# terms

id: PBO:0087899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; involved in regulating multidrug resistance and oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro","termid":"PBO:0087899"}


id: MONDO:0019355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory multisystem disorder characterized clinically by fever of unknown origin, arthralgia or arthritis, hyperleucocytosis, and typical skin rash.","definition_xrefs":["Orphanet:829"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult-onset Still disease","secondary_identifiers":["NANDO:1200282","SCTID:239920006","EFO:0007135","MESH:D016706","MESH:D014924","MEDGEN:39007","DOID:14256","NORD:737","ICD9:714.2","icd11.foundation:549009522","ICD9:759.89","SCTID:68190001","GARD:436","UMLS:C0085253","MedDRA:10058493","MedDRA:10064056"],"synonyms":[{"name":"AOSD","type":"exact"},{"name":"Adult-Onset Still's Disease","type":"exact"},{"name":"Still's disease adult onset","type":"related"},{"name":"Wissler-Fanconi syndrome","type":"exact"},{"name":"adult Still's disease","type":"related"},{"name":"adult onset Still's disease","type":"exact"},{"name":"adult-onset Still disease","type":"exact"},{"name":"adult-onset Still's disease","type":"exact"}],"termid":"MONDO:0019355","xrefs":{"Monarch":{"xref_id":"0019355"}}}


id: PBO:0030125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphorus_level","termid":"PBO:0030125"}


id: MONDO:0011538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontoocular syndrome","secondary_identifiers":["MESH:C565340","OMIM:605321","UMLS:C1854405","MEDGEN:344278"],"synonyms":[{"name":"frontoocular syndrome","type":"exact"}],"termid":"MONDO:0011538","xrefs":{"Monarch":{"xref_id":"0011538"}}}


id: PBO:0074880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59B","termid":"PBO:0074880"}


id: GO:0072532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on triferuloyl spermidine or any of its mono- or di-(hydroxyferuloyl)-spermidine derivatives.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}


id: PR:G2TRR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC336.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C336.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.16","synonyms":[{"name":"Spom972h-SPBC336.16","type":"exact"}],"termid":"PR:G2TRR0"}


id: PBO:0076418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b pseudogene 1","termid":"PBO:0076418"}


id: PBO:0054301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1692","termid":"PBO:0054301"}


id: PBO:0017078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR10","termid":"PBO:0017078"}


id: PBO:0065350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked 2","termid":"PBO:0065350"}


id: PBO:0014296
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. tabacum Ran-AI","termid":"PBO:0014296"}


id: PBO:0059816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 42","termid":"PBO:0059816"}


id: MONDO:0013831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconus","termid":"MONDO:0015486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconus 6","secondary_identifiers":["UMLS:C3553306","MEDGEN:766220","OMIM:614623"],"synonyms":[{"name":"KTCN6","type":"exact"},{"name":"keratoconus 6","type":"exact"}],"termid":"MONDO:0013831","xrefs":{"Monarch":{"xref_id":"0013831"}}}


id: PBO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1B","termid":"PBO:0042566"}


id: PBO:0082327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the 19S regulatory particle of the 26S proteasome; one of six ATPases of the regulatory particle; involved in the degradation of ubiquitinated substrates; required for optimal CDC20 transcription; interacts with Rpn12p and Ubr1p; mutant has aneuploidy tolerance","termid":"PBO:0082327"}


id: MONDO:1012857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pituitary dwarfism that occurs in dogs due to a mutation in the LHX3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"pituitary dwarfism, dog","termid":"MONDO:1012066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary dwarfism, LHX3-related, dog","secondary_identifiers":["OMIA:002314-9615"],"synonyms":[{"name":"pituitary hormone deficiency, LHX3-related, dog","type":"related"}],"termid":"MONDO:1012857","xrefs":{"Monarch":{"xref_id":"1012857"}}}


id: MONDO:0030323
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86685],"is_not":false,"summary":null,"term":"MONDO:0030323"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 31","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619422","DOID:0070412","UMLS:C5543627","MEDGEN:1786855"],"synonyms":[{"name":"SCAR31","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 31","type":"exact"}],"termid":"MONDO:0030323","terms_by_termid":{"MONDO:0030323":null},"xrefs":{"Monarch":{"xref_id":"0030323"}}}


id: PBO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein destruction box","termid":"PBO:0001695"}


id: MONDO:0041114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficient blood distribution to the limbs caused by narrowing or obstruction of the lumen of the peripheral arteries.","definition_xrefs":["MEDGEN:115991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ischemic disease","termid":"MONDO:0005053"},{"relation_name":"is_a","term_name":"peripheral arterial disease","termid":"MONDO:0005386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral ischemia","secondary_identifiers":["SCTID:233958001","UMLS:C0235490"],"synonyms":[{"name":"peripheral ischaemic vascular disease","type":"related"},{"name":"peripheral ischemia","type":"exact"},{"name":"peripheral ischemic vascular disease","type":"related"}],"termid":"MONDO:0041114","xrefs":{"Monarch":{"xref_id":"0041114"}}}


id: PBO:0049504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 11","termid":"PBO:0049504"}


id: SO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"VIPER retrotransposons are members of the YR_retrotransposon (SO:0002286 superfamily with protein domains: RT, RH, YR. RT is a reverse transcriptase. RH is RNAse H. YR is Tyrosine recombinase. Inverted terminal repeats (ITRs) in VIPER are arranged in A-pol-B-A-B order where A and B represent ITRs. VIPER is only found in kinetoplastida genomes.","definition_xrefs":["PMID:16297462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Viper_YR_retrotransposon","synonyms":[{"name":"RYV retrotransposon","type":"exact"},{"name":"Viper YR retrotransposon","type":"exact"},{"name":"Viper retrotransposon","type":"exact"}],"termid":"SO:0002289"}


id: PBO:0057528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 645","termid":"PBO:0057528"}


id: GO:0031603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The core complex of a proteasome located in the cytosol of a cell.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome core complex","termid":"GO:0005839"},{"relation_name":"part_of","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"cytosolic proteasome core complex","termid":"GO:0031603"}


id: PR:P30290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mik1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inhibitor protein kinase mik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.14","synonyms":[{"name":"Spom972h-mik1","type":"exact"}],"termid":"PR:P30290"}


id: PBO:0027141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methyltransferase_activity","termid":"PBO:0027141"}


id: FYPO:0004106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, has no septum, and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"inviable multinucleate aseptate vegetative cell","synonyms":[{"name":"inviable multinucleate aseptate cell during vegetative growth","type":"exact"},{"name":"inviable multinucleate aseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; multinucleate aseptate vegetative cell","type":"exact"},{"name":"multinucleate aseptate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0004106"}


id: FYPO:0003317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased, and the protein is also detected distributed throughout the plasma membrane and/or cell cortex.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to growing cell tip","termid":"FYPO:0002871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","synonyms":[{"name":"decreased protein localisation to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell end, with protein distributed in plasma membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell cortex","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in cell membrane or cortex","type":"exact"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane","type":"narrow"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip, with protein distributed in plasma membrane or cortex, during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip, with protein distributed in plasma membrane or cortex","type":"exact"}],"termid":"FYPO:0003317"}


id: GO:0008933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a peptidoglycan chain into a peptidoglycan chain with N-acetyl-1,6-anhydromuramyl-[peptide] at the reducing end + a peptidoglycan chain with N-acetylglucosamine at the non-reducing end. Includes endolytic transglycosylase activity that fragments the glycan chain internally and exolytic transgylcosylase activity that cleaves a terminal disaccharide from the end of the glycan strand.","definition_xrefs":["PMID:10964424","EC:4.2.2.29","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan lytic transglycosylase activity","synonyms":[{"name":"lytic murein transglycosylase activity","type":"related"},{"name":"lytic transglycosylase activity","type":"related"},{"name":"murein transglycosylase activity","type":"related"}],"termid":"GO:0008933"}


id: GO:0004179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, Xaa-Xbb- from a peptide, amide or arylamide. Xaa is preferably Ala, but may be most amino acids including Pro (slow action). When a terminal hydrophobic residue is followed by a prolyl residue, the two may be released as an intact Xaa-Pro dipeptide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane alanyl aminopeptidase activity (obsolete GO:0004179)","synonyms":[{"name":"membrane alanyl aminopeptidase activity","type":"exact"}],"termid":"GO:0004179"}


id: MONDO:0017229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 12p is a rare partial autosomal monosomy characterized by language development delay with childhood apraxia of speech, mild intellectual disability, behavourial abnormalities (autistic spectrum disorder, attention deficit hyperactivity disorder, anxiety) and mildly dysmorphic nonspecific features. Additional clinical features may include muscular hypotonia and joint laxity, hernias and microcephaly.","definition_xrefs":["Orphanet:280325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12p deletion","termid":"MONDO:0022174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 12p","secondary_identifiers":["MEDGEN:1648932","UMLS:C4749581","GARD:21078"],"synonyms":[{"name":"12p13.33 microdeletion syndrome","type":"exact"},{"name":"Del(12)(p13.33)","type":"exact"},{"name":"distal deletion 12p","type":"exact"},{"name":"distal monosomy type 12p","type":"exact"}],"termid":"MONDO:0017229","xrefs":{"Monarch":{"xref_id":"0017229"}}}


id: PBO:0027404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0027404"}


id: GO:1905810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory synapse pruning.","definition_xrefs":["GOC:TermGenie","PMID:27779093","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"regulates","term_name":"excitatory synapse pruning","termid":"GO:1905805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of excitatory synapse pruning","synonyms":[{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"}],"termid":"GO:1905810"}


id: PBO:0077917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 8","termid":"PBO:0077917"}


id: MONDO:0032878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with behavioral abnormalities, absent speech, and hypotonia","secondary_identifiers":["UMLS:C5231471","OMIM:618718","MEDGEN:1684663"],"synonyms":[{"name":"NEDBASH","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH BEHAVIORAL ABNORMALITIES, ABSENT SPEECH, AND HYPOTONIA","type":"related"}],"termid":"MONDO:0032878","xrefs":{"Monarch":{"xref_id":"0032878"}}}


id: GO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the clypeus over time, from its formation to the mature structure. The clypeus is the shield-shaped plate on an insect's head.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus development","termid":"GO:0048723"}


id: MONDO:0003493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of keratinizing or non-keratinizing malignant squamous cells. Approximately 10-20% of cases occur in combination with thymoma. The prognosis depends on the tumor stage and the degree of cellular differentiation.","definition_xrefs":["NCIT:C6455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"thymus squamous cell carcinoma","secondary_identifiers":["EFO:1000579","UMLS:C1336082","DOID:5530","MEDGEN:234814"],"synonyms":[{"name":"Thymus squamous cell carcinoma","type":"exact"},{"name":"epidermoid thymic carcinoma","type":"exact"},{"name":"squamous cell carcinoma of Thymus","type":"exact"},{"name":"squamous cell carcinoma of the Thymus","type":"exact"},{"name":"thymic squamous cell carcinoma","type":"exact"},{"name":"thymus squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003493","xrefs":{"Monarch":{"xref_id":"0003493"}}}


id: PBO:0109311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA oncogene in liver cancer 1","termid":"PBO:0109311"}


id: PBO:0077849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1","termid":"PBO:0077849"}


id: GO:0047775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + citramalate = acetate + (3S)-citramalyl-CoA.","definition_xrefs":["MetaCyc:CITRAMALATE-COA-TRANSFERASE-RXN","EC:2.8.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"citramalate CoA-transferase activity","secondary_identifiers":["RHEA:17621"],"synonyms":[{"name":"acetyl-CoA:citramalate CoA-transferase activity","type":"related"}],"termid":"GO:0047775"}


id: PBO:0060094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 41","termid":"PBO:0060094"}


id: PBO:0048716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLR5 pseudogene 2","termid":"PBO:0048716"}


id: MONDO:0003122
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  {"annotated_genes":["SJAG_01236","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[86474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"A progressive neurodegenerative disorder caused by a disruption in the connection between the striatum and the substantia nigra. It is a type of multiple system atrophy (MSA). Signs and symptoms include rigidity, instability, impaired speech, and slow movements.","definition_xrefs":["NCIT:C125695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066","MONDO:0005559"],"is_obsolete":false,"name":"striatonigral degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:333.0","DOID:4751","OMIMPS:271930","MESH:D020955","MEDGEN:124366","UMLS:C0270733","SCTID:29618004","ICD10CM:G23.2","icd11.foundation:195535779"],"termid":"MONDO:0003122","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null},"xrefs":{"Monarch":{"xref_id":"0003122"}}}


id: PBO:0080191
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor D","termid":"PBO:0080191"}


id: GO:0010733
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein glutathionylation. Protein glutathionylation is the protein modification process in which a glutathione molecule is added to a protein amino acid through a disulfide linkage.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein glutathionylation","termid":"GO:0010732"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"positively_regulates","term_name":"protein glutathionylation","termid":"GO:0010731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein glutathionylation","synonyms":[{"name":"positive regulation of protein amino acid glutathionylation","type":"exact"}],"termid":"GO:0010733"}


id: GO:0061101
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a neuroendocrine cell. A neuroendocrine cell is a cell that receives input form a neuron which controls the secretion of an endocrine substance.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"neuroepithelial cell differentiation","termid":"GO:0060563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroendocrine cell differentiation","termid":"GO:0061101"}


id: PBO:0076276
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syncollin","termid":"PBO:0076276"}


id: PBO:0068017
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 322","termid":"PBO:0068017"}


id: GO:0031566
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular process in which the contractile ring cytokinetic ring attains its fully functional state.","definition_xrefs":["PMID:25451933","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"actomyosin contractile ring organization","termid":"GO:0044837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"actomyosin contractile ring maturation","synonyms":[{"name":"actomyosin contractile ring maintenance","type":"related"},{"name":"cytokinesis, contractile ring maintenance","type":"related"}],"termid":"GO:0031566"}


id: PBO:0070865
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L14 pseudogene 3","termid":"PBO:0070865"}


id: MONDO:0001769
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acquired tear duct stenosis","secondary_identifiers":["DOID:13655","ICD9:375.56","MEDGEN:509872","SCTID:193995004","UMLS:C0155248"],"synonyms":[{"name":"acquired nasolacrimal duct stenosis","type":"exact"},{"name":"acquired stenosis of nasolacrimal duct","type":"exact"},{"name":"stenosis of nasolacrimal duct, acquired","type":"exact"},{"name":"tear duct - acquired stenosis","type":"exact"}],"termid":"MONDO:0001769","xrefs":{"Monarch":{"xref_id":"0001769"}}}


id: PBO:0060267
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 1","termid":"PBO:0060267"}


id: GO:0016453
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  {"annotated_genes":["SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003985"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to a carbon atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"},{"relation_name":"is_a","term_name":"C-acyltransferase activity","termid":"GO:0016408"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00413":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"C-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016453","terms_by_termid":{"GO:0003985":null}}


id: MONDO:0000357
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete West syndrome (obsolete MONDO:0000357)","termid":"MONDO:0000357","xrefs":{"Monarch":{"xref_id":"0000357"}}}


id: PBO:0048936
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gon-4 like","termid":"PBO:0048936"}


id: PBO:0079284
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 3","termid":"PBO:0079284"}


id: MONDO:0005264
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brief attack (from a few minutes to an hour) of cerebral dysfunction of vascular origin, with no persistent neurological deficit.","definition_xrefs":["NCIT:C50781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain ischemia","termid":"MONDO:0005299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient ischemic attack","secondary_identifiers":["SCTID:266257000","ICD9:435","ICD9:435.8","DOID:224","ICD9:435.9","HP:0002326","MEDGEN:853","MESH:D002546","EFO:0003764","UMLS:C0007787"],"synonyms":[{"name":"TIA","type":"exact"},{"name":"TIA - transient ischaemic attack","type":"exact"},{"name":"TIA - transient ischemic attack","type":"exact"},{"name":"attack, transient ischaemic","type":"exact"},{"name":"attack, transient ischemic","type":"exact"},{"name":"ischaemic attack, transient","type":"exact"},{"name":"ischemic attack, transient","type":"exact"},{"name":"transient cerebral ischaemia","type":"exact"},{"name":"transient cerebral ischemia","type":"related"},{"name":"transient cerebral ischemia (disorder) [ambiguous]","type":"exact"},{"name":"transient ischaemic attack (disease)","type":"exact"},{"name":"transient ischaemic attacks","type":"exact"},{"name":"transient ischemic attack","type":"exact"},{"name":"transient ischemic attack (disease)","type":"exact"},{"name":"transient ischemic attacks","type":"exact"}],"termid":"MONDO:0005264","xrefs":{"Monarch":{"xref_id":"0005264"}}}


id: PBO:0002153
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex ATPase subunit Get3 (predicted)","termid":"PBO:0002153"}


id: GO:1905486
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior/posterior axon guidance.","definition_xrefs":["PMID:16516839","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"anterior/posterior axon guidance","termid":"GO:0033564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior/posterior axon guidance","synonyms":[{"name":"regulation of anterior-posterior axon guidance","type":"exact"},{"name":"regulation of anterior/posterior axon pathfinding","type":"exact"}],"termid":"GO:1905486"}


id: MONDO:0000531
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the bronchus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchogenic carcinoma","termid":"MONDO:0002806"},{"relation_name":"is_a","term_name":"pulmonary mucoepidermoid carcinoma","termid":"MONDO:0005616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bronchus mucoepidermoid carcinoma","secondary_identifiers":["DOID:0050916"],"synonyms":[{"name":"bronchus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0000531","xrefs":{"Monarch":{"xref_id":"0000531"}}}


id: MONDO:0043123
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis","termid":"MONDO:0008779"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"massa casaer ceulemans syndrome","secondary_identifiers":["MESH:C536031","GARD:3407","MEDGEN:418986","UMLS:C2931090"],"synonyms":[{"name":"arthrogryposis multiplex congenita associated with lissencephaly","type":"related"}],"termid":"MONDO:0043123","xrefs":{"Monarch":{"xref_id":"0043123"}}}


id: PBO:0117242
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor methyltransferase Efm7","termid":"PBO:0117242"}


id: MOD:01498
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01498"}


id: GO:0160249
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through a UDP-glucose intermediate.","definition_xrefs":["MetaCyc:PWY-5067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycogen biosynthetic process via UDP-glucose","termid":"GO:0160249"}


id: GO:1905039
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id: GO:0036312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a regulatory subunit of phosphatidylinositol 3-kinase. The regulatory subunit associates with the catalytic subunit to regulate both its activity and subcellular location.","definition_xrefs":["GOC:bf","PMID:20505341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase binding","termid":"GO:0043548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase regulatory subunit binding","synonyms":[{"name":"PI3K regulatory subunit binding","type":"exact"},{"name":"p85 binding","type":"related"}],"termid":"GO:0036312"}


id: PBO:0112610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospore membrane formation protein Mug56","termid":"PBO:0112610"}


id: PBO:0070593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 60","termid":"PBO:0070593"}


id: GO:0048821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte development","synonyms":[{"name":"RBC development","type":"exact"},{"name":"red blood cell development","type":"exact"}],"termid":"GO:0048821"}


id: GO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the rate of proteolysis catalyzed by a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity involved in apoptotic process","termid":"GO:0016505"},{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0008233"},{"rel_name":"regulates","termid":"GO:0140096"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140096","GO:0030234","GO:0016787","GO:0140677","GO:0003824","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"cysteine-type endopeptidase activator activity involved in apoptotic process","secondary_identifiers":["Reactome:R-HSA-205117","Reactome:R-HSA-449073"],"synonyms":[{"name":"caspase activator activity","type":"broad"}],"termid":"GO:0008656"}


id: PBO:0052447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 2 pseudogene 4","termid":"PBO:0052447"}


id: PBO:0042740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein O","termid":"PBO:0042740"}


id: PBO:0075867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 7","termid":"PBO:0075867"}


id: PBO:0040603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B melanoma antigen","termid":"PBO:0040603"}


id: PBO:0081905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 862","termid":"PBO:0081905"}


id: MONDO:0006273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A low grade fibromyxoid sarcoma characterized by the presence of prominent collagen rosettes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade fibromyxoid sarcoma","termid":"MONDO:0006272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"low grade fibromyxoid sarcoma with giant collagen rosettes","secondary_identifiers":["EFO:1000329","UMLS:C1708749","MEDGEN:310942","NCIT:C45203"],"synonyms":[{"name":"hyalinizing spindle cell tumor with giant Rosettes","type":"exact"},{"name":"hyalinizing spindle cell tumour with giant Rosettes","type":"exact"}],"termid":"MONDO:0006273","xrefs":{"Monarch":{"xref_id":"0006273"}}}


id: PBO:0083722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-I subunit required to stabilize ESCRT-I core complex oligomers; the ESCRT-I core complex (Stp22p, Vps28p, Srn2p) is involved in ubiquitin-dependent sorting of proteins into the endosome; deletion mutant is sensitive to rapamycin and nystatin","termid":"PBO:0083722"}


id: PBO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 40","termid":"PBO:0052525"}


id: GO:0030132
data:
  {"annotated_genes":["SJAG_00800","SJAG_00104","SJAG_01167","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58326,74704,108645,78455],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"clathrin-coated pit","termid":"GO:0005905"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"clathrin coat of coated pit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030132","terms_by_termid":{"GO:0030122":null}}


id: PBO:0047065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 124 member B","termid":"PBO:0047065"}


id: GO:0075193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of haustorium mother cell formation","synonyms":[{"name":"regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075193"}


id: PBO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp40 (predicted)","termid":"PBO:0000820"}


