserved throughout the life.","definition_xrefs":["Orphanet:399081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336"],"is_obsolete":false,"name":"KLHL9-related early-onset distal myopathy","secondary_identifiers":["SCTID:763776004","UMLS:C4706574","MEDGEN:1647584","GARD:21655"],"termid":"MONDO:0018370","xrefs":{"Monarch":{"xref_id":"0018370"}}}


id: MONDO:0800310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"pregnancy loss, recurrent, 4","secondary_identifiers":["MEDGEN:481067","UMLS:C3279437"],"synonyms":[{"name":"RPRGL4","type":"exact"}],"termid":"MONDO:0800310","xrefs":{"Monarch":{"xref_id":"0800310"}}}


id: PBO:0072478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 7","termid":"PBO:0072478"}


id: RO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has potential to directly develop into y iff x directly develops into y or x is capable of directly developing into y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_potential_to_develop_into","termid":"RO:0002387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_potential_to_directly_develop_into","termid":"RO:0002388"}


id: PBO:0047366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXL19 antisense RNA 1","termid":"PBO:0047366"}


id: FYPO:0001236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cycloheximide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on cycloheximide","synonyms":[{"name":"normal cell population growth in presence of cycloheximide","type":"exact"},{"name":"normal cell population growth on cycloheximide","type":"exact"},{"name":"normal cellular response to cycloheximide","type":"related"},{"name":"normal vegetative cell population growth on cycloheximide","type":"exact"}],"termid":"FYPO:0001236"}


id: BFO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a core relation that holds between a part and its whole","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of","secondary_identifiers":["OBO_REL:part_of","BFO:0000050"],"synonyms":[{"name":"part of","type":"exact"}],"termid":"BFO:0000050"}


id: PBO:0082836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm","termid":"PBO:0082836"}


id: PBO:0017957
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease","termid":"PBO:0017957"}


id: PBO:0078868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM2 antisense RNA","termid":"PBO:0078868"}


id: MONDO:0800047
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86988],"is_not":false,"summary":null,"term":"MONDO:0800047"}]},"cv_name":"mondo","definition":"Any autosomal dominant macrothrombocytopenia in which the cause of the disease is a mutation in the TUBB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant macrothrombocytopenia","termid":"MONDO:0015372"},{"relation_name":"is_a","term_name":"macrothrombocytopenia, isolated","termid":"MONDO:0031447"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia, isolated, 1, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18271","DOID:0090102","MEDGEN:1811721","MESH:C567747","OMIM:613112","UMLS:C5676892"],"synonyms":[{"name":"MACTHC1","type":"exact"},{"name":"TUBB1 autosomal dominant macrothrombocytopenia","type":"exact"},{"name":"autosomal dominant macrothrombocytopenia TUBB1-related","type":"related"},{"name":"autosomal dominant macrothrombocytopenia caused by mutation in TUBB1","type":"exact"},{"name":"macrothrombocytopenia, autosomal dominant, TUBB1-related","type":"exact"}],"termid":"MONDO:0800047","terms_by_termid":{"MONDO:0800047":null},"xrefs":{"Monarch":{"xref_id":"0800047"}}}


id: PBO:0080000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 10 pseudogene 1","termid":"PBO:0080000"}


id: RO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"}


id: SO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding for more than one gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_primary_transcript","synonyms":[{"name":"polycistronic primary transcript","type":"exact"}],"termid":"SO:0000631"}


id: PBO:0004988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalase","termid":"PBO:0004988"}


id: PBO:0072474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 3","termid":"PBO:0072474"}


id: PBO:0017750
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta exists predominantly as a dimer of the heterotetramer (Pol3, Cdc1, Cdc27, and Cdm1)","termid":"PBO:0017750"}


id: PBO:0061359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 19","termid":"PBO:0061359"}


id: PBO:0054654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2059","termid":"PBO:0054654"}


id: GO:0098887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of neurotransmitter receptor from the postsynaptic endosome to the postsynaptic membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport, endosome to plasma membrane","termid":"GO:0099639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter receptor transport, endosome to postsynaptic membrane","synonyms":[{"name":"postsynaptic neurotransmitter receptor endosomal trafficking","type":"broad"}],"termid":"GO:0098887"}


id: PBO:0038537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12B","termid":"PBO:0038537"}


id: SO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The kink turn (K-turn) is an RNA structural motif that creates a sharp (~120 degree) bend between two continuous helices.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric_RNA_internal_loop","termid":"SO:0000021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"K_turn_RNA_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/K-turn"],"synonyms":[{"name":"K turn RNA motif","type":"exact"},{"name":"K-turn","type":"exact"},{"name":"kink turn","type":"exact"},{"name":"kink-turn motif","type":"exact"}],"termid":"SO:0000023"}


id: PBO:0063755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 20","termid":"PBO:0063755"}


id: MONDO:0022410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal ciliopathy","secondary_identifiers":["GARD:19987","UMLS:C5680651","MEDGEN:1843204","Orphanet:156165"],"termid":"MONDO:0022410","xrefs":{"Monarch":{"xref_id":"0022410"}}}


id: PBO:0076739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 1","termid":"PBO:0076739"}


id: PBO:0088183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc cluster transcription factor that regulates respiratory growth; binds to promoters of genes involved in respiration, gluconeogenesis, and the glyoxylate shunt; required for normal carbon source utilization and adaptation to pH, osmotic and ethanol stress especially during non-fermentative metabolism","termid":"PBO:0088183"}


id: PBO:0052552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLRC4-KLRK1 readthrough","termid":"PBO:0052552"}


id: PBO:0063282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 8","termid":"PBO:0063282"}


id: PBO:0072753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100A11 pseudogene 3","termid":"PBO:0072753"}


id: PBO:0112995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP/GDP nucleotidase, essential functional component of KEOPS complex, with Bud32p, Cgi121p, Pcc1p, and Gon7p; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; homolog of human OSGEP","termid":"PBO:0112995"}


id: GO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic ribosomal RNA (obsolete GO:0005567)","synonyms":[{"name":"cytosolic ribosomal RNA","type":"exact"}],"termid":"GO:0005567"}


id: MONDO:0017897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive (AR) mendelian susceptibility to mycobacterial diseases (MSMD) due to a complete deficiency describes a group of genetic variants of MSMD comprised of MSMD due to complete interferon gamma receptor 1 (IFN-gammaR1) deficiency, complete IFN-gammaR2 deficiency, complete interleukin-12 subunit beta (IL12B) deficiency, complete interleukin-12 receptor subunit beta-1 (IL-12RB1) deficiency and complete ISG15 deficiency.","definition_xrefs":["Orphanet:319535"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency (obsolete MONDO:0017897)","synonyms":[{"name":"autosomal recessive MSMD due to a complete deficiency","type":"exact"},{"name":"mendelian susceptibility to mycobacterial diseases due to a complete deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0017897","xrefs":{"Monarch":{"xref_id":"0017897"}}}


id: GO:0019373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which arachidonic acid is converted to other compounds including epoxyeicosatrienoic acids and dihydroxyeicosatrienoic acids.","definition_xrefs":["GOC:mah","PMID:17979511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate metabolic process","termid":"GO:0019369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"epoxygenase P450 pathway","secondary_identifiers":["Reactome:R-HSA-2142670"],"termid":"GO:0019373"}


id: PR:O59712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C3B8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.04c","synonyms":[{"name":"Spom972h-SPBC3B8.04c","type":"exact"}],"termid":"PR:O59712"}


id: PBO:0047073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member B","termid":"PBO:0047073"}


id: PR:Q9P7C6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DnaJ homolog subfamily C member 17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04348","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC10H11.02","secondary_identifiers":["UniProtKB:Q9P7C6"],"synonyms":[{"name":"Spom972h-DNAJC17","type":"exact"},{"name":"complexed with cdc5 protein 23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7C6"}


id: PATO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000139 relative orientation (obsolete PATO:0000139)","termid":"PATO:0000139"}


id: PBO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cka1","termid":"PBO:0001374"}


id: PBO:0035894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cyclin_B1-CDK1_complex_level","termid":"PBO:0035894"}


id: PBO:0062782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 4","termid":"PBO:0062782"}


id: PBO:0065603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 antisense RNA 1","termid":"PBO:0065603"}


id: GO:0062177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the radial spoke, a protein complex that links the outer microtubule doublet of the ciliary or flagellum axoneme with the sheath that surrounds the central pair of microtubules.","definition_xrefs":["PMID:24124175","PMID:21613541","PMID:8408197","PMID:21692193","PMID:27940518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"radial spoke assembly","termid":"GO:0062177"}


id: FYPO:0002379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","termid":"FYPO:0000313"},{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002379"}


id: PBO:0059378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 3","termid":"PBO:0059378"}


id: FYPO:0002043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal premeiotic DNA replication","synonyms":[{"name":"abnormal premeiotic DNA synthesis","type":"related"},{"name":"normal meiotic DNA replication","type":"related"},{"name":"normal meiotic DNA synthesis","type":"related"}],"termid":"FYPO:0002043"}


id: MONDO:0012667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the VCL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1W","secondary_identifiers":["MESH:C566954","UMLS:C1969639","DOID:0110446","GARD:15515","MEDGEN:370063","OMIM:611407"],"synonyms":[{"name":"CMD1W","type":"exact"},{"name":"VCL familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1W","type":"related"},{"name":"cardiomyopathy, dilated, type 1W","type":"exact"},{"name":"dilated cardiomyopathy type 1W","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in VCL","type":"exact"}],"termid":"MONDO:0012667","xrefs":{"Monarch":{"xref_id":"0012667"}}}


id: PBO:0087755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; transposon insertion mutant is salt sensitive and null mutant has growth defects; non-tagged protein is detected in purified mitochondria","termid":"PBO:0087755"}


id: GO:0140669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"regulation of oxytocin production","termid":"GO:0140667"},{"relation_name":"negatively_regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxytocin production","termid":"GO:0140669"}


id: PBO:0085252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein needed for Golgi-to-ER retrograde traffic; mediates Sey1p-independent homotypic ER fusion; forms Dsl1 tethering complex with Sec39p and Tip20p that forms a stable complex with ER SNAREs Sec20p, Ufe1p and Use1p and is functionally conserved from yeast to mammalian cells; component of the ER target site that interacts with coatomer; interacts with different subunits of COPI vesicle coat; interacts with Cin5p; homolog of fly and human ZW10 gene","termid":"PBO:0085252"}


id: PBO:0027755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_calcium_ion","termid":"PBO:0027755"}


id: GO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052232)","synonyms":[{"name":"positive aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052232"}


id: GO:1905400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:24187568","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"negatively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905400"}


id: PR:Q9USX1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A puromycin-sensitive aminopeptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.05","secondary_identifiers":["UniProtKB:Q9USX1"],"synonyms":[{"name":"Spom972h-NPEPPS","type":"exact"},{"name":"aminopeptidase I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USX1"}


id: GO:0090091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"positively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix disassembly","termid":"GO:0090091"}


id: GO:0044339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in osteoblast differentiation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:0044339)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:0044339"}


id: FYPO:0003988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has actin cortical patches in one or more abnormal locations.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized actin cortical patches","termid":"FYPO:0006771"},{"relation_name":"output_of","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"mislocalized actin cortical patches during vegetative growth","synonyms":[{"name":"abnormal actin cortical patch location during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch position during vegetative growth","type":"exact"},{"name":"mislocalised actin cortical patches during vegetative growth","type":"exact"},{"name":"mislocalized F-actin patches during vegetative growth","type":"exact"},{"name":"mislocalized actin cortical patches during mitotic cell cycle","type":"related"},{"name":"mislocalized actin patches during vegetative growth","type":"exact"}],"termid":"FYPO:0003988"}


id: GO:0042102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte proliferation","termid":"GO:0050671"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell proliferation","synonyms":[{"name":"activation of T cell proliferation","type":"narrow"},{"name":"positive regulation of T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of T cell proliferation","type":"narrow"},{"name":"up regulation of T cell proliferation","type":"exact"},{"name":"up-regulation of T cell proliferation","type":"exact"},{"name":"upregulation of T cell proliferation","type":"exact"}],"termid":"GO:0042102"}


id: PATO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a neoplastic cell by virtue of the bearer's exhibiting breakdown of cell-cell interaction maintaining tissue architecture, proliferative dysregulation and bizarre modification to nucleus size and shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic","termid":"PATO:0002092"}


id: PBO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation_during_vegetative_growth","termid":"PBO:0035934"}


id: MONDO:1012198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular squamous cell carcinoma, non-human animal","termid":"MONDO:1011812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, goat","secondary_identifiers":["OMIA:000735-9925"],"termid":"MONDO:1012198","xrefs":{"Monarch":{"xref_id":"1012198"}}}


id: GO:0033163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microneme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"microneme","termid":"GO:0020009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microneme membrane","termid":"GO:0033163"}


id: PBO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolatesynthase/methylenetetrahydrofolatedehydrogenase/methylenetetrahydrofolatecyclohydrolase/ formyltetrahydrofolatesynthetase (predicted)","termid":"PBO:0004512"}


id: MONDO:0009253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fryns syndrome (FS) is a multiple congenital anomaly syndrome characterized by dysmorphic facial features, congenital diaphragmatic hernia, pulmonary hypoplasia, and distal limb hypoplasia, in addition to variable expression of additional malformations.","definition_xrefs":["Orphanet:2059"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fryns syndrome","secondary_identifiers":["NORD:1167","OMIM:229850","UMLS:C0220730","MESH:C538070","GARD:3699","icd11.foundation:1327847749","ICD9:759.89","NCIT:C98932","MEDGEN:65088","SCTID:702432006"],"synonyms":[{"name":"FRNS","type":"related"},{"name":"Fryns syndrome","type":"exact"},{"name":"Moerman Van den Berghe Fryns syndrome","type":"related"},{"name":"diaphragmatic hernia, abnormal face, and distal limb anomalies","type":"related"},{"name":"diaphragmatic hernia-abnormal face-distal limb anomalies syndrome","type":"exact"}],"termid":"MONDO:0009253","xrefs":{"Monarch":{"xref_id":"0009253"}}}


id: PBO:0073629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 14","termid":"PBO:0073629"}


id: PBO:0077333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 70","termid":"PBO:0077333"}


id: PBO:0084840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL10 and YmL18) on two-dimensional SDS gels","termid":"PBO:0084840"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: FYPO:0004191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to hydroxyurea","synonyms":[{"name":"increased RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"increased RNA level during cellular response to HU","type":"exact"},{"name":"increased RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"increased transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004191"}


id: PBO:0054822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2235","termid":"PBO:0054822"}


id: PBO:0068504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 93, pseudogene","termid":"PBO:0068504"}


id: GO:0080182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:se"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 trimethylation (obsolete GO:0080182)","termid":"GO:0080182"}


id: MONDO:0019866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 5 is a rare chromosomal anomaly syndrome with a variable phenotype ranging from clinically normal to patients presenting intrauterine growth retardation, congenital heart anomalies (mainly ventricular septal defect), multiple dysmorphic features (e.g. hypertelorism, prominent nasal bridge) and other congenital anomalies (incl. eventration of diaphragm, agenesis of corpus callosum, cloverleaf skull, clinodactyly, anteriorly placed anus). Psychomotor development may be normal in spite of low growth parameters being associated.","definition_xrefs":["Orphanet:96060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 5","secondary_identifiers":["UMLS:C2931603","GARD:19301","MESH:C537762","MEDGEN:419849","SCTID:764629008"],"synonyms":[{"name":"Mosaic trisomy chromosome 5","type":"exact"},{"name":"Mosaic trisomy type 5","type":"exact"},{"name":"trisomy 5 mosaicism","type":"exact"}],"termid":"MONDO:0019866","xrefs":{"Monarch":{"xref_id":"0019866"}}}


id: PBO:0015239
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(8)","termid":"PBO:0015239"}


id: PBO:0067248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 321, pseudogene","termid":"PBO:0067248"}


id: FYPO:0000267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ionizing radiation during vegetative growth","synonyms":[{"name":"decreased vegetative cell population growth during cellular response to ionizing radiation","type":"exact"},{"name":"hypersensitive to ionizing radiation during vegetative growth","type":"exact"},{"name":"sensitive to IR during vegetative growth","type":"exact"},{"name":"sensitive to gamma irradiation during vegetative growth","type":"narrow"},{"name":"sensitive to gamma radiation during vegetative growth","type":"narrow"},{"name":"sensitive to ionizing radiation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000267"}


id: MONDO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyshormonogenic goiter","secondary_identifiers":["MEDGEN:508873","ICD9:246.1","SCTID:190304001","UMLS:C0152077","DOID:12175"],"termid":"MONDO:0001460","xrefs":{"Monarch":{"xref_id":"0001460"}}}


id: SO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence [5'-TCG(G/C)(A/T)xxTTxAA], bound by the transcription factor Pho7.","definition_xrefs":["PMID:28811350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho7_binding_site","synonyms":[{"name":"Pho7 binding site","type":"exact"}],"termid":"SO:0002216"}


id: MONDO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spinal stenosis that involves the lumbar region of vertebral column.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal stenosis","termid":"MONDO:0005965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar spinal stenosis","secondary_identifiers":["MEDGEN:488791","SCTID:18347007","UMLS:C0158288","HP:0004610","NCIT:C177445","ICD9:724.02"],"synonyms":[{"name":"lumbar region of vertebral column spinal stenosis","type":"exact"},{"name":"lumbar spinal stenosis","type":"exact"},{"name":"spinal stenosis of lumbar region","type":"exact"},{"name":"spinal stenosis of lumbar region of vertebral column","type":"exact"}],"termid":"MONDO:0044753","xrefs":{"Monarch":{"xref_id":"0044753"}}}


id: MONDO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes and extranodal sites. The clinical course is typically aggressive.","definition_xrefs":["PMID:22700722","NCIT:C7528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"angioimmunoblastic T-cell lymphoma","secondary_identifiers":["ICD10CM:C86.5","ICDO:9767/1","UMLS:C0020981","NORD:784","GARD:11973","MedDRA:10002449","ICD9:202.70","ICDO:9705/3","EFO:0000255","MEDGEN:7025","icd11.foundation:1254954229","MESH:D007119","NANDO:2200029","SCTID:413537009","Orphanet:86886","ONCOTREE:AITL","DOID:0111147"],"synonyms":[{"name":"AILD","type":"exact"},{"name":"AILT","type":"exact"},{"name":"AITL","type":"related"},{"name":"T-cell lymphoma, AILD type","type":"exact"},{"name":"angioimmunoblastic T-cell lymphoma","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy type T-cell lymphoma","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy with Dysproteinemia","type":"exact"},{"name":"immunoblastic lymphadenopathy","type":"exact"},{"name":"lymphogranulomatosis X","type":"exact"}],"termid":"MONDO:0004977","xrefs":{"Monarch":{"xref_id":"0004977"}}}


id: GO:0072559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, NLRP3 (NALP3), PYCARD and caspase-1. It is activated upon exposure to whole pathogens, as well as a number of structurally diverse pathogen- and danger-associated molecular patterns (PAMPs and DAMPs) and environmental irritants. Whole pathogens demonstrated to activate the NLRP3 inflammasome complex include the fungi Candida albicans and Saccharomyces cerevisiae, bacteria that produce pore-forming toxins, including Listeria monocytogenes and Staphylococcus aureus, and viruses such as Sendai virus, adenovirus, and influenza virus.","definition_xrefs":["PMID:20303873","GOC:add","GOC:BHF","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"NLRP3 inflammasome complex","synonyms":[{"name":"NALP3 inflammasome complex","type":"exact"}],"termid":"GO:0072559"}


id: PBO:0055468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2901","termid":"PBO:0055468"}


id: PBO:0067928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 230","termid":"PBO:0067928"}


