# terms

id: PBO:0001355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 (predicted)","termid":"PBO:0001355"}


id: PBO:0038458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adeno-associated virus integration site 1","termid":"PBO:0038458"}


id: MOD:00719
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that oxygenates an L-methionine residue to one of the diastereomeric L-methionine sulfoxide residues.","definition_xrefs":["RESID:AA0581","PubMed:22116028","DeltaMass:177","PubMed:21406390","OMSSA:1","Unimod:35#M"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-methionine","termid":"MOD:00709"},{"relation_name":"is_a","term_name":"sulfur monooxygenated residue","termid":"MOD:01854"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"L-methionine S-oxide","type":"exact"},{"name":"L-methionine sulfoxide","type":"exact"},{"name":"MOD_RES Methionine sulfoxide","type":"exact"},{"name":"MetO","type":"exact"},{"name":"Methionyl Sulfoxide","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"oxym","type":"exact"}],"termid":"MOD:00719"}


id: PBO:0031450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pre-replicative_complex_assembly","termid":"PBO:0031450"}


id: FYPO:0003774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cDNA derived from transposon-encoded genes measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:10022921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal level of transposon-derived cDNA in cell","synonyms":[{"name":"normal cellular level of transposon-derived cDNA","type":"exact"},{"name":"normal level of transposon-derived cDNA in cell during mitotic cell cycle","type":"related"},{"name":"normal level of transposon-derived cDNA in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003774"}


id: GO:0098722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity.","definition_xrefs":["GOC:dos","PMID:18513950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"asymmetric stem cell division","termid":"GO:0098722"}


id: PBO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L38 (predicted)","termid":"PBO:0000770"}


id: GO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of events leading from the formation of activated factor X to the formation of active thrombin, the cleavage of fibrinogen by thrombin, and the formation of cleaved fibrin into a stable multimeric, cross-linked complex.","definition_xrefs":["GOC:pde","GOC:mah","PMID:1931959","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"blood coagulation, common pathway","termid":"GO:0072377"}


id: MONDO:0003075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma involving both eyes. This occurs in the majority of patients with the inherited variant. A minority of patient with bilateral retinoblastoma were found to have involvement of the pineal gland as well.","definition_xrefs":["NCIT:C8713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"bilateral retinoblastoma","secondary_identifiers":["NANDO:2201038","DOID:4650","UMLS:C0854914","MEDGEN:163163"],"termid":"MONDO:0003075","xrefs":{"Monarch":{"xref_id":"0003075"}}}


id: MONDO:0027677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoniazid toxicity","secondary_identifiers":["Orphanet:240887"],"termid":"MONDO:0027677","xrefs":{"Monarch":{"xref_id":"0027677"}}}


id: GO:0090326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of the self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:kmv","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of locomotion","termid":"GO:0040017"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of locomotion involved in locomotory behavior","termid":"GO:0090325"},{"relation_name":"positively_regulates","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of locomotion involved in locomotory behavior","termid":"GO:0090326"}


id: PBO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_tRNA_methyltransferase_activity","termid":"PBO:0030433"}


id: GO:0043174
data:
  {"annotated_genes":["SJAG_03881","SJAG_02179","SJAG_05029","SJAG_01781","SJAG_00134","SJAG_06634","SJAG_01070","SJAG_01859","SJAG_03096","SJAG_04264"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98911,98912],"is_not":false,"summary":null,"term":"GO:0043174"},{"annotations":[117135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[94097,73848,61950,66869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[114118,98065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"}]},"cv_name":"biological_process","definition":"Any process which produces a nucleotide, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose (a deoxyribonucleotide), from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"},{"relation_name":"is_a","term_name":"metabolic compound salvage","termid":"GO:0043094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_05029":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nucleoside salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0043174","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0043097":null,"GO:0043174":null}}