id: GO:0075292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of aplanospore formation, a process in which a nonmotile, asexual spore is formed within a cell in certain algae and fungi (commonly in the Phycomycetes), the wall of aplanospore is distinct from that of the parent cell.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sporangiospore formation","termid":"GO:0075288"},{"relation_name":"is_a","term_name":"regulation of aplanospore formation","termid":"GO:0075290"},{"relation_name":"negatively_regulates","term_name":"aplanospore formation","termid":"GO:0075289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aplanospore formation","termid":"GO:0075292"}


id: PBO:0055262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2689","termid":"PBO:0055262"}


id: PBO:0065054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 8","termid":"PBO:0065054"}


id: FYPO:0002004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable microtubules of one or more types.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"microtubules absent from cell","synonyms":[{"name":"absent microtubules","type":"exact"},{"name":"microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002004"}


id: PBO:0113007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Asn rich cytoplasmic protein with a role in clathrin suppresion; contains RGG motifs; high-copy suppressor of group II intron-splicing defects of a mutation in MRS2 and of a conditional mutation in POL1 (DNA polymerase alpha); possible role in mitochondrial mRNA splicing","termid":"PBO:0113007"}


id: MONDO:1011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, non-human animal","secondary_identifiers":["OMIA:001094"],"termid":"MONDO:1011779","xrefs":{"Monarch":{"xref_id":"1011779"}}}


id: PBO:0086090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase; similar to prokaryotic phosphotransfer enzymes; null mutant shows alterations in glucose metabolism; GFP-fusion protein localizes to the cytoplasm and nucleus; YNL108C has a paralog, TFC7, that arose from the whole genome duplication","termid":"PBO:0086090"}


id: PBO:0051709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase like 1","termid":"PBO:0051709"}


id: PBO:0041270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 2","termid":"PBO:0041270"}


id: PBO:0035854
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_nucleosome-depleted_regions_during_vegetative_growth","termid":"PBO:0035854"}


id: MONDO:0006787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign cystic proliferation of the sweat glands with apocrine or eccrine differentiation. It usually presents as a dome-shaped, cystic papular or nodular lesion usually in the face and neck. It is a unilocular or mutlilocular lesion lined by an inner and an outer layer of epithelium. Complete excision is usually curative.","definition_xrefs":["NCIT:C3760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"apocrine sweat gland neoplasm","termid":"MONDO:0003686"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidrocystoma","secondary_identifiers":["EFO:1000967","UMLS:C0206672","MedDRA:10059019","MESH:D018251","ICD9:709.8","ICDO:8404/0","SCTID:254725004","MEDGEN:61656","icd11.foundation:2040265542","DOID:3893"],"synonyms":[{"name":"Hydrocystoma","type":"exact"},{"name":"apocrine cystadenoma","type":"narrow"},{"name":"apocrine/eccrine hidrocystoma","type":"exact"},{"name":"cystadenoma","type":"related"},{"name":"eccrine cystadenoma","type":"narrow"},{"name":"eccrine hidrocystoma of skin","type":"exact"},{"name":"hidrocystoma","type":"exact"},{"name":"hidrocystoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006787","xrefs":{"Monarch":{"xref_id":"0006787"}}}


id: GO:0050748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein metabolic process","synonyms":[{"name":"down regulation of lipoprotein metabolic process","type":"exact"},{"name":"down-regulation of lipoprotein metabolic process","type":"exact"},{"name":"downregulation of lipoprotein metabolic process","type":"exact"},{"name":"inhibition of lipoprotein metabolic process","type":"narrow"},{"name":"negative regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050748"}


id: SO:0001013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multiple nucleotide polymorphism with alleles of common length > 1, for example AAA/TTT.","direct_ancestors":[{"relation_name":"is_a","term_name":"MNV","termid":"SO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNP","synonyms":[{"name":"multiple nucleotide polymorphism","type":"related"}],"termid":"SO:0001013"}


id: PBO:0073889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC12A5 and MMP9 antisense RNA 1","termid":"PBO:0073889"}


id: PBO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-5-)-methyltransferase (predicted)","termid":"PBO:0000751"}


id: MONDO:0011366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the ovary and originates from germ cells. Representative examples include teratoma, embryonal carcinoma, yolk sac tumor, and dysgerminoma.","definition_xrefs":["NCIT:C3873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian germ cell tumor","secondary_identifiers":["DOID:2156","EFO:1000419","MEDGEN:65958","UMLS:C0238324","OMIM:603737","ICD9:239.5","ONCOTREE:OGCT","SCTID:237059008"],"synonyms":[{"name":"germ cell neoplasm of ovary","type":"exact"},{"name":"germ cell neoplasm of the ovary","type":"exact"},{"name":"germ cell tumor of ovary","type":"exact"},{"name":"germ cell tumor of the ovary","type":"exact"},{"name":"germ cell tumour of ovary","type":"exact"},{"name":"germ cell tumour of the ovary","type":"exact"},{"name":"ovarian germ cell cancer","type":"related"},{"name":"ovarian germ cell neoplasm","type":"exact"},{"name":"ovarian germ cell tumor","type":"exact"},{"name":"ovary germ cell tumor","type":"exact"},{"name":"ovary germ cell tumour","type":"exact"}],"termid":"MONDO:0011366","xrefs":{"Monarch":{"xref_id":"0011366"}}}


id: GO:0016068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by antigen recognition by antibodies bound to Fc receptors on mast cells or basophils, occurring within minutes after exposure of a sensitized individual to the antigen, and leading to the release of a variety of inflammatory mediators such as histamines.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type I hypersensitivity","secondary_identifiers":["Wikipedia:Type_I_hypersensitivity"],"synonyms":[{"name":"immediate hypersensitivity response","type":"exact"}],"termid":"GO:0016068"}


id: GO:0032597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor into a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor transport within lipid bilayer","termid":"GO:0032595"},{"relation_name":"is_a","term_name":"protein transport into membrane raft","termid":"GO:0032596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"B cell receptor transport into membrane raft","synonyms":[{"name":"B cell receptor translocation into membrane raft","type":"exact"},{"name":"B cell receptor transport into lipid raft","type":"exact"},{"name":"BCR translocation into membrane raft","type":"exact"},{"name":"BCR transport into membrane raft","type":"exact"}],"termid":"GO:0032597"}


id: PBO:0042641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 16 pseudogene","termid":"PBO:0042641"}


id: GO:0016403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(G),N(G)-dimethyl-L-arginine + H2O = dimethylamine + L-citrulline.","definition_xrefs":["EC:3.5.3.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dimethylargininase activity","secondary_identifiers":["RHEA:17305","MetaCyc:DIMETHYLARGININASE-RXN","Reactome:R-HSA-5693373"],"synonyms":[{"name":"N(G),N(G)-dimethylarginine dimethylaminohydrolase activity","type":"related"},{"name":"NG,NG-dimethyl-L-arginine dimethylamidohydrolase activity","type":"related"},{"name":"NG,NG-dimethylarginine dimethylaminohydrolase activity","type":"related"},{"name":"dimethylarginine dimethylaminohydrolase activity","type":"related"}],"termid":"GO:0016403"}


id: FYPO:0005758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from late-firing origins is abnormal.","definition_xrefs":["PomBase:mah","GO:0101017","PMID:22987637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from late origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from late origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of late origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at late origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from late replication origin","type":"exact"}],"termid":"FYPO:0005758"}


id: PBO:0051638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP3 pseudogene 1","termid":"PBO:0051638"}


id: MONDO:0018018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"wild type ATTR amyloidosis","secondary_identifiers":["UMLS:C0342623","NANDO:1200212","GARD:21501","Orphanet:330001","ICD9:277.39","MEDGEN:87446","DOID:0080937","SCTID:237877004"],"synonyms":[{"name":"ATTRwt amyloidosis","type":"exact"},{"name":"ATTRwt-related amyloidosis","type":"exact"},{"name":"SSA","type":"exact"},{"name":"Senile systemic amyloidosis","type":"exact"},{"name":"wild type ATTR-related amyloidosis","type":"exact"}],"termid":"MONDO:0018018","xrefs":{"Monarch":{"xref_id":"0018018"}}}


id: MONDO:0014390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypotrichosis in which the cause of the disease is a mutation in the KRT71 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"isolated familial wooly hair disorder","termid":"MONDO:0008686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 13","secondary_identifiers":["MEDGEN:863053","UMLS:C4014616","DOID:0110710","GARD:16029","OMIM:615896"],"synonyms":[{"name":"HYPT13","type":"exact"},{"name":"KRT71 hypotrichosis","type":"exact"},{"name":"hypotrichosis 13","type":"exact"},{"name":"hypotrichosis caused by mutation in KRT71","type":"exact"},{"name":"hypotrichosis type 13","type":"exact"},{"name":"hypotrichosis with woolly hair","type":"exact"},{"name":"hypotrichosis with wooly hair","type":"exact"},{"name":"hypt13","type":"exact"}],"termid":"MONDO:0014390","xrefs":{"Monarch":{"xref_id":"0014390"}}}


id: PBO:0113170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for V-ATPase function; not actual component of vacuolar H+-ATPase (V-ATPase) complex; diverged ortholog of human VMA21/XMEA (X-linked Myopathy with Excessive Autophagy); functions in assembly of V-ATPase; localizes to endoplasmic reticulum (ER)","termid":"PBO:0113170"}


id: PBO:0073411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 15","termid":"PBO:0073411"}


id: PBO:0067687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 4","termid":"PBO:0067687"}


id: MONDO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystic echinococcosis (obsolete MONDO:0002023)","termid":"MONDO:0002023","xrefs":{"Monarch":{"xref_id":"0002023"}}}


id: GO:0010140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which adenine, hypoxanthine and their nucleosides from purine nucleotides breakdown are converted back to purine nucleotides. The salvage pathway is important where there is no de-novo purine nucleotide biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete adenine, hypoxanthine and their nucleoside salvage (obsolete GO:0010140)","synonyms":[{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010140"}


id: PBO:0031856
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-haploinsufficient","termid":"PBO:0031856"}


id: GO:0032489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Cdc42 protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"regulates","term_name":"Cdc42 protein signal transduction","termid":"GO:0032488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of Cdc42 protein signal transduction","termid":"GO:0032489"}


id: MONDO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the liver.","definition_xrefs":["NCIT:C4438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"liver angiosarcoma","secondary_identifiers":["GARD:5813","DOID:268","UMLS:C0345907","SCTID:109844006","ICDO:9124/3","ONCOTREE:LIAS","ICD10CM:C22.3","MEDGEN:138027"],"synonyms":[{"name":"Lias","type":"related"},{"name":"angiosarcoma (disease) of liver","type":"exact"},{"name":"angiosarcoma of liver","type":"exact"},{"name":"angiosarcoma of the liver","type":"exact"},{"name":"hemangiosarcoma of liver","type":"exact"},{"name":"hemangiosarcoma of the liver","type":"exact"},{"name":"hepatic angiosarcoma","type":"exact"},{"name":"hepatic hemangiosarcoma","type":"exact"},{"name":"liver angiosarcoma","type":"exact"},{"name":"liver angiosarcoma (disease)","type":"exact"},{"name":"liver hemangiosarcoma","type":"exact"},{"name":"primary angiosarcoma of liver","type":"exact"},{"name":"primary angiosarcoma of the liver","type":"exact"}],"termid":"MONDO:0002387","xrefs":{"Monarch":{"xref_id":"0002387"}}}


id: GO:0002752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a cell surface pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["ISBN:0781735149","GOC:add","GOC:ar","PMID:15199967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response activating cell surface receptor signaling pathway","termid":"GO:0002220"},{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface pattern recognition receptor signaling pathway","synonyms":[{"name":"cell surface PAMP receptor signaling pathway","type":"exact"},{"name":"cell surface PRR signaling pathway","type":"exact"},{"name":"cell surface pathogen receptor signaling pathway","type":"exact"},{"name":"cell surface pattern recognition receptor signalling pathway","type":"exact"}],"termid":"GO:0002752"}


id: MONDO:0043549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medical condition characterized by major shock and renal failure after a crushing injury to skeletal muscle.","definition_xrefs":["Wikipedia:Crush_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"crush syndrome","secondary_identifiers":["MESH:D003444","UMLS:C0010392","SCTID:23697004","MEDGEN:3671"],"synonyms":[{"name":"acute renal failure due to rhabdomyolysis","type":"related"},{"name":"bywaters' syndrome","type":"related"},{"name":"crush kidney","type":"related"},{"name":"crush syndrome","type":"exact"},{"name":"crush syndromes","type":"related"},{"name":"ischaemic muscular necrosis syndrome","type":"related"},{"name":"ischemic muscular necrosis syndrome","type":"related"},{"name":"myoglobinuric acute renal failure","type":"related"},{"name":"myoglobinuric nephrosis","type":"related"},{"name":"renal failure following crushing injury","type":"related"},{"name":"syndrome, crush","type":"related"},{"name":"syndromes, crush","type":"related"}],"termid":"MONDO:0043549","xrefs":{"Monarch":{"xref_id":"0043549"}}}


id: PBO:0039237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-aminolevulinate synthase 2","termid":"PBO:0039237"}


id: PBO:0065040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 5","termid":"PBO:0065040"}


id: GO:0090387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome as a part of apoptotic cell clearance.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagolysosome assembly","termid":"GO:0001845"},{"relation_name":"part_of","term_name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"phagolysosome assembly involved in apoptotic cell clearance","termid":"GO:0090387"}


id: MONDO:0020343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alpha-crystallinopathy (obsolete MONDO:0020343)","secondary_identifiers":["Orphanet:98910"],"synonyms":[{"name":"CRYAB-related myofobrillar myopathy","type":"exact"}],"termid":"MONDO:0020343","xrefs":{"Monarch":{"xref_id":"0020343"}}}


id: PBO:0062242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BH member 1 pseudogene","termid":"PBO:0062242"}


id: PBO:0072433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 7","termid":"PBO:0072433"}


id: PBO:0079434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 2","termid":"PBO:0079434"}


id: FYPO:0001299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which palmitoyl-CoA ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"abolished long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished palmitoyl-CoA ligase activity","synonyms":[{"name":"abolished palmitoyl-CoA synthetase activity","type":"exact"},{"name":"palmitoyl-CoA ligase activity abolished","type":"exact"}],"termid":"FYPO:0001299"}


id: PBO:0074064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A39 pseudogene 2","termid":"PBO:0074064"}


id: GO:0016628
data:
  {"annotated_genes":["SJAG_04107","SJAG_03240","SJAG_00174","SJAG_01786","SJAG_00203","SJAG_03236","SJAG_04652","SJAG_02717","SJAG_02151","SJAG_04954","SJAG_02007","SJAG_01362","SJAG_04810","SJAG_03024","SJAG_01041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58736,67769],"is_not":false,"summary":null,"term":"GO:0016628"},{"annotations":[80660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050613"},{"annotations":[80670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000246"},{"annotations":[59925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[95346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"},{"annotations":[73437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[105012,89799,109943,118719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106414"},{"annotations":[61697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160198"},{"annotations":[61704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102389"},{"annotations":[77146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043115"},{"annotations":[79129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008977"},{"annotations":[68106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004665"},{"annotations":[111632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019166"},{"annotations":[109944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[109945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[105013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[118720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[118721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[66145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["EC:1.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00203":null,"SJAG_01041":null,"SJAG_01362":null,"SJAG_01786":null,"SJAG_02007":null,"SJAG_02151":null,"SJAG_02717":null,"SJAG_03024":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_04107":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-4755572","Reactome:R-HSA-9661726","Reactome:R-HSA-9661745","Reactome:R-HSA-4419979"],"termid":"GO:0016628","terms_by_termid":{"GO:0000246":null,"GO:0004318":null,"GO:0004665":null,"GO:0008977":null,"GO:0016156":null,"GO:0016628":null,"GO:0019166":null,"GO:0043115":null,"GO:0050613":null,"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0102389":null,"GO:0106414":null,"GO:0141148":null,"GO:0160198":null}}


id: MONDO:0008948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebrotendinous xanthomatosis (CTX) is an anomaly of bile acid synthesis characterized by neonatal cholestasis, childhood-onset cataract, adolescent to young adult-onset tendon xanthomata, and brain xanthomata with adult-onset neurologic dysfunction.","definition_xrefs":["Orphanet:909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthomatosis","termid":"MONDO:0002615"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"inborn disorder of bile acid synthesis","termid":"MONDO:0019218"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"},{"relation_name":"is_a","term_name":"cholesterol catabolic process disease","termid":"MONDO:0045016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0002525","MONDO:0005328","MONDO:0005066","MONDO:0002561","MONDO:0005244","MONDO:0006025"],"is_obsolete":false,"name":"cerebrotendinous xanthomatosis","secondary_identifiers":["GARD:5622","MESH:D019294","NORD:915","MEDGEN:116041","SCTID:63246000","NANDO:1200856","OMIM:213700","NCIT:C84628","icd11.foundation:1556875179","UMLS:C0238052","DOID:4810"],"synonyms":[{"name":"CTX","type":"exact"},{"name":"CTx","type":"exact"},{"name":"cerebral cholesterinosis","type":"related"},{"name":"cerebrotendinous xanthomatosis","type":"exact"},{"name":"cholestanol storage disease","type":"exact"},{"name":"sterol 27-hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0008948","xrefs":{"Monarch":{"xref_id":"0008948"}}}


id: GO:0035514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more nucleosides within a DNA molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA demethylase activity","termid":"GO:0035514"}


id: MONDO:0011521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 1p36.","definition_xrefs":["DOID:0110882","PMID:19122664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 7","secondary_identifiers":["MESH:C565353","MEDGEN:381452","OMIM:605225","UMLS:C1854573"],"synonyms":[{"name":"IBD7","type":"exact"},{"name":"inflammatory bowel disease 7","type":"exact"},{"name":"inflammatory bowel disease type 7","type":"exact"}],"termid":"MONDO:0011521","xrefs":{"Monarch":{"xref_id":"0011521"}}}


id: GO:0018957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon, where trans-9(S),10(S)-dihydrodiolphenanthrene is the principal intermediate metabolite.","definition_xrefs":["UM-BBD_pathwayID:pha2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene catabolic process","termid":"GO:0042216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenanthrene catabolic process via trans-9(S),10(S)-dihydrodiolphenanthrene","synonyms":[{"name":"phenanthrene breakdown via trans-9(S),10(S)-dihydrodiolphenanthrene","type":"exact"},{"name":"phenanthrene degradation via trans-9(S),10(S)-dihydrodiolphenanthrene","type":"exact"}],"termid":"GO:0018957"}


id: PBO:0047909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(9)(p21)","termid":"PBO:0047909"}


id: PBO:0043628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit alpha","termid":"PBO:0043628"}


id: MONDO:0029131
data:
  {"annotated_genes":["SJAG_04472","SJAG_04656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86703,86704],"is_not":false,"summary":null,"term":"MONDO:0029131"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04472":null,"SJAG_04656":null},"genotype_count":0,"is_obsolete":false,"name":"peripheral neuropathy, autosomal recessive, with or without impaired intellectual development","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648480","UMLS:C4748283","OMIM:618124"],"synonyms":[{"name":"PNRIID","type":"related"},{"name":"peripheral neuropathy, autosomal recessive, with or without impaired intellectual development","type":"exact"}],"termid":"MONDO:0029131","terms_by_termid":{"MONDO:0029131":null},"xrefs":{"Monarch":{"xref_id":"0029131"}}}


id: GO:0140980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleosides within a cell.","definition_xrefs":["PMID:34880500","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleoside homeostasis","termid":"GO:0140980"}


id: PBO:0069008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 252, pseudogene","termid":"PBO:0069008"}


id: PBO:0000118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght3","termid":"PBO:0000118"}


id: PBO:0113329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contributes to high inhibitor stress tolerance; deletion mutant is viable","termid":"PBO:0113329"}


id: PBO:0039116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activation induced cytidine deaminase","termid":"PBO:0039116"}


id: PBO:0058272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-1","termid":"PBO:0058272"}


id: PBO:0117435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2A regulated lncRNA","termid":"PBO:0117435"}


id: PBO:0064978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 34, pseudogene","termid":"PBO:0064978"}


id: PBO:0068392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 212B","termid":"PBO:0068392"}


id: PBO:0001613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf21","termid":"PBO:0001613"}


id: GO:0030188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulates the activity of a molecular chaperone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone regulator activity (obsolete GO:0030188)","synonyms":[{"name":"chaperone regulator activity","type":"exact"}],"termid":"GO:0030188"}


id: MONDO:0011156
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87263],"is_not":false,"summary":null,"term":"MONDO:0011156"}]},"cv_name":"mondo","definition":"Progressive familial intrahepatic cholestasis type 2 (PFIC2), a type of progressive familial intrahepatic cholestasis (PFIC), is a severe, neonatal, hereditary disorder in bile formation that is hepatocellular in origin and not associated with extrahepatic features. Initially, PFIC2 was reported under the name Byler syndrome.","definition_xrefs":["Orphanet:79304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign recurrent intrahepatic cholestasis type 2","termid":"MONDO:0011559"},{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"progressive familial intrahepatic cholestasis type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1288","NANDO:1201044","UMLS:C3489789","MEDGEN:483742","DOID:0070222","icd11.foundation:1168921980","OMIM:601847"],"synonyms":[{"name":"ABCB11 progressive familial intrahepatic cholestasis","type":"exact"},{"name":"BSEP deficiency","type":"exact"},{"name":"PFIC2","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic 2","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 2","type":"related"},{"name":"cholestasis, progressive familial intrahepatic, type 2","type":"exact"},{"name":"progressive familial intrahepatic cholestasis caused by mutation in ABCB11","type":"exact"},{"name":"progressive familial intrahepatic cholestasis type 2","type":"exact"},{"name":"severe ABCB11 deficiency","type":"related"}],"termid":"MONDO:0011156","terms_by_termid":{"MONDO:0011156":null},"xrefs":{"Monarch":{"xref_id":"0011156"}}}