id: GO:0102730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cathasterone + O2 + a reduced electron acceptor = teasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cathasterone hydroxylase activity (obsolete GO:0102730)","termid":"GO:0102730"}


id: SO:0000603
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group II introns are found in rRNA, tRNA and mRNA of organelles in fungi, plants and protists, and also in mRNA in bacteria. They are large self-splicing ribozymes and have 6 structural domains (usually designated dI to dVI). A subset of group II introns also encode essential splicing proteins in intronic ORFs. The length of these introns can therefore be up to 3kb. Splicing occurs in almost identical fashion to nuclear pre-mRNA splicing with two transesterification steps. The 2' hydroxyl of a bulged adenosine in domain VI attacks the 5' splice site, followed by nucleophilic attack on the 3' splice site by the 3' OH of the upstream exon. Protein machinery is required for splicing in vivo, and long range intron to intron and intron-exon interactions are important for splice site positioning. Group II introns are further sub-classified into groups IIA and IIB which differ in splice site consensus, distance of bulged A from 3' splice site, some tertiary interactions, and intronic ORF phylogeny.","direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_II_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_II_intron"],"synonyms":[{"name":"group II intron","type":"exact"}],"termid":"SO:0000603"}


id: GO:0050564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-2-aminoadipate + L-cysteine + L-valine + 3 ATP + H2O = N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + 3 AMP + 3 diphosphate + 6 H+.","definition_xrefs":["RHEA:23196","EC:6.3.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase activity","secondary_identifiers":["MetaCyc:6.3.2.26-RXN","KEGG_REACTION:R04870"],"synonyms":[{"name":"ACV synthetase activity","type":"broad"},{"name":"L-2-aminohexanedioate:L-cysteine:L-valine ligase (AMP-forming, valine-inverting)","type":"related"},{"name":"L-alpha-aminoadipyl-cysteinyl-valine synthetase activity","type":"related"},{"name":"L-delta-(alpha-aminoadipoyl)-L-cysteinyl-D-valine synthetase activity","type":"related"},{"name":"delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase activity","type":"exact"}],"termid":"GO:0050564"}


id: PBO:0038878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 5","termid":"PBO:0038878"}


id: GO:1900642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of austinol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of austinol biosynthetic process","termid":"GO:1900640"},{"relation_name":"positively_regulates","term_name":"austinol biosynthetic process","termid":"GO:1900560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of austinol biosynthetic process","synonyms":[{"name":"activation of austinol anabolism","type":"exact"},{"name":"activation of austinol biosynthesis","type":"exact"},{"name":"activation of austinol biosynthetic process","type":"narrow"},{"name":"activation of austinol formation","type":"exact"},{"name":"activation of austinol synthesis","type":"exact"},{"name":"positive regulation of austinol anabolism","type":"exact"},{"name":"positive regulation of austinol biosynthesis","type":"exact"},{"name":"positive regulation of austinol formation","type":"exact"},{"name":"positive regulation of austinol synthesis","type":"exact"},{"name":"up regulation of austinol anabolism","type":"exact"},{"name":"up regulation of austinol biosynthesis","type":"exact"},{"name":"up regulation of austinol biosynthetic process","type":"exact"},{"name":"up regulation of austinol formation","type":"exact"},{"name":"up regulation of austinol synthesis","type":"exact"},{"name":"up-regulation of austinol anabolism","type":"exact"},{"name":"up-regulation of austinol biosynthesis","type":"exact"},{"name":"up-regulation of austinol biosynthetic process","type":"exact"},{"name":"up-regulation of austinol formation","type":"exact"},{"name":"up-regulation of austinol synthesis","type":"exact"},{"name":"upregulation of austinol anabolism","type":"exact"},{"name":"upregulation of austinol biosynthesis","type":"exact"},{"name":"upregulation of austinol biosynthetic process","type":"exact"},{"name":"upregulation of austinol formation","type":"exact"},{"name":"upregulation of austinol synthesis","type":"exact"}],"termid":"GO:1900642"}


id: MONDO:0007750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypercholesterolemia","termid":"MONDO:0005439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"hypercholesterolemia, familial, 1","secondary_identifiers":["OMIM:143890","SCTID:398036000","MEDGEN:152875","UMLS:C0745103","NANDO:2200602"],"synonyms":[{"name":"FHC","type":"related"},{"name":"FHCL1","type":"exact"},{"name":"LDL cholesterol level QTL2","type":"exact"},{"name":"LDL receptor disorder","type":"exact"},{"name":"hyper-low-density-lipoproteinemia","type":"related"},{"name":"hypercholesterolemia, familial","type":"exact"},{"name":"hypercholesterolemia, familial, 1","type":"exact"},{"name":"hypercholesterolemia, familial, due to ldlr defect, modifier of","type":"exact"},{"name":"hypercholesterolemia, familial, modifier of","type":"exact"},{"name":"hypercholesterolemia, susceptibility to","type":"related"},{"name":"hypercholesterolemic xanthomatosis, familial","type":"exact"},{"name":"hyperlipoproteinemia, type 2","type":"exact"},{"name":"hyperlipoproteinemia, type 2A","type":"exact"},{"name":"low density lipoprotein cholesterol level quantitative trait locus 2","type":"related"}],"termid":"MONDO:0007750","xrefs":{"Monarch":{"xref_id":"0007750"}}}


id: PBO:0091207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln","termid":"PBO:0091207"}


id: PBO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 4","termid":"PBO:0043407"}


id: MONDO:1010033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly, non-human animal","secondary_identifiers":["OMIA:000478"],"termid":"MONDO:1010033","xrefs":{"Monarch":{"xref_id":"1010033"}}}


id: MOD:00000
data:
  {"annotated_genes":["SJAG_02763","SJAG_02489","SJAG_02694","SJAG_04953","SJAG_00827","SJAG_00432","SJAG_02592","SJAG_04067","SJAG_04238","SJAG_03524","SJAG_01626","SJAG_03861","SJAG_03009","SJAG_01162","SJAG_02827","SJAG_02980","SJAG_02435","SJAG_04149","SJAG_01970","SJAG_02972","SJAG_02472","SJAG_02260","SJAG_00937","SJAG_02183","SJAG_01766","SJAG_00096","SJAG_00043","SJAG_00288","SJAG_00331","SJAG_03632","SJAG_02205","SJAG_02902","SJAG_03290","SJAG_03671","SJAG_02504","SJAG_02522","SJAG_02766","SJAG_02388","SJAG_01488","SJAG_02498","SJAG_00784","SJAG_00318","SJAG_00733","SJAG_03914","SJAG_04819","SJAG_04553","SJAG_03641","SJAG_05230","SJAG_04972","SJAG_00109","SJAG_01587","SJAG_00254","SJAG_04125","SJAG_00464","SJAG_01671","SJAG_03012","SJAG_04551","SJAG_04789","SJAG_01029","SJAG_03032","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[80825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"},{"annotations":[80853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00793"},{"annotations":[80897,80926,81007,80909,81111,80813,81083,80877,80816,81069,80936,81115,80878,80879,80935,81082,81048,81110,80924,80908,80828,80943,80876,81017,80934,81047,80843,81080,81058,80817,81084,80814,81059,80842,81114,81112,80807,80815,81049,81116,80841,80806,80838,81072,81054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00689"},{"annotations":[80904,80874,80963,80809,80849,80864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00042"},{"annotations":[80888,80822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"},{"annotations":[80857,80854,80856,80967,80858,80968,80970,80952,80971,80855,80957,80953,80966,80954,80955,80969,80965,80956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00006"},{"annotations":[80805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00126"},{"annotations":[80804,80906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00123"},{"annotations":[80845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00127"},{"annotations":[80812,80811,80821,80851,80930,81079,81089,80882,81094,80922,80986,80940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00128"},{"annotations":[119652,119425,119426,80974,119650,119651,119653,80973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[81020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00159"},{"annotations":[119471,119470,119472,119747,119899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00696"},{"annotations":[81039,80988,81000,80978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue.","definition_xrefs":["PubMed:18688235"],"gene_count":61,"genes_by_uniquename":{"SJAG_00043":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00288":null,"SJAG_00318":null,"SJAG_00331":null,"SJAG_00432":null,"SJAG_00464":null,"SJAG_00733":null,"SJAG_00784":null,"SJAG_00827":null,"SJAG_00937":null,"SJAG_01029":null,"SJAG_01162":null,"SJAG_01488":null,"SJAG_01587":null,"SJAG_01626":null,"SJAG_01671":null,"SJAG_01766":null,"SJAG_01970":null,"SJAG_02183":null,"SJAG_02205":null,"SJAG_02260":null,"SJAG_02388":null,"SJAG_02435":null,"SJAG_02450":null,"SJAG_02472":null,"SJAG_02489":null,"SJAG_02498":null,"SJAG_02504":null,"SJAG_02522":null,"SJAG_02592":null,"SJAG_02694":null,"SJAG_02763":null,"SJAG_02766":null,"SJAG_02827":null,"SJAG_02902":null,"SJAG_02972":null,"SJAG_02980":null,"SJAG_03009":null,"SJAG_03012":null,"SJAG_03032":null,"SJAG_03290":null,"SJAG_03524":null,"SJAG_03632":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_04067":null,"SJAG_04125":null,"SJAG_04149":null,"SJAG_04238":null,"SJAG_04551":null,"SJAG_04553":null,"SJAG_04789":null,"SJAG_04819":null,"SJAG_04953":null,"SJAG_04972":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"protein modification","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:32915139":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:36408920":null},"synonyms":[{"name":"ModRes","type":"exact"}],"termid":"MOD:00000","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0036460":null,"GO:0042149":null,"GO:0071475":null,"GO:0120306":null,"GO:1904547":null,"MOD:00006":null,"MOD:00042":null,"MOD:00046":null,"MOD:00050":null,"MOD:00123":null,"MOD:00126":null,"MOD:00127":null,"MOD:00128":null,"MOD:00159":null,"MOD:00226":null,"MOD:00689":null,"MOD:00696":null,"MOD:00793":null,"MOD:01154":null}}


id: PBO:0068992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 236, pseudogene","termid":"PBO:0068992"}


id: GO:0000452
data:
  {"annotated_genes":["SJAG_00943","SJAG_00744","SJAG_02350","SJAG_02377","SJAG_03410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94465,99120,108405,110510,111655],"is_not":false,"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of methylation.","definition_xrefs":["ISBN:1555811337","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 2'-O-methylation","termid":"GO:0000451"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"snoRNA guided rRNA 2'-O-methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snoRNA guided rRNA 2'-O-ribose methylation","type":"related"}],"termid":"GO:0000452","terms_by_termid":{"GO:0000452":null}}


id: PBO:0057298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513b","termid":"PBO:0057298"}


id: MONDO:0008044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any myoclonus-dystonia syndrome in which the cause of the disease is a mutation in the SGCE gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus-dystonia syndrome","termid":"MONDO:0000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"myoclonic dystonia 11","secondary_identifiers":["OMIM:159900","GARD:18616","MEDGEN:331778","UMLS:C1834570","DOID:0090034"],"synonyms":[{"name":"DYT11","type":"related"},{"name":"SGCE myoclonus-dystonia syndrome","type":"exact"},{"name":"alcohol-responsive dystonia","type":"exact"},{"name":"dystonia 11, myoclonic","type":"related"},{"name":"dystonia, alcohol-responsive","type":"related"},{"name":"dystonia-11, myoclonic","type":"exact"},{"name":"myoclonic dystonia","type":"related"},{"name":"myoclonic dystonia 11","type":"exact"},{"name":"myoclonic dystonia type 11","type":"exact"},{"name":"myoclonus, hereditary essential","type":"related"},{"name":"myoclonus-dystonia syndrome","type":"related"},{"name":"myoclonus-dystonia syndrome caused by mutation in SGCE","type":"exact"}],"termid":"MONDO:0008044","xrefs":{"Monarch":{"xref_id":"0008044"}}}


id: GO:2000062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ureter smooth muscle cell differentiation.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell differentiation","termid":"GO:0051151"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of ureter smooth muscle cell differentiation","termid":"GO:2000061"},{"relation_name":"negatively_regulates","term_name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ureter smooth muscle cell differentiation","termid":"GO:2000062"}


id: GO:0071923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["PMID:17113138","GOC:lb","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin loading (obsolete GO:0071923)","synonyms":[{"name":"negative regulation of cohesin association with chromatin","type":"exact"},{"name":"negative regulation of cohesin localisation to chromatin","type":"exact"},{"name":"negative regulation of cohesin localization to chromatin","type":"related"}],"termid":"GO:0071923"}


id: PBO:0084251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol 1,3,4,5,6-pentakisphosphate 2-kinase; nuclear protein required for synthesis of 1,2,3,4,5,6-hexakisphosphate (phytate), which is integral to cell function; has 2 motifs conserved in other fungi; ipk1 gle1 double mutant is inviable; human IPPK can complement ipk1 null mutant","termid":"PBO:0084251"}


id: GO:0033116
data:
  {"annotated_genes":["SJAG_01116"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73247],"is_not":false,"summary":null,"term":"GO:0033116"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments of the endoplasmic reticulum (ER)-Golgi intermediate compartment system.","definition_xrefs":["GOC:mah","GOC:pr","PMID:16723730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endoplasmic reticulum-Golgi intermediate compartment","termid":"GO:0005793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01116":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum-Golgi intermediate compartment membrane","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ER-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:0033116","terms_by_termid":{"GO:0033116":null}}


id: GO:1901130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gentamycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"gentamycin metabolic process","termid":"GO:1901128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"gentamycin biosynthetic process","synonyms":[{"name":"gentamycin anabolism","type":"exact"},{"name":"gentamycin biosynthesis","type":"exact"},{"name":"gentamycin formation","type":"exact"},{"name":"gentamycin synthesis","type":"exact"}],"termid":"GO:1901130"}


id: PBO:0082987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic asparaginyl-tRNA synthetase; required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA","termid":"PBO:0082987"}


id: MONDO:0011589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia with coloboma 2","secondary_identifiers":["MESH:C565300","OMIM:605738","GARD:15385","UMLS:C1854018","MEDGEN:343030"],"synonyms":[{"name":"MCOPCB2","type":"exact"},{"name":"microphthalmia, colobomatous, isolated 2","type":"related"},{"name":"microphthalmia, isolated, with coloboma 2","type":"related"}],"termid":"MONDO:0011589","xrefs":{"Monarch":{"xref_id":"0011589"}}}


id: FYPO:0002867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of orotidine 5'-phosphate (orotidine monophosphate; OMP) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular OMP level","synonyms":[{"name":"increased OMP accumulation","type":"related"},{"name":"increased cellular OMP level during mitotic cell cycle","type":"related"},{"name":"increased cellular OMP level during vegetative growth","type":"exact"},{"name":"increased cellular orotidine 5'-(dihydrogen phosphate) level","type":"exact"},{"name":"increased cellular orotidine monophosphate level","type":"exact"}],"termid":"FYPO:0002867"}


id: GO:0072706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium dodecyl sulfate (SDS) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sodium dodecyl sulfate","synonyms":[{"name":"response to SDS","type":"exact"}],"termid":"GO:0072706"}


id: PBO:0060742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 7","termid":"PBO:0060742"}


id: PBO:0075033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-44","termid":"PBO:0075033"}


id: PBO:0077453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 3","termid":"PBO:0077453"}


id: GO:1900232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of single-species biofilm formation","termid":"GO:1900191"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"negatively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"down regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"down-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"downregulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"inhibition of single-species biofilm formation on inanimate substrate","type":"narrow"}],"termid":"GO:1900232"}


id: PBO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 19","termid":"PBO:0046638"}


id: PBO:0063025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase pseudogene 5","termid":"PBO:0063025"}


id: GO:0048515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid differentiation","synonyms":[{"name":"spermatid cell differentiation","type":"exact"}],"termid":"GO:0048515"}


id: MONDO:0004468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paget disease involving the squamous epithelium of the anal canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal Paget disease","termid":"MONDO:0002651"},{"relation_name":"is_a","term_name":"anal canal adenocarcinoma","termid":"MONDO:0002735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal canal Paget disease","secondary_identifiers":["SCTID:236811000119101","DOID:8119","MEDGEN:231062","NCIT:C7477","UMLS:C1332261"],"synonyms":[{"name":"Paget disease of the anal canal","type":"exact"},{"name":"Paget's disease of anal canal","type":"exact"},{"name":"Paget's disease of the anal canal","type":"exact"},{"name":"anal canal Paget disease","type":"exact"},{"name":"anal canal Paget's disease","type":"exact"},{"name":"anal canal mammary Paget's disease","type":"exact"}],"termid":"MONDO:0004468","xrefs":{"Monarch":{"xref_id":"0004468"}}}


id: GO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function.","definition_xrefs":["ISBN:068340007X","ISBN:0721662544","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mucus secretion","synonyms":[{"name":"mucus production","type":"exact"}],"termid":"GO:0070254"}


id: PBO:0013042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear exosome-associated RNA binding protein Mpp6","termid":"PBO:0013042"}


id: MONDO:0054696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 53","secondary_identifiers":["DOID:0111992","UMLS:C4539811","OMIM:617585","MEDGEN:1612104"],"synonyms":[{"name":"IMD53","type":"related"},{"name":"immunodeficiency 53","type":"exact"}],"termid":"MONDO:0054696","xrefs":{"Monarch":{"xref_id":"0054696"}}}


id: PBO:0057798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3120","termid":"PBO:0057798"}


id: GO:0045682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermis development","synonyms":[{"name":"regulation of epidermal development","type":"exact"},{"name":"regulation of hypodermis development","type":"related"}],"termid":"GO:0045682"}


id: PBO:0043244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 4","termid":"PBO:0043244"}


id: GO:0046947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"hydroxylysine metabolic process","termid":"GO:0046946"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"hydroxylysine biosynthetic process","synonyms":[{"name":"hydroxylysine anabolism","type":"exact"},{"name":"hydroxylysine biosynthesis","type":"exact"},{"name":"hydroxylysine formation","type":"exact"},{"name":"hydroxylysine synthesis","type":"exact"}],"termid":"GO:0046947"}


id: GO:0019395
data:
  {"annotated_genes":["SJAG_00706"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"}]},"cv_name":"biological_process","definition":"The removal of one or more electrons from a fatty acid, with or without the concomitant removal of a proton or protons, by reaction with an electron-accepting substance, by addition of oxygen or by removal of hydrogen.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fatty acid oxidation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0019395","terms_by_termid":{"GO:0001561":null}}


id: PBO:0065610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTP4A1 pseudogene 4","termid":"PBO:0065610"}


id: PBO:0003562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit Dpb4","termid":"PBO:0003562"}


id: PBO:0052726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 18","termid":"PBO:0052726"}


id: PBO:0057128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 211","termid":"PBO:0057128"}


id: MONDO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare diffuse large B-cell lymphoma that arises from the liver and the bulk of the tumor is located in the liver.","definition_xrefs":["NCIT:C96843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"liver lymphoma","termid":"MONDO:0004695"},{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005570","MONDO:0004992","MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"liver diffuse large B-cell lymphoma","secondary_identifiers":["UMLS:C2184126","MEDGEN:473542","EFO:1000323"],"synonyms":[{"name":"diffuse large B-cell lymphoma of liver","type":"exact"},{"name":"hepatic diffuse large B-cell lymphoma","type":"exact"},{"name":"liver diffuse large B-cell lymphoma","type":"exact"},{"name":"primary hepatic diffuse large B-cell lymphoma","type":"exact"},{"name":"primary liver diffuse large B-cell lymphoma","type":"exact"}],"termid":"MONDO:0006268","xrefs":{"Monarch":{"xref_id":"0006268"}}}


id: GO:0035143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the caudal fin are generated and organized. A caudal fin is an unpaired medial fin mounted at the caudal end of the fish, and is the main fin used for propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"caudal fin development","termid":"GO:0033336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caudal fin morphogenesis","termid":"GO:0035143"}