id: MONDO:0022687
data:
  {"annotated_genes":["SJAG_04622","SJAG_05212","SJAG_02680","SJAG_02196","SJAG_04641","SJAG_01317","SJAG_01438","SJAG_00380","SJAG_01945","SJAG_03720","SJAG_01286","SJAG_04822","SJAG_02084","SJAG_02885","SJAG_00087","SJAG_02119","SJAG_03692","SJAG_01400","SJAG_03862","SJAG_01179","SJAG_03393","SJAG_00059","SJAG_04233","SJAG_02242","SJAG_01168","SJAG_00686","SJAG_01356","SJAG_00645","SJAG_02457","SJAG_04418","SJAG_00863","SJAG_04533","SJAG_05332","SJAG_00421","SJAG_00933","SJAG_00526","SJAG_02377","SJAG_03923"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[85783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[85758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[87147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[86660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[87380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[87060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[85519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[85632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[86808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[85374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[86522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[87136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[87455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[86348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[86036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[85600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[86114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[85552,85553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[85538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[85999,85998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[86193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[86643,86642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[87506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[85777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[85848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[86916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[86678,86679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[86685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[85956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86967,86966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[86102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"Degeneration of the cerebellum. It may be an inherited condition, a paraneoplastic syndrome, or secondary to autoimmune disorders.","definition_xrefs":["NCIT:C84624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00087":null,"SJAG_00380":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00645":null,"SJAG_00686":null,"SJAG_00863":null,"SJAG_00933":null,"SJAG_01168":null,"SJAG_01179":null,"SJAG_01286":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01400":null,"SJAG_01438":null,"SJAG_01945":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02242":null,"SJAG_02377":null,"SJAG_02457":null,"SJAG_02680":null,"SJAG_02885":null,"SJAG_03393":null,"SJAG_03692":null,"SJAG_03720":null,"SJAG_03862":null,"SJAG_03923":null,"SJAG_04233":null,"SJAG_04418":null,"SJAG_04533":null,"SJAG_04622":null,"SJAG_04641":null,"SJAG_04822":null,"SJAG_05212":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebellar degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75496","SCTID:95646004","DOID:1443","UMLS:C0262404","ICD9:331.9","SCTID:418143002"],"synonyms":[{"name":"Brain degeneration","type":"exact"},{"name":"cerebellar Degeneration","type":"exact"},{"name":"cerebellar degeneration","type":"exact"},{"name":"cerebellum neurodegenerative disease","type":"exact"},{"name":"cerebral degeneration","type":"related"},{"name":"neurodegenerative disease of cerebellum","type":"exact"}],"termid":"MONDO:0022687","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008458":null,"MONDO:0008840":null,"MONDO:0008943":null,"MONDO:0010524":null,"MONDO:0010547":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011402":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0011801":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0012784":null,"MONDO:0013392":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014104":null,"MONDO:0014417":null,"MONDO:0014503":null,"MONDO:0014557":null,"MONDO:0014601":null,"MONDO:0014744":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0018996":null,"MONDO:0030312":null,"MONDO:0030318":null,"MONDO:0030323":null,"MONDO:0032923":null,"MONDO:0033115":null,"MONDO:0033482":null,"MONDO:0044720":null,"MONDO:0100340":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0022687"}}}


id: PBO:0116197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mad2 receptor at unattached kinetochores, Mad1","termid":"PBO:0116197"}


id: PR:Q9C0Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe3 gene.","definition_xrefs":["UniProtKB:Q9C0Z1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB24D3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.01","synonyms":[{"name":"Spom972h-toe3","type":"exact"}],"termid":"PR:Q9C0Z1"}


id: PR:O74310
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.05 gene.","definition_xrefs":["UniProtKB:O74310","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COBW domain-containing protein C15D4.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.05","synonyms":[{"name":"Spom972h-SPBC15D4.05","type":"exact"}],"termid":"PR:O74310"}


id: GO:0010845
data:
  {"annotated_genes":["SJAG_00266","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89402],"is_not":false,"summary":null,"term":"GO:0010845"},{"annotations":[108281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reciprocal meiotic recombination","termid":"GO:0010520"},{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"positive regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of meiotic recombination","type":"related"}],"termid":"GO:0010845","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: PBO:0040962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 33","termid":"PBO:0040962"}