id: GO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"},{"relation_name":"is_a","term_name":"response to sorbitol","termid":"GO:0072708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sorbitol","synonyms":[{"name":"cellular response to glucitol","type":"exact"}],"termid":"GO:0072709"}


id: MONDO:0007278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in mutation in the region 14q22-q23.","definition_xrefs":["DOID:0110227","PMID:6694185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 32 multiple types","secondary_identifiers":["MEDGEN:854634","OMIM:115650","UMLS:C3887926"],"synonyms":[{"name":"CTAA1","type":"narrow"},{"name":"CTPP5","type":"narrow"},{"name":"CTRCT32","type":"exact"},{"name":"anterior polar cataract 1","type":"narrow"},{"name":"cataract 32, multiple types","type":"related"},{"name":"cataract, anterior polar","type":"related"},{"name":"cataract, anterior polar, 1","type":"related"},{"name":"cataract, posterior polar, 5","type":"related"},{"name":"posterior polar cataract 5","type":"narrow"}],"termid":"MONDO:0007278","xrefs":{"Monarch":{"xref_id":"0007278"}}}


id: GO:0015267
data:
  {"annotated_genes":["SJAG_00985","SJAG_02877","SJAG_03114","SJAG_00048","SJAG_04668","SJAG_00438","SJAG_MIT15","SJAG_02564","SJAG_04731","SJAG_02532","SJAG_02019","SJAG_00133","SJAG_04122","SJAG_05204","SJAG_00542","SJAG_04136","SJAG_04471","SJAG_01090","SJAG_MIT09","SJAG_02105","SJAG_00836","SJAG_05342","SJAG_03895","SJAG_00915","SJAG_02598","SJAG_07003","SJAG_05229","SJAG_01168","SJAG_MIT37","SJAG_03925","SJAG_02322"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70186,75727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008519"},{"annotations":[114740,72693,77592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005262"},{"annotations":[73394,80187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"},{"annotations":[70761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[99955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[104084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[96018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008381"},{"annotations":[75913,93628,73132,78387,95181,78181,102138,119366,70411,108124,108216,119373,79566,57851,94211,70256,119360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"},{"annotations":[92747,99956,114230,92689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"},{"annotations":[72013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"passive transmembrane transporter activity","termid":"GO:0022803"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01090":null,"SJAG_01168":null,"SJAG_02019":null,"SJAG_02105":null,"SJAG_02322":null,"SJAG_02532":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02877":null,"SJAG_03114":null,"SJAG_03895":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04136":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_04731":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05342":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"channel activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0022838","Reactome:R-HSA-3779381","Reactome:R-HSA-8953430","TC:1","GO:0015249","GO:0015268"],"synonyms":[{"name":"alpha-type channel activity","type":"related"},{"name":"channel-forming toxin activity","type":"related"},{"name":"channel/pore class transporter activity","type":"exact"},{"name":"nonselective channel activity","type":"exact"},{"name":"pore activity","type":"broad"},{"name":"pore class transporter activity","type":"related"},{"name":"substrate-specific channel activity","type":"related"}],"termid":"GO:0015267","terms_by_termid":{"GO:0005227":null,"GO:0005254":null,"GO:0005262":null,"GO:0008308":null,"GO:0008331":null,"GO:0008381":null,"GO:0008519":null,"GO:0015275":null,"GO:0046933":null,"GO:0140135":null}}


id: PBO:0067238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 309, pseudogene","termid":"PBO:0067238"}


id: GO:1990963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-retinal barrier","synonyms":[{"name":"establishment of BRB","type":"related"},{"name":"establishment of blood-retina barrier","type":"exact"}],"termid":"GO:1990963"}


id: GO:1903762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["PMID:18337493","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (obsolete GO:1903762)","synonyms":[{"name":"activation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"positive regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"up-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"upregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903762"}


id: MONDO:0045060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ductal carcinoma in situ of the breast characterized by the presence of a cribriform architectural pattern.","definition_xrefs":["NCIT:C5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ductal breast carcinoma in situ","termid":"MONDO:0005023"},{"relation_name":"is_a","term_name":"cribriform carcinoma of breast","termid":"MONDO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intraductal cribriform breast adenocarcinoma","secondary_identifiers":["ICDO:8201/2","UMLS:C1334248","MEDGEN:233570"],"synonyms":[{"name":"DCIS of breast with cribriform pattern","type":"exact"},{"name":"DCIS of the breast with cribriform pattern","type":"exact"},{"name":"cribriform DCIS of breast","type":"exact"},{"name":"cribriform DCIS of the breast","type":"exact"},{"name":"cribriform ductal breast carcinoma in situ","type":"exact"},{"name":"cribriform ductal carcinoma in situ of breast","type":"exact"},{"name":"cribriform ductal carcinoma in situ of the breast","type":"exact"},{"name":"ductal carcinoma in situ of breast with cribriform pattern","type":"exact"},{"name":"ductal carcinoma in situ of the breast with cribriform pattern","type":"exact"},{"name":"intraductal cribriform breast adenocarcinoma","type":"exact"},{"name":"non-infiltrating cribriform ductal breast carcinoma","type":"exact"},{"name":"non-invasive cribriform ductal breast carcinoma","type":"exact"}],"termid":"MONDO:0045060","xrefs":{"Monarch":{"xref_id":"0045060"}}}


id: PBO:0045933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor like GTPase 1","termid":"PBO:0045933"}


id: PBO:0063259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 5","termid":"PBO:0063259"}


id: PBO:0089639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0C","termid":"PBO:0089639"}


id: GO:1905455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid progenitor cell differentiation.","definition_xrefs":["PMID:27010503","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901534"},{"relation_name":"is_a","term_name":"regulation of myeloid progenitor cell differentiation","termid":"GO:1905453"},{"relation_name":"positively_regulates","term_name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid progenitor cell differentiation","synonyms":[{"name":"activation of myeloid progenitor cell differentiation","type":"narrow"},{"name":"up regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"up-regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"upregulation of myeloid progenitor cell differentiation","type":"exact"}],"termid":"GO:1905455"}


id: GO:0140758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An metal-dependent isopeptidase activity that cleaves NEDD8 from a target protein to which it is conjugated.","definition_xrefs":["PMID:25628956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"deNEDDylase activity","termid":"GO:0019784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"metal-dependent deNEDDylase activity","termid":"GO:0140758"}


id: GO:0004732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:  pyridoxal + H2O + O2 = 4-pyridoxate + H+ + H2O2.","definition_xrefs":["RHEA:23724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde oxidase activity","termid":"GO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyridoxal oxidase activity","secondary_identifiers":["MetaCyc:PYRIDOXAL-OXIDASE-RXN","EC:1.2.3.8"],"synonyms":[{"name":"pyridoxal:oxygen 4-oxidoreductase activity","type":"related"}],"termid":"GO:0004732"}


id: PBO:0080273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 36 pseudogene","termid":"PBO:0080273"}


id: PBO:0089516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain Chc1","termid":"PBO:0089516"}


id: PBO:0066667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR3 antisense RNA 1","termid":"PBO:0066667"}


id: PBO:0084344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lanosterol synthase; an essential enzyme that catalyzes the cyclization of squalene 2,3-epoxide, a step in ergosterol biosynthesis; human LSS functionally complements the lethality of the erg7 null mutation","termid":"PBO:0084344"}


id: FYPO:0007098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing vanadate ions (VO4(3-)).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on vanadate","synonyms":[{"name":"normal cell population growth in presence of vanadate","type":"exact"},{"name":"normal cell population growth on vanadate","type":"exact"},{"name":"normal cell population growth on vanadate ions","type":"exact"},{"name":"normal growth on orthovanadate","type":"exact"},{"name":"normal growth on vanadate(3-)","type":"exact"},{"name":"normal growth on vanadium oxoanion","type":"broad"},{"name":"normal vegetative cell population growth on vanadate","type":"exact"}],"termid":"FYPO:0007098"}


id: MONDO:0007595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor VII and Factor VIII, combined deficiency of","secondary_identifiers":["MEDGEN:341995","OMIM:134430","MESH:C565025","UMLS:C1851377"],"synonyms":[{"name":"factor 7 and Factor VIII, combined deficiency of","type":"related"},{"name":"factor VII and Factor VIII, combined deficiency of","type":"exact"},{"name":"familial multiple coagulation Factor deficiency 4","type":"related"},{"name":"multiple coagulation Factor deficiency 4","type":"related"}],"termid":"MONDO:0007595","xrefs":{"Monarch":{"xref_id":"0007595"}}}


id: PBO:0050747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 9","termid":"PBO:0050747"}


id: GO:0031258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a lamellipodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"lamellipodium","termid":"GO:0030027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"lamellipodium membrane","termid":"GO:0031258"}


id: PBO:0079106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22D1 antisense RNA 1","termid":"PBO:0079106"}


id: MONDO:0006403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from a pleomorphic adenoma in the salivary glands. It usually originates in the parotid gland. Patients usually present with a history of a long-standing tumor mass which grew rapidly in the past few months. Patients with non-invasive or minimally invasive carcinoma have an excellent prognosis. In cases where there is invasion of the surrounding tissues, the clinical course is aggressive.","definition_xrefs":["NCIT:C40410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"carcinoma ex pleomorphic adenoma","termid":"MONDO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland carcinoma ex pleomorphic adenoma","secondary_identifiers":["UMLS:C1519172","DOID:297","MEDGEN:274190","EFO:1000516"],"synonyms":[{"name":"pleomorphic adenoma carcinoma","type":"related"},{"name":"saliva-secreting gland carcinoma ex pleomorphic adenoma","type":"exact"},{"name":"salivary gland carcinoma ex pleomorphic adenoma","type":"exact"}],"termid":"MONDO:0006403","xrefs":{"Monarch":{"xref_id":"0006403"}}}


id: FYPO:0000682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal regulation of molecular function","synonyms":[{"name":"abnormal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0000682"}


id: MONDO:0018110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal idiopathic viral infection (obsolete MONDO:0018110)","secondary_identifiers":["Orphanet:35064"],"termid":"MONDO:0018110","xrefs":{"Monarch":{"xref_id":"0018110"}}}


id: GO:0034218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving ascospore wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of ascospores.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ascospore wall chitin metabolic process (obsolete GO:0034218)","synonyms":[{"name":"ascospore wall chitin metabolism","type":"exact"}],"termid":"GO:0034218"}


id: PBO:0031847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_Golgi_morphology","termid":"PBO:0031847"}


id: GO:0050067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + O2 = 5-aminopentanamide + CO2 + H2O.","definition_xrefs":["RHEA:14601","EC:1.13.12.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lysine 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00449","MetaCyc:LYSINE-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-lysine-2-monooxygenase activity","type":"related"},{"name":"L-lysine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"lysine monooxygenase activity","type":"related"},{"name":"lysine oxygenase activity","type":"related"}],"termid":"GO:0050067"}


id: GO:0103001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: dimethyl sulfoxide + H+ + NADH + O2 = dimethyl sulfone + H2O + NAD+ and dimethyl sulfide + H+ + NADH + O2 = dimethyl sulfoxide + H2O + NAD+.","definition_xrefs":["PMID:9345770","EC:1.14.13.245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dimethylsulfoxide oxygenase activity","synonyms":[{"name":"assimilatory dimethylsulfide S-monooxygenase activity","type":"exact"}],"termid":"GO:0103001"}


id: PBO:0079481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma","termid":"PBO:0079481"}


id: PBO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh2 (predicted)","termid":"PBO:0010193"}


id: PBO:0027780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_ribosomal_S6_protein_dephosphorylation_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0027780"}


id: MONDO:0005377
data:
  {"annotated_genes":["SJAG_04000","SJAG_01185","SJAG_00864","SJAG_04013","SJAG_00093","SJAG_03182","SJAG_04148","SJAG_01374","SJAG_04017","SJAG_03986","SJAG_03361","SJAG_00471","SJAG_04621","SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[86180,86179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[86739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[86741,86740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[86265,86264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[85367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[86184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"A collection of symptoms that include severe edema, proteinuria, and hypoalbuminemia; it is indicative of renal dysfunction.","definition_xrefs":["NCIT:C34845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nephrosis","termid":"MONDO:0002331"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00471":null,"SJAG_00864":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_03986":null,"SJAG_04000":null,"SJAG_04013":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1184209951","DOID:1184","EFO:0004255","NANDO:2100009","MESH:D009404","ICD9:581.9","UMLS:C0027726","MEDGEN:10308","ICD9:581","SCTID:52254009"],"synonyms":[{"name":"nephrosis","type":"related"},{"name":"nephrotic syndrome","type":"exact"},{"name":"nephrotic syndromes","type":"exact"},{"name":"syndrome, nephrotic","type":"exact"},{"name":"syndromes, nephrotic","type":"exact"}],"termid":"MONDO:0005377","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0026726":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0005377"}}}


id: PBO:0076029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 25 pseudogene 1","termid":"PBO:0076029"}


id: PBO:0079847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone B","termid":"PBO:0079847"}


id: GO:0050941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pigment cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"regulation of pigment cell differentiation","termid":"GO:0050932"},{"relation_name":"negatively_regulates","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pigment cell differentiation","synonyms":[{"name":"down regulation of pigment cell differentiation","type":"exact"},{"name":"down-regulation of pigment cell differentiation","type":"exact"},{"name":"downregulation of pigment cell differentiation","type":"exact"},{"name":"inhibition of pigment cell differentiation","type":"narrow"}],"termid":"GO:0050941"}


id: PBO:0041144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 3","termid":"PBO:0041144"}


id: PBO:0077171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 2","termid":"PBO:0077171"}


id: GO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mRNA 3'-end processing that involves the binding to and cleavage of a stem-loop structure. For example, histone mRNAs contain a highly conserved stem-loop sequence at the 3' end of the mRNA with a 6 base pairs (bp) stem and a 4-nt loop. The mRNA is cleaved between these two elements, after the fourth or fifth nucleotide, which is typically an adenosine.","definition_xrefs":["GOC:mah","GOC:tb","PMID:17998288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mRNA 3'-end processing by stem-loop binding and cleavage","secondary_identifiers":["Reactome:R-HSA-77588"],"synonyms":[{"name":"histone mRNA 3' end processing","type":"narrow"}],"termid":"GO:0006398"}


id: MONDO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Focal epilepsy-intellectual disability-cerebro-cerebellar malformation is a rare, genetic neurological disorder characterized by early infantile-onset of seizures, borderline to moderate intellectual disability, cerebellar features including dysarthria and ataxia and cerebellar atrophy and cortical thickening observed on MRI imaging. Seizures are typically focal (with prominent eye blinking, facial and limb jerking), precipitated by fever and often commence with an oral sensory aura (anesthetized tongue sensation). When not properly controlled by anti-epileptic medication, weekly frequency and persistence into adult life is observed.","definition_xrefs":["Orphanet:352587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"focal epilepsy-intellectual disability-cerebro-cerebellar malformation","secondary_identifiers":["MEDGEN:1640999","UMLS:C4707306","GARD:21522"],"synonyms":[{"name":"focal epilepsy-intellectual disability-dysarthria-ataxia syndrome","type":"exact"}],"termid":"MONDO:0018125","xrefs":{"Monarch":{"xref_id":"0018125"}}}


id: PBO:0012531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_determination_of","termid":"PBO:0012531"}


id: PBO:0060350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO16 antisense RNA 2","termid":"PBO:0060350"}


id: PR:Q9UTS5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zas1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.04c","synonyms":[{"name":"Spom972h-zas1","type":"exact"}],"termid":"PR:Q9UTS5"}


id: GO:0018798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gallate + H+ = CO2 + pyrogallol.","definition_xrefs":["RHEA:12749","EC:4.1.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"gallate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03247","MetaCyc:GALLATE-DECARBOXYLASE-RXN","UM-BBD_reactionID:r0005"],"synonyms":[{"name":"gallate carboxy-lyase (pyrogallol-forming)","type":"related"},{"name":"gallate carboxy-lyase activity","type":"related"},{"name":"gallic acid decarboxylase activity","type":"exact"}],"termid":"GO:0018798"}


id: GO:0031608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits forming the inner ring of the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome core complex, beta-subunit complex (obsolete GO:0031608)","termid":"GO:0031608"}


id: MONDO:0010902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia, Reardon type is an extremely rare type of spondyloepiphyseal dysplasia described in several members of a single family to date and characterized by short stature, vertebral and femoral abnormalities, cervical instability and neurologic manifestations secondary to anomalies of the odontoid process.","definition_xrefs":["Orphanet:163662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, Reardon type","secondary_identifiers":["SCTID:718764004","UMLS:C1833603","MEDGEN:322238","MESH:C563472","GARD:16994","icd11.foundation:1019322569","OMIM:600561"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with atlantoaxial instability","type":"related"}],"termid":"MONDO:0010902","xrefs":{"Monarch":{"xref_id":"0010902"}}}


id: GO:1902040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed dormancy process.","definition_xrefs":["PMID:23378449","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed dormancy process","termid":"GO:2000033"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed dormancy process","synonyms":[{"name":"activation of seed dormancy","type":"related"},{"name":"activation of seed dormancy process","type":"narrow"},{"name":"positive regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy","type":"related"},{"name":"up regulation of seed dormancy process","type":"exact"},{"name":"up-regulation of seed dormancy","type":"related"},{"name":"up-regulation of seed dormancy process","type":"exact"},{"name":"upregulation of seed dormancy","type":"related"},{"name":"upregulation of seed dormancy process","type":"exact"}],"termid":"GO:1902040"}


id: MONDO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a retrospective gap in memory of important personal information, usually of a traumatic or stressful nature; the memory loss far exceeds ordinary forgetfulness and is not the result of substance use or the consequence of a medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociative amnesia","secondary_identifiers":["UMLS:C0236795","NCIT:C94328","icd11.foundation:626975732","MEDGEN:66743","SCTID:84209002","ICD10CM:F44.0","DOID:11037","ICD9:300.12"],"synonyms":[{"name":"psychogenic amnesia","type":"exact"}],"termid":"MONDO:0001185","xrefs":{"Monarch":{"xref_id":"0001185"}}}


id: GO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbut-2-enoyl-CoA + ATP + bicarbonate = trans-3-methylglutaconyl-CoA + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.4.1.4","RHEA:13589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"methylcrotonoyl-CoA carboxylase activity","secondary_identifiers":["Reactome:R-HSA-9909466","Reactome:R-HSA-70773","MetaCyc:METHYLCROTONYL-COA-CARBOXYLASE-RXN","Reactome:R-HSA-508308","KEGG_REACTION:R04138"],"synonyms":[{"name":"3-methylcrotonoyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"},{"name":"MCCC activity","type":"exact"},{"name":"beta-methylcrotonyl CoA carboxylase activity","type":"related"},{"name":"beta-methylcrotonyl coenzyme A carboxylase activity","type":"related"},{"name":"beta-methylcrotonyl-CoA carboxylase activity","type":"related"},{"name":"methylcrotonyl coenzyme A carboxylase activity","type":"related"},{"name":"methylcrotonyl-CoA carboxylase activity","type":"related"}],"termid":"GO:0004485"}


id: PBO:0087076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L37B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; protein abundance increases in response to DNA replication stress; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37B has a paralog, RPL37A, that arose from the whole genome duplication","termid":"PBO:0087076"}


id: GO:0090501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA phosphodiester bond hydrolysis (obsolete GO:0090501)","termid":"GO:0090501"}


id: GO:0009249
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105558],"is_not":false,"summary":null,"term":"GO:0009249"}]},"cv_name":"biological_process","definition":"The lipoylation of peptidyl-lysine to form peptidyl-N6-lipoyl-L-lysine.","definition_xrefs":["RESID:AA0118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"protein lipoylation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0018055","Reactome:R-HSA-9857492"],"synonyms":[{"name":"peptidyl-lysine lipoylation","type":"exact"},{"name":"protein-lipoic acid cofactor linkage","type":"exact"}],"termid":"GO:0009249","terms_by_termid":{"GO:0009249":null}}


id: GO:0004719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + protein L-beta-aspartate = S-adenosyl-L-homocysteine + protein L-beta-aspartate methyl ester.","definition_xrefs":["EC:2.1.1.77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"},{"relation_name":"is_a","term_name":"protein carboxyl O-methyltransferase activity","termid":"GO:0051998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008276","GO:0003824","GO:0016741","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase activity","secondary_identifiers":["RHEA:12705","Reactome:R-HSA-5676966","MetaCyc:2.1.1.77-RXN"],"synonyms":[{"name":"D-aspartyl/L-isoaspartyl methyltransferase activity","type":"related"},{"name":"L-aspartyl/L-isoaspartyl protein methyltransferase activity","type":"related"},{"name":"L-isoaspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"L-isoaspartyl/D-aspartyl protein carboxyl methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein (D-aspartate) methyltransferase activity","type":"related"},{"name":"protein D-aspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartate methyltransferase activity","type":"related"},{"name":"protein L-isoaspartyl methyltransferase activity","type":"related"},{"name":"protein O-methyltransferase (L-isoaspartate)","type":"related"},{"name":"protein beta-aspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate O-methyltransferase activity","type":"related"},{"name":"protein-L-isoaspartate(D-aspartate) O-methyltransferase activity","type":"related"},{"name":"protein-beta-aspartate O-methyltransferase activity","type":"related"}],"termid":"GO:0004719"}