id: GO:0061169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"positively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair placode formation","termid":"GO:0061169"}


id: GO:1904449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2342602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"negatively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of aspartate secretion","synonyms":[{"name":"down regulation of aspartate secretion","type":"exact"},{"name":"down-regulation of aspartate secretion","type":"exact"},{"name":"downregulation of aspartate secretion","type":"exact"},{"name":"inhibition of aspartate secretion","type":"narrow"}],"termid":"GO:1904449"}


id: GO:0030521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by an androgen binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"androgen receptor signaling pathway","synonyms":[{"name":"androgen receptor signalling pathway","type":"exact"},{"name":"nuclear-receptor-mediated androgen receptor signaling pathway","type":"exact"}],"termid":"GO:0030521"}


id: PBO:0063268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 14","termid":"PBO:0063268"}


id: GO:2000908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucomannan catabolic process","termid":"GO:2000898"},{"relation_name":"is_a","term_name":"positive regulation of mannan catabolic process","termid":"GO:2000996"},{"relation_name":"positively_regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of glucomannan catabolic process","synonyms":[{"name":"positive regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000908"}


id: GO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase I promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase I promoter during mitotic cell cycle (obsolete GO:0046017)","synonyms":[{"name":"mitotic regulation of transcription from Pol I promoter","type":"exact"},{"name":"regulation of transcription from Pol I promoter during mitosis","type":"exact"},{"name":"regulation of transcription from RNA polymerase I promoter during mitosis","type":"exact"}],"termid":"GO:0046017"}


id: PBO:0043845
data:
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id: FYPO:0003949
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id: MONDO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta2M amyloidosis","secondary_identifiers":["Orphanet:439246","UMLS:C5680053","DOID:0080928","MEDGEN:1842860","icd11.foundation:448754119","GARD:21829"],"synonyms":[{"name":"Beta2-microglobulinic amyloidosis","type":"exact"}],"termid":"MONDO:0018590","xrefs":{"Monarch":{"xref_id":"0018590"}}}


id: PBO:0088247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11","termid":"PBO:0088247"}


id: PBO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport_during_vegetative_growth","termid":"PBO:0035867"}


id: MONDO:0010426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked endothelial corneal dystrophy (XECD) is a rare subtype of posterior corneal dystrophy characterized by congenital ground glass corneal clouding or a diffuse corneal haze, and blurred vision in male patients.","definition_xrefs":["Orphanet:293621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal endothelial dystrophy","termid":"MONDO:0000766"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked endothelial corneal dystrophy","secondary_identifiers":["UMLS:C2749049","SCTID:718579008","MEDGEN:413518","MESH:C567587","DOID:0060446","OMIM:300779","GARD:17339","icd11.foundation:1842066261"],"synonyms":[{"name":"XECD","type":"exact"},{"name":"corneal dystrophy, endothelial, X-linked","type":"related"},{"name":"corneal dystrophy, endothelial, X-linked, X-linked dominant","type":"exact"},{"name":"endothelial corneal dystrophy, X-linked","type":"related"}],"termid":"MONDO:0010426","xrefs":{"Monarch":{"xref_id":"0010426"}}}


id: FYPO:0004689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from cenH measured in a cell is higher than normal. cenH is a region located between mat2-P and mat3-M that is homologous to centromeric repeats, and that produces non-coding RNAs and small interfering RNAs.","definition_xrefs":["PomBase:mah","PMID:21253571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased cenH-derived RNA level","synonyms":[{"name":"accumulation of cenH-derived RNA transcripts","type":"related"},{"name":"increased cenH RNA level","type":"exact"},{"name":"increased cenH-derived RNA accumulation","type":"related"},{"name":"increased cenH-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased cenH-derived RNA level during vegetative growth","type":"exact"},{"name":"increased cenH-derived RNA transcript level","type":"exact"}],"termid":"FYPO:0004689"}


id: PBO:0029517
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_with_abnormal_cell_shape","termid":"PBO:0029517"}


id: GO:0019629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate that occurs in the 2-methylcitrate cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate catabolic process","termid":"GO:0019543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"propionate catabolic process, 2-methylcitrate cycle","synonyms":[{"name":"propionate breakdown, 2-methylcitrate cycle","type":"exact"},{"name":"propionate degradation, 2-methylcitrate cycle","type":"exact"}],"termid":"GO:0019629"}


id: PBO:0067897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 199","termid":"PBO:0067897"}


id: MONDO:0006341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian small cell carcinoma (obsolete MONDO:0006341)","termid":"MONDO:0006341","xrefs":{"Monarch":{"xref_id":"0006341"}}}


id: MONDO:0016430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumefactive multiple sclerosis is characterized by a tumor-like lesion larger than two centimeters and signs and symptoms similar to those of a brain tumor. It is a rare form of multiple sclerosis (MS). Symptoms of tumefactive MS often differ from other MS cases and may include, headaches, changes in thinking, confusion, speech problems, seizures, and weakness. The cause of tumefactive MS is not known. It often develops into the relapsing-remitting form of MS. In other cases there is only one occurrence of the condition. In still others the disease process remains less clear. While there is no cure for tumefactive MS, treatments such as corticosteroids are available to decrease disease activity.","definition_xrefs":["GARD:0005885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Balo concentric sclerosis","secondary_identifiers":["UMLS:C0004712","ICD9:341.1","SCTID:49692006","NANDO:1200028","NORD:835","MedDRA:10010252","DOID:0060215","Orphanet:228165","MEDGEN:498","NCIT:C35257","GARD:5885","SCTID:20415001","SCTID:230380005"],"synonyms":[{"name":"Balo Disease","type":"exact"},{"name":"Balo concentric sclerosis","type":"exact"},{"name":"Balo disease","type":"related"},{"name":"Balo's concentric sclerosis","type":"exact"},{"name":"Balo's disease","type":"related"},{"name":"Baló concentric sclerosis","type":"related"},{"name":"Marburg variant","type":"related"},{"name":"Tumefactive multiple sclerosis","type":"related"},{"name":"concentric demyelination","type":"exact"},{"name":"diffuse cerebral sclerosis of Schilder","type":"related"},{"name":"encephalitis periaxialis concentrica","type":"related"}],"termid":"MONDO:0016430","xrefs":{"Monarch":{"xref_id":"0016430"}}}


id: PBO:0081037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 13","termid":"PBO:0081037"}


id: PBO:0011978
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YFL046W","termid":"PBO:0011978"}


id: PBO:0083534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TSR2/YLR435W","termid":"PBO:0083534"}


id: PBO:0090633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap114","termid":"PBO:0090633"}


id: GO:0072052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}


id: MONDO:0004410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the penis and is characterized by the presence of malignant spindle-shaped cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma of penis","termid":"MONDO:0018352"},{"relation_name":"is_a","term_name":"sarcomatoid squamous cell carcinoma","termid":"MONDO:0021663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid penile squamous cell carcinoma","secondary_identifiers":["UMLS:C1335923","DOID:7958","MEDGEN:235580","NCIT:C6984"],"synonyms":[{"name":"sarcomatoid carcinoma of the penis","type":"exact"},{"name":"sarcomatoid penile carcinoma","type":"exact"},{"name":"sarcomatoid penile squamous cell carcinoma","type":"exact"},{"name":"sarcomatous carcinoma of the penis","type":"exact"},{"name":"spindle cell carcinoma of the penis","type":"exact"},{"name":"squamous cell carcinoma of penis, sarcomatoid type","type":"exact"},{"name":"squamous cell carcinoma of the penis, sarcomatoid type","type":"exact"}],"termid":"MONDO:0004410","xrefs":{"Monarch":{"xref_id":"0004410"}}}


id: PBO:0059692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 58","termid":"PBO:0059692"}


id: MONDO:1011947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscle contracture and chondrodysplasia, non-human animal","secondary_identifiers":["OMIA:000675"],"termid":"MONDO:1011947","xrefs":{"Monarch":{"xref_id":"1011947"}}}


id: PBO:0028312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_protein_coding_gene","termid":"PBO:0028312"}


id: PBO:0052970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 1","termid":"PBO:0052970"}


id: MONDO:1012273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombopathia, non-human animal","termid":"MONDO:1011695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopathia, dog","secondary_identifiers":["OMIA:001003-9615"],"termid":"MONDO:1012273","xrefs":{"Monarch":{"xref_id":"1012273"}}}


id: PBO:0081883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 831","termid":"PBO:0081883"}


id: PBO:0036165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_during_vegetative_growth","termid":"PBO:0036165"}


id: PBO:0051303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-43","termid":"PBO:0051303"}


id: PBO:0069261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 517, pseudogene","termid":"PBO:0069261"}


id: GO:0001811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type I hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type I hypersensitivity","termid":"GO:0001810"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type I hypersensitivity","termid":"GO:0016068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type I hypersensitivity","synonyms":[{"name":"down regulation of type I hypersensitivity","type":"exact"},{"name":"down-regulation of type I hypersensitivity","type":"exact"},{"name":"downregulation of type I hypersensitivity","type":"exact"},{"name":"inhibition of type I hypersensitivity","type":"narrow"}],"termid":"GO:0001811"}


id: PBO:0060605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 1","termid":"PBO:0060605"}


id: PBO:0060916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 3","termid":"PBO:0060916"}


id: FYPO:0007649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is abolished during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"},{"relation_name":"is_a","term_name":"abnormal protein localization to pericentric heterochromatin","termid":"FYPO:0007648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to pericentric heterochromatin during meiosis II","synonyms":[{"name":"abolished protein localization to centromeric heterochromatin during meiosis II","type":"exact"},{"name":"abolished protein localization to nuclear centromeric heterochromatin during meiosis II","type":"exact"},{"name":"abolished protein localization to pericentric heterochromatin during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007649"}


id: PBO:0073123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC11 homolog A, signal peptidase complex subunit","termid":"PBO:0073123"}


id: MONDO:0021124
data:
  {"annotated_genes":["SJAG_00377","SJAG_03720","SJAG_03698","SJAG_04950","SJAG_02294","SJAG_04114","SJAG_04738","SJAG_03418","SJAG_02954","SJAG_00103","SJAG_04148","SJAG_04703","SJAG_02339","SJAG_02690","SJAG_03051"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[86360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86767,86766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[86062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[86463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[87358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86952,86951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"Diminished or absent ability of a female to achieve conception.","definition_xrefs":["MESH:D007247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"female infertility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:N97","ICD9:628.9","MEDGEN:5795","SCTID:6738008","icd11.foundation:1237004558","EFO:0008560","UMLS:C0021361","ICD9:628.8"],"synonyms":[{"name":"female infertility","type":"exact"},{"name":"female reproductive system infertility","type":"exact"},{"name":"female reproductive system infertility disorder","type":"exact"},{"name":"female sterility","type":"related"},{"name":"female sub-fertility","type":"related"},{"name":"female subfertility","type":"related"},{"name":"infertility disorder of female reproductive system","type":"exact"},{"name":"postpartum sterility","type":"related"},{"name":"sterility, female","type":"related"},{"name":"sterility, postpartum","type":"related"},{"name":"sub fertility, female","type":"related"},{"name":"sub-fertility, female","type":"related"},{"name":"subfertility, female","type":"related"}],"termid":"MONDO:0021124","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0021124"}}}


id: PBO:0053466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 428","termid":"PBO:0053466"}


id: GO:0032645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045423"],"synonyms":[{"name":"regulation of GM-CSF production","type":"exact"},{"name":"regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032645"}


id: MONDO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal enterocele (obsolete MONDO:0001589)","secondary_identifiers":["MESH:D006547","ICD9:618.6","DOID:1283","SCTID:398061002"],"synonyms":[{"name":"enterocele","type":"broad"},{"name":"vaginal hernia","type":"related"}],"termid":"MONDO:0001589","xrefs":{"Monarch":{"xref_id":"0001589"}}}


id: FYPO:0005540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of telomerase RNA reverse transcriptase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal telomerase RNA reverse transcriptase activity","termid":"FYPO:0005539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000002","FYPO:0005447","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased telomerase RNA reverse transcriptase activity","synonyms":[{"name":"decreased telomerase activity","type":"broad"},{"name":"reduced telomerase RNA reverse transcriptase activity","type":"exact"}],"termid":"FYPO:0005540"}


id: MONDO:0016843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20q13.33 is a rare chromosomal anomaly syndrome resulting from the partial deletion of the long arm of chromosome 20 with a highly variable phenotype typically characterized by hypotonia, intellectual disability, cognitive and language deficits (including decreased or absent speech), pre and post-natal growth retardation, feeding difficulties, microcephaly, and malformed hands and feet. Neurodevelopmental disorders (including hyperactivity, social interactive problems and autism spectrum disorder), seizures and dysmorphic facial features (high forehead, hypertelorism, malformed ears, broad nasal bridge, bulbous nasal tip, thin upper lip, small chin) are frequently associated.","definition_xrefs":["Orphanet:261311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20q13.33 microdeletion syndrome","secondary_identifiers":["MEDGEN:1384661","UMLS:C4518823","SCTID:733520002","GARD:20778"],"synonyms":[{"name":"Del(20)(q13.33)","type":"exact"},{"name":"monosomy 20q13.33","type":"exact"}],"termid":"MONDO:0016843","xrefs":{"Monarch":{"xref_id":"0016843"}}}


id: PBO:0091232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane heme transmembrane transporter Str3","termid":"PBO:0091232"}


id: PBO:0052040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JunD proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052040"}


id: FYPO:0003405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000707","FYPO:0005447","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased glyoxalase III activity","synonyms":[{"name":"reduced glyoxalase III activity","type":"exact"}],"termid":"FYPO:0003405"}


id: PBO:0034402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_downstream_target_(obsolete_has_downstream_target)","termid":"PBO:0034402"}


id: GO:0006616
data:
  {"annotated_genes":["SJAG_00064","SJAG_00959","SJAG_02208","SJAG_04129","SJAG_03684","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73534,74029,75768,98378,102900,108626],"is_not":false,"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process during cotranslational membrane targeting wherein proteins move across a membrane. SRP and its receptor initiate the transfer of the nascent chain across the endoplasmic reticulum (ER) membrane; they then dissociate from the chain, which is transferred to a set of transmembrane proteins, collectively called the translocon. Once the nascent chain translocon complex is assembled, the elongating chain passes directly from the large ribosomal subunit into the centers of the translocon, a protein-lined channel within the membrane. The growing chain is never exposed to the cytosol and does not fold until it reaches the ER lumen.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transmembrane transport","termid":"GO:0065002"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03684":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0006605","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER translocation","type":"broad"},{"name":"SRP-dependent cotranslational membrane targeting, translocation","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, translocation","type":"exact"},{"name":"translocation during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006616","terms_by_termid":{"GO:0006616":null}}


id: GO:1903829
data:
  {"annotated_genes":["SJAG_02592","SJAG_03453","SJAG_01805","SJAG_04312","SJAG_03048","SJAG_04464","SJAG_03602","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111323,100763,102170,94147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[102701,91189,94709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[98756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a protein localization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of cellular protein localisation","type":"exact"},{"name":"positive regulation of cellular protein localization","type":"exact"},{"name":"up regulation of cellular protein localisation","type":"exact"},{"name":"up regulation of cellular protein localization","type":"exact"},{"name":"up-regulation of cellular protein localisation","type":"exact"},{"name":"up-regulation of cellular protein localization","type":"exact"},{"name":"upregulation of cellular protein localisation","type":"exact"},{"name":"upregulation of cellular protein localization","type":"exact"}],"termid":"GO:1903829","terms_by_termid":{"GO:0042307":null,"GO:0046827":null,"GO:0120047":null}}


id: GO:1900635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heptadecane.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkane metabolic process","termid":"GO:0043446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heptadecane metabolic process","synonyms":[{"name":"heptadecane metabolism","type":"exact"}],"termid":"GO:1900635"}


id: PR:Q9UTF6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 5A, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01180","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.04","secondary_identifiers":["UniProtKB:Q9UTF6"],"synonyms":[{"name":"Spom972h-COX5A","type":"exact"},{"name":"cytochrome c oxidase polypeptide VI (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF6"}


id: PBO:0055165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2585","termid":"PBO:0055165"}


id: GO:0120547
data:
  {"annotated_genes":["SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93537],"is_not":false,"summary":null,"term":"GO:0120547"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Fe(II)-heme o + 2 acceptor + H2O = Fe(II)-heme a + 2 acceptor-H2. The conversion of heme o to heme a occcurs by two successive hydroxylations of the methyl group at C8 using water as the oxygen source. The first hydroxylation forms heme i, the second hydroxylation results in an unstable dihydroxymethyl group, which spontaneously dehydrates, resulting in the formyl group of heme A.","definition_xrefs":["RHEA:63388","PMID:30397130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"heme A synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.17.99.9","MetaCyc:RXN-18399"],"termid":"GO:0120547","terms_by_termid":{"GO:0120547":null}}


id: FYPO:0005925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during mitosis is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during mitosis","synonyms":[{"name":"normal protein accumulation during mitosis","type":"related"},{"name":"normal protein level during mitosis during vegetative growth","type":"exact"},{"name":"normal protein level during mitotic M phase","type":"related"},{"name":"normal protein level during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0005925"}


id: PBO:0078316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 1","termid":"PBO:0078316"}


id: GO:1900818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ochratoxin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"ochratoxin A metabolic process","termid":"GO:1900816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"ochratoxin A biosynthetic process","synonyms":[{"name":"Ochratoxin A anabolism","type":"exact"},{"name":"Ochratoxin A biosynthesis","type":"exact"},{"name":"Ochratoxin A formation","type":"exact"},{"name":"Ochratoxin A synthesis","type":"exact"}],"termid":"GO:1900818"}


id: GO:0099540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a peptide ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"},{"relation_name":"is_a","term_name":"synaptic signaling via neuropeptide","termid":"GO:0099538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"}


id: PBO:0079093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 6-1","termid":"PBO:0079093"}


id: GO:0009501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plastid whose main function is to synthesize and store starch.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast","secondary_identifiers":["Wikipedia:Amyloplast"],"termid":"GO:0009501"}


id: GO:0010846
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108281],"is_not":false,"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that starts the inactive process of reciprocal meiotic recombination. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of reciprocal meiotic recombination","termid":"GO:0010845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0008150","GO:0006259","GO:0140013"],"is_obsolete":false,"name":"activation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic recombination","type":"related"}],"termid":"GO:0010846","terms_by_termid":{"GO:0010846":null}}


id: PBO:0091625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfate transmembrane transporter Sul2","termid":"PBO:0091625"}


id: PBO:0083435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YLR040C","termid":"PBO:0083435"}


id: GO:0033031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of neutrophil apoptotic process","termid":"GO:0033029"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"positively_regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil apoptotic process","synonyms":[{"name":"activation of neutrophil apoptosis","type":"narrow"},{"name":"positive regulation of neutrophil apoptosis","type":"narrow"},{"name":"stimulation of neutrophil apoptosis","type":"narrow"},{"name":"up regulation of neutrophil apoptosis","type":"exact"},{"name":"up-regulation of neutrophil apoptosis","type":"exact"},{"name":"upregulation of neutrophil apoptosis","type":"exact"}],"termid":"GO:0033031"}


id: PR:O13942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.12c gene.","definition_xrefs":["UniProtKB:O13942","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.12c","synonyms":[{"name":"Spom972h-SPAC23H3.12c","type":"exact"}],"termid":"PR:O13942"}


id: PBO:0053289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 2","termid":"PBO:0053289"}