id: MONDO:0018088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial Mediterranean fever (FMF) is an autoinflammatory disorder characterized by recurrent short episodes of fever and serositis resulting in pain in the abdomen, chest, joints and muscles.","definition_xrefs":["Orphanet:342"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial Mediterranean fever","secondary_identifiers":["NCIT:C84707","NORD:1130","SCTID:12579009","UMLS:C0031069","GARD:6421","ICD9:277.31","MedDRA:10016207","NANDO:2200431","MEDGEN:45811","icd11.foundation:1373335705","MESH:D010505","DOID:2987","NANDO:1200863"],"synonyms":[{"name":"FMF","type":"exact"},{"name":"Fiebre mediterránea familiar","type":"exact"},{"name":"benign paroxysmal peritonitis","type":"exact"},{"name":"benign recurrent polyserositis","type":"exact"},{"name":"familial paroxysmal polyserositis","type":"exact"},{"name":"periodic disease","type":"exact"}],"termid":"MONDO:0018088","xrefs":{"Monarch":{"xref_id":"0018088"}}}


id: PBO:0089324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase (Nem1-Spo7 complex) catalytic subunit Nem1","termid":"PBO:0089324"}


id: PBO:0090874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2340, human C2orf76 ortholog, implicated in mitochondrial organisation","termid":"PBO:0090874"}


id: GO:0060126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a somatotropin secreting cell. A somatotropin secreting cell is an acidophilic cell of the anterior pituitary that produces growth hormone, somatotropin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatotropin secreting cell differentiation","synonyms":[{"name":"growth hormone secreting cell differentiation","type":"exact"},{"name":"somatotrope differentiation","type":"related"},{"name":"somatotroph differentiation","type":"related"},{"name":"somatotrophin secreting cell differentiation","type":"exact"},{"name":"somatotropic cell differentiation","type":"related"},{"name":"somatrophic cell differentiation","type":"related"}],"termid":"GO:0060126"}


id: PBO:0001996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding protein upregulated in meiosis II (predicted)","termid":"PBO:0001996"}


id: MONDO:0013157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of FKRP","termid":"MONDO:0016156"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"},{"relation_name":"is_a","term_name":"myopathy caused by variation in FKRP","termid":"MONDO:0700066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0024322","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A5","secondary_identifiers":["MEDGEN:461763","OMIM:613153","GARD:15625","DOID:0111241","UMLS:C3150413"],"synonyms":[{"name":"MDDGA5","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, FKRP-related","type":"related"},{"name":"muscle-eye-brain-FKRP related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 5","type":"related"}],"termid":"MONDO:0013157","xrefs":{"Monarch":{"xref_id":"0013157"}}}


id: MONDO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Baraitser Rodeck garner syndrome (obsolete MONDO:0021971)","termid":"MONDO:0021971","xrefs":{"Monarch":{"xref_id":"0021971"}}}


id: PBO:0040430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase copper transporting alpha","termid":"PBO:0040430"}


id: GO:1902460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:TermGenie","GOC:pm","PMID:18672106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902460"}


id: GO:0030471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dynamics of the spindle pole body and microtubule cytoskeleton during the cell cycle. Includes spindle pole body duplication and separation and formation and elongation of the mitotic spindle. As in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751).","definition_xrefs":["ISBN:0879693649"],"gene_count":0,"genotype_count":0,"name":"obsolete spindle pole body and microtubule cycle (sensu Fungi) (obsolete GO:0030471)","synonyms":[{"name":"spindle pole body and microtubule cycle (sensu Fungi)","type":"exact"},{"name":"spindle pole body and microtubule cycle (sensu Saccharomyces)","type":"narrow"}],"termid":"GO:0030471"}