id: MONDO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A plague in which the bacteria have infected the lymphatic system.","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"plague","termid":"MONDO:0019095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"bubonic plague","secondary_identifiers":["DOID:10773","UMLS:C0282312","icd11.foundation:1742025109","ICD9:020.0","SCTID:50797007","MEDGEN:76407","ICD10CM:A20.0","GARD:183"],"synonyms":[{"name":"black death","type":"exact"}],"termid":"MONDO:0001112","xrefs":{"Monarch":{"xref_id":"0001112"}}}


id: MONDO:0002873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular germ cell tumor non-seminomatous (obsolete MONDO:0002873)","termid":"MONDO:0002873","xrefs":{"Monarch":{"xref_id":"0002873"}}}


id: PBO:0005275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase (predicted)","termid":"PBO:0005275"}


id: MONDO:0023557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the vagina. Symptoms include pain and purulent discharge.","definition_xrefs":["NCIT:C84353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective vaginitis","secondary_identifiers":["icd11.foundation:1436361154","SCTID:237091009","UMLS:C0404521","MEDGEN:140795"],"synonyms":[{"name":"Infective vaginitis","type":"related"},{"name":"PV - Vaginal infection","type":"related"},{"name":"Vaginal Infection","type":"related"},{"name":"Vaginal infection","type":"related"},{"name":"vaginal infection","type":"exact"}],"termid":"MONDO:0023557","xrefs":{"Monarch":{"xref_id":"0023557"}}}


id: PBO:0073318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 1","termid":"PBO:0073318"}


id: MONDO:0014529
data:
  {"annotated_genes":["SJAG_03120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85749],"is_not":false,"summary":null,"term":"MONDO:0014529"}]},"cv_name":"mondo","definition":"A syndrome that is characterized by delayed development, intellectual disability, abnormal facial and dental findings, and cerebellar hypoplasia and that has material basis in homozygous or compound heterozygous mutation in the BRF1 gene on chromosome 14q32.","definition_xrefs":["DOID:0080898"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"cerebellar-facial-dental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:863932","GARD:17761","UMLS:C4015495","Orphanet:444072","OMIM:616202"],"synonyms":[{"name":"CEREBELLOFACIODENTAL syndrome","type":"related"},{"name":"CFDS","type":"related"},{"name":"Cerebellofaciodental syndrome","type":"exact"},{"name":"cerebellar-facial-dental syndrome","type":"exact"}],"termid":"MONDO:0014529","terms_by_termid":{"MONDO:0014529":null},"xrefs":{"Monarch":{"xref_id":"0014529"}}}


id: PBO:0027360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity_during_vegetative_growth","termid":"PBO:0027360"}


id: PBO:0080781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 1","termid":"PBO:0080781"}


id: MONDO:0054849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 29","secondary_identifiers":["OMIM:618077","UMLS:C4748083","MEDGEN:1648318","DOID:0112155"],"synonyms":[{"name":"IBD29","type":"related"},{"name":"inflammatory bowel disease 29","type":"exact"}],"termid":"MONDO:0054849","xrefs":{"Monarch":{"xref_id":"0054849"}}}


id: GO:2000540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein geranylgeranylation","termid":"GO:2000539"},{"relation_name":"negatively_regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein geranylgeranylation","synonyms":[{"name":"negative regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"negative regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000540"}


id: PBO:0114216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, RNA-binding","termid":"PBO:0114216"}


id: GO:0009505
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A more or less rigid structure lying outside the cell membrane of a cell and composed of cellulose and pectin and other organic and inorganic substances.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"plant-type cell wall","synonyms":[{"name":"cellulose and pectin-containing cell wall","type":"exact"},{"name":"plant cell wall","type":"narrow"}],"termid":"GO:0009505"}


id: PBO:0082441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; also involved in response to DNA damage; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB2 has a paralog, CLB1, that arose from the whole genome duplication","termid":"PBO:0082441"}


id: GO:0045583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytotoxic T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"regulates","term_name":"cytotoxic T cell differentiation","termid":"GO:0045065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cytotoxic T cell differentiation","synonyms":[{"name":"regulation of cytotoxic T cell development","type":"related"},{"name":"regulation of cytotoxic T lymphocyte differentiation","type":"exact"},{"name":"regulation of cytotoxic T-cell differentiation","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045583"}


id: PBO:0056800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056800"}


id: PBO:0064842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12B pseudogene 2","termid":"PBO:0064842"}


id: PBO:0048653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 3","termid":"PBO:0048653"}


id: PBO:0082928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aldehyde dehydrogenase; involved in ethanol oxidation and beta-alanine biosynthesis; uses NAD+ as the preferred coenzyme; expression is stress induced and glucose repressed; very similar to Ald3p","termid":"PBO:0082928"}


id: MOD:01671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using free L-asparagine and releasing ammonia.","definition_xrefs":["PubMed:8706862","RESID:AA0525#THR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (active site intermediate)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-isoaspartyl threonine intermediate","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01671"}


id: GO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of heparan sulfate; can degrade both heparan sulfate and heparin glycosaminoglycan chains.","definition_xrefs":["PMID:10916150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"heparanase activity","secondary_identifiers":["Reactome:R-HSA-1667005"],"synonyms":[{"name":"heparinase activity","type":"related"}],"termid":"GO:0030305"}


id: FYPO:0007059
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to late endosomes is decreased.","definition_xrefs":["PMID:31341193","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endosome","termid":"FYPO:0007587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to late endosome","synonyms":[{"name":"decreased protein localisation to late endosome","type":"exact"},{"name":"decreased protein localization to PVE","type":"exact"},{"name":"decreased protein localization to late endosome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to late endosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to prevacuolar compartment","type":"exact"},{"name":"decreased protein localization to prevacuolar endosome","type":"exact"},{"name":"reduced protein localization to late endosome","type":"exact"}],"termid":"FYPO:0007059"}


id: GO:0050480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-(4-oxo-4,5-dihydro-1H-imidazol-5-yl)propanoic acid + H2O = N-formimidoyl-L-glutamate + H+.","definition_xrefs":["EC:3.5.2.7","RHEA:23660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"imidazolonepropionase activity","secondary_identifiers":["MetaCyc:IMIDAZOLONEPROPIONASE-RXN","KEGG_REACTION:R02288"],"synonyms":[{"name":"3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate amidohydrolase activity","type":"related"},{"name":"4(5)-imidazolone-5(4)-propionic acid hydrolase activity","type":"related"},{"name":"imidazolone propionic acid hydrolase activity","type":"related"},{"name":"imidazolone-5-propionate hydrolase activity","type":"related"}],"termid":"GO:0050480"}


id: PBO:0089188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein, nucleoside-triphosphate diphosphatase, human ASMTL ortholog","termid":"PBO:0089188"}


id: PBO:0056286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEA divergent transcript","termid":"PBO:0056286"}


id: PBO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 23","termid":"PBO:0050206"}


id: PBO:0070208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 136 pseudogene","termid":"PBO:0070208"}


id: PBO:0084796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein involved in lipid homeostasis; involved in mobilization of CoQ from its site of synthesis on the inner mitochondrial membrane to other sites of action; associates with mitochondrial ribosome; involved in mitochondrial morphology; non-essential gene which interacts genetically with MDM10, and other members of ERMES complex; transcription is periodic during metabolic cycle; homologous to human aarF domain containing kinase, ADCK1","termid":"PBO:0084796"}


id: PBO:0083173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF RSC30/YHR056C","termid":"PBO:0083173"}


id: MONDO:0007800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 18p refers to a chromosomal disorder resulting from the deletion of all or part of the short arm of chromosome 18.","definition_xrefs":["Orphanet:1598"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 18","termid":"MONDO:0016880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18p deletion syndrome","secondary_identifiers":["SCTID:270890001","UMLS:C0432442","GARD:8631","OMIM:146390","MESH:C538309","ICD9:758.39","Orphanet:261974","NCIT:C84521","icd11.foundation:121037615","MEDGEN:96604","DOID:0060406"],"synonyms":[{"name":"18p syndrome","type":"exact"},{"name":"18p-","type":"exact"},{"name":"De Grouchy syndrome","type":"exact"},{"name":"chromosome 18p deletion","type":"exact"},{"name":"chromosome 18p deletion syndrome","type":"exact"},{"name":"deletion 18p syndrome","type":"exact"},{"name":"monosomy 18p","type":"exact"},{"name":"monosomy type 18p","type":"exact"},{"name":"partial deletion of chromosome 18p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 18","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 18","type":"exact"},{"name":"partial monosomy of chromosome 18p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 18","type":"exact"}],"termid":"MONDO:0007800","xrefs":{"Monarch":{"xref_id":"0007800"}}}


id: PBO:0083035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase; required for biosynthesis of isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; also has a role in tRNA gene-mediated silencing; gene encodes two isozymic forms; converts to a prion form, prion conversion contributes to azole antifungal resistance by upregulating ergosterol biosynthesis; homolog of human TRIT1, a mutation in which is associated with severe combined respiratory chain defects","termid":"PBO:0083035"}


id: PBO:0041288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1r","termid":"PBO:0041288"}


id: PATO:0000654
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000654 alcochol value (obsolete PATO:0000654)","termid":"PATO:0000654"}


id: GO:1902251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of erythrocyte apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:rl","GOC:TermGenie","PMID:14569084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid cell apoptotic process","termid":"GO:0033033"},{"relation_name":"is_a","term_name":"regulation of erythrocyte apoptotic process","termid":"GO:1902250"},{"relation_name":"negatively_regulates","term_name":"erythrocyte apoptotic process","termid":"GO:1902217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of erythrocyte apoptotic process","synonyms":[{"name":"down regulation of RBC apoptosis","type":"narrow"},{"name":"down regulation of RBC apoptotic process","type":"exact"},{"name":"down regulation of erythrocyte apoptosis","type":"narrow"},{"name":"down regulation of erythrocyte apoptotic process","type":"exact"},{"name":"down regulation of red blood cell apoptosis","type":"narrow"},{"name":"down regulation of red blood cell apoptotic process","type":"exact"},{"name":"down-regulation of RBC apoptosis","type":"narrow"},{"name":"down-regulation of RBC apoptotic process","type":"exact"},{"name":"down-regulation of erythrocyte apoptosis","type":"narrow"},{"name":"down-regulation of erythrocyte apoptotic process","type":"exact"},{"name":"down-regulation of red blood cell apoptosis","type":"narrow"},{"name":"down-regulation of red blood cell apoptotic process","type":"exact"},{"name":"downregulation of RBC apoptosis","type":"narrow"},{"name":"downregulation of RBC apoptotic process","type":"exact"},{"name":"downregulation of erythrocyte apoptosis","type":"narrow"},{"name":"downregulation of erythrocyte apoptotic process","type":"exact"},{"name":"downregulation of red blood cell apoptosis","type":"narrow"},{"name":"downregulation of red blood cell apoptotic process","type":"exact"},{"name":"inhibition of RBC apoptosis","type":"narrow"},{"name":"inhibition of RBC apoptotic process","type":"narrow"},{"name":"inhibition of erythrocyte apoptosis","type":"narrow"},{"name":"inhibition of erythrocyte apoptotic process","type":"narrow"},{"name":"inhibition of red blood cell apoptosis","type":"narrow"},{"name":"inhibition of red blood cell apoptotic process","type":"narrow"},{"name":"negative regulation of RBC apoptosis","type":"narrow"},{"name":"negative regulation of RBC apoptotic process","type":"exact"},{"name":"negative regulation of erythrocyte apoptosis","type":"narrow"},{"name":"negative regulation of red blood cell apoptosis","type":"narrow"},{"name":"negative regulation of red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902251"}


id: PBO:0072124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 1","termid":"PBO:0072124"}


id: GO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dystroglycan, a glycoprotein found in non-muscle tissues as well as in muscle tissues, often in association with dystrophin. The native dystroglycan cleaved into two non-covalently associated subunits, alpha (N-terminal) and beta (C-terminal).","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"dystroglycan binding","secondary_identifiers":["GO:0002166","GO:0002163"],"synonyms":[{"name":"alpha-dystroglycan binding","type":"narrow"},{"name":"beta-dystroglycan binding","type":"narrow"}],"termid":"GO:0002162"}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["PMID:22683681","ISBN:0198506732","GOC:aruk","GOC:jl","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: MONDO:1011193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis, non-human animal","termid":"MONDO:1010305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis, rabbit","secondary_identifiers":["OMIA:001224-9986"],"termid":"MONDO:1011193","xrefs":{"Monarch":{"xref_id":"1011193"}}}


id: MONDO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A punctate palmoplantar keratoderma that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated punctate palmoplantar keratoderma (obsolete MONDO:0016518)","secondary_identifiers":["Orphanet:2338"],"synonyms":[{"name":"isolated punctate PPK","type":"exact"},{"name":"isolated punctate palmoplantar hyperkeratosis","type":"exact"},{"name":"nonsyndromic punctate palmoplantar keratoderma","type":"exact"}],"termid":"MONDO:0016518","xrefs":{"Monarch":{"xref_id":"0016518"}}}


id: MONDO:0016497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraparetic variant of Guillain-Barré syndrome is a rare variant of Guillain-Barré syndrome characterized by isolated leg weakness, areflexia and radicular leg pain that may simulate a cauda equina or spinal cord syndrome. The arms, ocular, facial, and oropharyngeal muscles are spared, and sphincteric function is normal.","definition_xrefs":["Orphanet:231445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"paraparetic variant of Guillain-Barre syndrome","secondary_identifiers":["UMLS:C4707803","GARD:20615","MEDGEN:1644763"],"synonyms":[{"name":"paraparetic variant of GBS","type":"exact"},{"name":"paraparetic variant of Guillain-Barré syndrome","type":"related"}],"termid":"MONDO:0016497","xrefs":{"Monarch":{"xref_id":"0016497"}}}


id: MONDO:0013972
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87550],"is_not":false,"summary":null,"term":"MONDO:0013972"}]},"cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the HARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0006025","MONDO:0005066","MONDO:0005047"],"is_obsolete":false,"name":"Perrault syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614926","MEDGEN:767019","Orphanet:642976","UMLS:C3554105","GARD:15882"],"synonyms":[{"name":"HARS2 Perrault syndrome","type":"exact"},{"name":"PRLTS2","type":"related"},{"name":"Perrault syndrome 2","type":"exact"},{"name":"Perrault syndrome caused by mutation in HARS2","type":"exact"},{"name":"Perrault syndrome type 2","type":"exact"}],"termid":"MONDO:0013972","terms_by_termid":{"MONDO:0013972":null},"xrefs":{"Monarch":{"xref_id":"0013972"}}}


id: GO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole of an oocyte, egg or early embryo that will be inherited by the cells that will give rise to the germ line.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm","termid":"GO:0045495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"germ plasm","secondary_identifiers":["Wikipedia:Germ_plasm"],"termid":"GO:0060293"}


id: PBO:0062398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 21 pseudogene","termid":"PBO:0062398"}


id: GO:0120301
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id: GO:0038093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of an immunoglobulin to an Fc receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:phg","Wikipedia:Fc_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway","termid":"GO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc receptor signaling pathway","synonyms":[{"name":"Fc receptor signalling pathway","type":"exact"}],"termid":"GO:0038093"}


id: GO:1900606
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id: MONDO:0056803
data:
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id: PBO:0088747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Gsf1","termid":"PBO:0088747"}


id: MONDO:0016678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maternal disease-related embryofetopathy (obsolete MONDO:0016678)","secondary_identifiers":["Orphanet:251535"],"termid":"MONDO:0016678","xrefs":{"Monarch":{"xref_id":"0016678"}}}


id: FYPO:0004149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxal kinase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal pyridoxal kinase activity","termid":"FYPO:0004149"}


id: PBO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human FAM32A homolog","termid":"PBO:0001837"}


id: PBO:0067196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 260, pseudogene","termid":"PBO:0067196"}


id: MONDO:0004603
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder","termid":"MONDO:0003900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagenopathy","termid":"MONDO:0004603","xrefs":{"Monarch":{"xref_id":"0004603"}}}


id: GO:0047211
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP-D-glucose + protein = alpha-D-glucosyl-protein + ADP.","definition_xrefs":["EC:2.4.1.113","MetaCyc:2.4.1.113-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alpha-1,4-glucan-protein synthase (ADP-forming) activity","synonyms":[{"name":"1,4alpha-glucan-protein synthase (ADP-forming) activity","type":"exact"},{"name":"ADP-glucose:protein 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"ADPglucose:protein 4-alpha-D-glucosyltransferase activity","type":"related"},{"name":"ADPglucose:protein glucosyltransferase activity","type":"related"},{"name":"adenosine diphosphoglucose-protein glucosyltransferase activity","type":"related"}],"termid":"GO:0047211"}


id: PBO:0081203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 4","termid":"PBO:0081203"}


id: PBO:0069610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 887, pseudogene","termid":"PBO:0069610"}


id: MONDO:0000173
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316","SJAG_01491","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87018,87017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy","termid":"MONDO:0018276"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, type C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:609308"],"termid":"MONDO:0000173","terms_by_termid":{"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0000173"}}}


id: MONDO:0000157
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete episodic pain syndrome, familial (obsolete MONDO:0000157)","termid":"MONDO:0000157","xrefs":{"Monarch":{"xref_id":"0000157"}}}


id: GO:0032466
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id: FYPO:0000295
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119800],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[119898,119746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119732],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119603],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119571,119815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119801],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects cytoskeleton organization. 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id: GO:2000236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of tRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"is_a","term_name":"regulation of tRNA processing","termid":"GO:2000235"},{"relation_name":"negatively_regulates","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tRNA processing","synonyms":[{"name":"negative regulation of tRNA maturation","type":"exact"}],"termid":"GO:2000236"}


id: FYPO:0001080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered polysaccharide level during vegetative growth","termid":"FYPO:0001085"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased polysaccharide level during vegetative growth","synonyms":[{"name":"decreased cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"decreased polysaccharide accumulation during vegetative growth","type":"related"},{"name":"decreased polysaccharide level during mitotic cell cycle","type":"related"},{"name":"reduced polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001080"}


id: MONDO:0859515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 10b, mild variant","secondary_identifiers":["OMIM:620249","MEDGEN:762102","UMLS:C3541476","DOID:0081345"],"termid":"MONDO:0859515","xrefs":{"Monarch":{"xref_id":"0859515"}}}


id: PBO:0051354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-7 (pseudogene)","termid":"PBO:0051354"}


id: GO:0031958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a corticosteroid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12606724","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"nuclear receptor-mediated corticosteroid signaling pathway","synonyms":[{"name":"corticosteroid receptor signalling pathway","type":"broad"},{"name":"intracellular corticosteroid receptor signaling pathway","type":"exact"}],"termid":"GO:0031958"}


id: GO:1902633
data:
  {"annotated_genes":["SJAG_00053","SJAG_02613","SJAG_01863","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[104694,90751],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[117832],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:22562153","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01863":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolism","type":"exact"}],"termid":"GO:1902633","terms_by_termid":{"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PBO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 2","termid":"PBO:0070408"}


id: PR:Q9UT07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PRELI domain-containing protein 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11158:SF16","OMA:SCHPO02214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ups1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.10","secondary_identifiers":["UniProtKB:Q9UT07"],"synonyms":[{"name":"Spom972h-PRELID1","type":"exact"}],"termid":"PR:Q9UT07"}


id: PBO:0052666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 34","termid":"PBO:0052666"}


id: MONDO:0006132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare low grade carcinoma that arises from the cervix. It is characterized by the presence of nests of basaloid cells with focal glandular formations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin adenoid basal cell carcinoma","termid":"MONDO:0002951"},{"relation_name":"is_a","term_name":"cervical squamous cell carcinoma","termid":"MONDO:0006143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"cervical adenoid basal carcinoma","secondary_identifiers":["Orphanet:213828","ONCOTREE:CABC","NCIT:C40213","ICD10CM:C53.0","DOID:6428","GARD:20499","EFO:1000160","UMLS:C1516403","MEDGEN:275704"],"synonyms":[{"name":"adenoid basal carcinoma of the cervix uteri","type":"exact"},{"name":"cervical adenoid basal cancer","type":"exact"},{"name":"cervical adenoid basal carcinoma","type":"exact"},{"name":"skin adenoid basal cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix skin adenoid basal cell carcinoma","type":"exact"}],"termid":"MONDO:0006132","xrefs":{"Monarch":{"xref_id":"0006132"}}}


id: PBO:0042480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 6","termid":"PBO:0042480"}


id: PBO:0049111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 173","termid":"PBO:0049111"}


id: PBO:0071891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 29","termid":"PBO:0071891"}


id: MONDO:0005289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the paranasal sinuses. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C7488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranasal sinus neoplasm","secondary_identifiers":["SCTID:126675008","HP:0030072","MEDGEN:18296","DOID:1350","UMLS:C0030470","EFO:0003866"],"synonyms":[{"name":"accessory sinus neoplasm","type":"exact"},{"name":"accessory sinus tumor","type":"exact"},{"name":"accessory sinus tumour","type":"exact"},{"name":"neoplasm of accessory sinus","type":"exact"},{"name":"neoplasm of paranasal sinus","type":"exact"},{"name":"neoplasm of the accessory sinus","type":"exact"},{"name":"neoplasm of the paranasal sinus","type":"exact"},{"name":"paranasal sinus neoplasm","type":"exact"},{"name":"paranasal sinus neoplasm (disease)","type":"exact"},{"name":"paranasal sinus neoplasms","type":"exact"},{"name":"paranasal sinus tumor","type":"exact"},{"name":"paranasal sinus tumour","type":"exact"},{"name":"tumor of accessory sinus","type":"exact"},{"name":"tumor of paranasal sinus","type":"exact"},{"name":"tumor of the accessory sinus","type":"exact"},{"name":"tumor of the paranasal sinus","type":"exact"},{"name":"tumour of accessory sinus","type":"exact"},{"name":"tumour of paranasal sinus","type":"exact"},{"name":"tumour of the accessory sinus","type":"exact"},{"name":"tumour of the paranasal sinus","type":"exact"}],"termid":"MONDO:0005289","xrefs":{"Monarch":{"xref_id":"0005289"}}}