id: MONDO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the mediastinum. Representative examples include mediastinal (thymic) large B-cell lymphoma and Hodgkin lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"mediastinal malignant lymphoma","secondary_identifiers":["DOID:6868","NCIT:C6633","UMLS:C1334665","MEDGEN:235311"],"synonyms":[{"name":"lymphoma of mediastinum","type":"exact"},{"name":"lymphoma of the mediastinum","type":"exact"},{"name":"mediastinal lymphoma","type":"exact"},{"name":"mediastinal malignant lymphoma","type":"exact"},{"name":"mediastinum lymphoma","type":"exact"},{"name":"primary mediastinal lymphoma","type":"exact"}],"termid":"MONDO:0004021","xrefs":{"Monarch":{"xref_id":"0004021"}}}


id: GO:0015021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of sulfate; appears to act on linkages between N-acetyl-D-glucosamine and uronate. Product is an unsaturated sugar.","definition_xrefs":["EC:4.2.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heparin-sulfate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.8-RXN"],"synonyms":[{"name":"[heparan sulfate]-sulfate lyase activity","type":"related"},{"name":"heparin-sulfate eliminase activity","type":"related"},{"name":"heparin-sulphate lyase activity","type":"exact"},{"name":"heparitin-sulfate lyase activity","type":"exact"},{"name":"heparitinase I","type":"related"},{"name":"heparitinase II","type":"related"}],"termid":"GO:0015021"}


id: PBO:0001020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine","termid":"PBO:0001020"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: MONDO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder in which an individual experiences recurrent, unexpected panic attacks and persistent concern about having additional panic attacks. Agoraphobia is a component of this disorder.","definition_xrefs":["NCIT:C97194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agoraphobia","termid":"MONDO:0003709"},{"relation_name":"is_a","term_name":"panic disorder","termid":"MONDO:0005383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder with agoraphobia","secondary_identifiers":["SCTID:35607004","MEDGEN:472969","UMLS:C0236800"],"synonyms":[{"name":"panic disorder with agoraphobia","type":"exact"}],"termid":"MONDO:0044144","xrefs":{"Monarch":{"xref_id":"0044144"}}}


id: GO:0009262
data:
  {"annotated_genes":["SJAG_04657","SJAG_02948","SJAG_04487","SJAG_00885","SJAG_04665","SJAG_04627","SJAG_02874","SJAG_03771","SJAG_01348"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97412],"is_not":false,"summary":null,"term":"GO:0009262"},{"annotations":[72383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[107572,92778,95821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[99314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"},{"annotations":[71368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70277,79842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[71369,68982,92779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[71367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[70276,79815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[79813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a deoxyribonucleotide, a compound consisting of deoxyribonucleoside (a base linked to a deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_01348":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0009393","GO:0009122"],"synonyms":[{"name":"deoxyribonucleotide metabolism","type":"exact"}],"termid":"GO:0009262","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009262":null,"GO:0009265":null,"GO:0035863":null,"GO:0046081":null}}


id: PBO:0087950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF4G and scaffold protein; subunit of the mRNA cap-binding protein complex (eIF4F) with eIF4E (Cdc33p) and eIF4A (Tif1p/Tif2p); stimulates the ATPase and helicase activities of eIF4A synergistically with eIF4G; required with eIF4E for Ded1p-mediated stimulation of mRNA recruitment during 48S preinitiation complex (PIC) assembly; association with Pab1p mediates poly(A) tail-stimulated translation; role in biogenesis of the 60S ribosomal subunit","termid":"PBO:0087950"}


id: GO:0006122
data:
  {"annotated_genes":["SJAG_02646","SJAG_01763","SJAG_00601","SJAG_03490","SJAG_01490","SJAG_00080","SJAG_07006","SJAG_00755","SJAG_MIT03","SJAG_02744"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61897,72449,74066,76034,76188,76631,104394,113708,117983,119354],"is_not":false,"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"The transfer of electrons from ubiquinol to cytochrome c that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex III.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic electron transport chain","termid":"GO:0019646"},{"relation_name":"part_of","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_01490":null,"SJAG_01763":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_07006":null,"SJAG_MIT03":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"mitochondrial electron transport, ubiquinol to cytochrome c","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"complex III (ubiquinone to cytochrome c)","type":"related"}],"termid":"GO:0006122","terms_by_termid":{"GO:0006122":null}}


id: PBO:0080074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP37 pseudogene 1","termid":"PBO:0080074"}


id: GO:0047180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (7S)-salutaridinol + acetyl-CoA = (7S)-O-acetylsalutaridinol + CoA.","definition_xrefs":["RHEA:22856","EC:2.3.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"salutaridinol 7-O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04723","MetaCyc:2.3.1.150-RXN"],"synonyms":[{"name":"acetyl-CoA:salutaridinol 7-O-acetyltransferase activity","type":"related"}],"termid":"GO:0047180"}


id: GO:0102883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate = (+)-beta-chamigrene + diphosphate.","definition_xrefs":["RHEA:30379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"(+)-beta-chamigrene synthase activity","secondary_identifiers":["MetaCyc:RXN-8424","EC:4.2.3.78"],"termid":"GO:0102883"}


id: MONDO:0009003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achromatopsia 2 is a condition that affects the color vision. Most people have complete achromatopsia which is characterized by a total absence of color vision (only able to see black, white and shades of gray). Rarely, affected people may have incomplete achromatopsia which is associated with some color discrimination. Other common signs and symptoms include reduced visual acuity, involuntary back-and-forth eye movements, increased sensitivity to light (photophobia), and hyperopia (farsightedness). Achromatopsia 2 is caused by changes (mutations) in the CNGA3 gene and is inherited in an autosomal recessive manner. Although color discrimination cannot be improved, treatments are available to address some of the other associated symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"achromatopsia","termid":"MONDO:0018852"},{"relation_name":"is_a","term_name":"CNGA3-related retinopathy","termid":"MONDO:0800102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"achromatopsia 2","secondary_identifiers":["NCIT:C168757","UMLS:C1857618","GARD:9649","DOID:0110007","MEDGEN:387867","OMIM:216900","MESH:C536128"],"synonyms":[{"name":"ACHM2","type":"exact"},{"name":"CNGA3 achromatopsia","type":"exact"},{"name":"RMCH2","type":"exact"},{"name":"Rod monochromacy 2","type":"related"},{"name":"Rod monochromatism 2","type":"related"},{"name":"achromatopsia 2","type":"exact"},{"name":"achromatopsia caused by mutation in CNGA3","type":"exact"},{"name":"achromatopsia type 2","type":"exact"},{"name":"colorblindness, total","type":"related"},{"name":"rod monochromacy 2","type":"exact"},{"name":"rod monochromatism 2","type":"exact"}],"termid":"MONDO:0009003","xrefs":{"Monarch":{"xref_id":"0009003"}}}


id: MOD:00495
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:12185208","Unimod:124#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-iodoacetyl, p-chlorobenzyl-13C6-glucamine","synonyms":[{"name":"ICAT-H:13C(6)","type":"related"},{"name":"N-iodoacetyl, p-chlorobenzyl-13C6-glucamine","type":"related"}],"termid":"MOD:00495"}


id: MONDO:0800408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urogenital adysplasia","secondary_identifiers":["MEDGEN:436071","UMLS:C2674045"],"termid":"MONDO:0800408","xrefs":{"Monarch":{"xref_id":"0800408"}}}


id: GO:0006762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrofolate reduction (obsolete GO:0006762)","synonyms":[{"name":"dihydrofolate reduction","type":"exact"}],"termid":"GO:0006762"}


id: PBO:0091420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD binding dehydrogenase family protein, human DHDH ortholog, unknown biological role, implicated in carbohydrate metabolic process","termid":"PBO:0091420"}


id: GO:0070419
data:
  {"annotated_genes":["SJAG_02237","SJAG_04199","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80444,100263,116622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A protein complex that plays a role in DNA double-strand break repair via nonhomologous end joining. Such complexes typically contain a specialized DNA ligase (e.g. Lig4 in eukaryotes) and one or more proteins that bind to DNA ends.","definition_xrefs":["PMID:17938628","PMID:17072889","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nonhomologous end joining complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ complex","type":"exact"},{"name":"non-homologous end joining complex","type":"exact"}],"termid":"GO:0070419","terms_by_termid":{"GO:0032807":null}}


id: MONDO:0700170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm that occurs in a horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equine neoplasm","termid":"MONDO:0700170","xrefs":{"Monarch":{"xref_id":"0700170"}}}


id: MONDO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paratyphoid fever (obsolete MONDO:0005897)","termid":"MONDO:0005897","xrefs":{"Monarch":{"xref_id":"0005897"}}}


id: PBO:0075401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm autoantigenic protein 17","termid":"PBO:0075401"}


id: PBO:0066522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGMB antisense RNA 1","termid":"PBO:0066522"}


id: PBO:0055314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2742","termid":"PBO:0055314"}


id: MONDO:0004809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cannabis abuse (obsolete MONDO:0004809)","termid":"MONDO:0004809","xrefs":{"Monarch":{"xref_id":"0004809"}}}


id: GO:0052140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in host (obsolete GO:0052140)","synonyms":[{"name":"positive chemotaxis within host","type":"exact"}],"termid":"GO:0052140"}


id: GO:0046976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 27) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 27). This reaction is the addition of a methyl group to the lysine residue at position 27 of the histone H3 protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0008276","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3240295"],"synonyms":[{"name":"histone H3K27 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone methylase activity (H3-K27 specific)","type":"exact"},{"name":"histone methylase activity (H3-K56 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone-H3K27 methyltransferase activity","type":"exact"}],"termid":"GO:0046976"}


id: PBO:0001093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp17 (predicted)","termid":"PBO:0001093"}


id: MONDO:0024873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the clitoris.","definition_xrefs":["NCIT:C9362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clitoris cancer","termid":"MONDO:0002290"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clitoral carcinoma","secondary_identifiers":["MEDGEN:234155","UMLS:C1333070"],"synonyms":[{"name":"carcinoma of clitoris","type":"exact"},{"name":"carcinoma of the clitoris","type":"exact"},{"name":"clitoral cancer","type":"broad"},{"name":"clitoral carcinoma","type":"exact"},{"name":"clitoris carcinoma","type":"exact"}],"termid":"MONDO:0024873","xrefs":{"Monarch":{"xref_id":"0024873"}}}


id: PR:Q09094
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.14","synonyms":[{"name":"Spom972h-rec15","type":"exact"}],"termid":"PR:Q09094"}


id: MONDO:0035499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic primary lymphedema characterized by unilateral or bilateral lower limb lymphedema of variable severity. The condition shows almost complete penetrance with onset in childhood or adolescence in females, whereas in males it shows incomplete penetrance with later onset of disease. Lymphoscintigraphy in more severely affected individuals reveals lymphatic abnormalities consistent with lymphangiectasia, valve dysfunction, and thoracic duct reflux.","definition_xrefs":["Orphanet:569816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"CELSR1-related late-onset primary lymphedema","secondary_identifiers":["MEDGEN:1802645","GARD:22306","UMLS:C5681848"],"termid":"MONDO:0035499","xrefs":{"Monarch":{"xref_id":"0035499"}}}


id: SO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tag produced from a single sequencing read from a cDNA clone or PCR product; typically a few hundred base pairs long.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"mRNA","termid":"SO:0000234"},{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST","synonyms":[{"name":"expressed sequence tag","type":"exact"}],"termid":"SO:0000345"}


id: MONDO:0031432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal","secondary_identifiers":["OMIMPS:609698","UMLS:C1864761","MEDGEN:355288"],"termid":"MONDO:0031432","xrefs":{"Monarch":{"xref_id":"0031432"}}}


id: GO:0070896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transposon integration, a process in which a transposable element is incorporated into another DNA molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transposon integration (obsolete GO:0070896)","synonyms":[{"name":"activation of transposon integration","type":"narrow"},{"name":"stimulation of transposon integration","type":"narrow"},{"name":"up regulation of transposon integration","type":"exact"},{"name":"up-regulation of transposon integration","type":"exact"},{"name":"upregulation of transposon integration","type":"exact"}],"termid":"GO:0070896"}


id: PBO:0045382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 4","termid":"PBO:0045382"}


id: GO:1901310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of sterol regulatory element binding protein cleavage.","definition_xrefs":["PMID:16525117","GOC:TermGenie","PMID:15899885"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sterol regulatory element binding protein cleavage (obsolete GO:1901310)","synonyms":[{"name":"activation of SREBP cleavage","type":"exact"},{"name":"activation of sterol regulatory element binding protein cleavage","type":"narrow"},{"name":"positive regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of SREBP cleavage","type":"exact"},{"name":"up regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"up-regulation of SREBP cleavage","type":"exact"},{"name":"up-regulation of sterol regulatory element binding protein cleavage","type":"exact"},{"name":"upregulation of SREBP cleavage","type":"exact"},{"name":"upregulation of sterol regulatory element binding protein cleavage","type":"exact"}],"termid":"GO:1901310"}


id: GO:0042272
data:
  {"annotated_genes":["SJAG_00178","SJAG_04721"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101713,106067],"is_not":false,"summary":null,"term":"GO:0042272"}]},"cv_name":"cellular_component","definition":"A protein complex that contains two proteins (know in several organisms, including Drosophila, as NXF1 and NXF2) and is required for the export of the majority of mRNAs from the nucleus to the cytoplasm; localized in the nucleoplasm and at both the nucleoplasmic and cytoplasmic faces of the nuclear pore complex; shuttles between the nucleus and the cytoplasm.","definition_xrefs":["PMID:11780633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_04721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear RNA export factor complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Mex67-Mtr2 complex","type":"exact"},{"name":"NXF1-NXT1 complex","type":"exact"},{"name":"TAP-p15 complex","type":"exact"}],"termid":"GO:0042272","terms_by_termid":{"GO:0042272":null}}


id: PBO:0050848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 1","termid":"PBO:0050848"}


id: PBO:0029602
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transporter_activity","termid":"PBO:0029602"}


id: PBO:0028898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_pear-shaped_vegetative_cell","termid":"PBO:0028898"}


id: MONDO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the bladder resulting in bloody urine.","definition_xrefs":["NCIT:C114666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic cystitis","secondary_identifiers":["SCTID:87696004","UMLS:C0085692","DOID:0050859","MEDGEN:508360"],"termid":"MONDO:0000496","xrefs":{"Monarch":{"xref_id":"0000496"}}}


id: PBO:0057354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-2","termid":"PBO:0057354"}


id: PBO:0053493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 471","termid":"PBO:0053493"}


id: PBO:0072153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 30","termid":"PBO:0072153"}


id: PBO:0062715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily L member 1","termid":"PBO:0062715"}


id: GO:0019800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptide chains mediated by a chondroitin 4-sulfate glycosaminoglycan that originates from a typical O-glycosidic link to serine of one chain; the other chain is esterified, via the alpha-carbon of its C-terminal Asp, to C-6 of an internal N-acetylgalactosamine of the glycosaminoglycan chain.","definition_xrefs":["PMID:1898736","RESID:AA0219"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan (obsolete GO:0019800)","synonyms":[{"name":"peptide cross-linking via chondroitin 4-sulphate glycosaminoglycan","type":"exact"}],"termid":"GO:0019800"}


id: GO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of xylose.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"D-xylose catabolic process","termid":"GO:0042843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of D-xylose catabolic process","termid":"GO:0043469"}


id: PBO:0068029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 334","termid":"PBO:0068029"}


id: MONDO:0004699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises from any part of the digestive system, with the bulk of the disease localized to that site.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastrointestinal lymphoma","secondary_identifiers":["NCIT:C38162","ICD9:202.80","MEDGEN:148147","SCTID:449072004","DOID:903","UMLS:C0740372"],"synonyms":[{"name":"digestive system lymphoma","type":"exact"},{"name":"gastrointestinal lymphoma","type":"exact"},{"name":"lymphoma of digestive system","type":"exact"},{"name":"primary digestive system lymphoma","type":"exact"},{"name":"primary gastrointestinal lymphoma","type":"exact"}],"termid":"MONDO:0004699","xrefs":{"Monarch":{"xref_id":"0004699"}}}


id: GO:1904734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of electron transfer activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:25416781"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of electron transfer activity (obsolete GO:1904734)","synonyms":[{"name":"activation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"activation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"activation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"activation of amicyanin","type":"narrow"},{"name":"activation of azurin","type":"narrow"},{"name":"activation of bacterial-type ferredoxin","type":"narrow"},{"name":"activation of chloroplast-type ferredoxin","type":"narrow"},{"name":"activation of copper electron carrier","type":"narrow"},{"name":"activation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of electron acceptor activity","type":"narrow"},{"name":"activation of electron carrier activity","type":"narrow"},{"name":"activation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"activation of electron donor activity","type":"narrow"},{"name":"activation of electron transfer flavoprotein","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"activation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"activation of electron transporter activity","type":"narrow"},{"name":"activation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"activation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"activation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"activation of mononuclear iron electron carrier","type":"narrow"},{"name":"activation of polyferredoxin","type":"narrow"},{"name":"activation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"activation of rubredoxin","type":"narrow"},{"name":"activation of small blue copper electron carrier","type":"narrow"},{"name":"activation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"positive regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"positive regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"positive regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"positive regulation of amicyanin","type":"narrow"},{"name":"positive regulation of azurin","type":"narrow"},{"name":"positive regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"positive regulation of copper electron carrier","type":"narrow"},{"name":"positive regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of electron acceptor activity","type":"narrow"},{"name":"positive regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"positive regulation of electron donor activity","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"positive regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"positive regulation of electron transporter activity","type":"related"},{"name":"positive regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"positive regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"positive regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"positive regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"positive regulation of polyferredoxin","type":"narrow"},{"name":"positive regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"positive regulation of rubredoxin","type":"narrow"},{"name":"positive regulation of small blue copper electron carrier","type":"narrow"},{"name":"positive regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up regulation of amicyanin","type":"narrow"},{"name":"up regulation of azurin","type":"narrow"},{"name":"up regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up regulation of copper electron carrier","type":"narrow"},{"name":"up regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of electron acceptor activity","type":"narrow"},{"name":"up regulation of electron carrier activity","type":"related"},{"name":"up regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up regulation of electron donor activity","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up regulation of electron transporter activity","type":"related"},{"name":"up regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up regulation of polyferredoxin","type":"narrow"},{"name":"up regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up regulation of rubredoxin","type":"narrow"},{"name":"up regulation of small blue copper electron carrier","type":"narrow"},{"name":"up regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"up-regulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"up-regulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"up-regulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"up-regulation of amicyanin","type":"narrow"},{"name":"up-regulation of azurin","type":"narrow"},{"name":"up-regulation of bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"up-regulation of copper electron carrier","type":"narrow"},{"name":"up-regulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of electron acceptor activity","type":"narrow"},{"name":"up-regulation of electron carrier activity","type":"related"},{"name":"up-regulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"up-regulation of electron donor activity","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"up-regulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"up-regulation of electron transporter activity","type":"related"},{"name":"up-regulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"up-regulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"up-regulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"up-regulation of mononuclear iron electron carrier","type":"narrow"},{"name":"up-regulation of polyferredoxin","type":"narrow"},{"name":"up-regulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"up-regulation of rubredoxin","type":"narrow"},{"name":"up-regulation of small blue copper electron carrier","type":"narrow"},{"name":"up-regulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"},{"name":"upregulation of 2Fe-2S electron transfer carrier","type":"narrow"},{"name":"upregulation of 3Fe-4S/4Fe-4S electron transfer carrier","type":"narrow"},{"name":"upregulation of adrenodoxin-type ferredoxin","type":"narrow"},{"name":"upregulation of amicyanin","type":"narrow"},{"name":"upregulation of azurin","type":"narrow"},{"name":"upregulation of bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of chloroplast-type ferredoxin","type":"narrow"},{"name":"upregulation of copper electron carrier","type":"narrow"},{"name":"upregulation of dicluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of electron acceptor activity","type":"narrow"},{"name":"upregulation of electron carrier activity","type":"related"},{"name":"upregulation of electron carrier, chlorophyll electron transport system","type":"related"},{"name":"upregulation of electron donor activity","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group I","type":"narrow"},{"name":"upregulation of electron transfer flavoprotein, group II","type":"narrow"},{"name":"upregulation of electron transporter activity","type":"related"},{"name":"upregulation of high-potential iron-sulfur carrier","type":"narrow"},{"name":"upregulation of iron-sulfur electron transfer carrier","type":"narrow"},{"name":"upregulation of monocluster bacterial-type ferredoxin","type":"narrow"},{"name":"upregulation of mononuclear iron electron carrier","type":"narrow"},{"name":"upregulation of polyferredoxin","type":"narrow"},{"name":"upregulation of redox-active disulfide bond electron carrier","type":"narrow"},{"name":"upregulation of rubredoxin","type":"narrow"},{"name":"upregulation of small blue copper electron carrier","type":"narrow"},{"name":"upregulation of thioredoxin-like 2Fe-2S ferredoxin","type":"narrow"}],"termid":"GO:1904734"}