id: GO:0034762
data:
  {"annotated_genes":["SJAG_04469","SJAG_02605","SJAG_05346","SJAG_03591","SJAG_00296","SJAG_03631","SJAG_03970","SJAG_04920","SJAG_04990","SJAG_00991","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113668,91557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[88431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[88432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"},{"annotations":[102463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"},{"annotations":[90268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[92081,110850,93675,99204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93676,99205,92082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[93677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"},{"annotations":[99720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"},{"annotations":[106710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03631":null,"SJAG_03970":null,"SJAG_04469":null,"SJAG_04551":null,"SJAG_04920":null,"SJAG_04990":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of membrane transport","type":"exact"}],"termid":"GO:0034762","terms_by_termid":{"GO:0035432":null,"GO:1902267":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905665":null,"GO:1905949":null,"GO:2000185":null}}


id: PBO:0070426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 4","termid":"PBO:0070426"}


id: PBO:0063724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor membrane component 2","termid":"PBO:0063724"}


id: PBO:0027070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_phenotype","termid":"PBO:0027070"}


id: PBO:0084845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homolog of human Bcl-2 interacting protein BMRP","termid":"PBO:0084845"}


id: MONDO:0012066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 1","secondary_identifiers":["MESH:C538261","UMLS:C1843687","OMIM:608583","MEDGEN:334469"],"synonyms":[{"name":"ATFB1","type":"exact"},{"name":"atrial fibrillation, autosomal dominant","type":"broad"},{"name":"atrial fibrillation, familial, 1","type":"exact"}],"termid":"MONDO:0012066","xrefs":{"Monarch":{"xref_id":"0012066"}}}


id: GO:0097292
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving XMP, xanthosine monophosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"XMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"XMP metabolism","type":"exact"}],"termid":"GO:0097292","terms_by_termid":{"GO:0032265":null}}


id: GO:0120125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex responsible for the catalysis of the reaction: 4-N-(N-acetyl-D-glucosaminyl)-protein + H2O = N-acetyl-beta-D-glucosaminylamine + peptide L-aspartate. This reaction is the hydrolysis of an N4-(acetyl-beta-D-glucosaminyl)asparagine residue in which the N-acetyl-D-glucosamine residue may be further glycosylated, to yield a (substituted) N-acetyl-beta-D-glucosaminylamine and the peptide containing an aspartic residue.","definition_xrefs":["GOC:lnp","PMID:15964983","PMID:16249333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PNGase complex","termid":"GO:0120125"}


id: PBO:0076826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 5D","termid":"PBO:0076826"}


id: PBO:0078153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 31 (pseudogene)","termid":"PBO:0078153"}


id: MONDO:0006424
data:
  {"annotated_genes":["SJAG_00289","SJAG_03689","SJAG_05346","SJAG_04213","SJAG_00490","SJAG_04755","SJAG_05313","SJAG_00991","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[87283,87284,87285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[85540,85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87677,87676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[87290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm that arises from the soft tissue. The most common types are lipomatous (fatty), vascular, smooth muscle, fibrous, and fibrohistiocytic neoplasms.","definition_xrefs":["NCIT:C3377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective and soft tissue neoplasm","termid":"MONDO:0044334"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00490":null,"SJAG_00991":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null,"SJAG_05346":null},"genotype_count":0,"is_obsolete":false,"name":"soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:SOFTTISSUE","EFO:1000541","MEDGEN:11495","SCTID:387837005","UMLS:C0037579"],"synonyms":[{"name":"SOFTTISSUE","type":"related"},{"name":"neoplasm of soft tissue","type":"exact"},{"name":"neoplasm of the soft tissue","type":"exact"},{"name":"soft tissue neoplasm","type":"exact"},{"name":"soft tissue tumor","type":"exact"},{"name":"soft tissue tumors","type":"exact"},{"name":"soft tissue tumour","type":"exact"},{"name":"soft tissue tumours","type":"exact"},{"name":"tumor of soft tissue","type":"exact"},{"name":"tumor of the soft tissue","type":"exact"},{"name":"tumour of soft tissue","type":"exact"},{"name":"tumour of the soft tissue","type":"exact"}],"termid":"MONDO:0006424","terms_by_termid":{"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0006424"}}}