id: PBO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial threonine-tRNA ligase (predicted)","termid":"PBO:0001862"}


id: PBO:0078716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 1-1","termid":"PBO:0078716"}


id: PBO:0030581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_asparagine_level","termid":"PBO:0030581"}


id: PBO:0091236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Con-6 family conserved fungal protein","termid":"PBO:0091236"}


id: SO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from nucleomorph sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"nucleomorphic_sequence","termid":"SO:0000739"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorph_gene","synonyms":[{"name":"nucleomorph gene","type":"exact"}],"termid":"SO:0000097"}


id: PBO:0058206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4499","termid":"PBO:0058206"}


id: PBO:0090765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Mei3 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090765"}


id: FYPO:0007467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which trimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal during G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"},{"relation_name":"is_a","term_name":"abnormal histone modification during G0","termid":"FYPO:0007470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during G0","synonyms":[{"name":"increased histone H3 K9 methylation during G0","type":"exact"},{"name":"increased histone H3-K9 methylation during cell quiescence","type":"exact"},{"name":"increased histone H3-K9 methylation during quiescence","type":"exact"},{"name":"increased histone H3K9me during G0","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during G0","type":"exact"}],"termid":"FYPO:0007467"}


id: GO:0048238
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the smooth endoplasmic reticulum.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum lumen","termid":"GO:0005788"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"smooth endoplasmic reticulum lumen","secondary_identifiers":["NIF_Subcellular:sao927884761"],"synonyms":[{"name":"SER lumen","type":"exact"},{"name":"smooth ER lumen","type":"exact"}],"termid":"GO:0048238"}


id: GO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of a cell in the epidermis resulting in the formation of the mammary line. The mammary line is a ridge of epidermal cells that will form the mammary placodes.","definition_xrefs":["GOC:dph","PMID:16168142"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in mammary gland specification (obsolete GO:0060593)","synonyms":[{"name":"Wnt receptor signaling pathway involved in mammary gland specification","type":"exact"},{"name":"Wnt receptor signalling pathway involved in mammary gland specification","type":"exact"},{"name":"Wnt-activated signaling pathway involved in mammary gland specification","type":"exact"}],"termid":"GO:0060593"}


id: PBO:0087310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small plasma membrane protein; confers resistance to amphotericin B and is a potential target of this common antifungal drug; related to a family of plant polypeptides that are overexpressed under high salt concentration or low temperature; not essential for viability; deletion causes hyperpolarization of the plasma membrane potential","termid":"PBO:0087310"}


id: GO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance released by symbiont from symbiotic structure (obsolete GO:0085002)","termid":"GO:0085002"}


id: GO:0042078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell to produce a daughter stem cell and a daughter germ cell, which will divide to form the gametes.","definition_xrefs":["PMID:2279698","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem cell division","secondary_identifiers":["GO:0048131"],"synonyms":[{"name":"germ-line stem cell renewal","type":"exact"}],"termid":"GO:0042078"}


id: GO:1901328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytochalasin B stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytochalasin B","termid":"GO:1901328"}


id: MONDO:0024558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome in which the cause of the disease is a mutation in the HOXA11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome","termid":"MONDO:0011555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005570"],"is_obsolete":false,"name":"radioulnar synostosis with amegakaryocytic thrombocytopenia 1","secondary_identifiers":["UMLS:C4551975","GARD:18068","OMIM:605432","MEDGEN:1637913"],"synonyms":[{"name":"HOXA11 radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome","type":"exact"},{"name":"RUSAT1","type":"related"},{"name":"Rusat","type":"related"},{"name":"radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome caused by mutation in HOXA11","type":"exact"},{"name":"radioulnar synostosis with amegakaryocytic thrombocytopenia 1","type":"exact"},{"name":"thrombocytopenia, congenital, with radioulnar synostosis","type":"related"}],"termid":"MONDO:0024558","xrefs":{"Monarch":{"xref_id":"0024558"}}}


id: PBO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 188","termid":"PBO:0061689"}


id: GO:0033361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lysine, via the intermediate diaminopimelate; in this pathway tetrahydrodipicolinate is converted to meso-diaminopimelate in a single enzymatic step.","definition_xrefs":["GOC:pr","MetaCyc:PWY-2942","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine biosynthetic process via diaminopimelate","termid":"GO:0009089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"lysine biosynthetic process via diaminopimelate, dehydrogenase pathway","synonyms":[{"name":"lysine anabolism via diaminopimelate, dehydrogenase pathway","type":"exact"},{"name":"lysine biosynthesis via diaminopimelic acid, dehydrogenase pathway","type":"exact"},{"name":"lysine formation via diaminopimelate, dehydrogenase pathway","type":"exact"},{"name":"lysine synthesis via diaminopimelate, dehydrogenase pathway","type":"exact"}],"termid":"GO:0033361"}


id: PBO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase (predicted)","termid":"PBO:0005191"}


id: PBO:0067666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 845, pseudogene","termid":"PBO:0067666"}


id: MONDO:0008725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital lipoid adrenal hyperplasia (CLAH) is one of the most severe forms of congenital adrenal hyperplasia (CAH) characterized by severe adrenal insufficiency and sex reversal in males.","definition_xrefs":["Orphanet:90790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"congenital lipoid adrenal hyperplasia due to STAR deficency","secondary_identifiers":["MEDGEN:83341","GARD:1465","SCTID:44231009","UMLS:C0342474","OMIM:201710"],"synonyms":[{"name":"CLAH","type":"exact"},{"name":"LCAH","type":"related"},{"name":"adrenal hyperplasia 1","type":"related"},{"name":"congenital adrenal hyperplasia lipoid","type":"related"},{"name":"lipoid adrenal hyperplasia","type":"exact"},{"name":"lipoid congenital adrenal hyperplasia","type":"related"},{"name":"lipoid hyperplasia, congenital, of adrenal cortex with Male pseudohermaphroditism","type":"related"}],"termid":"MONDO:0008725","xrefs":{"Monarch":{"xref_id":"0008725"}}}


id: PBO:0089228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit","termid":"PBO:0089228"}


id: PBO:0066416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renin binding protein","termid":"PBO:0066416"}


id: PBO:0049050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 45","termid":"PBO:0049050"}


id: PBO:0065037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 2","termid":"PBO:0065037"}


id: PBO:0061222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar and coiled-body phosphoprotein 1","termid":"PBO:0061222"}


id: PBO:0041617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 2","termid":"PBO:0041617"}


id: PBO:0073294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 16","termid":"PBO:0073294"}


id: PBO:0067255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 329, pseudogene","termid":"PBO:0067255"}


id: PBO:0005428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1, Rgf1","termid":"PBO:0005428"}


id: MONDO:0009923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder of sex development (DSD) due to a defect in metabolizing testosterone to dihydrotestosterone and characterized by incomplete intrauterine masculinization which ranges from a female genitalia with a blind vaginal pouch to a fully male phenotype with pseudovaginal posterior hypospadias and micropenis.","definition_xrefs":["Orphanet:753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"46,XY disorder of sex development due to 5-alpha-reductase 2 deficiency","secondary_identifiers":["NANDO:2200389","OMIM:264600","MedDRA:10000029","SCTID:57514000","UMLS:C0268297","icd11.foundation:1028755501","MEDGEN:75667","MESH:C535830","NCIT:C98699","GARD:5680"],"synonyms":[{"name":"3-oxo-5 Alpha-steroid Delta 4-dehydrogenase deficiency","type":"exact"},{"name":"46,XY DSD due to 5-alpha-reductase 2 deficiency","type":"exact"},{"name":"46,XY disorder of sex development due to 5-alpha-reductase 2 deficiency","type":"exact"},{"name":"5 Alpha steroid reductase 2 deficiency","type":"exact"},{"name":"5-alpha reductase deficiency","type":"related"},{"name":"Male pseudohermaphroditism due to 5-Alpha-reductase deficiency","type":"related"},{"name":"Male pseudohermaphroditism due to 5-alpha-reductase 2 deficiency","type":"exact"},{"name":"PPSH","type":"related"},{"name":"familial incomplete Male pseudohermaphroditism, type 2","type":"related"},{"name":"micropenis","type":"related"},{"name":"pseudovaginal perineoscrotal hypospadias","type":"exact"},{"name":"steroid 5-alpha-reductase deficiency","type":"exact"}],"termid":"MONDO:0009923","xrefs":{"Monarch":{"xref_id":"0009923"}}}


id: PBO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase Plr1","termid":"PBO:0002527"}


id: PBO:0027267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_cellular_response_to_pheromone","termid":"PBO:0027267"}


id: MONDO:0018678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"polyclonal hyperviscosity syndrome","secondary_identifiers":["ICD10CM:D89.0","GARD:21887","Orphanet:450322","MEDGEN:1814466","UMLS:C5681102"],"termid":"MONDO:0018678","xrefs":{"Monarch":{"xref_id":"0018678"}}}


id: PBO:0062230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 3","termid":"PBO:0062230"}


id: PATO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased life span","synonyms":[{"name":"low life span","type":"exact"}],"termid":"PATO:0001604"}


id: MONDO:0021311
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"}]},"cv_name":"mondo","definition":"A cancer that involves the parathyroid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"tumor of parathyroid gland","termid":"MONDO:0021360"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant tumor of parathyroid gland","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C9322","ICD9:194.1","ONCOTREE:PTH","SCTID:363481002","UMLS:C0153653","MEDGEN:102283"],"synonyms":[{"name":"cancer of parathyroid gland","type":"exact"},{"name":"malignant neoplasm of parathyroid","type":"exact"},{"name":"malignant neoplasm of parathyroid gland","type":"exact"},{"name":"malignant neoplasm of the parathyroid","type":"exact"},{"name":"malignant neoplasm of the parathyroid gland","type":"exact"},{"name":"malignant parathyroid gland neoplasm","type":"exact"},{"name":"malignant parathyroid gland tumor","type":"exact"},{"name":"malignant parathyroid gland tumour","type":"exact"},{"name":"malignant parathyroid neoplasm","type":"exact"},{"name":"malignant parathyroid tumor","type":"exact"},{"name":"malignant parathyroid tumour","type":"exact"},{"name":"malignant tumor of parathyroid","type":"exact"},{"name":"malignant tumor of the parathyroid","type":"exact"},{"name":"malignant tumor of the parathyroid gland","type":"exact"},{"name":"malignant tumour of parathyroid","type":"exact"},{"name":"malignant tumour of the parathyroid","type":"exact"},{"name":"malignant tumour of the parathyroid gland","type":"exact"},{"name":"parathyroid cancer","type":"exact"},{"name":"parathyroid gland cancer","type":"exact"}],"termid":"MONDO:0021311","terms_by_termid":{"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0021311"}}}


id: GO:0036176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to neutral pH","termid":"GO:0036176"}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: PBO:0064207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen activator, tissue type","termid":"PBO:0064207"}


id: GO:0033444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"AAG codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033444"}


id: PBO:0027377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_nuclear_pore_aggregation_in_cytoplasm_during_mitotic_telophase","termid":"PBO:0027377"}


id: MONDO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute myocarditis","termid":"MONDO:0002815"},{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Fiedler's myocarditis","secondary_identifiers":["SCTID:266238009","ICD10CM:I40.1","UMLS:C0155689","DOID:10778","MEDGEN:510047","ICD9:422.91"],"synonyms":[{"name":"fiedler myocarditis","type":"exact"},{"name":"idiopathic myocarditis","type":"exact"},{"name":"isolated (Fiedler's) myocarditis","type":"exact"}],"termid":"MONDO:0001113","xrefs":{"Monarch":{"xref_id":"0001113"}}}


id: PBO:0050094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 4","termid":"PBO:0050094"}


id: MONDO:0054731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 27","secondary_identifiers":["DOID:0111928","OMIM:617965","UMLS:C4693784","GARD:18405","MEDGEN:1634748"],"synonyms":[{"name":"SPGF27","type":"related"},{"name":"spermatogenic failure 27","type":"exact"}],"termid":"MONDO:0054731","xrefs":{"Monarch":{"xref_id":"0054731"}}}


id: GO:0031346
data:
  {"annotated_genes":["SJAG_02379","SJAG_01794","SJAG_00514","SJAG_03453","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88236,93822,111673,90208,91187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell projection organization","type":"narrow"},{"name":"positive regulation of cell projection organisation","type":"exact"},{"name":"positive regulation of cell projection organization and biogenesis","type":"related"},{"name":"stimulation of cell projection organization","type":"narrow"},{"name":"up regulation of cell projection organization","type":"exact"},{"name":"up-regulation of cell projection organization","type":"exact"},{"name":"upregulation of cell projection organization","type":"exact"}],"termid":"GO:0031346","terms_by_termid":{"GO:1902917":null}}


id: PBO:0053852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1121","termid":"PBO:0053852"}


id: PBO:0036554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant C2 domain protein, human FAM102A and FAM102B ortholog","termid":"PBO:0036554"}


id: MONDO:0035942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with t(12;21)(p13.2;q22.1)","secondary_identifiers":["Orphanet:585929","NCIT:C80334","GARD:22344"],"synonyms":[{"name":"B lymphoblastic leukaemia lymphoma with t(12;21)(p13;q22); TEL-AML1","type":"exact"},{"name":"B lymphoblastic leukemia lymphoma with t(12;21)(p13;q22); TEL-AML1","type":"exact"},{"name":"B-lymphoblastic leukemia/lymphoma with t(12;21)(p13.2;q22.1); ETV6-RUNX1","type":"exact"}],"termid":"MONDO:0035942","xrefs":{"Monarch":{"xref_id":"0035942"}}}


id: MONDO:0100198
data:
  {"annotated_genes":["SJAG_01537","SJAG_04074","SJAG_02384","SJAG_02462","SJAG_02520","SJAG_01271","SJAG_04618","SJAG_02848","SJAG_02896","SJAG_03669"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044646"},{"annotations":[85882,85881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013726"},{"annotations":[85605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060562"},{"annotations":[87439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958224"},{"annotations":[87537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020781"},{"annotations":[86421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032681"},{"annotations":[87615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011953"},{"annotations":[86411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0034121"},{"annotations":[86632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014402"}]},"cv_name":"mondo","definition":"An instance of encephalopathy that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_01537":null,"SJAG_02384":null,"SJAG_02462":null,"SJAG_02520":null,"SJAG_02848":null,"SJAG_02896":null,"SJAG_03669":null,"SJAG_04074":null,"SJAG_04618":null},"genotype_count":0,"is_obsolete":false,"name":"Mendelian encephalopathy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100198","terms_by_termid":{"MONDO:0011953":null,"MONDO:0013726":null,"MONDO:0014402":null,"MONDO:0020781":null,"MONDO:0032681":null,"MONDO:0034121":null,"MONDO:0044646":null,"MONDO:0060562":null,"MONDO:0958224":null},"xrefs":{"Monarch":{"xref_id":"0100198"}}}


id: PBO:0082462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcineurin A; one isoform (the other is Cna1p) of the catalytic subunit of calcineurin, a Ca++/calmodulin-regulated protein phosphatase which regulates Crz1p (a stress-response transcription factor), the other calcineurin subunit is CNB1; regulates the function of Aly1p alpha-arrestin; CMP2 has a paralog, CNA1, that arose from the whole genome duplication","termid":"PBO:0082462"}


id: MOD:01331
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 6x(13)C labeled L-arginine.","definition_xrefs":["PubMed:12716131","OMSSA:136","Unimod:188#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-arginine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"},{"name":"arg-13c6","type":"exact"}],"termid":"MOD:01331"}


id: PBO:0046395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPB41L1 antisense RNA 1","termid":"PBO:0046395"}


id: MONDO:0012340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 2","secondary_identifiers":["OMIM:609754","MEDGEN:347564","UMLS:C1857846"],"synonyms":[{"name":"CELIAC2","type":"exact"},{"name":"celiac disease, susceptibility to, 2","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 2","type":"related"}],"termid":"MONDO:0012340","xrefs":{"Monarch":{"xref_id":"0012340"}}}


id: PR:O74394
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L33, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L39, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.08c","secondary_identifiers":["UniProtKB:O74394"],"synonyms":[{"name":"SPBC4F6.08c","type":"related"},{"name":"Spom972h-MRPL33","type":"exact"}],"termid":"PR:O74394"}


id: PBO:0055787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loricrin cornified envelope precursor protein","termid":"PBO:0055787"}


id: PBO:0079334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 20","termid":"PBO:0079334"}


id: PBO:0030041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_iron_starvation","termid":"PBO:0030041"}


id: GO:1900561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dehydroaustinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"dehydroaustinol metabolic process","synonyms":[{"name":"dehydroaustinol metabolism","type":"exact"}],"termid":"GO:1900561"}


id: GO:0018799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ = CO2 + phenol.","definition_xrefs":["RHEA:10876","EC:4.1.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r0159","KEGG_REACTION:R01238","MetaCyc:4-HYDROXYBENZOATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"4-hydroxybenzoate carboxy-lyase (phenol-forming)","type":"related"},{"name":"4-hydroxybenzoate carboxy-lyase activity","type":"related"},{"name":"p-hydroxybenzoate decarboxylase activity","type":"related"}],"termid":"GO:0018799"}


id: PR:O94486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfh2 gene.","definition_xrefs":["UniProtKB:O94486","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.05c","synonyms":[{"name":"Chs four homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfh2","type":"exact"}],"termid":"PR:O94486"}


id: FYPO:0003423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial RNA measured in a cell is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level in mitochondrion","termid":"FYPO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitochondrial RNA level","synonyms":[{"name":"decreased RNA level in mitochondrion","type":"exact"},{"name":"decreased mitochondrial RNA accumulation","type":"related"},{"name":"decreased mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transcript level","type":"exact"},{"name":"reduced mitochondrial RNA level","type":"exact"}],"termid":"FYPO:0003423"}


id: GO:1901493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a decalin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to decalin","termid":"GO:1901493"}


id: MONDO:0003940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that presents as vertebral osteonecrosis typically affecting a thoracic vertebra with compression deformity, intravertebral vacuum cleft, and exaggerated kyphosis weeks to months after a minor traumatic injury.","definition_xrefs":["PMID:23814399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy","termid":"MONDO:0005095"},{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"vertebral disorder","termid":"MONDO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Kummell disease","secondary_identifiers":["ICD9:721.7","UMLS:C0152088","SCTID:111232005","MEDGEN:508880","ICD10CM:M48.3","DOID:6603"],"synonyms":[{"name":"Kummell disease","type":"exact"},{"name":"Kummell's disease","type":"exact"},{"name":"Kummell's spondylitis","type":"exact"},{"name":"avascular necrosis of a vertebral body","type":"exact"},{"name":"bony vertebral centrum osteonecrosis","type":"exact"},{"name":"osteonecrosis of bony vertebral centrum","type":"exact"},{"name":"traumatic spondylopathy","type":"exact"}],"termid":"MONDO:0003940","xrefs":{"Monarch":{"xref_id":"0003940"}}}


id: PBO:0068121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 428","termid":"PBO:0068121"}


id: MONDO:0010119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Glanzmann's thrombasthenia (obsolete MONDO:0010119)","secondary_identifiers":["NANDO:2200657","NANDO:2200664"],"termid":"MONDO:0010119","xrefs":{"Monarch":{"xref_id":"0010119"}}}


id: PBO:0078377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triggering receptor expressed on myeloid cells like 1","termid":"PBO:0078377"}


id: PR:O74957
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ago1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein argonaute (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.11","synonyms":[{"name":"PAZ Piwi domain protein ago1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA interference pathway protein ago1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ago1","type":"exact"},{"name":"cell cycle control protein ago1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 2C 2-like protein ago1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein slicer (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74957"}


id: MONDO:0000249
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011","SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85838,85839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008964"},{"annotations":[85670,85671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009635"}]},"cv_name":"mondo","definition":"Watery voluminous diarrhea resulting from an imbalance between ion and water secretion and absorption.","definition_xrefs":["HP:0005208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"secretory diarrhea","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:15699003","MEDGEN:75635","UMLS:C0267557","DOID:0050129"],"termid":"MONDO:0000249","terms_by_termid":{"MONDO:0008964":null,"MONDO:0009635":null},"xrefs":{"Monarch":{"xref_id":"0000249"}}}


id: PBO:0081847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 780B","termid":"PBO:0081847"}


id: GO:0060998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dendritic spine development, the process whose specific outcome is the progression of the dendritic spine over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"dendritic spine development","termid":"GO:0060996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic spine development","termid":"GO:0060998"}


id: MONDO:0014561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylglutaconic aciduria, type VIIB","secondary_identifiers":["DOID:0110003","Orphanet:445038","OMIM:616271","SCTID:764860006","UMLS:C5676893","GARD:17767","DOID:0081134","MEDGEN:1810214"],"synonyms":[{"name":"3-METHYLGLUTACONIC aciduria with cataracts, neurologic involvement, and neutropenia","type":"related"},{"name":"3-Methylglutaconic aciduria, type 7","type":"related"},{"name":"3-methylglutaconic aciduria type 7","type":"exact"},{"name":"3-methylglutaconic aciduria type VII","type":"exact"},{"name":"3-methylglutaconic aciduria with cataracts, neurologic involvement and neutropenia","type":"exact"},{"name":"3-methylglutaconic aciduria, type VII, with cataracts, neurologic involvement and neutropenia","type":"exact"},{"name":"3-methylglutaconic aciduria-cataract-neurologic involvement-neutropenia syndrome","type":"exact"},{"name":"CLPB 3-methylglutaconic aciduria","type":"exact"},{"name":"MEGCANN","type":"exact"},{"name":"MGA7","type":"exact"},{"name":"MGCA7","type":"exact"}],"termid":"MONDO:0014561","xrefs":{"Monarch":{"xref_id":"0014561"}}}