id: GO:2000653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of genetic imprinting.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of genetic imprinting (obsolete GO:2000653)","synonyms":[{"name":"regulation of DNA imprinting","type":"exact"}],"termid":"GO:2000653"}


id: FYPO:0008276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a polyphosphatase activity is absent.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished polyphosphatase activity","termid":"FYPO:0008276"}


id: GO:0010832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"negatively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myotube differentiation","termid":"GO:0010832"}


id: GO:0072335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin involved in neural crest cell differentiation. The Wnt signaling pathway is the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in neural crest cell differentiation (obsolete GO:0072335)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway through beta-catenin involved in neural crest cell differentiation","type":"exact"},{"name":"regulation of canonical Wnt receptor signaling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in neural crest cell differentiation","type":"exact"}],"termid":"GO:0072335"}


id: PBO:0085529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S28, no bacterial homolog; has an extraribosomal function in autoregulation, in which Rps28Bp binds to a decapping complex via Edc3p, which then binds to RPS28B mRNA leading to its decapping and degradation; RPS28B has a paralog, RPS28A, that arose from the whole genome duplication","termid":"PBO:0085529"}


id: PBO:0073698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 3","termid":"PBO:0073698"}


id: PBO:0043254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 12","termid":"PBO:0043254"}


id: PBO:0089019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup132","termid":"PBO:0089019"}


id: PBO:0030345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030345"}


id: PBO:0050712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPB1 associated protein 1","termid":"PBO:0050712"}


id: FYECO:0000167
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which SDS (sodium dodecyl sulfate) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ SDS","synonyms":[{"name":"sodium dodecyl sulfate added","type":"exact"}],"termid":"FYECO:0000167"}


id: PBO:0028931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_non-growing_cell_tip","termid":"PBO:0028931"}


id: MOD:01876
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(12)C labeled succinyl group.","definition_xrefs":["PubMed:12175151","PubMed:11857757","Unimod:64","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(1)H,4x(12)C-labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, light form (+4amu, 4H2) site N-term","type":"related"},{"name":"Succinyl","type":"related"}],"termid":"MOD:01876"}


id: PBO:0077844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 3","termid":"PBO:0077844"}


id: GO:0060323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the head are generated and organized. The head is the anterior-most division of the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"body morphogenesis","termid":"GO:0010171"},{"relation_name":"part_of","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head morphogenesis","termid":"GO:0060323"}


id: MONDO:0017542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central polydactyly of toes, bilateral (obsolete MONDO:0017542)","secondary_identifiers":["Orphanet:295185"],"synonyms":[{"name":"mesoaxial polydactyly of toes, bilateral","type":"exact"},{"name":"mirror foot, bilateral","type":"exact"}],"termid":"MONDO:0017542","xrefs":{"Monarch":{"xref_id":"0017542"}}}


id: PBO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr1 (predicted)","termid":"PBO:0004155"}


id: PBO:0057227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 382","termid":"PBO:0057227"}


id: PBO:0062428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 89 pseudogene","termid":"PBO:0062428"}


id: MONDO:0013578
data:
  {"annotated_genes":["SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86275],"is_not":false,"summary":null,"term":"MONDO:0013578"}]},"cv_name":"mondo","definition":"An autosomal dominant non-syndromic intellectual disability that has material basis in an autosomal dominant mutation of DYRK1A on chromosome 21q22.13.","definition_xrefs":["DOID:0070037"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"DYRK1A-related intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1799566","OMIM:614104","Orphanet:464306","UMLS:C5568143","GARD:13527"],"synonyms":[{"name":"MRD7","type":"exact"},{"name":"autosomal dominant intellectual disability 7","type":"exact"},{"name":"autosomal dominant mental retardation 7","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 7","type":"related"},{"name":"intellectual disability, autosomal dominant 7","type":"related"},{"name":"intellectual disability, autosomal dominant type 7","type":"exact"},{"name":"mental retardation, autosomal dominant 7","type":"related"},{"name":"mental retardation, autosomal dominant type 7","type":"exact"}],"termid":"MONDO:0013578","terms_by_termid":{"MONDO:0013578":null},"xrefs":{"Monarch":{"xref_id":"0013578"}}}


id: GO:1905475
data:
  {"annotated_genes":["SJAG_03970","SJAG_04597","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[94746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[96187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to membrane.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:26911690","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein localisation in membrane","type":"exact"},{"name":"regulation of protein localization in membrane","type":"exact"}],"termid":"GO:1905475","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: PBO:0049327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIE subunit 1","termid":"PBO:0049327"}


id: MONDO:0000609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sideroblastic anemia with spinocerebellar ataxia (obsolete MONDO:0000609)","termid":"MONDO:0000609","xrefs":{"Monarch":{"xref_id":"0000609"}}}


id: PBO:0050033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 1","termid":"PBO:0050033"}


id: PBO:0072980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 3A member 1","termid":"PBO:0072980"}


id: PBO:0066456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 9, pseudogene","termid":"PBO:0066456"}


id: MONDO:0017478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelia of upper limb","termid":"MONDO:0017437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"amelia of upper limb, unilateral","secondary_identifiers":["icd11.foundation:790781203","Orphanet:295053"],"termid":"MONDO:0017478","xrefs":{"Monarch":{"xref_id":"0017478"}}}


id: MONDO:1011648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial thoracic aortic aneurysm, non-human animal","secondary_identifiers":["OMIA:001419"],"termid":"MONDO:1011648","xrefs":{"Monarch":{"xref_id":"1011648"}}}


id: GO:0018265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-asparagine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a asparaginyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0158"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-asparaginyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018265)","termid":"GO:0018265"}


id: PBO:0091023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type homeobox protein Pi","termid":"PBO:0091023"}


id: PBO:0028132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_cytoskeleton_morphology_during_vegetative_growth","termid":"PBO:0028132"}


id: MOD:00462
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to L-kynurenine.","definition_xrefs":["DeltaMass:357","PubMed:11029593","OMSSA:66","PubMed:9252331","Unimod:351#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-kynurenine","synonyms":[{"name":"(2S)-2-amino-4-(2-aminophenyl)-4-oxo-butanoic acid","type":"exact"},{"name":"Trp->Kynurenin","type":"related"},{"name":"kynureninw","type":"exact"},{"name":"tryptophan oxidation to kynurenin","type":"related"}],"termid":"MOD:00462"}


id: MONDO:0000873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma composed of immature small to medium-sized precursor lymphoid cells (lymphoblasts). It includes the B- and T-cell lymphoblastic lymphoma.","definition_xrefs":["NCIT:C9360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoblastic lymphoma","secondary_identifiers":["ICDO:9727/3","ICD9:202.80","MEDGEN:42541","SCTID:109965004","GARD:3329","UMLS:C0079748","DOID:0080147"],"synonyms":[{"name":"lymphoblastic lymphoma","type":"exact"},{"name":"lymphoma, lymphoblastic","type":"related"},{"name":"lymphoma, lymphoblastic, malignant","type":"exact"},{"name":"precursor cell lymphoblastic lymphoma","type":"exact"},{"name":"precursor lymphoblastic lymphoma","type":"exact"}],"termid":"MONDO:0000873","xrefs":{"Monarch":{"xref_id":"0000873"}}}


id: GO:0102995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: columbianetin + NADPH + O2 + H+ = angelicin + acetone + NADP + 2 H2O.","definition_xrefs":["EC:1.14.14.148","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"angelicin synthase activity","secondary_identifiers":["RHEA:27481","MetaCyc:RXN-9689"],"termid":"GO:0102995"}


id: FYPO:0000015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a daughter cell begins to grow from the lateral portion of the long axis of the cell, and at an angle to the septum or cell division site of the mother cell, resulting in the formation of a single cell that has a branch.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"branched vegetative cell","synonyms":[{"name":"branched cell","type":"exact"},{"name":"branched cell during vegetative growth","type":"exact"},{"name":"branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"cell morphology, branched","type":"exact"}],"termid":"FYPO:0000015"}


id: PBO:0069854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1140, pseudogene","termid":"PBO:0069854"}


id: GO:0051985
data:
  {"annotated_genes":["SJAG_02451","SJAG_03126","SJAG_01082","SJAG_03327","SJAG_01515","SJAG_01837","SJAG_03681","SJAG_04126","SJAG_00883","SJAG_01297","SJAG_04699","SJAG_01679","SJAG_04999","SJAG_04259","SJAG_04884","SJAG_01330","SJAG_03353","SJAG_03048","SJAG_00460","SJAG_02169","SJAG_02336"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91062,108567,104210,114085,112267,99914,107546,114572,116200],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[106636,114799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[116966,75747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[115857,99758,106638,102116,110216,114802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[102678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[99019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[103595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[94537],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[114090],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[116973],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[101658],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"negatively_regulates","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of chromosome segregation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome segregation","type":"exact"},{"name":"down-regulation of chromosome segregation","type":"exact"},{"name":"downregulation of chromosome segregation","type":"exact"},{"name":"inhibition of chromosome segregation","type":"narrow"}],"termid":"GO:0051985","terms_by_termid":{"GO:0007094":null,"GO:0033316":null,"GO:0090267":null,"GO:0140499":null,"GO:1902103":null,"GO:1902424":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:2000816":null}}


id: MOD:01223
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["OMSSA:41","PubMed:11710128","Unimod:126#N-term","PubMed:3155470","PubMed:957432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-sulfanylpropanoyl (N-term and Lys)","termid":"MOD:00497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioacylation of primary amines - site N-term","synonyms":[{"name":"3,3-Dithio-bis-(sulfosuccinimidyl)propionate","type":"related"},{"name":"Thioacyl","type":"related"},{"name":"ntermpeptioacetyl","type":"exact"},{"name":"thioacylation of primary amines (N-term and Lys)","type":"related"}],"termid":"MOD:01223"}


id: GO:0044204
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dynamic, proteinaceous framework within the nucleus of host eukaryotic cells, composed of proteins and RNA, that provides structural support for chromatin organization, gene regulation, and nuclear processes.","definition_xrefs":["GOC:jl","GOC:rynl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear matrix","termid":"GO:0044204"}


id: PBO:0063045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin","termid":"PBO:0063045"}


id: GO:1903728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a luteal cell. Large luteal cells develop from granulosa cells. Small luteal cells develop from theca cells.","definition_xrefs":["MP:0001133","GO_REF:0000086","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteal cell differentiation","synonyms":[{"name":"lutein cell differentiation","type":"exact"}],"termid":"GO:1903728"}


id: GO:1903380
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102696,116974],"is_not":false,"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic chromosome condensation.","definition_xrefs":["PMID:9490640","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of mitotic chromosome condensation","termid":"GO:1903379"},{"relation_name":"is_a","term_name":"positive regulation of chromosome condensation","termid":"GO:1905821"},{"relation_name":"positively_regulates","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic chromosome condensation","type":"narrow"},{"name":"up regulation of mitotic chromosome condensation","type":"exact"},{"name":"up-regulation of mitotic chromosome condensation","type":"exact"},{"name":"upregulation of mitotic chromosome condensation","type":"exact"}],"termid":"GO:1903380","terms_by_termid":{"GO:1903380":null}}


id: GO:0046598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the introduction of viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral entry into host cell","termid":"GO:0046596"},{"relation_name":"is_a","term_name":"positive regulation by symbiont of entry into host","termid":"GO:0075294"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral entry into host cell","synonyms":[{"name":"positive regulation of viral penetration into host cell","type":"exact"}],"termid":"GO:0046598"}


id: PBO:0068529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 130, pseudogene","termid":"PBO:0068529"}


id: PBO:0040184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic peptidase retroviral like 1","termid":"PBO:0040184"}


id: GO:0031102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neuronal processes such as axons or dendrites in response to their loss or damage.","definition_xrefs":["GOC:tb","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection regeneration","synonyms":[{"name":"neurite regeneration","type":"narrow"}],"termid":"GO:0031102"}


id: GO:0032630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-26 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-26 production","secondary_identifiers":["GO:0045526","GO:0072624"],"synonyms":[{"name":"AK155 secretion","type":"narrow"},{"name":"IL-26 production","type":"exact"},{"name":"interleukin-26 anabolism","type":"narrow"},{"name":"interleukin-26 biosynthesis","type":"narrow"},{"name":"interleukin-26 biosynthetic process","type":"narrow"},{"name":"interleukin-26 formation","type":"narrow"},{"name":"interleukin-26 secretion","type":"narrow"},{"name":"interleukin-26 synthesis","type":"narrow"}],"termid":"GO:0032630"}


id: GO:0033099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded extension of the cell, originally characterized in Mycoplasma species, that contains an electron-dense core that is part of the cytoskeleton and is oriented lengthwise and ends distally in a bulbous knob (terminal button). Required for adherence to host cells and involved in gliding motility and cell division.","definition_xrefs":["PMID:11325545","PMID:12003948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"attachment organelle","termid":"GO:0033099"}


id: RO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_preceded_by","termid":"RO:0002087"},{"relation_name":"is_a","term_name":"causally_downstream_of","termid":"RO:0002404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_downstream_of","termid":"RO:0002405"}


id: GO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the phloem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via phloem (obsolete GO:0023068)","synonyms":[{"name":"signal transmission via phloem","type":"exact"}],"termid":"GO:0023068"}


id: MONDO:1012633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual differentiation that occurs in dogs and is characterized by the presence of testicular tissue in the gonads and varying degrees of phenotypic masculinization with a female karyotype (XX) and absence of both the SRY gene and the Y chromosome.","definition_xrefs":["OMIA:000901-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XX difference of sexual development, dog","synonyms":[{"name":"XX DSD testicular/ovotesticular, dog","type":"related"},{"name":"XX sex reversal, dog","type":"related"},{"name":"XXSR","type":"exact"}],"termid":"MONDO:1012633","xrefs":{"Monarch":{"xref_id":"1012633"}}}


id: GO:1990181
data:
  {"annotated_genes":["SJAG_01139"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117347],"is_not":false,"summary":null,"term":"GO:1990181"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA from pantothenate via phosphopantothenate and CoA.","definition_xrefs":["PMID:23091701","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA biosynthetic process","termid":"GO:0006085"},{"relation_name":"is_a","term_name":"pantothenate metabolic process","termid":"GO:0015939"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01139":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0006790","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"acetyl-CoA biosynthetic process from pantothenate","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetyl-CoA anabolism from pantothenate","type":"exact"},{"name":"acetyl-CoA formation from pantothenate","type":"related"},{"name":"acetyl-CoA synthesis from pantothenate","type":"related"}],"termid":"GO:1990181","terms_by_termid":{"GO:1990181":null}}


id: MONDO:1012618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disorder that occurs in cats due to a mutation in the IDUA gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis I, domestic cat","secondary_identifiers":["OMIA:000664-9685"],"synonyms":[{"name":"Hurler syndrome, domestic cat","type":"related"},{"name":"MPS I","type":"exact"}],"termid":"MONDO:1012618","xrefs":{"Monarch":{"xref_id":"1012618"}}}


id: PR:Q02099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase ATR that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02635","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase rad3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.05","secondary_identifiers":["UniProtKB:Q02099"],"synonyms":[{"name":"DNA repair protein rad3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATR","type":"exact"}],"termid":"PR:Q02099"}


id: SO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_isopentenyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_isopentenyladenosine","secondary_identifiers":["RNAMOD:006"],"synonyms":[{"name":"N6 isopentenyladenosine","type":"exact"},{"name":"N6-isopentenyladenosine","type":"exact"},{"name":"i6A","type":"exact"}],"termid":"SO:0001300"}


id: GO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic cleavage of transmembrane proteins and release of their ectodomain that occurs after induction by phorbol-12-myristate-13-acetate (PMA), a protein kinase C agonist.","definition_xrefs":["PMID:12714508"],"gene_count":0,"genotype_count":0,"name":"obsolete PMA-inducible membrane protein ectodomain proteolysis (obsolete GO:0051088)","termid":"GO:0051088"}


id: PBO:0071243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 84","termid":"PBO:0071243"}


id: GO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["ISBN:0781735149","PMID:12789499","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in defense response","termid":"GO:0002679"}


id: PR:Q10141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mms1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.05c","synonyms":[{"name":"Spom972h-mms1","type":"exact"}],"termid":"PR:Q10141"}


id: PBO:0063419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE3A antisense RNA 1","termid":"PBO:0063419"}


id: GO:1904686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle disassembly.","definition_xrefs":["PMID:25963819","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle organization","termid":"GO:0060236"},{"relation_name":"regulates","term_name":"mitotic spindle disassembly","termid":"GO:0051228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic spindle disassembly","synonyms":[{"name":"regulation of mitotic spindle breakdown","type":"exact"},{"name":"regulation of mitotic spindle catabolism","type":"exact"},{"name":"regulation of mitotic spindle degradation","type":"exact"},{"name":"regulation of spindle breakdown during mitosis","type":"exact"},{"name":"regulation of spindle degradation during mitosis","type":"exact"},{"name":"regulation of spindle disassembly during mitosis","type":"exact"}],"termid":"GO:1904686"}


id: GO:0007619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism for the purpose of attracting sexual partners.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"courtship behavior","synonyms":[{"name":"courtship behaviour","type":"exact"}],"termid":"GO:0007619"}


id: GO:0070095
data:
  {"annotated_genes":["SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78209],"is_not":false,"summary":null,"term":"GO:0070095"}]},"cv_name":"molecular_function","definition":"Binding to fructose 6-phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00605":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fructose-6-phosphate binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-fructose 6-phosphate binding","type":"narrow"},{"name":"fructose 6-phosphate binding","type":"exact"}],"termid":"GO:0070095","terms_by_termid":{"GO:0070095":null}}


id: MONDO:0007443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital unilateral hypoplasia of depressor anguli oris is a congenital anomaly, characterized by the unilateral hypoplasia/agenesis of the depressor anguli oris muscle, resulting in an asymmetric crying facies in neonatal period/ infancy (drooping of one corner of the mouth during crying) while eye closure, nasolabial fold and forehead wrinkling are symmetric. While it can be isolated, this anomaly is also seen in 22q11.2 deletion syndrome and can be accompanied by other major congenital anomalies of the cardiovascular system, as well as less frequently the musculoskeletal, cervicofacial, respiratory, genitourinary, and, rarely, endocrine systems. When isolated, the condition is cosmetically insignificant as the infant gets older (as the muscle does not contribute significantly to facial expression in childhood/ adulthood).","definition_xrefs":["Orphanet:1166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"congenital unilateral hypoplasia of depressor anguli oris","secondary_identifiers":["OMIM:125520","GARD:16557","MEDGEN:140911","SCTID:51409009","ICD9:759.89","UMLS:C0431406"],"synonyms":[{"name":"Cayler cardiofacial syndrome","type":"related"},{"name":"asymmetric crying facies","type":"related"},{"name":"depressor anguli oris muscle, hypoplasia of","type":"related"},{"name":"facial paresis, partial, unilateral","type":"related"},{"name":"isolated asymmetric crying facies","type":"exact"}],"termid":"MONDO:0007443","xrefs":{"Monarch":{"xref_id":"0007443"}}}