id: PBO:0059482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage scavenger receptor 1","termid":"PBO:0059482"}


id: GO:0009883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 660-730nm. The response may involve a change in conformation.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor activity","termid":"GO:0009881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"red or far-red light photoreceptor activity","synonyms":[{"name":"red/far-red light photoreceptor activity","type":"exact"}],"termid":"GO:0009883"}


id: PR:O60078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tyr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.04c","synonyms":[{"name":"PRDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tyr1","type":"exact"}],"termid":"PR:O60078"}


id: GO:1902053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["PMID:23368997","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polyketide biosynthetic process","termid":"GO:1900732"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of neosartoricin biosynthetic process","synonyms":[{"name":"regulation of neosartoricin anabolism","type":"exact"},{"name":"regulation of neosartoricin biosynthesis","type":"exact"},{"name":"regulation of neosartoricin formation","type":"exact"},{"name":"regulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902053"}


id: GO:0120043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The shaft comprises the majority of the length of the stereocilium. This region is notable for the extreme stability of actin filaments, which are highly crosslinked into a parallel bundle.","definition_xrefs":["PMID:20170899","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium","termid":"GO:0032420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilium shaft","termid":"GO:0120043"}


id: MONDO:0011648
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation-induced meningioma","secondary_identifiers":["GARD:8491","OMIM:606190","MESH:C536266","UMLS:C1853554","MEDGEN:381204"],"synonyms":[{"name":"Mnri","type":"related"},{"name":"meningioma, radiation-induced","type":"related"},{"name":"radiation induced meningioma","type":"related"}],"termid":"MONDO:0011648","xrefs":{"Monarch":{"xref_id":"0011648"}}}


id: GO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-proline + 2-oxoglutarate + O2 = cis-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"proline 3-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.11.28-RXN","RHEA:20265"],"synonyms":[{"name":"L-proline,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"P-3-H","type":"related"}],"termid":"GO:0033763"}


id: MONDO:0011182
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"A rare inborn error of metabolism characterized by the presence of large amounts of trimethylamine in urine, sweat, and breath, resulting in a fishy body odor in affected individuals.","direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylglycine dehydrogenase deficiency","termid":"MONDO:0011610"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"trimethylaminuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:237959005","Orphanet:35056","HP:0003614","icd11.foundation:685690588","MEDGEN:83350","UMLS:C0342739"],"synonyms":[{"name":"TMAU","type":"related"},{"name":"TMAuria","type":"related"},{"name":"fish malodor syndrome","type":"related"},{"name":"fish odor syndrome","type":"exact"},{"name":"fish odour syndrome","type":"exact"},{"name":"fish-odor syndrome","type":"exact"},{"name":"stale fish syndrome","type":"related"},{"name":"trimethylaminuria","type":"exact"},{"name":"trimethylaminuria (disease)","type":"exact"}],"termid":"MONDO:0011182","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0011182"}}}


id: MONDO:0007852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Palmoplantar keratoderma-deafness syndrome is a keratinization disorder characterized by focal or diffuse palmoplantar keratoderma. A patchy distribution is observed with accentuation on the thenars, hypothenars and the arches of the feet. The disease becomes apparent in infancy and is associated with sensorineural hearing loss that shows a variable age of onset. Due to genetic and clinical similarities, it has been proposed that palmoplantar keratoderma-deafness syndrome, knuckle pads-leukonychia-sensorineural deafness-palmoplantar hyperkeratosis syndrome and keratoderma hereditarium mutilans may represent variants of one broad disorder of syndromic deafness with heterogeneous phenotype. The disease is transmitted in an autosomal dominant manner with incomplete penetrance.","definition_xrefs":["Orphanet:2202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-deafness syndrome","secondary_identifiers":["DOID:0111505","GARD:3094","UMLS:C1835672","MEDGEN:332030","MESH:C536152","OMIM:148350"],"synonyms":[{"name":"PPK-deafness syndrome","type":"exact"},{"name":"diffuse palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"focal palmoplantar keratoderma with sensorineural deafness (subtype)","type":"related"},{"name":"hereditary palmoplantar keratoderma with deafness (subtype)","type":"related"},{"name":"keratoderma palmoplantar deafness","type":"related"},{"name":"keratoderma palmoplantar, with deafness","type":"related"},{"name":"keratoderma, palmoplantar, with deafness","type":"related"},{"name":"palmoplantar hyperkeratosis-deafness syndrome","type":"exact"},{"name":"palmoplantar hyperkeratosis-hearing loss syndrome","type":"exact"},{"name":"palmoplantar keratoderma and sensorineural deafness","type":"related"},{"name":"palmoplantar keratoderma-hearing loss syndrome","type":"exact"}],"termid":"MONDO:0007852","xrefs":{"Monarch":{"xref_id":"0007852"}}}