id: MONDO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare epithelial tumor of liver and intrahepatic biliary tract (obsolete MONDO:0018530)","secondary_identifiers":["Orphanet:424933"],"synonyms":[{"name":"rare epithelial tumor of liver and IBT","type":"exact"}],"termid":"MONDO:0018530","xrefs":{"Monarch":{"xref_id":"0018530"}}}


id: GO:0070893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a transposable element is incorporated into another DNA molecule such as a chromosome.","definition_xrefs":["PMID:10882723","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete transposon integration (obsolete GO:0070893)","termid":"GO:0070893"}


id: PBO:0016991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016991"}


id: GO:0019362
data:
  {"annotated_genes":["SJAG_06621","SJAG_00027","SJAG_02009","SJAG_00839","SJAG_03669","SJAG_00461","SJAG_00501","SJAG_03852","SJAG_02853","SJAG_04048","SJAG_02107","SJAG_02889","SJAG_00957","SJAG_03091","SJAG_00633","SJAG_02297","SJAG_02148","SJAG_02135","SJAG_01582","SJAG_05314","SJAG_02618","SJAG_01566","SJAG_00070","SJAG_04467","SJAG_02945","SJAG_03174","SJAG_01310","SJAG_01500","SJAG_03298","SJAG_03660","SJAG_04693","SJAG_02369","SJAG_02796","SJAG_00605","SJAG_03903","SJAG_00685","SJAG_02462","SJAG_03934","SJAG_01824","SJAG_06622","SJAG_00522","SJAG_03946","SJAG_02154","SJAG_04263","SJAG_02696","SJAG_03828","SJAG_04495","SJAG_04362","SJAG_03373","SJAG_04192","SJAG_02191","SJAG_02785","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78210,98592,103956,109706,116650,109705,105780,95350,109704,105778,106149,109707,109703,94861,106148,109701,109702,103700,105779,98321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[96891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[77806,75100,113392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[80285,99668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[72570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[58520,67010,69422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[72572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[95445,95444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"},{"annotations":[80207,71445,78296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[72573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[74217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006739"},{"annotations":[76377,73408],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[66446,103751,89648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[109926,90991,89360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[68385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006098"},{"annotations":[73453,74087,104671,74878,108743],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[73419,98511,97313,80742,97224],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0009051"},{"annotations":[90032],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[70420],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[76376],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic 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id: PBO:0051897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 6","termid":"PBO:0051897"}


id: PBO:0065967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 associated protein 2","termid":"PBO:0065967"}


id: PBO:0046583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 25","termid":"PBO:0046583"}


id: MONDO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple sclerosis-ichthyosis-factor VIII deficiency syndrome is characterized by the association of multiple sclerosis with lamellar ichthyosis and hematological anomalies (beta thalassemia minor and a quantitative deficit of factor VIII-von Willebrand complex). Other clinical manifestations may include eye involvement (optic atrophy, diplopia), neuromuscular involvement (ataxia, pyramidal syndrome, gait disturbance) and sensory disorder. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:3151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"multiple sclerosis-ichthyosis-factor VIII deficiency syndrome","secondary_identifiers":["GARD:18787","MEDGEN:1391655","UMLS:C4518551"],"termid":"MONDO:0017837","xrefs":{"Monarch":{"xref_id":"0017837"}}}


id: GO:0003992
data:
  {"annotated_genes":["SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62508],"is_not":false,"summary":null,"term":"GO:0003992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + N(2)-acetyl-L-ornithine = N-acetyl-L-glutamate 5-semialdehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.11","RHEA:18049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["GO:0047318","KEGG_REACTION:R02283","MetaCyc:ACETYLORNTRANSAM-RXN"],"synonyms":[{"name":"2-N-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","type":"related"},{"name":"ACOAT activity","type":"related"},{"name":"N(2)-acetylornithine 5-transaminase activity","type":"related"},{"name":"N-acetylornithine aminotransferase activity","type":"related"},{"name":"N-acetylornithine-delta-transaminase activity","type":"related"},{"name":"N2-acetyl-L-ornithine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N2-acetylornithine 5-aminotransferase activity","type":"exact"},{"name":"N2-acetylornithine 5-transaminase activity","type":"related"},{"name":"acetylornithine 5-aminotransferase activity","type":"related"},{"name":"acetylornithine aminotransferase activity","type":"broad"},{"name":"acetylornithine delta-transaminase activity","type":"related"},{"name":"acetylornithine transaminase activity","type":"broad"},{"name":"succinylornithine aminotransferase activity","type":"broad"}],"termid":"GO:0003992","terms_by_termid":{"GO:0003992":null}}


id: MONDO:0013853
data:
  {"annotated_genes":["SJAG_04321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86662],"is_not":false,"summary":null,"term":"MONDO:0013853"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the EXOSC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 1","termid":"MONDO:0016396"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0006025","MONDO:0020022","MONDO:0037792"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 1B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553449","DOID:0060266","GARD:15834","OMIM:614678","MEDGEN:766363"],"synonyms":[{"name":"EXOSC3 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"PCH1B","type":"related"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in EXOSC3","type":"exact"},{"name":"pontocerebellar hypoplasia type 1B","type":"exact"},{"name":"pontocerebellar hypoplasia, type 1B","type":"related"}],"termid":"MONDO:0013853","terms_by_termid":{"MONDO:0013853":null},"xrefs":{"Monarch":{"xref_id":"0013853"}}}


id: MONDO:0023031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis acral with facial and genital abnormalities (obsolete MONDO:0023031)","termid":"MONDO:0023031","xrefs":{"Monarch":{"xref_id":"0023031"}}}


id: PBO:0060626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5","termid":"PBO:0060626"}


id: GO:0102386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylethanol + NADP = phenylacetaldehyde + NADPH + H+.","definition_xrefs":["GOC:pz","PMID:17644147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylacetaldehyde reductase activity","secondary_identifiers":["MetaCyc:RXN-13536"],"termid":"GO:0102386"}


id: GO:0097601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A retina homeostatic process preventing the degeneration of a retina blood vessel.","definition_xrefs":["GOC:jh2","PMID:23093773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina blood vessel maintenance","synonyms":[{"name":"maintenance of choriocapillaris","type":"narrow"},{"name":"maintenance of retina blood vessel","type":"exact"},{"name":"maintenance of retinal blood vessel","type":"exact"}],"termid":"GO:0097601"}


id: PBO:0029205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_activation_of_mitotic_cell_cycle_spindle_assembly_checkpoint","termid":"PBO:0029205"}


id: PBO:0082273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AN1-type zinc finger protein, effector of proteotoxic stress response; stress-inducible transcriptional target of Rpn4p; induced by nitrogen limitation, weak acid, misfolded proteins; short-lived protein, degraded by proteasome; may protect cells from trivalent metalloid induced proteotoxicity; contains PACE promoter element; ortholog of human AIRAP, which stimulates proteasome activity in response to arsenic; protein abundance increases under DNA replication stress","termid":"PBO:0082273"}


id: PBO:0039140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ajuba LIM protein","termid":"PBO:0039140"}


id: PBO:0080620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 59","termid":"PBO:0080620"}


id: MOD:01697
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an 4-(2-aminoethyl)benzenesulfonyl group.","definition_xrefs":["Unimod:276#N-term","DeltaMass:235","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino 4-(2-aminoethyl)benzenesulfonylated residue","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01697"}


id: PBO:0087851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transaldolase of unknown function; transcription is repressed by Mot1p and induced by alpha-factor and during diauxic shift; NQM1 has a paralog, TAL1, that arose from the whole genome duplication","termid":"PBO:0087851"}


id: MONDO:0006142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell carcinoma arising from the cervix.","definition_xrefs":["NCIT:C7982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical small cell carcinoma","secondary_identifiers":["UMLS:C0279674","ONCOTREE:SCCE","MEDGEN:79025","DOID:6740","EFO:1000171"],"synonyms":[{"name":"Cervical small cell cancer","type":"exact"},{"name":"SCCE","type":"related"},{"name":"cervical small cell carcinoma","type":"exact"},{"name":"cervix small cell carcinoma","type":"exact"},{"name":"cervix uteri small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of cervix","type":"exact"},{"name":"small cell carcinoma of cervix uteri","type":"exact"},{"name":"small cell carcinoma of the cervix","type":"exact"},{"name":"small cell carcinoma of the cervix uteri","type":"exact"},{"name":"small cell carcinoma of the uterine cervix","type":"exact"},{"name":"small cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix small cell carcinoma","type":"exact"}],"termid":"MONDO:0006142","xrefs":{"Monarch":{"xref_id":"0006142"}}}


id: GO:0050986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an isopeptide cross-link between peptidyl-glutamate and peptidyl-glycine to produce N-(L-isoglutamyl)-glycine, as found in the antibiotic microcin J25.","definition_xrefs":["PMID:14531691","RESID:AA0360"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptide cross-linking via N-(L-isoglutamyl)-glycine (obsolete GO:0050986)","termid":"GO:0050986"}


id: PBO:0052361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF9 antisense RNA 1","termid":"PBO:0052361"}


id: MONDO:0015997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectopia lentis-chorioretinal dystrophy-myopia syndrome is characterized by anomalies of the lens (ectopia and cataracts) and retina (generalized tapetoretinal dystrophy and total retinal detachment). Myopia has also been reported. It has been described in four members of the same family, all resulting from a consanguineous marriage. The mode of transmission is autosomal recessive.","definition_xrefs":["Orphanet:1884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ectopia lentis-chorioretinal dystrophy-myopia syndrome","secondary_identifiers":["MEDGEN:419715","GARD:3999","MESH:C536124","SCTID:722437006","UMLS:C2931115"],"synonyms":[{"name":"ectopia lentis chorioretinal dystrophy myopia","type":"related"},{"name":"noble Bass Sherman syndrome","type":"related"},{"name":"noble-Bass-Sherman syndrome","type":"exact"}],"termid":"MONDO:0015997","xrefs":{"Monarch":{"xref_id":"0015997"}}}


id: GO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgW isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgW immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgW immunoglobulin complex","termid":"GO:0071758"}


id: FYPO:0001091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to heat shock is normal (i.e. indistinguishable from wild type). Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular response to heat shock","synonyms":[{"name":"normal cellular response to heat shock during mitotic cell cycle","type":"related"},{"name":"normal cellular response to heat shock during vegetative growth","type":"exact"}],"termid":"FYPO:0001091"}


id: PBO:0088898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus9","termid":"PBO:0088898"}


id: MONDO:0003356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyosarcoma characterized by the presence of epithelioid round cells with eosinophilic to clear cytoplasm.","definition_xrefs":["NCIT:C3700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"epithelioid leiomyosarcoma","secondary_identifiers":["UMLS:C0205815","DOID:5264","ICDO:8891/3","MEDGEN:61454"],"synonyms":[{"name":"epithelioid leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003356","xrefs":{"Monarch":{"xref_id":"0003356"}}}


id: PBO:0084814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant show severe fragmentation of mitochondria; expression is strongly induced by alpha factor; may have role in maintenance of mitochondrial morphology","termid":"PBO:0084814"}


id: MONDO:1010799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutis laxa that occurs in sika deer.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutis laxa, non-human animal","termid":"MONDO:1010155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, sika deer","secondary_identifiers":["OMIA:002404-9863"],"termid":"MONDO:1010799","xrefs":{"Monarch":{"xref_id":"1010799"}}}


id: GO:0008322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a Pro-Xaa bond to release a C-terminal amino acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete Pro-X carboxypeptidase activity (obsolete GO:0008322)","synonyms":[{"name":"Pro-X carboxypeptidase activity","type":"exact"}],"termid":"GO:0008322"}


id: GO:0002629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of proteolysis associated with antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002584"},{"relation_name":"is_a","term_name":"regulation of proteolysis associated with antigen processing and presentation","termid":"GO:0002628"},{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis involved in protein catabolic process","termid":"GO:1903051"},{"relation_name":"negatively_regulates","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proteolysis associated with antigen processing and presentation","synonyms":[{"name":"down regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"down-regulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"downregulation of proteolysis associated with antigen processing and presentation","type":"exact"},{"name":"inhibition of proteolysis associated with antigen processing and presentation","type":"narrow"}],"termid":"GO:0002629"}


id: GO:0070915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the phospholipid derivative lysophosphatidic acid, and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf","GOC:mah","PMID:15755723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bioactive lipid receptor activity","termid":"GO:0045125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"lysophosphatidic acid receptor activity","synonyms":[{"name":"LPA receptor activity","type":"exact"}],"termid":"GO:0070915"}


id: MONDO:0030844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 47","secondary_identifiers":["MEDGEN:1721477","UMLS:C5436818","DOID:0112175","OMIM:619102"],"synonyms":[{"name":"SPGF47","type":"exact"},{"name":"spermatogenic failure 47","type":"exact"}],"termid":"MONDO:0030844","xrefs":{"Monarch":{"xref_id":"0030844"}}}


id: GO:1903805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:23895341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-valine import across plasma membrane","secondary_identifiers":["GO:0090468"],"synonyms":[{"name":"L-valine import into cell","type":"exact"},{"name":"valine import","type":"narrow"}],"termid":"GO:1903805"}


id: PBO:0086110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for biogenesis of 40S (small) ribosomal subunit; has similarity to the beta subunit of trimeric G-proteins and the splicing factor Prp4p; essential gene","termid":"PBO:0086110"}


id: MONDO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated pauciimmune pulmonary capillaritis is a small vessel vasculitis restricted to the lungs that may induce diffuse alveolar hemorrhage with dyspnea, anemia, chest pain, hemoptysis, bilateral and diffuse alveolar infiltrates at chest X-rays, without any underlying systemic disease. ANCA are frequently positive but could be negative.","definition_xrefs":["Orphanet:264691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated pulmonary capillaritis","secondary_identifiers":["SCTID:707436001","ICD9:448.9","GARD:20924","MEDGEN:842738","UMLS:C3873357","icd11.foundation:1607123556","icd11.foundation:1610022220"],"termid":"MONDO:0017018","xrefs":{"Monarch":{"xref_id":"0017018"}}}


id: PBO:0085572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein integral to the mitochondrial membrane; has a conserved methyltransferase motif and is predicted to be an RNA methyltransferase; multicopy suppressor of respiratory defects caused by OXA1 mutations","termid":"PBO:0085572"}


id: PBO:0005202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase P5 type (predicted)","termid":"PBO:0005202"}


id: PBO:0080272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 35 pseudogene","termid":"PBO:0080272"}


id: PBO:0081457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 324","termid":"PBO:0081457"}


id: MONDO:0009657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive lysosomal storage disease caused by deficiency of the enzyme acetyl-CoA:alpha-glucosaminide acetyltransferase. It is characterized by behavioral changes, sleep disturbances, and mental developmental delays.","definition_xrefs":["NCIT:C84899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis type 3","termid":"MONDO:0018937"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"mucopolysaccharidosis type 3C","secondary_identifiers":["icd11.foundation:1755913480","NANDO:1200103","NANDO:2201176","Orphanet:79271","DOID:0111393","SCTID:75238000","GARD:7073","UMLS:C0086649","MEDGEN:39477","OMIM:252930"],"synonyms":[{"name":"Acetyl-CoA alpha-glucosaminide n-acetyltransferase deficiency","type":"related"},{"name":"HGSNAT deficiency","type":"exact"},{"name":"MPS 3C","type":"related"},{"name":"MPS III C","type":"exact"},{"name":"MPS IIIC","type":"related"},{"name":"MPS3C","type":"exact"},{"name":"MPSIIIC","type":"exact"},{"name":"Mucopoly-saccharidosis type 3C","type":"related"},{"name":"Sanfilippo C","type":"exact"},{"name":"Sanfilippo syndrome C","type":"related"},{"name":"Sanfilippo syndrome type C","type":"exact"},{"name":"acetyl-CoA:alpha-glucosaminide N-acetyltransferase deficiency","type":"related"},{"name":"heparan-alpha-glucosaminide N-acetyltransferase deficiency","type":"exact"},{"name":"mucopolysaccharidosis type 3C","type":"exact"},{"name":"mucopolysaccharidosis type IIIC","type":"exact"},{"name":"mucopolysaccharidosis type IIIC (Sanfilippo C)","type":"exact"},{"name":"mucopolysaccharidosis, type 3C","type":"related"},{"name":"mucopolysaccharidosis, type IIIC","type":"related"}],"termid":"MONDO:0009657","xrefs":{"Monarch":{"xref_id":"0009657"}}}


id: PBO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18","termid":"PBO:0070944"}


id: PBO:0055586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3022","termid":"PBO:0055586"}


id: GO:0048813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendrite are generated and organized.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:bc","PMID:22683681","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite morphogenesis","termid":"GO:0048813"}


id: GO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast development","termid":"GO:0002076"}


id: PBO:0078951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-1","termid":"PBO:0078951"}


id: GO:0102033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-long-chain fatty acid + O2 + reduced [NADPH--hemoprotein reductase] = an omega-hydroxy-long-chain fatty acid + H+ + H2O + oxidized [NADPH--hemoprotein reductase]. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:18544608","RHEA:56748","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acid omega-hydroxylase activity","secondary_identifiers":["EC:1.14.14.80","MetaCyc:RXN-16394"],"synonyms":[{"name":"cytochrome P450 fatty acid omega-hydroxylase activity","type":"related"}],"termid":"GO:0102033"}


id: MOD:00036
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to (2S,3R)-3-hydroxyaspartic acid.","definition_xrefs":["PubMed:8355279","ChEBI:141848","RESID:AA0027","Unimod:35#D","PubMed:6871167","OMSSA:59","PubMed:6572939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxy-L-aspartic acid","termid":"MOD:01926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R)-3-hydroxyaspartic acid","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanedioic acid","type":"exact"},{"name":"(2S,3R)-3-hydroxyaspartic acid","type":"exact"},{"name":"(3R)3HyAsp","type":"exact"},{"name":"2-amino-3-hydroxysuccinic acid","type":"exact"},{"name":"2-azanyl-3-hydroxybutanedioic acid","type":"exact"},{"name":"3-hydroxyaspartic acid","type":"exact"},{"name":"L-erythro-beta-hydroxyaspartic acid","type":"exact"},{"name":"MOD_RES (3R)-3-hydroxyaspartate","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"erythro-beta-hydroxylated L-aspartic acid","type":"exact"},{"name":"hydroxylationd","type":"exact"}],"termid":"MOD:00036"}


id: MONDO:0004184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the urethra.","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral disorder","secondary_identifiers":["UMLS:C0041969","SCTID:4985009","MEDGEN:22569","MESH:D014522","DOID:732","NCIT:C26903","EFO:0009689"],"synonyms":[{"name":"disease of urethra","type":"exact"},{"name":"disease or disorder of urethra","type":"exact"},{"name":"disorder of urethra","type":"exact"},{"name":"urethra disease","type":"exact"},{"name":"urethra disease or disorder","type":"exact"},{"name":"urethra disorder","type":"exact"}],"termid":"MONDO:0004184","xrefs":{"Monarch":{"xref_id":"0004184"}}}


id: GO:0103056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A53 + O2 + 2-oxoglutarate = gibberellin A44 diacid + carbon dioxide + succinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A53, 2-oxoglutarate:oxygen oxidoreductase activity (obsolete GO:0103056)","termid":"GO:0103056"}


id: GO:0061729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-D-mannose from D-fructose-6-phosphate.","definition_xrefs":["PMID:16339137","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-D-mannose biosynthetic process from fructose-6-phosphate","secondary_identifiers":["MetaCyc:PWY-5659"],"synonyms":[{"name":"GDP-mannose biosynthetic process from fructose-6-phosphate","type":"related"},{"name":"GDP-mannose biosynthetic process from glucose","type":"related"}],"termid":"GO:0061729"}


id: GO:0009793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryo over time, from zygote formation to the end of seed dormancy. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"embryo development","termid":"GO:0009790"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo development ending in seed dormancy","synonyms":[{"name":"embryogenesis","type":"broad"}],"termid":"GO:0009793"}


id: PBO:0085170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oleate-activated transcription factor; subunit of a heterodimeric complex with Pip2p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; regulates chromatin silencing at telomeres; involved in diauxic shift; OAF1 has a paralog, PIP2, that arose from the whole genome duplication","termid":"PBO:0085170"}


id: GO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [L-glutamate:ammonia ligase (ADP-forming)] = diphosphate + adenylyl-[L-glutamate:ammonia ligase (ADP-forming)].","definition_xrefs":["EC:2.7.7.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"[glutamate-ammonia-ligase] adenylyltransferase activity","secondary_identifiers":["MetaCyc:GSADENYLATION-RXN","RHEA:18589"],"synonyms":[{"name":"ATP:L-glutamate:ammonia ligase (ADP-forming) adenylyltransferase activity","type":"related"},{"name":"ATP:[glutamate-ammonia-ligase] adenylyltransferase activity","type":"exact"},{"name":"ATP:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"adenosine triphosphate:glutamine synthetase adenylyltransferase activity","type":"related"},{"name":"glutamate-ammonia-ligase adenylyltransferase activity","type":"exact"},{"name":"glutamine-synthetase adenylyltransferase activity","type":"related"}],"termid":"GO:0008882"}