id: PBO:0114111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REX family exonuclease, implicated in rDNA metabolism or ribosome biogenesis, potential human ISG20L2 ortholog","termid":"PBO:0114111"}


id: PBO:0056816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 9","termid":"PBO:0056816"}


id: GO:0010695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["GOC:tb","PMID:18500339","GOC:dph","PMID:16792804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic spindle pole body separation","synonyms":[{"name":"regulation of SPB separation","type":"exact"}],"termid":"GO:0010695"}


id: FYPO:0006140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-eicosenoylglycerophosphocholine (20:1n9) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:28667014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level","synonyms":[{"name":"increased 1-eicosenoylglycerophosphocholine (20:1n9) accumulation","type":"related"},{"name":"increased cellular 1-(11Z)-icosenoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006140"}


id: PBO:0038767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 5","termid":"PBO:0038767"}


id: PBO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 1","termid":"PBO:0047556"}


id: PBO:0028306
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitotic_S_phase","termid":"PBO:0028306"}


id: GO:0006789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of bilirubin monoglucuronide or bilirubin diglucuronide, water-soluble derivatives of bilirubin.","definition_xrefs":["DOI:10.1016/0305-0491(80)90243-6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"bilirubin conjugation","termid":"GO:0006789"}


id: MONDO:0018296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with developmental anomaly (obsolete MONDO:0018296)","secondary_identifiers":["Orphanet:371235"],"synonyms":[{"name":"CDG with developmental anomaly","type":"exact"}],"termid":"MONDO:0018296","xrefs":{"Monarch":{"xref_id":"0018296"}}}


id: FYPO:0006424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids does not occur in centromeric regions during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"abolished meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"abolished meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"abolished meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"abolished sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"meiotic sister chromatid cohesion abolished at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0006424"}


id: PBO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 5, endonuclease","termid":"PBO:0046480"}


id: MONDO:0010846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary multiple osteochondromas","termid":"MONDO:0005508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostoses, multiple, type III","secondary_identifiers":["MESH:C563975","MEDGEN:333090","GARD:2206","UMLS:C1838420","OMIM:600209"],"synonyms":[{"name":"EXT3","type":"exact"},{"name":"exostoses, multiple, type 3","type":"related"},{"name":"exostoses, multiple, type III","type":"exact"}],"termid":"MONDO:0010846","xrefs":{"Monarch":{"xref_id":"0010846"}}}


id: MONDO:0009026
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85543],"is_not":false,"summary":null,"term":"MONDO:0009026"}]},"cv_name":"mondo","definition":"Costello syndrome (CS) is a rare multisystemic disorder characterized by failure to thrive, short stature, developmental delay or intellectual disability, joint laxity, soft skin, and distinctive facial features. Cardiac and neurological involvement is common and there is an increased lifetime risk of certain tumors.","definition_xrefs":["Orphanet:3071"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dermis elastic tissue disorder (obsolete MONDO:0019292)","termid":"MONDO:0019292"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Noonan syndrome and Noonan-related syndrome","termid":"MONDO:0020297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"Costello syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D056685","MedDRA:10067380","OMIM:218040","DOID:0050469","UMLS:C0587248","NANDO:2200971","icd11.foundation:1946512039","NANDO:1200463","NCIT:C84652","GARD:1550","NORD:1011","SCTID:309776008","MEDGEN:108454","ICD9:799.89"],"synonyms":[{"name":"CSTLO","type":"related"},{"name":"Costello syndrome","type":"exact"},{"name":"FCS syndrome","type":"exact"},{"name":"congenital myopathy with excess of muscle spindles","type":"exact"},{"name":"faciocutaneoskeletal syndrome","type":"exact"},{"name":"myopathy, congenital, with excess of muscle spindles","type":"related"}],"termid":"MONDO:0009026","terms_by_termid":{"MONDO:0009026":null},"xrefs":{"Monarch":{"xref_id":"0009026"}}}


id: PATO:0000127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000127 relative mass (obsolete PATO:0000127)","termid":"PATO:0000127"}


id: PR:Q1K9C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir1 gene.","definition_xrefs":["UniProtKB:Q1K9C2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.01c","synonyms":[{"name":"Spom972h-sir1","type":"exact"}],"termid":"PR:Q1K9C2"}


id: PBO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 5","termid":"PBO:0039587"}


id: PBO:0066232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM39 pseudogene 1","termid":"PBO:0066232"}


id: GO:0075286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangiospore formation","termid":"GO:0075286"}


id: GO:0033329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving O-glucosylated derivatives of kaempferol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone metabolic process","termid":"GO:0051552"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kaempferol O-glucoside metabolic process","synonyms":[{"name":"kaempferol O-glucoside metabolism","type":"exact"}],"termid":"GO:0033329"}


id: CHEBI:48080
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brefeldin A","termid":"CHEBI:48080"}


id: GO:0007420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid","UBERON:0000955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"head development","termid":"GO:0060322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain development","termid":"GO:0007420"}


id: GO:0044612
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103311],"is_not":false,"summary":null,"term":"GO:0044612"}]},"cv_name":"cellular_component","definition":"A substructure of the nuclear pore complex (NPC) that serves to connect members of the central transport channel (composed of FG-nucleoporins) to the core scaffold (composed of the inner and outer NPC rings). In S. cerevisiae, the linkers are Nic96p and Nup82p. In vertebrates, they are Nup93 and Nup88. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. Both linkers can be isolated in association with specific FG-nucleoporins, complexes that are sometimes referred to as the Nic96 complex (Nic96p-Nsp1p-Nup49p-Nup57p) and the Nup82 complex (Nup82p-Nup116p-Nup159p-Gle2p).","definition_xrefs":["PMID:18046406","PMID:19524430","GOC:dgf","PMID:20947011","PMID:22419078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005643","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear pore linkers","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nic96 complex","type":"related"},{"name":"Nup82 complex","type":"related"}],"termid":"GO:0044612","terms_by_termid":{"GO:0044612":null}}


id: GO:1904905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endothelial cell-matrix adhesion via fibronectin.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:19460962","GO_REF:0000058","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of endothelial cell-matrix adhesion via fibronectin","termid":"GO:1904904"},{"relation_name":"negatively_regulates","term_name":"endothelial cell-matrix adhesion via fibronectin","termid":"GO:0090674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of endothelial cell-matrix adhesion via fibronectin","synonyms":[{"name":"down regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"down-regulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"downregulation of endothelial cell-matrix adhesion via fibronectin","type":"exact"},{"name":"inhibition of endothelial cell-matrix adhesion via fibronectin","type":"narrow"}],"termid":"GO:1904905"}


id: PBO:0084739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; involved in phospholipid metabolism; forms complex with Mdm35p that transfers phosphatidylserine from outer membrane to inner membrane for phosphatidylethanolamine synthesis; null mutant has defects in mitochondrial morphology; similar to Ups1p, Ups3p and to human PRELI; UPS2 has a paralog, UPS3, that arose from the whole genome duplication","termid":"PBO:0084739"}


id: GO:0033422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"CCC codon-amino acid adaptor activity","synonyms":[{"name":"proline tRNA","type":"related"}],"termid":"GO:0033422"}


id: PBO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 7","termid":"PBO:0052494"}


id: MONDO:0012230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 10","secondary_identifiers":["MEDGEN:373104","OMIM:609259","UMLS:C1836503","MESH:C563758"],"synonyms":[{"name":"MYP10","type":"exact"},{"name":"myopia 10","type":"exact"}],"termid":"MONDO:0012230","xrefs":{"Monarch":{"xref_id":"0012230"}}}


id: PBO:0046318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1","termid":"PBO:0046318"}


id: PR:Q9USZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USZ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein end3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.02c","synonyms":[{"name":"Spom972h-end3","type":"exact"},{"name":"endocytosis protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ7"}


id: PBO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule-based_movement","termid":"PBO:0035886"}


id: PBO:0060958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB inhibitor epsilon","termid":"PBO:0060958"}


id: PBO:0059580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1 family member 2","termid":"PBO:0059580"}


id: GO:0042858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderophore chrysobactin (alpha-N-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine).","definition_xrefs":["GOC:jl","PMID:8837459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound biosynthetic process","termid":"GO:0009713"},{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"chrysobactin metabolic process","termid":"GO:0042857"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"chrysobactin biosynthetic process","secondary_identifiers":["GO:0031183","GO:0031184"],"synonyms":[{"name":"chrysobactin anabolism","type":"exact"},{"name":"chrysobactin biosynthesis","type":"exact"},{"name":"chrysobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"chrysobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"chrysobactin formation","type":"exact"},{"name":"chrysobactin synthesis","type":"exact"}],"termid":"GO:0042858"}


id: PBO:0074421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 20","termid":"PBO:0074421"}


id: GO:0043684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins related to those involved in bacterial DNA conjugative transfer, that permits the transfer of DNA or proteins into the extracellular milieu or directly into host cells. In general the type IV complex forms a multisubunit cell-envelope-spanning structure composed of a secretion channel and often a pilus or other surface filament or protein(s).","definition_xrefs":["GOC:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"type IV secretion system complex","synonyms":[{"name":"T4SS complex","type":"exact"},{"name":"type IV protein secretion system complex","type":"narrow"}],"termid":"GO:0043684"}


id: MONDO:0018316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"fatal post-viral neurodegenerative disorder","secondary_identifiers":["MEDGEN:1657472","Orphanet:391343","UMLS:C4751597","GARD:21620"],"termid":"MONDO:0018316","xrefs":{"Monarch":{"xref_id":"0018316"}}}


id: PBO:0072099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 30","termid":"PBO:0072099"}


id: PBO:0059716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 24","termid":"PBO:0059716"}


id: PBO:0017948
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SEC12","termid":"PBO:0017948"}


id: MONDO:0015778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hypothyroidism that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic hypothyroidism (obsolete MONDO:0015778)","secondary_identifiers":["Orphanet:177107"],"synonyms":[{"name":"syndrome associated with hypothyroidism","type":"exact"},{"name":"syndromic hypothyroidism","type":"exact"}],"termid":"MONDO:0015778","xrefs":{"Monarch":{"xref_id":"0015778"}}}


id: MONDO:0006282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the endothelial cells of the lymphatic vessels.","definition_xrefs":["NCIT:C3205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphangiosarcoma","secondary_identifiers":["DOID:2689","EFO:1000339","SCTID:403986008","ICDO:9170/3","MEDGEN:6154","ICD9:171.9","MESH:D008204","UMLS:C0024224"],"synonyms":[{"name":"Stewart-Treves syndrome","type":"exact"},{"name":"lymphangioendothelial sarcoma","type":"exact"},{"name":"lymphangiosarcoma","type":"exact"},{"name":"lymphangiosarcoma of Stewart and Treves","type":"related"},{"name":"lymphangiosarcoma, malignant","type":"exact"},{"name":"malignant lymphangioendothelioma","type":"exact"}],"termid":"MONDO:0006282","xrefs":{"Monarch":{"xref_id":"0006282"}}}


id: PBO:0067426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 545, pseudogene","termid":"PBO:0067426"}


id: MONDO:0018476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined dystonia","termid":"MONDO:0020065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia-aphonia syndrome","secondary_identifiers":["Orphanet:412217","UMLS:C5190573","GARD:21739","MEDGEN:1675660"],"termid":"MONDO:0018476","xrefs":{"Monarch":{"xref_id":"0018476"}}}


id: PBO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase (predicted)","termid":"PBO:0001790"}


id: FYPO:0001590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during vegetative growth","termid":"FYPO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased lysine import during vegetative growth","synonyms":[{"name":"decreased L-lysine import across plasma membrane during vegetative growth","type":"exact"},{"name":"decreased L-lysine import during vegetative growth","type":"exact"},{"name":"decreased lysine import during mitotic cell cycle","type":"related"},{"name":"decreased lysine import into cell during vegetative growth","type":"exact"},{"name":"decreased lysine uptake during vegetative growth","type":"exact"},{"name":"reduced lysine import during vegetative growth","type":"exact"}],"termid":"FYPO:0001590"}


id: MONDO:0005274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005274 (obsolete MONDO:0005274)","termid":"MONDO:0005274","xrefs":{"Monarch":{"xref_id":"0005274"}}}


id: GO:0043295
data:
  {"annotated_genes":["SJAG_01351","SJAG_05181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70812,99600],"is_not":false,"summary":null,"term":"GO:0043295"}]},"cv_name":"molecular_function","definition":"Binding to glutathione; a tripeptide composed of the three amino acids cysteine, glutamic acid and glycine.","definition_xrefs":["GOC:bf","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"},{"relation_name":"is_a","term_name":"oligopeptide binding","termid":"GO:1900750"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01351":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glutathione binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043295","terms_by_termid":{"GO:0043295":null}}


id: GO:0021848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the subpallium area of the forebrain. The interneuron precursors that these cells give rise to include GABAergic interneurons and will migrate tangentially.","definition_xrefs":["GOC:jid","PMID:12626695","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in subpallium","synonyms":[{"name":"neuroblast division in the ventral telencephalon","type":"exact"}],"termid":"GO:0021848"}


id: PBO:0040084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D pseudogene 1","termid":"PBO:0040084"}


id: MONDO:0015042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"plasmacytoma","termid":"MONDO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"primary plasmacytoma of the bone","secondary_identifiers":["GARD:19739","Orphanet:100021"],"termid":"MONDO:0015042","xrefs":{"Monarch":{"xref_id":"0015042"}}}


id: FYECO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with an exclusively organic nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, organic nitrogen source, no inorganic nitrogen","termid":"FYECO:0000264"}


id: MONDO:0014833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart and brain malformation syndrome","secondary_identifiers":["MEDGEN:934760","OMIM:616920","UMLS:C4310793"],"synonyms":[{"name":"HBMS","type":"exact"},{"name":"heart and brain malformation syndrome","type":"exact"},{"name":"heart and brain malformation syndrome; HBMS","type":"exact"}],"termid":"MONDO:0014833","xrefs":{"Monarch":{"xref_id":"0014833"}}}


id: PBO:0114286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mon1-Ccz1 GEF complex subunit Ccz1","termid":"PBO:0114286"}


id: GO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Female behaviors associated with the care and rearing of offspring.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal behavior","synonyms":[{"name":"maternal behaviour","type":"exact"}],"termid":"GO:0042711"}


id: PBO:0005611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoprotein (RNP) complex (predicted)","termid":"PBO:0005611"}


id: PBO:0063232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 18","termid":"PBO:0063232"}


id: PR:Q53EK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A non-structural maintenance of chromosomes element 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04590","PANTHER:PTHR20973:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-structural maintenance of chromosomes element 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.05","secondary_identifiers":["UniProtKB:Q53EK2"],"synonyms":[{"name":"Spom972h-NSMCE1","type":"exact"},{"name":"non-SMC element 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q53EK2"}


id: GO:0060779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secondary leaflet attains its shape. A secondary leaflet develops by branching or division of a primary leaflet.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary leaflet morphogenesis","termid":"GO:0060779"}


id: GO:0080037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["PMID:14973166","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of cytokinin-activated signaling pathway","termid":"GO:0080036"},{"relation_name":"negatively_regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"negative regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"negative regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080037"}


id: PBO:0041506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 28","termid":"PBO:0041506"}


id: GO:0004506
data:
  {"annotated_genes":["SJAG_00370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77565],"is_not":false,"summary":null,"term":"GO:0004506"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + squalene = (S)-2,3-epoxysqualene + H2O + NADP+.","definition_xrefs":["RHEA:25282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"squalene monooxygenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02874","MetaCyc:SQUALENE-MONOOXYGENASE-RXN","Reactome:R-HSA-191299","EC:1.14.14.17"],"synonyms":[{"name":"squalene 2,3-oxidocyclase activity","type":"related"},{"name":"squalene epoxidase activity","type":"related"},{"name":"squalene hydroxylase activity","type":"related"},{"name":"squalene oxydocyclase activity","type":"related"},{"name":"squalene,NADPH:oxygen oxidoreductase (2,3-epoxidizing) activity","type":"exact"},{"name":"squalene-2,3-epoxidase activity","type":"related"},{"name":"squalene-2,3-epoxide cyclase activity","type":"related"}],"termid":"GO:0004506","terms_by_termid":{"GO:0004506":null}}


id: MONDO:0000507
data:
  {"annotated_genes":["SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008178"}]},"cv_name":"mondo","definition":"Inclusion body myopathy with Paget disease of bone and frontotemporal dementia (IBMPFD) is a multisystem degenerative genetic disorder characterized by adult-onset proximal and distal muscle weakness (clinically resembling limb-girdle muscular dystrophy); early-onset Paget disease of bone, manifesting with bone pain, deformity and enlargement of the long-bones; and premature frontotemporal dementia, manifesting first with dysnomia, dyscalculia and comprehension deficits followed by progressive aphasia, alexia, and agraphia. As the disease progresses, muscle weakness begins to affect the other limbs and respiratory muscles, ultimately resulting in respiratory or cardiac failure.","definition_xrefs":["Orphanet:52430"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"},{"relation_name":"is_a","term_name":"frontotemporal dementia","termid":"MONDO:0017276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:322251","OMIMPS:167320","GARD:10899","SCTID:703544004","UMLS:C1833662","icd11.foundation:1947548457","DOID:0050881"],"synonyms":[{"name":"IBMPFD","type":"exact"},{"name":"inclusion body myopathy with Paget's disease of bone and frontotemporal dementia","type":"exact"},{"name":"inclusion body myopathy with early-onset Paget disease and frontotemporal dementia","type":"related"},{"name":"inclusion body myopathy with early-onset Paget disease with or without frontotemporal dementia","type":"exact"},{"name":"inclusion body myopathy/Paget disease/frontotemporal dementia","type":"exact"},{"name":"limb-girdle muscular dystrophy with Paget disease of bone","type":"exact"},{"name":"pagetoid amyotrophic lateral sclerosis","type":"exact"},{"name":"pagetoid neuroskeletal syndrome","type":"exact"}],"termid":"MONDO:0000507","terms_by_termid":{"MONDO:0008178":null},"xrefs":{"Monarch":{"xref_id":"0000507"}}}


id: PBO:0046641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 22","termid":"PBO:0046641"}


id: GO:0033073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["GOC:mah","PMID:12623076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"pinene metabolic process","synonyms":[{"name":"pinene metabolism","type":"exact"}],"termid":"GO:0033073"}


id: MONDO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with perivascular epithelioid cell differentiation often associated with tuberous sclerosis. It is characterized by a mixture of epithelioid cells, smooth muscle, vessels, and mature adipose tissue. The kidney is the most common site of involvement. Other sites of involvement include the liver, lung, lymph nodes, and retroperitoneum. The vast majority of cases follow a benign clinical course. However, cases of metastatic angiomyolipomas with sarcomatoid features have been described.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiomyolipoma","secondary_identifiers":["GARD:12024","MEDGEN:64622","MESH:D018207","NCIT:C3734","UMLS:C0206633","ICDO:8860/0","DOID:3314"],"synonyms":[{"name":"angiomyolipoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002603","xrefs":{"Monarch":{"xref_id":"0002603"}}}


id: PBO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 45","termid":"PBO:0071626"}


id: PBO:0004050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Sgf29","termid":"PBO:0004050"}


id: PBO:0053688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 881","termid":"PBO:0053688"}


id: PBO:0048545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial fibrillary acidic protein","termid":"PBO:0048545"}


id: PBO:0089463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan beta-glucosidase Bgl2","termid":"PBO:0089463"}


id: GO:0070154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling lysine to lysyl-tRNA in a mitochondrion, catalyzed by lysyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysyl-tRNA aminoacylation","termid":"GO:0006430"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0140053","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial lysyl-tRNA aminoacylation","termid":"GO:0070154"}