id: GO:0050461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxypyridine + O-acetyl-L-serine = 3-(3,4-dihydroxypyridinium-1-yl)-L-alanine + acetate.","definition_xrefs":["RHEA:12693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"L-mimosine synthase activity","secondary_identifiers":["KEGG_REACTION:R04091","EC:2.5.1.52","MetaCyc:RXN-7461"],"synonyms":[{"name":"3-O-acetyl-L-serine:3,4-dihydroxypyridine 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"O(3)-acetyl-L-serine acetate-lyase (adding 3,4-dihydroxypyridin-1-yl) activity","type":"related"},{"name":"O3-acetyl-L-serine acetate-lyase (adding 3,4-dihydroxypyridin-1-yl)","type":"related"},{"name":"O3-acetyl-L-serine:3,4-dihydroxypyridine 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"}],"termid":"GO:0050461"}


id: FYPO:0003986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of an amino acid measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered cellular amino acid level during vegetative growth","termid":"FYPO:0003984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular amino acid level","synonyms":[{"name":"increased cellular amino acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular amino acid level during vegetative growth","type":"exact"}],"termid":"FYPO:0003986"}


id: PBO:0116409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 5","termid":"PBO:0116409"}


id: PBO:0076473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAO kinase 1","termid":"PBO:0076473"}


id: PBO:0072484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 13","termid":"PBO:0072484"}


id: PBO:0063853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol binding clathrin assembly protein","termid":"PBO:0063853"}


id: PBO:0051802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain ArfGEF 1","termid":"PBO:0051802"}


id: PBO:0038930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRL3 antisense RNA 1","termid":"PBO:0038930"}


id: PBO:0041122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 6","termid":"PBO:0041122"}


id: GO:1903761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization.","definition_xrefs":["GO_REF:0000059","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","PMID:18337493","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (obsolete GO:1903761)","synonyms":[{"name":"down regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"down-regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"down-regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"downregulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"exact"},{"name":"downregulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"inhibition of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"inhibition of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"negative regulation of voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"negative regulation of voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1903761"}


id: PBO:0109814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bcap family homolog, vesicle-mediated transport factor","termid":"PBO:0109814"}


id: GO:1904341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of colon smooth muscle contraction.","definition_xrefs":["GOC:TermGenie","PMID:24170253","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904304"},{"relation_name":"regulates","term_name":"colon smooth muscle contraction","termid":"GO:1990765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of colon smooth muscle contraction","termid":"GO:1904341"}


id: GO:1902228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage colony-stimulating factor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:16705167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor signaling pathway","termid":"GO:1902226"},{"relation_name":"positively_regulates","term_name":"macrophage colony-stimulating factor signaling pathway","termid":"GO:0038145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"activation of M-CSF signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signaling pathway","type":"narrow"},{"name":"activation of macrophage colony-stimulating factor signalling pathway","type":"narrow"},{"name":"positive regulation of M-CSF signaling pathway","type":"exact"},{"name":"positive regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up regulation of M-CSF signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"up-regulation of M-CSF signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"up-regulation of macrophage colony-stimulating factor signalling pathway","type":"exact"},{"name":"upregulation of M-CSF signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signaling pathway","type":"exact"},{"name":"upregulation of macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:1902228"}