id: GO:0097034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex IV (also known as cytochrome c oxidase complex), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex IV biogenesis (obsolete GO:0097034)","synonyms":[{"name":"mitochondrial cytochrome c oxidase complex biogenesis","type":"exact"}],"termid":"GO:0097034"}


id: PBO:0063147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 1, processing body mRNA decay factor","termid":"PBO:0063147"}


id: PBO:0003994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit Cdm1","termid":"PBO:0003994"}


id: MONDO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with hyperdiploidy","secondary_identifiers":["NCIT:C80335","GARD:22345","UMLS:C2698311","DOID:0080646","MEDGEN:397154","Orphanet:585936"],"termid":"MONDO:0035943","xrefs":{"Monarch":{"xref_id":"0035943"}}}


id: PBO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT homolog, translational regulator (predicted)","termid":"PBO:0002319"}


id: FYPO:0004408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing triplatin tetranitrate (also called BBR 3464).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002060","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on triplatin tetranitrate","synonyms":[{"name":"normal cell population growth in presence of triplatin tetranitrate","type":"exact"},{"name":"normal cell population growth on BBR 3464","type":"exact"},{"name":"normal cell population growth on triplatin tetranitrate","type":"exact"},{"name":"normal cellular response to triplatin tetranitrate","type":"related"},{"name":"normal vegetative cell population growth on triplatin tetranitrate","type":"exact"}],"termid":"FYPO:0004408"}


id: MONDO:0015061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurogenic thoracic outlet syndrome (NTOS) is a form of thoracic outlet syndrome (TOS) that presents with pain, paresthesias and weakness in an upper extremity and is divided into true NTOS and disputed NTOS.","definition_xrefs":["Orphanet:100073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic outlet syndrome","termid":"MONDO:0005979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenic thoracic outlet syndrome","secondary_identifiers":["MEDGEN:155880","GARD:19749","UMLS:C0751549","SCTID:2040007"],"synonyms":[{"name":"NTOS","type":"exact"},{"name":"neurogenic TOS","type":"exact"},{"name":"neurogenic cervical rib syndrome","type":"exact"},{"name":"neurogenic costoclavicular syndrome","type":"exact"},{"name":"neurogenic thoracic outlet compression syndrome","type":"exact"}],"termid":"MONDO:0015061","xrefs":{"Monarch":{"xref_id":"0015061"}}}


id: PBO:0028988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_small_RNA_level_(obsolete_FYPO:0003262)","termid":"PBO:0028988"}


id: GO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation","termid":"GO:0002577"}


id: GO:1902010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:TermGenie","PMID:10882126","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation in response to endoplasmic reticulum stress","synonyms":[{"name":"down regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"down regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"down regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"down-regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"downregulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of protein biosynthetic process involved in ER stress response","type":"narrow"},{"name":"inhibition of protein biosynthetic process involved in response to ER stress","type":"narrow"},{"name":"inhibition of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of protein anabolism involved in ER stress response","type":"exact"},{"name":"negative regulation of protein anabolism involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein anabolism involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in ER stress response","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein biosynthesis involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in ER stress response","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein biosynthetic process involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein formation involved in ER stress response","type":"exact"},{"name":"negative regulation of protein formation involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein formation involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of protein synthesis involved in ER stress response","type":"exact"},{"name":"negative regulation of protein synthesis involved in response to ER stress","type":"exact"},{"name":"negative regulation of protein synthesis involved in response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of translation involved in ER stress response","type":"exact"},{"name":"negative regulation of translation involved in response to ER stress","type":"exact"},{"name":"protein biosynthesis inhibitor activity involved in ER stress response","type":"related"},{"name":"protein biosynthesis inhibitor activity involved in response to ER stress","type":"related"},{"name":"protein biosynthesis inhibitor activity involved in response to endoplasmic reticulum stress","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in ER stress response","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in response to ER stress","type":"related"},{"name":"protein biosynthetic process inhibitor activity involved in response to endoplasmic reticulum stress","type":"related"}],"termid":"GO:1902010"}


id: PATO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000368 towards1 (obsolete PATO:0000368)","termid":"PATO:0000368"}


id: FYPO:0002193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, contains one or more septa, is shaped in the form of a spheroid, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"has_part","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"has_part","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"normal volume vegetative cell","termid":"FYPO:0000926"},{"relation_name":"is_a","term_name":"inviable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001511"},{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000004","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"inviable normal volume septated spheroid vegetative cell","synonyms":[{"name":"inviable normal volume septated rounded vegetative cell","type":"related"},{"name":"inviable normal volume septated spheroid cell during vegetative growth","type":"exact"},{"name":"inviable normal volume septated spheroid vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; normal volume septated spheroid vegetative cell","type":"exact"}],"termid":"FYPO:0002193"}


id: GO:0043643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetracycline, (4S,4aS,5aS,6S,12aS)-4-(dimethylamino)-3,6,10,12,12a-pentahydroxy-6-methyl-1,11-dioxo-1,4,4a,5,5a,6,11,12a-octahydrotetracene-2-carboxamide, a broad-spectrum antibiotic produced by streptomyces bacteria that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["GOC:jl","Wikipedia:Tetracycline"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"polyketide metabolic process","termid":"GO:0030638"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"tetracycline metabolic process","synonyms":[{"name":"tetracyclin metabolic process","type":"exact"},{"name":"tetracyclin metabolism","type":"exact"},{"name":"tetracycline metabolism","type":"exact"}],"termid":"GO:0043643"}


id: PBO:0078876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPS1 antisense RNA 1","termid":"PBO:0078876"}


id: PBO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Cia1","termid":"PBO:0090109"}


id: MONDO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schistosoma mansoni infection, susceptibility (obsolete MONDO:0000093)","termid":"MONDO:0000093","xrefs":{"Monarch":{"xref_id":"0000093"}}}


id: PBO:0017983
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Partner of DeCapping enzyme protein","termid":"PBO:0017983"}


id: PBO:0056910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mast cell immunoglobulin like receptor 1","termid":"PBO:0056910"}


id: PBO:0085415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter for both urea and polyamines; expression is highly sensitive to nitrogen catabolite repression and induced by allophanate, the last intermediate of the allantoin degradative pathway","termid":"PBO:0085415"}


id: PBO:0069534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 804, pseudogene","termid":"PBO:0069534"}


id: PBO:0039366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion molecule with Ig like domain 2","termid":"PBO:0039366"}


id: PBO:0046682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation termination factor 1","termid":"PBO:0046682"}


id: PBO:0090948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh6","termid":"PBO:0090948"}


id: PBO:0027226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-monoseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027226"}


id: PR:Q9P6N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01088","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pep5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.12","secondary_identifiers":["UniProtKB:Q9P6N4"],"synonyms":[{"name":"Spom972h-VPS11","type":"exact"},{"name":"carboxypeptidase Y-deficient protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"histone E3 ligase pep5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar protein sorting-associated protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N4"}


id: PBO:0075022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-33","termid":"PBO:0075022"}


id: PBO:0079263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 34","termid":"PBO:0079263"}


id: PBO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trna Adenosine Deaminase","termid":"PBO:0001072"}


id: GO:0010439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of glucosinolate biosynthetic process","termid":"GO:0010439"}


id: GO:1904833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of removal of superoxide radicals.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:TermGenie","PMID:22836756","GOC:BHF_miRNA","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of removal of superoxide radicals","termid":"GO:2000121"},{"relation_name":"is_a","term_name":"positive regulation of reactive oxygen species metabolic process","termid":"GO:2000379"},{"relation_name":"positively_regulates","term_name":"removal of superoxide radicals","termid":"GO:0019430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0098754"},{"rel_name":"regulates","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"positive regulation of removal of superoxide radicals","synonyms":[{"name":"activation of cellular detoxification of superoxide radicals","type":"narrow"},{"name":"activation of removal of O2-","type":"narrow"},{"name":"activation of removal of oxygen free radicals","type":"narrow"},{"name":"activation of removal of superoxide radicals","type":"narrow"},{"name":"positive regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"positive regulation of removal of O2-","type":"exact"},{"name":"positive regulation of removal of oxygen free radicals","type":"exact"},{"name":"up regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"up regulation of removal of O2-","type":"exact"},{"name":"up regulation of removal of oxygen free radicals","type":"exact"},{"name":"up regulation of removal of superoxide radicals","type":"exact"},{"name":"up-regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"up-regulation of removal of O2-","type":"exact"},{"name":"up-regulation of removal of oxygen free radicals","type":"exact"},{"name":"up-regulation of removal of superoxide radicals","type":"exact"},{"name":"upregulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"upregulation of removal of O2-","type":"exact"},{"name":"upregulation of removal of oxygen free radicals","type":"exact"},{"name":"upregulation of removal of superoxide radicals","type":"exact"}],"termid":"GO:1904833"}


id: FYPO:0007061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin monomers associate to form a new branch on the side of an existing actin filament, mediated by the Arp2/3 protein complex, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"normal Arp2/3 complex-mediated actin filament nucleation","type":"exact"},{"name":"normal Arp2/3 complex-mediated actin nucleation during mitotic cell cycle","type":"related"},{"name":"normal Arp2/3 complex-mediated actin nucleation during vegetative growth","type":"exact"},{"name":"normal actin filament branch nucleation","type":"exact"},{"name":"normal branched actin filament nucleation","type":"exact"}],"termid":"FYPO:0007061"}


id: RO:0008506
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship describing organisms that often occur together at the same time and space or in the same environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-occurs","termid":"RO:0008506"}


id: MONDO:1010041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meckel diverticulum that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel diverticulum, non-human animal","secondary_identifiers":["OMIA:001217"],"termid":"MONDO:1010041","xrefs":{"Monarch":{"xref_id":"1010041"}}}


id: GO:0005838
data:
  {"annotated_genes":["SJAG_04144","SJAG_01652","SJAG_01489","SJAG_03408","SJAG_04484","SJAG_04211","SJAG_00712","SJAG_04477","SJAG_01544","SJAG_00762","SJAG_04088","SJAG_00766","SJAG_02900","SJAG_03733","SJAG_01203","SJAG_03638","SJAG_01131","SJAG_00738","SJAG_03321","SJAG_02992","SJAG_04572"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80203,78484,79926,79480,73457,77414,78301,73991,78759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[73167,71637,73922,74591,78523,71742,76810,79696,99273,111538,115457,62622,74604],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes and unfolds ubiquitinated proteins, and translocates them to the proteasome core complex.","definition_xrefs":["GOC:rb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_03733":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proteasome regulatory particle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"19S regulatory particle","type":"narrow"},{"name":"PA700 proteasome activator","type":"narrow"},{"name":"PA700-dependent proteasome activator","type":"exact"},{"name":"modulator complex","type":"related"}],"termid":"GO:0005838","terms_by_termid":{"GO:0008540":null,"GO:0008541":null}}


id: PBO:0081150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP90 zinc finger protein","termid":"PBO:0081150"}


id: PBO:0060145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription rescue factor 1","termid":"PBO:0060145"}


id: PBO:0088171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Xanthine-guanine phosphoribosyl transferase; required for xanthine utilization and for optimal utilization of guanine","termid":"PBO:0088171"}


id: PBO:0072423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 28","termid":"PBO:0072423"}


id: GO:0061837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a neuropeptide precursor. Processing leads to the attainment of the full functional capacity of the neuropeptide.","definition_xrefs":["PMID:17564681","PMID:12657671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor ligand precursor processing","termid":"GO:0140448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"neuropeptide processing","termid":"GO:0061837"}


id: MONDO:1010046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent urachus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent urachus, non-human animal","secondary_identifiers":["OMIA:000781"],"termid":"MONDO:1010046","xrefs":{"Monarch":{"xref_id":"1010046"}}}


id: PBO:0074204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 13","termid":"PBO:0074204"}


id: MONDO:0009713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 18, autosomal recessive","secondary_identifiers":["OMIM:255500","MESH:C567606","UMLS:C2749509","MEDGEN:411856"],"synonyms":[{"name":"MYP18","type":"exact"},{"name":"myopia 18, autosomal recessive","type":"exact"}],"termid":"MONDO:0009713","xrefs":{"Monarch":{"xref_id":"0009713"}}}


id: GO:0007171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of the inactive transmembrane receptor protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of protein kinase activity","termid":"GO:0032147"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0023052","GO:0065003"],"is_obsolete":false,"name":"activation of transmembrane receptor protein tyrosine kinase activity","synonyms":[{"name":"transmembrane receptor protein tyrosine kinase activation","type":"related"},{"name":"transmembrane receptor protein tyrosine kinase dimerization","type":"related"}],"termid":"GO:0007171"}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: GO:1904192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:24498161","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"cholangiocyte apoptotic process","termid":"GO:1902488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte apoptotic process","synonyms":[{"name":"regulation of cholangiocyte apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptosis","type":"narrow"},{"name":"regulation of epithelial cell of bile duct apoptotic process","type":"exact"}],"termid":"GO:1904192"}


id: PBO:0078112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-2","termid":"PBO:0078112"}


id: MONDO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"tympanitis","termid":"MONDO:0024616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute tympanitis","secondary_identifiers":["UMLS:C0155460","ICD9:384.00","DOID:13790","MEDGEN:509976","SCTID:297009"],"synonyms":[{"name":"acute myringitis","type":"exact"}],"termid":"MONDO:0001802","xrefs":{"Monarch":{"xref_id":"0001802"}}}


id: PBO:0029473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_tapered_vegetative_cell","termid":"PBO:0029473"}


id: GO:0030042
data:
  {"annotated_genes":["SJAG_01894","SJAG_01993","SJAG_00279","SJAG_02700","SJAG_03025","SJAG_03380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70324,73774],"is_not":false,"summary":null,"term":"GO:0030042"},{"annotations":[80555,92665,79524,76057],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Disassembly of actin filaments by the removal of actin monomers from a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin polymerization or depolymerization","termid":"GO:0008154"},{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"actin filament depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin depolymerization","type":"exact"},{"name":"actin depolymerizing activity","type":"related"}],"termid":"GO:0030042","terms_by_termid":{"GO:0030042":null,"GO:0051016":null}}


id: MONDO:0011399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited hemoglobinopathy characterized by impaired synthesis of alpha-globin chains leading to a variable clinical picture depending on the number of affected alleles.","definition_xrefs":["Orphanet:846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thalassemia","termid":"MONDO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"alpha thalassemia spectrum","secondary_identifiers":["SCTID:68913001","GARD:621","NANDO:2201273","NCIT:C34368","MESH:D017085","icd11.foundation:531667506","UMLS:C0002312","ICD9:282.49","DOID:1099","ICD9:282.43","MedDRA:10043390","ICD10CM:D56.0","OMIM:604131","MEDGEN:1434"],"synonyms":[{"name":"A-thalassemia","type":"related"},{"name":"alpha thalassaemia","type":"exact"},{"name":"alpha thalassemia spectrum","type":"exact"},{"name":"alpha-thalassemia","type":"exact"},{"name":"alpha-thalassemia trait","type":"related"},{"name":"thalassemia, alpha-","type":"exact"},{"name":"thalassemias, alpha-","type":"exact"}],"termid":"MONDO:0011399","xrefs":{"Monarch":{"xref_id":"0011399"}}}


id: FYPO:0004318
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119760,119840],"is_not":false,"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic cell cycle spindle assembly checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic spindle assembly checkpoint delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GO:0007094","PomBase:mah","PMID:11432827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly checkpoint","termid":"FYPO:0000168"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic spindle assembly checkpoint","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abolished mitotic cell cycle spindle assembly checkpoint","type":"exact"},{"name":"mitotic spindle assembly checkpoint abolished","type":"exact"}],"termid":"FYPO:0004318","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: MONDO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving the use of nonliving objects (the \\\"fetish\\\").","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetishistic disorder","secondary_identifiers":["SCTID:59174009","ICD9:302.81","MESH:D005329","NCIT:C94353","UMLS:C0015957","ICD10CM:F65.0","DOID:1235","MEDGEN:8827"],"synonyms":[{"name":"fetishism","type":"exact"}],"termid":"MONDO:0001504","xrefs":{"Monarch":{"xref_id":"0001504"}}}


id: PBO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 24","termid":"PBO:0071886"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: PBO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Val (TAC) 1-1","termid":"PBO:0061189"}


id: GO:0051389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase (MAPKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKK activity (obsolete GO:0051389)","synonyms":[{"name":"inactivation of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAPKK activity","type":"exact"}],"termid":"GO:0051389"}


id: MONDO:0016739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor of the central nervous system composed of primitive-appearing epithelial cells - putatively representing yolk sac endoderm - set in a loose, variably cellular, and often conspicuously myxoid matrix, resembling extra-embryonic mesoblast. Eosinophilic hyaline globules immunoreactive for AFP are a diagnostic feature. (WHO)","definition_xrefs":["NCIT:C7011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yolk sac tumor","termid":"MONDO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"yolk sac tumor of central nervous system","secondary_identifiers":["UMLS:C1337040","GARD:20733","MEDGEN:234492","Orphanet:252006"],"synonyms":[{"name":"CNS yolk Sac tumor","type":"exact"},{"name":"CNS yolk Sac tumour","type":"exact"},{"name":"central nervous system yolk Sac tumor","type":"exact"},{"name":"central nervous system yolk Sac tumour","type":"exact"},{"name":"endodermal sinus tumor of CNS","type":"exact"},{"name":"endodermal sinus tumor of central nervous system","type":"exact"},{"name":"endodermal sinus tumour of CNS","type":"exact"},{"name":"endodermal sinus tumour of central nervous system","type":"exact"},{"name":"intracranial endodermal sinus tumor","type":"exact"},{"name":"intracranial endodermal sinus tumour","type":"exact"},{"name":"intracranial yolk sac tumor","type":"exact"},{"name":"intracranial yolk sac tumour","type":"exact"},{"name":"yolk Sac tumor of CNS","type":"exact"},{"name":"yolk Sac tumor of central nervous system","type":"exact"},{"name":"yolk Sac tumor of the CNS","type":"exact"},{"name":"yolk Sac tumor of the central nervous system","type":"exact"},{"name":"yolk Sac tumour of CNS","type":"exact"},{"name":"yolk Sac tumour of central nervous system","type":"exact"},{"name":"yolk Sac tumour of the CNS","type":"exact"},{"name":"yolk Sac tumour of the central nervous system","type":"exact"},{"name":"yolk sac tumor of CNS","type":"exact"},{"name":"yolk sac tumour of CNS","type":"exact"}],"termid":"MONDO:0016739","xrefs":{"Monarch":{"xref_id":"0016739"}}}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["RESID:AA0350","Unimod:442#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: PBO:0087761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1; TORC1 is a rapamycin-sensitive complex involved in growth control that contains Tor1p or Tor2p, Lst8p and Tco89p; contains four HEAT repeats and seven WD-40 repeats; may act as a scaffold protein to couple TOR and its effectors","termid":"PBO:0087761"}


id: GO:0008462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are cleaved, for example, succinyl-Leu-Tyr-NHMec which is cleaved at the Tyr-NHMec bond, and Leu-Tyr-Leu-Tyr-Trp which is cleaved at the second Leu-Typ bond (cleavage of the Tyr-Leu and Tyr-Trp bonds also occurs).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase Clp activity (obsolete GO:0008462)","synonyms":[{"name":"ATP-dependent Clp protease","type":"narrow"},{"name":"Clp protease","type":"narrow"},{"name":"ClpP","type":"related"},{"name":"caseinolytic protease activity","type":"related"},{"name":"endopeptidase Clp activity","type":"exact"},{"name":"endopeptidase Ti activity","type":"related"},{"name":"protease Ti activity","type":"related"}],"termid":"GO:0008462"}


id: GO:1900874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving heptadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heptadec-1-ene metabolic process","synonyms":[{"name":"heptadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900874"}


id: MONDO:0014026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the LRIT3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"LRIT3-related retinopathy","termid":"MONDO:1040035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness 1F","secondary_identifiers":["OMIM:615058","UMLS:C3554399","GARD:15899","DOID:0110864","MEDGEN:767313"],"synonyms":[{"name":"CSNB1F","type":"exact"},{"name":"LRIT3 congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness 1F autosomal recessive","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in LRIT3","type":"exact"},{"name":"congenital stationary night blindness type 1F","type":"exact"},{"name":"night blindness, congenital stationary (complete), 1F, autosomal recessive","type":"exact"},{"name":"night blindness, congenital stationary, type 1F","type":"related"}],"termid":"MONDO:0014026","xrefs":{"Monarch":{"xref_id":"0014026"}}}


id: PBO:0074554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 7","termid":"PBO:0074554"}


id: GO:0010301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + xanthoxin = (+)-abscisic aldehyde + H+ + NADH.","definition_xrefs":["EC:1.1.1.288","RHEA:12548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"xanthoxin dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R06954","MetaCyc:1.1.1.288-RXN","GO:0033710"],"synonyms":[{"name":"ABA2","type":"related"},{"name":"xanthoxin dehydrogenase activity","type":"broad"},{"name":"xanthoxin oxidase activity","type":"related"},{"name":"xanthoxin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0010301"}


id: PBO:0080890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH N6-methyladenosine RNA binding protein F1","termid":"PBO:0080890"}


id: GO:0016199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition of molecules at the central nervous system midline choice point by an axon growth cone; this choice point determines whether the growth cone will cross the midline.","definition_xrefs":["PMID:11376484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon choice point recognition","termid":"GO:0016198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axon midline choice point recognition","termid":"GO:0016199"}