id: PBO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 31","termid":"PBO:0071308"}


id: GO:0140260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial proton-transporting ATP synthase complex.","definition_xrefs":["PMID:12110673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase complex binding","termid":"GO:0140260"}


id: GO:1903185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-dopa.","definition_xrefs":["GO_REF:0000068","PMID:8822146","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"L-dopa metabolic process","termid":"GO:1903184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-dopa biosynthetic process","synonyms":[{"name":"L-dopa anabolism","type":"exact"},{"name":"L-dopa biosynthesis","type":"exact"},{"name":"L-dopa formation","type":"exact"},{"name":"L-dopa synthesis","type":"exact"}],"termid":"GO:1903185"}


id: SO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This is used for non-spliced EST clusters that have polyA features. This category has been specifically created for the ENCODE project to highlight regions that could indicate the presence of protein coding genes that require experimental validation, either by 5' RACE or RT-PCR to extend the transcripts, or by confirming expression of the putatively-encoded peptide with specific antibodies.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"predicted_transcript","termid":"SO:0002138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconfirmed_transcript","synonyms":[{"name":"TEC","type":"exact"},{"name":"to_be_experimentally_confirmed_transcript","type":"exact"}],"termid":"SO:0002139"}


id: PBO:0073169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEH1 like nucleoporin","termid":"PBO:0073169"}


id: MONDO:0957832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniometadiaphyseal osteosclerosis with hip dysplasia","secondary_identifiers":["MEDGEN:1844026","OMIM:620558","UMLS:C5882710"],"termid":"MONDO:0957832","xrefs":{"Monarch":{"xref_id":"0957832"}}}


id: FYPO:0001051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. An inviable phenotype in which a cell undergoes mitotic catastrophe (i.e. enters mitosis prematurely and with defective chromosome segregation), entering mitosis when longer than wild type.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe, elongated cell (obsolete FYPO:0001051)","synonyms":[{"name":"mitotic catastrophe, elongated cell during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe, elongated cell during vegetative growth","type":"exact"},{"name":"mitotic catastrophe, long cell","type":"exact"}],"termid":"FYPO:0001051"}


id: PBO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_actin_filaments","termid":"PBO:0030016"}


id: MONDO:0006050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, aggressive, high grade invasive ductal carcinoma, not otherwise specified. It is characterized by the presence of pleomorphic and bizarre malignant cells that constitute more than 50 percent of the malignant cellular infiltrate.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic breast carcinoma","secondary_identifiers":["NCIT:C5161","EFO:1000047","MEDGEN:307976","UMLS:C1514169"],"synonyms":[{"name":"anaplastic breast carcinoma","type":"exact"}],"termid":"MONDO:0006050","xrefs":{"Monarch":{"xref_id":"0006050"}}}


id: PBO:0052605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kaptin, actin binding protein","termid":"PBO:0052605"}


id: PR:Q10301
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.08 gene.","definition_xrefs":["UniProtKB:Q10301","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0652 protein C22H10.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.08","synonyms":[{"name":"Spom972h-SPAC22H10.08","type":"exact"}],"termid":"PR:Q10301"}


id: GO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to cardiac glial cell fates and their capacity to differentiate into cardiac glial cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell fate commitment","termid":"GO:0060953"}


id: GO:0030743
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(1067) in 23S rRNA + S-adenosyl-L-methionine = 2'-O-methyladenosine(1067) in 23S rRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine) methyltransferase activity","termid":"GO:0016433"},{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"23S rRNA (adenosine(1067)-2'-O)-methyltransferase activity","secondary_identifiers":["RHEA:43212","MetaCyc:RXN-12464"],"synonyms":[{"name":"RNA-pentose methylase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (adenosine-2'-O)-methyltransferase activity","type":"related"},{"name":"rRNA adenosine 2'-methylase activity","type":"related"},{"name":"ribosomal ribonucleate adenosine 2'-methyltransferase activity","type":"related"},{"name":"thiostrepton-resistance methylase activity","type":"narrow"}],"termid":"GO:0030743"}


id: PBO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hamartin","termid":"PBO:0000526"}


id: GO:0100023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates meiotic nuclear division.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of meiotic nuclear division by transcription from RNA polymerase II promoter (obsolete GO:0100023)","termid":"GO:0100023"}


id: MONDO:0018724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005497","MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability-cerebellar hypoplasia-spondylo-epiphyseal dysplasia syndrome","secondary_identifiers":["Orphanet:459070","UMLS:C5687848","GARD:17815","MEDGEN:1811349"],"termid":"MONDO:0018724","xrefs":{"Monarch":{"xref_id":"0018724"}}}


id: PBO:0090453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup131","termid":"PBO:0090453"}


id: GO:1903624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2001740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA catabolic process","synonyms":[{"name":"regulation of DNA breakdown","type":"exact"},{"name":"regulation of DNA catabolism","type":"exact"},{"name":"regulation of DNA degradation","type":"exact"}],"termid":"GO:1903624"}


id: MONDO:0020304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isochromosomy Yp is a rare gonosome anomaly characterized by various clinical presentations including normal healthy fertile males, male phenotype with infertility, and males with ambiguous genitalia or incomplete masculinization.","definition_xrefs":["Orphanet:98797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isochromosome Y","termid":"MONDO:0019935"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isochromosomy Yp","secondary_identifiers":["SCTID:766708008","MEDGEN:1640451","UMLS:C4707793","GARD:19579"],"termid":"MONDO:0020304","xrefs":{"Monarch":{"xref_id":"0020304"}}}


id: PBO:0066209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 2","termid":"PBO:0066209"}


id: FYPO:0005772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at tRNA genes. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at tRNA genes during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation at transfer RNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005772"}


id: GO:0075195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of haustorium mother cell formation","termid":"GO:0075193"},{"relation_name":"negatively_regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of haustorium mother cell formation","synonyms":[{"name":"negative regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075195"}


id: PBO:0062950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1","termid":"PBO:0062950"}


id: PBO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase Dak2","termid":"PBO:0000112"}


id: GO:1905583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannose stimulus.","definition_xrefs":["PMID:16699509","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"},{"relation_name":"is_a","term_name":"response to mannose","termid":"GO:1905582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mannose","termid":"GO:1905583"}


id: GO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-phospho-D-glyceroyl phosphate = 2,3-bisphospho-D-glycerate.","definition_xrefs":["EC:5.4.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"bisphosphoglycerate mutase activity","secondary_identifiers":["Reactome:R-HSA-6798335","MetaCyc:BISPHOSPHOGLYCERATE-MUTASE-RXN","RHEA:17765"],"synonyms":[{"name":"2,3-bisphosphoglycerate mutase activity","type":"related"},{"name":"2,3-bisphosphoglycerate synthase activity","type":"related"},{"name":"2,3-diphosphoglycerate mutase activity","type":"related"},{"name":"2,3-diphosphoglycerate synthase activity","type":"related"},{"name":"2,3-diphosphoglyceromutase activity","type":"related"},{"name":"3-phospho-D-glycerate 1,2-phosphomutase activity","type":"related"},{"name":"BPGM activity","type":"related"},{"name":"DPGM","type":"related"},{"name":"biphosphoglycerate synthase activity","type":"related"},{"name":"bisphosphoglycerate synthase activity","type":"related"},{"name":"bisphosphoglyceromutase","type":"broad"},{"name":"diphosphoglycerate mutase activity","type":"related"},{"name":"diphosphoglyceric mutase activity","type":"related"},{"name":"diphosphoglyceromutase activity","type":"related"},{"name":"glycerate phosphomutase activity","type":"related"}],"termid":"GO:0004082"}


id: MONDO:1012751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe skeletal dysplasia characterized by shortened long bones, abnormal vertebrae, depressed nasal bridge, and cleft palate that occurs in pigs due to a mutation in the COL2A1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:32450343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, COL2A1-related, pig","secondary_identifiers":["OMIA:001926-9823"],"synonyms":[{"name":"achondrogenesis, type II in Sus scrofa (pig)","type":"related"}],"termid":"MONDO:1012751","xrefs":{"Monarch":{"xref_id":"1012751"}}}


id: GO:0032541
data:
  {"annotated_genes":["SJAG_00790","SJAG_04059","SJAG_00355","SJAG_03247","SJAG_01460","SJAG_00175","SJAG_03750","SJAG_00261","SJAG_03718","SJAG_01329","SJAG_03609","SJAG_04413","SJAG_01168","SJAG_00825","SJAG_04417","SJAG_02683","SJAG_04049","SJAG_03162","SJAG_02613","SJAG_03943","SJAG_01006","SJAG_01848","SJAG_03795","SJAG_03170","SJAG_01564","SJAG_02019","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70636,70762,72327,72783,73690,77303,88810,89104,91819,95656,96011,97784,103766,107703,109932,112364,114482,114703,117828,118972,119173,119241,119500,119501],"is_not":false,"summary":null,"term":"GO:0032541"},{"annotations":[93432],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099021"},{"annotations":[104686,90744],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160219"}]},"cv_name":"cellular_component","definition":"A cortical network of highly dynamic tubules that are juxtaposed to the plasma membrane and undergo ring closure and tubule-branching movements.","definition_xrefs":["GOC:se","PMID:17686782","PMID:10931860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum tubular network","termid":"GO:0071782"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00175":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00790":null,"SJAG_00825":null,"SJAG_01006":null,"SJAG_01168":null,"SJAG_01329":null,"SJAG_01460":null,"SJAG_01564":null,"SJAG_01848":null,"SJAG_02019":null,"SJAG_02613":null,"SJAG_02683":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03609":null,"SJAG_03718":null,"SJAG_03750":null,"SJAG_03795":null,"SJAG_03943":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783","GO:0005938"],"is_obsolete":false,"name":"cortical endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:33495454":null},"synonyms":[{"name":"ER-PM peripheral junction","type":"broad"},{"name":"cortical ER","type":"exact"},{"name":"peripheral ER","type":"related"},{"name":"peripheral endoplasmic reticulum","type":"related"}],"termid":"GO:0032541","terms_by_termid":{"GO:0032541":null,"GO:0099021":null,"GO:0160219":null}}


id: MONDO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Patau syndrome (obsolete MONDO:0001333)","termid":"MONDO:0001333","xrefs":{"Monarch":{"xref_id":"0001333"}}}


id: PBO:0039552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 46","termid":"PBO:0039552"}


id: PBO:0087786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfiredoxin; contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups in the peroxiredoxin Tsa1p, which is formed upon exposure to oxidants; conserved in higher eukaryotes; protein abundance increases in response to DNA replication stress","termid":"PBO:0087786"}


id: PBO:0040274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 8","termid":"PBO:0040274"}


id: MONDO:0011418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 3","secondary_identifiers":["UMLS:C1858662","MEDGEN:388113","OMIM:604254"],"synonyms":[{"name":"DYX3","type":"exact"},{"name":"dyslexia, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011418","xrefs":{"Monarch":{"xref_id":"0011418"}}}


id: PBO:0040517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axin 1","termid":"PBO:0040517"}


id: MONDO:0014539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the CRB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 9","secondary_identifiers":["UMLS:C4015555","DOID:0111134","GARD:16070","MEDGEN:863992","OMIM:616220"],"synonyms":[{"name":"CRB2 focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS9","type":"exact"},{"name":"focal segmental glomerulosclerosis 9","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in CRB2","type":"exact"},{"name":"focal segmental glomerulosclerosis type 9","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 9","type":"related"}],"termid":"MONDO:0014539","xrefs":{"Monarch":{"xref_id":"0014539"}}}


id: GO:0035496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + lipopolysaccharide = UDP + 1,5 alpha-D-galactosyl-lipopolysaccharide.","definition_xrefs":["PMID:11304545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"lipopolysaccharide-1,5-galactosyltransferase activity","synonyms":[{"name":"LPS-1,5-galactosyltransferase activity","type":"exact"},{"name":"UDP-D-galactose:(glucosyl)lipopolysaccharide-1,5-D-galactosyltransferase","type":"exact"}],"termid":"GO:0035496"}


id: PBO:0045597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 8 (pseudogene)","termid":"PBO:0045597"}


id: PBO:0049492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.B variant histone 2","termid":"PBO:0049492"}


id: GO:2000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xyloglucan catabolic process","synonyms":[{"name":"regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000951"}


id: PBO:0044833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 121","termid":"PBO:0044833"}


id: SO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short hairpin RNA (shRNA) is an RNA transcript that makes a tight hairpin turn that can be used to silence target gene expression via RNA interference.","definition_xrefs":["PMID:6699500","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shRNA","secondary_identifiers":["http:http\\:en.wikipedia.org/wiki/Small_hairpin_RNA"],"synonyms":[{"name":"short hairpin RNA","type":"exact"},{"name":"small hairpin RNA","type":"exact"}],"termid":"SO:0002031"}


id: MONDO:1011842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granule cell type cerebellar hypoplasia, non-human animal","secondary_identifiers":["OMIA:000427"],"termid":"MONDO:1011842","xrefs":{"Monarch":{"xref_id":"1011842"}}}


id: PBO:0052641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 9","termid":"PBO:0052641"}


id: PBO:0027089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_mitosis","termid":"PBO:0027089"}


id: MONDO:0014649
data:
  {"annotated_genes":["SJAG_04640"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85475],"is_not":false,"summary":null,"term":"MONDO:0014649"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the EDC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616460","DOID:0081213","GARD:22570","UMLS:C4225319","MEDGEN:906893"],"synonyms":[{"name":"EDC3 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT50","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in EDC3","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 50","type":"exact"},{"name":"intellectual disability, autosomal recessive 50","type":"exact"},{"name":"intellectual disability, autosomal recessive type 50","type":"exact"},{"name":"mental retardation, autosomal recessive 50","type":"related"},{"name":"mental retardation, autosomal recessive type 50","type":"exact"}],"termid":"MONDO:0014649","terms_by_termid":{"MONDO:0014649":null},"xrefs":{"Monarch":{"xref_id":"0014649"}}}


id: GO:0032379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"positively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of intracellular lipid transport","synonyms":[{"name":"activation of intracellular lipid transport","type":"narrow"},{"name":"stimulation of intracellular lipid transport","type":"narrow"},{"name":"up regulation of intracellular lipid transport","type":"exact"},{"name":"up-regulation of intracellular lipid transport","type":"exact"},{"name":"upregulation of intracellular lipid transport","type":"exact"}],"termid":"GO:0032379"}


id: GO:0071736
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgG isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex, circulating","termid":"GO:0042571"},{"relation_name":"is_a","term_name":"IgG immunoglobulin complex","termid":"GO:0071735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"IgG immunoglobulin complex, circulating","synonyms":[{"name":"IgG antibody","type":"narrow"},{"name":"IgG1 antibody","type":"narrow"},{"name":"IgG2 antibody","type":"narrow"},{"name":"IgG2a antibody","type":"narrow"},{"name":"IgG2b antibody","type":"narrow"},{"name":"IgG2c antibody","type":"narrow"},{"name":"IgG3 antibody","type":"narrow"},{"name":"IgG4 antibody","type":"narrow"}],"termid":"GO:0071736"}


id: MONDO:0019602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other inborn metabolic disease (obsolete MONDO:0019602)","secondary_identifiers":["Orphanet:91088"],"synonyms":[{"name":"other metabolic disease","type":"related"}],"termid":"MONDO:0019602","xrefs":{"Monarch":{"xref_id":"0019602"}}}


id: MONDO:0025431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infectious diseases of cattle, sheep, and goats, characterized by blepharospasm, lacrimation, conjunctivitis, and varying degrees of corneal opacity and ulceration. In cattle the causative agent is moraxella (moraxella) bovis; in sheep, mycoplasma; rickettsia; chlamydia; or acholeplasma; in goats, rickettsia.","definition_xrefs":["MESH:D007639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"goat disease","termid":"MONDO:0025003"},{"relation_name":"is_a","term_name":"keratoconjunctivitis, non-human animal","termid":"MONDO:1011329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconjunctivitis, infectious","synonyms":[{"name":"Keratoconjunctivitides, infectious","type":"related"},{"name":"infectious Keratoconjunctivitides","type":"related"},{"name":"infectious keratoconjunctivitis","type":"related"}],"termid":"MONDO:0025431","xrefs":{"Monarch":{"xref_id":"0025431"}}}


id: PBO:0029699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_septated_mononucleate_vegetative_cell","termid":"PBO:0029699"}


id: PBO:0058013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3939","termid":"PBO:0058013"}


id: PBO:0003800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding methyltransferase (predicted)","termid":"PBO:0003800"}


id: PBO:0064588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member H","termid":"PBO:0064588"}


id: MONDO:0011445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the SPG11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 11","secondary_identifiers":["NCIT:C148317","UMLS:C1858479","OMIM:604360","Orphanet:2822","SCTID:715491000","DOID:0110764","GARD:4919","MEDGEN:388073"],"synonyms":[{"name":"HSP-TCC","type":"exact"},{"name":"Nakamura Osame syndrome","type":"related"},{"name":"Nakamura-Osame syndrome","type":"exact"},{"name":"SPG11","type":"exact"},{"name":"SPG11 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive spastic paraplegia 11","type":"exact"},{"name":"autosomal recessive spastic paraplegia complicated with thin corpus callosum","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 11","type":"exact"},{"name":"autosomal recessive spastic paraplegia with mental impairment and thin corpus callosum","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in SPG11","type":"exact"},{"name":"hereditary spastic paraplegia mental impairment and thin corpus callosum","type":"related"},{"name":"hereditary spastic paraplegia type 11","type":"exact"},{"name":"spastic paraplegia - intellectual deficit - thin corpus callosum","type":"related"},{"name":"spastic paraplegia 11","type":"related"},{"name":"spastic paraplegia 11, autosomal recessive","type":"related"},{"name":"spastic paraplegia, autosomal recessive, complicated, with thin corpus callosum","type":"related"},{"name":"spastic paraplegia, autosomal recessive, with mental impairment and thin corpus callosum","type":"related"},{"name":"spastic paraplegia-intellectual disability-thin corpus callosum syndrome","type":"exact"}],"termid":"MONDO:0011445","xrefs":{"Monarch":{"xref_id":"0011445"}}}


id: MONDO:0004322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises from the ovary and is composed of cytotrophoblasts, syncytiotrophoblasts, and extravillous trophoblasts. The prognosis is less favorable than gestational choriocarcinoma.","definition_xrefs":["NCIT:C39991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian primitive germ cell tumor","termid":"MONDO:0003408"},{"relation_name":"is_a","term_name":"choriocarcinoma of ovary","termid":"MONDO:0003507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-gestational ovarian choriocarcinoma","secondary_identifiers":["DOID:7665","MEDGEN:274798","UMLS:C1518355"],"termid":"MONDO:0004322","xrefs":{"Monarch":{"xref_id":"0004322"}}}


id: GO:0018274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine and peptidyl-serine to form a (2Xi,9S)-L-lysinoalanine cross-link.","definition_xrefs":["RESID:AA0123"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysinoalanine (obsolete GO:0018274)","termid":"GO:0018274"}


id: MONDO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal edema","termid":"MONDO:0006712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"secondary corneal edema","secondary_identifiers":["SCTID:27536004","DOID:11032","UMLS:C0155110","ICD9:371.22","MEDGEN:509795"],"termid":"MONDO:0001181","xrefs":{"Monarch":{"xref_id":"0001181"}}}


id: PBO:0061676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 85","termid":"PBO:0061676"}


id: PATO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000098 insecticide sensitivity (obsolete PATO:0000098)","termid":"PATO:0000098"}


id: PBO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses frp1","termid":"PBO:0000367"}


id: GO:0047146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sterigmatocystin + S-adenosyl-L-methionine = 7-O-methylsterigmatocystin + S-adenosyl-homocysteine.","definition_xrefs":["MetaCyc:2.1.1.110-RXN","EC:2.1.1.110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"sterigmatocystin 7-O-methyltransferase activity","secondary_identifiers":["RHEA:15561"],"synonyms":[{"name":"O-methyltransferase II activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin methyltransferase activity","type":"related"}],"termid":"GO:0047146"}


id: GO:0005618
data:
  {"annotated_genes":["SJAG_04720","SJAG_02916","SJAG_02222","SJAG_03828","SJAG_02131","SJAG_01321","SJAG_00784","SJAG_00239","SJAG_03013","SJAG_04238","SJAG_03903","SJAG_04864","SJAG_00027","SJAG_02945","SJAG_01975","SJAG_06621","SJAG_02478","SJAG_02093","SJAG_01290","SJAG_05285","SJAG_03483","SJAG_04073","SJAG_04771","SJAG_01288","SJAG_03057","SJAG_01028","SJAG_01755","SJAG_02135","SJAG_04723","SJAG_03295","SJAG_06622","SJAG_04327","SJAG_02192","SJAG_03824","SJAG_04236","SJAG_01835","SJAG_01017","SJAG_01086","SJAG_00096","SJAG_00876","SJAG_02649","SJAG_00218","SJAG_04067","SJAG_04184","SJAG_00620","SJAG_00340","SJAG_03204","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109382,114673,114383,118086,90584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[108084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043188"},{"annotations":[92106],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[89031],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[107174,103286,103287,103035,116861],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[118635,74861,109226,118078,101830,109224,71613,109227,77024,109228,113643,94355,106422,115902,72820,91931,109229,73937,107009,114778,102768,115925,76786,78173,73755,90264,115057,90459,109230,113644,76215,109225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009277"},{"annotations":[87857],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"},{"annotations":[87961,87962,116118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031160"}]},"cv_name":"cellular_component","definition":"The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.","definition_xrefs":["ISBN:0198547684","GOC:giardia","Wikipedia:Microbial_cyst","PMID:15134259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00340":null,"SJAG_00620":null,"SJAG_00784":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01086":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_01975":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02135":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02916":null,"SJAG_02945":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03483":null,"SJAG_03824":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04327":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_05285":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell wall","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cell_wall"],"termid":"GO:0005618","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0009277":null,"GO:0010339":null,"GO:0031160":null,"GO:0043188":null,"GO:0070263":null}}


id: PBO:0075391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp4 transcription factor","termid":"PBO:0075391"}


id: GO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3'-(1'-L-histidyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0270"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3'-(1'-L-histidyl)-L-tyrosine (obsolete GO:0018152)","termid":"GO:0018152"}


id: MONDO:0008717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromesomelic dysplasia, Hunter-Thomson type is an autosomal recessively inherited form of acromesomelic dysplasia characterized by severe dwarfism (adult height approximately 120 cm) with abnormalities limited to the limbs (affecting the lower limbs more than upper limbs, with middle and distal segments being the most affected), severe shortening, absence or fusion of tubular bones of hands and feet and large joint dislocations. As seen in acromesomelic dysplasia, Grebe type and acromesomelic dysplasia, Maroteaux type, facial features and intelligence are normal.","definition_xrefs":["Orphanet:968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia 2C, Hunter-Thompson type","secondary_identifiers":["UMLS:C2930970","OMIM:201250","MEDGEN:419681","GARD:506","DOID:0080051"],"synonyms":[{"name":"AMDH","type":"related"},{"name":"acromesomelic dwarfism","type":"exact"},{"name":"acromesomelic dysplasia 2C, Hunter-Thompson type","type":"exact"},{"name":"acromesomelic dysplasia Hunter Thompson type","type":"related"},{"name":"acromesomelic dysplasia, Hunter-Thompson type","type":"exact"}],"termid":"MONDO:0008717","xrefs":{"Monarch":{"xref_id":"0008717"}}}


id: GO:0102819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: bixin aldehyde + O2 + NAD = norbixin + NADH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete bixin aldehyde dehydrogenase activity (obsolete GO:0102819)","termid":"GO:0102819"}


id: PBO:0049646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.Y histone 2","termid":"PBO:0049646"}


id: GO:0016889
data:
  {"annotated_genes":["SJAG_03675","SJAG_02708","SJAG_01044","SJAG_05237","SJAG_00623","SJAG_04752"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[74774,59693,79536,101496,78905,95073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 3'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_02708":null,"SJAG_03675":null,"SJAG_04752":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA endonuclease activity, producing 3'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.22.-"],"synonyms":[{"name":"endodeoxyribonuclease activity, producing 3'-phosphomonoesters","type":"exact"},{"name":"endodeoxyribonuclease activity, producing other than 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016889","terms_by_termid":{"GO:0008821":null,"GO:0048257":null}}


id: PBO:0028723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_actomyosin_contractile_ring","termid":"PBO:0028723"}


id: PBO:0046148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elaC ribonuclease Z 1","termid":"PBO:0046148"}


id: FYPO:0003142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased RNA level during cellular response to MMS","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"decreased mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"decreased transcript level during cellular response to methyl methanesulfonate","type":"exact"},{"name":"reduced RNA level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0003142"}


id: PBO:0059751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 25","termid":"PBO:0059751"}


id: FYPO:0007938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tea tree oil. Cells stop growing (and may die) at a concentration of tea tree oil that allows wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tea tree oil","termid":"FYPO:0007938"}


id: FYPO:0004466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to camptothecin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to camptothecin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to CPT","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0004466"}


id: FYPO:0000597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport","termid":"FYPO:0003578"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal vacuolar transport during vegetative growth","synonyms":[{"name":"abnormal vacuolar protein transport during vegetative growth","type":"narrow"},{"name":"abnormal vacuolar transport during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole transport during vegetative growth","type":"exact"}],"termid":"FYPO:0000597"}


id: FYECO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium containing a low concentration of glucose (~0.5%) as carbon source, salts and water.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low glucose MM","synonyms":[{"name":"low glucose minimal medium","type":"exact"}],"termid":"FYECO:0000104"}


id: PBO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-29 (pseudogene)","termid":"PBO:0051147"}


id: PR:Q9URW9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URW9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase-like protein C922.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.07c","synonyms":[{"name":"Spom972h-atd2","type":"exact"}],"termid":"PR:Q9URW9"}


id: PBO:0043482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 4","termid":"PBO:0043482"}


id: PBO:0065473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 11","termid":"PBO:0065473"}


id: GO:0034644
data:
  {"annotated_genes":["SJAG_05197","SJAG_00814","SJAG_01262","SJAG_00272","SJAG_04150","SJAG_01010","SJAG_02334","SJAG_02818","SJAG_04190","SJAG_02200","SJAG_02182","SJAG_04877","SJAG_00208","SJAG_03898","SJAG_00863","SJAG_01648","SJAG_02199","SJAG_00729","SJAG_02828"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103142,77250,95571,109420],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[69185,97453,104545,106267,76010,88353,65061,66005,67864,70439,66647,94006,60311,96350,113135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ultraviolet radiation (UV light) stimulus. Ultraviolet radiation is electromagnetic radiation with a wavelength in the range of 10 to 380 nanometers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"},{"relation_name":"is_a","term_name":"cellular response to light stimulus","termid":"GO:0071482"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"cellular response to UV light stimulus","type":"exact"},{"name":"cellular response to UV radiation stimulus","type":"exact"},{"name":"cellular response to ultraviolet light stimulus","type":"exact"},{"name":"cellular response to ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0034644","terms_by_termid":{"GO:0070914":null,"GO:1904161":null}}


id: MONDO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the submandibular gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submandibular gland disorder","secondary_identifiers":["DOID:12897","MEDGEN:52535","UMLS:C0038557","MESH:D013364"],"synonyms":[{"name":"disease of submandibular gland","type":"exact"},{"name":"disease or disorder of submandibular gland","type":"exact"},{"name":"disorder of submandibular gland","type":"exact"},{"name":"submandibular gland disease","type":"exact"},{"name":"submandibular gland disease or disorder","type":"exact"}],"termid":"MONDO:0001597","xrefs":{"Monarch":{"xref_id":"0001597"}}}


id: PR:Q12701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A STE20/SPS1-related proline-alanine-rich protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04944","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ksg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.15c","secondary_identifiers":["UniProtKB:Q12701"],"synonyms":[{"name":"Spom972h-STK39","type":"exact"}],"termid":"PR:Q12701"}


id: MONDO:0021201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the skin, caused by bacteria, viruses, parasites, or fungi. Examples of bacterial infection include carbuncles, furuncles, impetigo, erysipelas, and abscesses. Examples of viral infection include shingles, warts, molluscum contagiosum, and pityriasis rosea. Examples of parasitic infection include scabies and lice. Examples of fungal infection include athlete's foot, yeast infection, and ringworm.","definition_xrefs":["NCIT:C35025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin infection","secondary_identifiers":["SCTID:19824006","UMLS:C0037278","MEDGEN:52365"],"synonyms":[{"name":"skin infection","type":"exact"}],"termid":"MONDO:0021201","xrefs":{"Monarch":{"xref_id":"0021201"}}}


id: PBO:0073463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein D","termid":"PBO:0073463"}


id: GO:0008440
data:
  {"annotated_genes":["SJAG_03409","SJAG_02321"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71588,75936],"is_not":false,"summary":null,"term":"GO:0008440"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:11020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 3-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1855233","KEGG_REACTION:R03433","EC:2.7.1.127","MetaCyc:2.7.1.127-RXN","Reactome:R-HSA-1855153"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 3-kinase activity","type":"broad"},{"name":"IP3 3-kinase activity","type":"narrow"},{"name":"IP3K activity","type":"narrow"},{"name":"Ins(1,4,5)P3 3-kinase activity","type":"related"},{"name":"inositol trisphosphate 3-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 3-kinase activity","type":"broad"}],"termid":"GO:0008440","terms_by_termid":{"GO:0008440":null}}


id: PBO:0115010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic P body 3'-5'-exoribonuclease Dis3L2","termid":"PBO:0115010"}


id: PBO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1 (predicted)","termid":"PBO:0000660"}


id: MOD:01980
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glycosyl-arginine.","definition_xrefs":["RESID:AA0327","PubMed:8521968","Unimod:41#R","PubMed:15279557","PubMed:9536051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"omega-N-glycosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:01980"}


id: PBO:0030403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_potassium_chloride","termid":"PBO:0030403"}


id: MONDO:0700007
data:
  {"annotated_genes":["SJAG_04000","SJAG_04621","SJAG_00933","SJAG_00487","SJAG_05979","SJAG_00640","SJAG_04148","SJAG_01185","SJAG_00093","SJAG_03182","SJAG_03361","SJAG_04491","SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014628"},{"annotations":[86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[85672,85673,87633,87634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012197"},{"annotations":[85419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800029"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[86180,86179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"A disease or disorder for which the cause is of uncertain or unknown.","definition_xrefs":["MONDO:patterns/idiopathic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00233":null,"SJAG_00487":null,"SJAG_00640":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_04000":null,"SJAG_04148":null,"SJAG_04491":null,"SJAG_04621":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"idiopathic disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0277553","MEDGEN:548250"],"synonyms":[{"name":"idiopathic disorder","type":"exact"}],"termid":"MONDO:0700007","terms_by_termid":{"MONDO:0011303":null,"MONDO:0012197":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014628":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0800029":null},"xrefs":{"Monarch":{"xref_id":"0700007"}}}


id: PR:Q09855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat-containing protein pof11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.01","synonyms":[{"name":"Spom972h-pof11","type":"exact"},{"name":"meiotically up-regulated gene 156 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09855"}


id: MONDO:0023305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heavy metal poisoning refers to when excessive exposure to a heavy metal affects the normal function of the body. Examples of heavy metals that can cause toxicity include lead, mercury, arsenic, cadmium, and chromium. Exposure may occur through the diet, from medications, from the environment, or in the course of work or play. Heavy metals can enter the body through the skin, or by inhalation or ingestion. Toxicity can result from sudden, severe exposure, or from chronic exposure over time. Symptoms can vary depending on the metal involved, the amount absorbed, and the age of the person exposed. For example, young children are more susceptible to the effects of lead exposure because they absorb more compared with adults and their brains are still developing. Nausea, vomiting, diarrhea, and abdominal pain are common symptoms of acute metal ingestion. Chronic exposure may cause various symptoms resulting from damage to body organs, and may increase the risk of cancer. Treatment depends on the circumstances of the exposure.","definition_xrefs":["GARD:0006577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal poisoning","secondary_identifiers":["ICD9:985.8","NORD:1219","SCTID:85866007","MESH:D000075322","GARD:6577","EFO:1001518"],"synonyms":[{"name":"chronic heavy metal poisoning","type":"related"},{"name":"heavy metal poisoning","type":"exact"},{"name":"heavy metal toxicity","type":"related"},{"name":"heavy metal toxicosis","type":"related"},{"name":"toxic effect of heavy metal","type":"exact"}],"termid":"MONDO:0023305","xrefs":{"Monarch":{"xref_id":"0023305"}}}


id: GO:2000491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatic stellate cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell activation","termid":"GO:2000489"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell activation","termid":"GO:0035733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell activation","termid":"GO:2000491"}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: GO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-glutaryl-L-lysyl-[protein] + NAD+ + H2O = 2''-O-glutaryl-ADP-D-ribose + nicotinamide + L-lysyl-[protein].","definition_xrefs":["PMID:24703693","RHEA:47664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"protein-glutaryllysine deglutarylase activity","termid":"GO:0061697"}


id: PBO:0029404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromosome_morphology","termid":"PBO:0029404"}


id: PBO:0088113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartate and glutamate exporter; member of a family of seven genes (AVT1-7) related to vesicular GABA-glycine transporters; involved in compartmentalizing acidic amino acids in response to nitrogen starvation; AVT6 has a paralog, AVT5, that arose from the whole genome duplication","termid":"PBO:0088113"}


id: FYPO:0004045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which vegetative a cell is elongated, and contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated tetranucleate vegetative cell","termid":"FYPO:0004044"},{"relation_name":"is_a","term_name":"tetranucleate vegetative cell with fragmented septum","termid":"FYPO:0004046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"elongated tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"elongated tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"elongated tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"},{"name":"long tetranucleate vegetative cell with fragmented septum","type":"exact"}],"termid":"FYPO:0004045"}


id: PBO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell","termid":"PBO:0030010"}


id: MONDO:0018694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired abnormal communication between the trachea and the esophagus.","definition_xrefs":["NCIT:C35080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated tracheo-esophageal fistula","secondary_identifiers":["Orphanet:454750","GARD:21895"],"synonyms":[{"name":"H-type tracheoesophageal fistula","type":"exact"},{"name":"isolated tracheoesophageal fistula","type":"related"},{"name":"tracheo-esophageal fistula","type":"exact"},{"name":"tracheoesophageal fistula","type":"exact"}],"termid":"MONDO:0018694","xrefs":{"Monarch":{"xref_id":"0018694"}}}


id: MONDO:0008649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venular insufficiency, systemic","secondary_identifiers":["OMIM:192700","MEDGEN:348623","MESH:C566004","UMLS:C1860465"],"synonyms":[{"name":"venular insufficiency, systemic","type":"exact"}],"termid":"MONDO:0008649","xrefs":{"Monarch":{"xref_id":"0008649"}}}


id: GO:0034869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + OH- = 2,4,4-trimethyl-3-oxopentanoate + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-3-oxopentanoyl-CoA thioesterase activity (obsolete GO:0034869)","termid":"GO:0034869"}


id: PBO:0072441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 5","termid":"PBO:0072441"}


id: GO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of asymmetry from the dorsal to the ventral side; as, the dorsoventral axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of bilateral symmetry","termid":"GO:0009855"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of dorsal/ventral asymmetry","synonyms":[{"name":"determination of adaxial/abaxial asymmetry","type":"related"},{"name":"determination of dorsal-ventral asymmetry","type":"exact"},{"name":"determination of dorsoventral asymmetry","type":"exact"}],"termid":"GO:0048262"}


id: MONDO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the fallopian tube. Representative examples include carcinoma, carcinosarcoma, and leiomyosarcoma.","definition_xrefs":["NCIT:C7480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"fallopian tube neoplasm","termid":"MONDO:0021092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube cancer","secondary_identifiers":["Orphanet:180242","icd11.foundation:459381514","MedDRA:10025915","MEDGEN:102276","GARD:20204","ICD9:183.2","SCTID:363444001","UMLS:C0153579","DOID:1964"],"synonyms":[{"name":"cancer of fallopian tube","type":"exact"},{"name":"cancer of fallopian tubes","type":"exact"},{"name":"fallopian tube cancer","type":"exact"},{"name":"fallopian tube malignant neoplasm","type":"exact"},{"name":"fallopian tube malignant tumor","type":"exact"},{"name":"fallopian tube malignant tumour","type":"exact"},{"name":"malignant fallopian tube neoplasm","type":"exact"},{"name":"malignant fallopian tube tumor","type":"exact"},{"name":"malignant fallopian tube tumour","type":"exact"},{"name":"malignant neoplasm of fallopian tube","type":"exact"},{"name":"malignant neoplasm of the fallopian tube","type":"exact"},{"name":"malignant neoplasm of uterine tube","type":"exact"},{"name":"malignant tubal tumor","type":"exact"},{"name":"malignant tubal tumour","type":"exact"},{"name":"malignant tumor of fallopian tube","type":"exact"},{"name":"malignant tumor of fallopian tubes","type":"exact"},{"name":"malignant tumor of the fallopian tube","type":"exact"},{"name":"malignant tumour of fallopian tube","type":"exact"},{"name":"malignant tumour of fallopian tubes","type":"exact"},{"name":"malignant tumour of the fallopian tube","type":"exact"},{"name":"neoplasm, fallopian tube, malignant","type":"exact"},{"name":"tubal cancer","type":"exact"},{"name":"tumor of the fallopian tube","type":"broad"},{"name":"tumor, fallopian tube, malignant","type":"exact"},{"name":"tumour of the fallopian tube","type":"broad"}],"termid":"MONDO:0002158","xrefs":{"Monarch":{"xref_id":"0002158"}}}


id: SO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a long non-coding RNA.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_gene","synonyms":[{"name":"lnc RNA gene","type":"exact"},{"name":"lnc_RNA_gene","type":"exact"},{"name":"long_non_coding_RNA_gene","type":"exact"}],"termid":"SO:0002127"}


id: GO:0080172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth and establishes the non-random spatial arrangement of the cells in the petal epidermis.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal epidermis patterning","termid":"GO:0080172"}


id: PBO:0013044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triacylglycerol lipase ptl2","termid":"PBO:0013044"}


id: GO:0098941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from presynapse to postynapse, across the synaptic cleft, mediated by a trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098941"}


id: GO:0010138
data:
  {"annotated_genes":["SJAG_00533","SJAG_04713","SJAG_03708","SJAG_04709","SJAG_04354"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68209,93311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[68208,92310,88791,93312,87806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"The pathway by which pyrimidine bases or pyrimidine ribonucleosides from pyrimidine nucleotide breakdown are converted back to pyrimidine ribonucleotides. The salvage pathway is important where there is no de novo pyrimidine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide salvage","termid":"GO:0032262"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleotide salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0010138","terms_by_termid":{"GO:0044206":null,"GO:0044211":null}}


id: PBO:0011067
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in bacteria","termid":"PBO:0011067"}


id: PBO:0053053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP7 pseudogene 4","termid":"PBO:0053053"}


id: GO:0031728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR3 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CCR3 chemokine receptor binding","synonyms":[{"name":"CCR3 chemokine receptor ligand","type":"narrow"},{"name":"eosinophil eotaxin receptor binding","type":"exact"}],"termid":"GO:0031728"}


id: PBO:0029071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_during_vegetative_growth","termid":"PBO:0029071"}