id: PBO:0087243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protein phosphatase involved in formation of FAR complex; inhibits mitophagy by dephosphorylating Atg32p; required for glycogen accumulation; interacts with Tap42p, which binds to and regulates other protein phosphatases","termid":"PBO:0087243"}


id: PBO:0063392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 6 interacting protein","termid":"PBO:0063392"}


id: GO:0018328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-histidine to form 3'-phospho-L-histidine (otherwise known as pi-phosphohistidine, pros-phosphohistidine).","definition_xrefs":["RESID:AA0036"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 3'-phospho-L-histidine (obsolete GO:0018328)","termid":"GO:0018328"}


id: GO:0006640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoacylglycerol metabolic process","termid":"GO:0046462"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monoacylglycerol biosynthetic process","synonyms":[{"name":"monoacylglycerol anabolism","type":"exact"},{"name":"monoacylglycerol biosynthesis","type":"exact"},{"name":"monoacylglycerol formation","type":"exact"},{"name":"monoacylglycerol synthesis","type":"exact"},{"name":"monoglyceride biosynthesis","type":"exact"},{"name":"monoglyceride biosynthetic process","type":"exact"}],"termid":"GO:0006640"}


id: PBO:0056287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase endo-alpha like","termid":"PBO:0056287"}


id: PATO:0001168
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of not being harmed or injured or spoiled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damage","termid":"PATO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undamaged","termid":"PATO:0001168"}


id: PBO:0065262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23 domain containing 3, pseudogene","termid":"PBO:0065262"}


id: GO:0071070
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to thrombospondin-2.","definition_xrefs":["PMID:11980922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alpha4-beta1 integrin-thrombospondin-2 complex","synonyms":[{"name":"ITGA4-ITGB1-THBS2 complex","type":"narrow"}],"termid":"GO:0071070"}


id: MONDO:0022805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic malakoplakia","secondary_identifiers":["MEDGEN:540762","UMLS:C0267536"],"termid":"MONDO:0022805","xrefs":{"Monarch":{"xref_id":"0022805"}}}


id: GO:1900598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of demethylkotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"demethylkotanin metabolic process","termid":"GO:1900597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"demethylkotanin catabolic process","synonyms":[{"name":"demethylkotanin breakdown","type":"exact"},{"name":"demethylkotanin catabolism","type":"exact"},{"name":"demethylkotanin degradation","type":"exact"}],"termid":"GO:1900598"}


id: GO:0050258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + H+ + riboflavin = D-ribitol + lumichrome.","definition_xrefs":["EC:3.5.99.1","RHEA:11408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"riboflavinase activity","secondary_identifiers":["KEGG_REACTION:R01732","MetaCyc:RIBOFLAVINASE-RXN"],"synonyms":[{"name":"riboflavin hydrolase activity","type":"related"}],"termid":"GO:0050258"}


id: PBO:0087433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087433"}


id: GO:0071418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amine stimulus. An amine is a compound formally derived from ammonia by replacing one, two or three hydrogen atoms by hydrocarbyl groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amine stimulus","termid":"GO:0071418"}


id: GO:0015742
data:
  {"annotated_genes":["SJAG_00275","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71884],"is_not":false,"summary":null,"term":"GO:0015742"},{"annotations":[96893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The directed movement of alpha-ketoglutarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"alpha-ketoglutarate transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate transport","type":"exact"},{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015742","terms_by_termid":{"GO:0015742":null,"GO:1990550":null}}


id: PBO:0078481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 5-1","termid":"PBO:0078481"}


id: PBO:0012221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 3 (predicted)","termid":"PBO:0012221"}


id: PBO:0055327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2755","termid":"PBO:0055327"}


id: GO:0019922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linking of a chromophore to a protein via peptidyl-cysteines.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-cysteine (obsolete GO:0019922)","termid":"GO:0019922"}


id: PBO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug147","termid":"PBO:0018085"}


id: SO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one D-gene, one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_D_DJ_cluster","synonyms":[{"name":"V D DJ cluster","type":"exact"},{"name":"V-D-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000528"}


id: PBO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Ies2","termid":"PBO:0001540"}


id: PR:Q9Y7S1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein C569.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.02c","synonyms":[{"name":"Spom972h-SPCC569.02c","type":"exact"}],"termid":"PR:Q9Y7S1"}


id: MONDO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleomorphic xanthoastrocytoma (obsolete MONDO:0003167)","termid":"MONDO:0003167","xrefs":{"Monarch":{"xref_id":"0003167"}}}


id: PBO:0080367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vanin 1","termid":"PBO:0080367"}


id: PBO:0051096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 6","termid":"PBO:0051096"}


id: PBO:0085212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC motif binding protein involved in rRNA and ribosome biogenesis; subunit of the RPD3L histone deacetylase complex; Myb-like HTH transcription factor; hypophosphorylated by rapamycin treatment in a Sch9p-dependent manner; activated in stochastic pulses of nuclear localization","termid":"PBO:0085212"}


id: GO:0035716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 12.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 12 binding","synonyms":[{"name":"CCL12 binding","type":"exact"}],"termid":"GO:0035716"}


id: FYPO:0002760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"short cytoplasmic microtubules","synonyms":[{"name":"short cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"short cytoplasmic microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0002760"}


id: PATO:0001381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing three homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Triploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triploid","termid":"PATO:0001381"}


id: MONDO:0024500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that involves the duodenum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neuroendocrine neoplasm","termid":"MONDO:0018510"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenal neuroendocrine neoplasm","secondary_identifiers":["UMLS:C5568608","MEDGEN:1800031"],"synonyms":[{"name":"duodenum NET","type":"exact"},{"name":"duodenum neuroendocrine neoplasm","type":"exact"},{"name":"duodenum neuroendocrine tumor","type":"exact"},{"name":"duodenum neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"duodenum neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of duodenum","type":"exact"}],"termid":"MONDO:0024500","xrefs":{"Monarch":{"xref_id":"0024500"}}}


id: PBO:0085508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S11 and bacterial S17; N-terminally propionylated in vivo; RPS11A has a paralog, RPS11B, that arose from the whole genome duplication","termid":"PBO:0085508"}


id: PBO:0055459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2891","termid":"PBO:0055459"}


id: PBO:0116289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatin remodeling complex; target of the Mec1p/Tel1p DNA damage signaling pathway; proposed to link chromatin remodeling to replication checkpoint responses","termid":"PBO:0116289"}


id: MONDO:0010735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kennedy's disease, also known as bulbospinal muscular atrophy (BSMA), is a rare X-linked recessive motor neuron disease characterized by proximal and bulbar muscle wasting.","definition_xrefs":["Orphanet:481"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"excluded_subClassOf","term_name":"male infertility","termid":"MONDO:0005372"},{"relation_name":"excluded_subClassOf","term_name":"obsolete bulbospinal muscular atrophy of adulthood (obsolete MONDO:0016115)","termid":"MONDO:0016115"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Kennedy disease","secondary_identifiers":["OMIM:313200","NCIT:C85233","MEDGEN:333282","MESH:D055534","GARD:6818","MedDRA:10068600","UMLS:C1839259","DOID:0060161","NANDO:1200001"],"synonyms":[{"name":"Kennedy disease","type":"exact"},{"name":"Kennedy spinal and bulbar muscular atrophy","type":"related"},{"name":"Kennedy's disease","type":"exact"},{"name":"SBMA","type":"exact"},{"name":"SMAX1","type":"exact"},{"name":"X-linked BSMA","type":"exact"},{"name":"X-linked bulbo-spinal atrophy","type":"exact"},{"name":"X-linked bulbospinal amyotrophy","type":"exact"},{"name":"X-linked bulbospinal muscular atrophy","type":"exact"},{"name":"X-linked spinal and bulbar muscular atrophy","type":"exact"},{"name":"bulbospinal muscular atrophy, X-linked","type":"related"},{"name":"bulbospinal neuronopathy, X-linked recessive","type":"related"},{"name":"spinal and bulbar muscular atrophy","type":"related"},{"name":"spinal and bulbar muscular atrophy of Kennedy, X-linked recessive","type":"exact"},{"name":"spinal and bulbar muscular atrophy, X-linked 1","type":"related"},{"name":"spinal and bulbar muscular atrophy, X-linked type 1","type":"exact"},{"name":"spinal bulbar muscular atrophy","type":"exact"},{"name":"spinobulbar muscular atrophy","type":"exact"}],"termid":"MONDO:0010735","xrefs":{"Monarch":{"xref_id":"0010735"}}}


id: GO:1903408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium:potassium-exchanging ATPase activity.","definition_xrefs":["GO_REF:0000059","GOC:mr","GOC:TermGenie","PMID:8160880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"regulation of P-type sodium:potassium-exchanging transporter activity","termid":"GO:1903406"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of P-type sodium:potassium-exchanging transporter activity","synonyms":[{"name":"activation of (Na+ + K+)-ATPase activity","type":"narrow"},{"name":"activation of (Na+ + K+)-activated ATPase activity","type":"narrow"},{"name":"activation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"narrow"},{"name":"activation of Na(+)/K(+)-ATPase activity","type":"narrow"},{"name":"activation of Na(+)/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"activation of Na+,K+ pump","type":"related"},{"name":"activation of Na+,K+-ATPase activity","type":"narrow"},{"name":"activation of Na+/K+-ATPase activity","type":"narrow"},{"name":"activation of Na+/K+-exchanging ATPase activity","type":"narrow"},{"name":"activation of Na,K-activated ATPase activity","type":"narrow"},{"name":"activation of Na,K-pump","type":"related"},{"name":"activation of sodium/potassium-exchanging ATPase activity","type":"narrow"},{"name":"activation of sodium/potassium-transporting ATPase activity","type":"narrow"},{"name":"activation of sodium:potassium exchanging ATPase activity","type":"narrow"},{"name":"activation of sodium:potassium-exchanging ATPase activity","type":"narrow"},{"name":"positive regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"positive regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"positive regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"positive regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"positive regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of Na+,K+ pump","type":"related"},{"name":"positive regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"positive regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"positive regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"positive regulation of Na,K-pump","type":"related"},{"name":"positive regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"positive regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"positive regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"up regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"up regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"up regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"up regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up regulation of Na+,K+ pump","type":"related"},{"name":"up regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"up regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"up regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"up regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"up regulation of Na,K-pump","type":"related"},{"name":"up regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"up regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"up regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"up-regulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"up-regulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"up-regulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"up-regulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of Na+,K+ pump","type":"related"},{"name":"up-regulation of Na+,K+-ATPase activity","type":"exact"},{"name":"up-regulation of Na+/K+-ATPase activity","type":"exact"},{"name":"up-regulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of Na,K-activated ATPase activity","type":"exact"},{"name":"up-regulation of Na,K-pump","type":"related"},{"name":"up-regulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"up-regulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"up-regulation of sodium:potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of (Na+ + K+)-ATPase activity","type":"exact"},{"name":"upregulation of (Na+ + K+)-activated ATPase activity","type":"exact"},{"name":"upregulation of ATP phosphohydrolase (Na+/K+-exchanging)","type":"exact"},{"name":"upregulation of Na(+)/K(+)-ATPase activity","type":"exact"},{"name":"upregulation of Na(+)/K(+)-exchanging ATPase activity","type":"exact"},{"name":"upregulation of Na+,K+ pump","type":"related"},{"name":"upregulation of Na+,K+-ATPase activity","type":"exact"},{"name":"upregulation of Na+/K+-ATPase activity","type":"exact"},{"name":"upregulation of Na+/K+-exchanging ATPase activity","type":"exact"},{"name":"upregulation of Na,K-activated ATPase activity","type":"exact"},{"name":"upregulation of Na,K-pump","type":"related"},{"name":"upregulation of sodium/potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of sodium/potassium-transporting ATPase activity","type":"exact"},{"name":"upregulation of sodium:potassium exchanging ATPase activity","type":"exact"},{"name":"upregulation of sodium:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1903408"}


id: PBO:0001767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spo12 family protein","termid":"PBO:0001767"}


id: GO:0070847
data:
  {"annotated_genes":["SJAG_04705","SJAG_03622","SJAG_03573","SJAG_02849","SJAG_04647","SJAG_00904","SJAG_00297","SJAG_02494"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70172,74561,74927,76305,77790,77982,78625,102271],"is_not":false,"summary":null,"term":"GO:0070847"}]},"cv_name":"cellular_component","definition":"A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The core mediator complex has a stimulatory effect on basal transcription, and contains most of the same subdomains as the larger form of mediator complex -- a head domain comprising proteins known in Saccharomyces as Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; and a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p -- but lacks the regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan core mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:17870225","PMID:16168358","PMID:11454195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00297":null,"SJAG_00904":null,"SJAG_02494":null,"SJAG_02849":null,"SJAG_03573":null,"SJAG_03622":null,"SJAG_04647":null,"SJAG_04705":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"core mediator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"C mediator complex","type":"exact"},{"name":"S mediator complex","type":"exact"}],"termid":"GO:0070847","terms_by_termid":{"GO:0070847":null}}


id: PBO:0057555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR670 host gene","termid":"PBO:0057555"}


id: MONDO:0100419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly KIT exon 8 mutation. (A molecular genetic abnormality indicating the presence of a mutation in exon 8 of the KIT gene located within 4q11-q12.)","definition_xrefs":["NCIT:C128660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, KIT exon 8 mutation","synonyms":[{"name":"AML, CD117 Exon 8 Mutation","type":"exact"},{"name":"AML, KIT Proto-Oncogene Tyrosine Protein Kinase Gene Exon 8 Mutation","type":"exact"},{"name":"AML, KIT exon 8 mutation","type":"exact"},{"name":"AML, c-KIT Exon 8 Mutation","type":"exact"},{"name":"AML, v-Kit Hardy-Zuckerman 4 Feline Sarcoma Viral Oncogene Homolog Gene Exon 8 Mutation","type":"exact"}],"termid":"MONDO:0100419","xrefs":{"Monarch":{"xref_id":"0100419"}}}


id: GO:0016116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotenoid metabolic process","synonyms":[{"name":"carotenoid metabolism","type":"exact"}],"termid":"GO:0016116"}


id: PBO:0080280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 43 pseudogene","termid":"PBO:0080280"}


id: GO:0045765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angiogenesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angiogenesis","termid":"GO:0001525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angiogenesis","termid":"GO:0045765"}


id: PBO:0051148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-30","termid":"PBO:0051148"}


id: MOD:01857
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-methionine residue by a thioether bond to form 2-(L-cystein-S-yl)-methionine.","definition_xrefs":["PubMed:20805502","RESID:AA0559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-methionine","synonyms":[{"name":"(2R)-2-amino-2-([2-amino-2-carboxyethyl]sulfanyl)-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-methionine","type":"exact"},{"name":"CROSSLNK 2-(S-cysteinyl)-methionine (Cys-Met)","type":"exact"}],"termid":"MOD:01857"}


id: PBO:0091069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mug129-like protein Mug129b","termid":"PBO:0091069"}


id: PBO:0086329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with ubiquitin-like N terminus; subunit of Nuclear Excision Repair Factor 2 (NEF2) with Rad4p that binds damaged DNA; enhances protein deglycosylation activity of Png1p; also involved, with Rad4p, in ubiquitylated protein turnover; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage","termid":"PBO:0086329"}


id: GO:0042332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to gravity.","definition_xrefs":["GOC:jid","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gravity","termid":"GO:0009629"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gravitaxis","secondary_identifiers":["GO:0048062"],"synonyms":[{"name":"geotactic behavior","type":"exact"},{"name":"geotactic behaviour","type":"exact"},{"name":"geotaxis","type":"exact"},{"name":"gravitactic behavior","type":"exact"},{"name":"gravitactic behaviour","type":"exact"},{"name":"taxis in response to gravitational stimulus","type":"exact"},{"name":"taxis in response to gravity","type":"exact"}],"termid":"GO:0042332"}


id: PBO:0029764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_double-strand_break_site","termid":"PBO:0029764"}


id: PBO:0046634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 15","termid":"PBO:0046634"}


id: PBO:0017657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylglycerol lipase (predicted)","termid":"PBO:0017657"}


id: PBO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11 (predicted)","termid":"PBO:0001822"}


id: PBO:0089704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER fusion GTPase, atlastin Sey1","termid":"PBO:0089704"}


id: GO:0015950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways by which a purine nucleotide is synthesized from another purine nucleotide.","definition_xrefs":["ISBN:0471394831","ISBN:0306444747","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule interconversion","termid":"GO:0015949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleotide interconversion","termid":"GO:0015950"}


id: PBO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complementation functionally complemented by S. cerevisiae VAM7","termid":"PBO:0018122"}


id: PATO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to a reduced rate.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neotenous growth","synonyms":[{"name":"neotenic growth","type":"exact"}],"termid":"PATO:0001491"}


id: PR:Q10294
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pac2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-independent regulatory protein pac2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.11","synonyms":[{"name":"Spom972h-pac2","type":"exact"}],"termid":"PR:Q10294"}


id: MONDO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the epididymis.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epididymitis","termid":"MONDO:0004779"},{"relation_name":"is_a","term_name":"male genital tuberculosis","termid":"MONDO:0006845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous epididymitis","secondary_identifiers":["ICD9:016.41","icd11.foundation:1092166548","ICD9:016.40","ICD9:016.42","MEDGEN:509077","UMLS:C0152814","ICD9:016.46","ICD9:016.4","SCTID:83652003","DOID:1251"],"termid":"MONDO:0001537","xrefs":{"Monarch":{"xref_id":"0001537"}}}


id: PBO:0073985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 24 member 5","termid":"PBO:0073985"}


id: PBO:0062063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 1","termid":"PBO:0062063"}


id: PBO:0081926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 968, pseudogene","termid":"PBO:0081926"}


id: PBO:0081174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 19","termid":"PBO:0081174"}


id: MOD:00778
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 182.9-183.0 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 182.9-183.0 Da","termid":"MOD:00778"}


id: MONDO:0010890
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acro-cardio-facial syndrome (ACFS) is a rare genetic disorder characterized by split-hand/split-foot malformation (SHFM), facial anomalies, cleft lip/palate, congenital heart defect (CHD), genital anomalies, and intellectual deficit.","definition_xrefs":["Orphanet:2008"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrocardiofacial syndrome","secondary_identifiers":["MESH:C563936","OMIM:600460","UMLS:C1838121","GARD:1167","DOID:0070419","icd11.foundation:976844546","MEDGEN:324947"],"synonyms":[{"name":"ACFS","type":"exact"},{"name":"CCGE","type":"related"},{"name":"CCGE syndrome","type":"exact"},{"name":"acrocardiofacial syndrome","type":"exact"},{"name":"cleft palate, CARDIAC defect, genital anomalies, and ectrodactyly","type":"related"},{"name":"cleft palate-cardiac defect-genital anomalies-ectrodactyly syndrome","type":"exact"}],"termid":"MONDO:0010890","xrefs":{"Monarch":{"xref_id":"0010890"}}}


id: PR:O36017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lip2 gene.","definition_xrefs":["UniProtKB:O36017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octanoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.05c","synonyms":[{"name":"Spom972h-lip2","type":"exact"},{"name":"lipoate biosynthesis protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoate-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoyl ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoyl/octanoyl transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36017"}


id: PBO:0049851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hdc homolog, cell cycle regulator","termid":"PBO:0049851"}


id: PBO:0031130
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_filament_morphology","termid":"PBO:0031130"}


id: MONDO:0100086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition affecting an unborn or newly born individual, where the perinatal period is defined in humans as commencing at 22 completed weeks (154 days) of gestation and ending seven completed days after birth. Other, broader definitions of perinatal period cover five months before birth to one month after birth.","definition_xrefs":["NCIT:C35095","Wikipedia:Perinatal_mortality"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perinatal disease","secondary_identifiers":["ICD10CM:P00-P96","MEDGEN:75717","UMLS:C0270075","EFO:0010238"],"synonyms":[{"name":"perinatal condition","type":"exact"},{"name":"perinatal disorder","type":"exact"}],"termid":"MONDO:0100086","xrefs":{"Monarch":{"xref_id":"0100086"}}}


id: GO:1904332
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112068],"is_not":false,"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:22761594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down regulation of error-prone translesion synthesis","type":"exact"},{"name":"down regulation of mutagenic PRR","type":"exact"},{"name":"down regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone translesion synthesis","type":"exact"},{"name":"down-regulation of mutagenic PRR","type":"exact"},{"name":"down-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone translesion synthesis","type":"exact"},{"name":"downregulation of mutagenic PRR","type":"exact"},{"name":"downregulation of mutagenic postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone translesion synthesis","type":"narrow"},{"name":"inhibition of mutagenic PRR","type":"narrow"},{"name":"inhibition of mutagenic postreplication DNA repair","type":"related"},{"name":"negative regulation of error-prone postreplication DNA repair","type":"related"},{"name":"negative regulation of mutagenic PRR","type":"exact"},{"name":"negative regulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904332","terms_by_termid":{"GO:1904332":null}}


id: PBO:0084263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein with type-III transmembrane domains; required for maintenance of ER zinc homeostasis; required for post-translational SRP-independent protein translocation into the ER; necessary for efficient targeting of Trm1p tRNA methyltransferase to the inner nuclear membrane; mutations cause defects in cortical ER morphology in both the mother and daughter cells","termid":"PBO:0084263"}


id: PBO:0028756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028756"}


id: PBO:0058730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6858","termid":"PBO:0058730"}


id: GO:0180001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cyclic di-AMP nucleotide.","definition_xrefs":["PMID:32843560","PMID:36629470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic-di-AMP binding","synonyms":[{"name":"cyclic dimeric adenosine monophosphate binding","type":"exact"}],"termid":"GO:0180001"}