id: GO:0015123
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79035],"is_not":false,"summary":null,"term":"GO:0015123"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acetate from one side of a membrane to the other. Acetate is the 2-carbon carboxylic acid ethanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"acetate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015123","terms_by_termid":{"GO:0015123":null}}


id: MONDO:0859290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial apolipoprotein gene cluster deletion syndrome","secondary_identifiers":["MEDGEN:1824091","OMIM:620058","UMLS:C5774318"],"termid":"MONDO:0859290","xrefs":{"Monarch":{"xref_id":"0859290"}}}


id: PBO:0011524
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements a double-deletion of S. cerevisiae CYC1 and CYC7","termid":"PBO:0011524"}


id: MONDO:0008606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Say-Field-Coldwell syndrome is characterized by triphalangeal thumbs, brachydactyly, camptodactyly, recurrent dislocation of the patellas and relatively short stature. It has been described in a mother and her three daughters.","definition_xrefs":["Orphanet:3133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Say-field-Coldwell syndrome","secondary_identifiers":["GARD:242","MEDGEN:348711","MESH:C536619","OMIM:190650","UMLS:C1860805"],"synonyms":[{"name":"polydactyly with triphalangeal thumbs, brachydactyly, camptodactyly, congenital dislocation of the patellas, short stature and borderline intelligence","type":"related"},{"name":"triphalangeal thumbs and dislocation of patella","type":"related"},{"name":"triphalangeal thumbs-dislocation of patella syndrome","type":"exact"}],"termid":"MONDO:0008606","xrefs":{"Monarch":{"xref_id":"0008606"}}}


id: GO:1901269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipooligosaccharide.","definition_xrefs":["UniPathway:UPA00501","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide metabolic process","synonyms":[{"name":"lipooligosaccharide metabolism","type":"exact"}],"termid":"GO:1901269"}


id: PR:Q9HDT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein P20C8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.02c","synonyms":[{"name":"Spom972h-SPCP20C8.02c","type":"exact"}],"termid":"PR:Q9HDT7"}


id: PBO:0027231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_stationary_phase","termid":"PBO:0027231"}


id: PBO:0090014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein GPR107/GPR108-like","termid":"PBO:0090014"}


id: PATO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000126 absolute mass (obsolete PATO:0000126)","termid":"PATO:0000126"}


id: PBO:0027422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027422"}


id: PBO:0062891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like zinc finger 3","termid":"PBO:0062891"}


id: MONDO:1012749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the FAM161A gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, FAM161A-related, dog","secondary_identifiers":["OMIA:001918-9615"],"termid":"MONDO:1012749","xrefs":{"Monarch":{"xref_id":"1012749"}}}


id: PBO:0086114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cold tolerance; involved in phosphate uptake; YCR015C is not an essential gene","termid":"PBO:0086114"}


id: MONDO:1011574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, horse","secondary_identifiers":["OMIA:000181-9796"],"termid":"MONDO:1011574","xrefs":{"Monarch":{"xref_id":"1011574"}}}


id: PBO:0045102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 2 like","termid":"PBO:0045102"}


id: SO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"incomplete transcript variant","type":"exact"}],"termid":"SO:0002075"}


id: MONDO:0008349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis, atrial septal defect, and unique electrocardiographic abnormalities","secondary_identifiers":["MESH:C566733","MEDGEN:357274","OMIM:178650","UMLS:C1867407"],"synonyms":[{"name":"Ciuffo syndrome","type":"related"},{"name":"pulmonic stenosis, atrial septal defect, and unique electrocardiographic abnormalities","type":"exact"}],"termid":"MONDO:0008349","xrefs":{"Monarch":{"xref_id":"0008349"}}}


id: MONDO:0000794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a beta-lactam.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-lactam allergy (obsolete MONDO:0000794)","secondary_identifiers":["DOID:0060519"],"synonyms":[{"name":"allergy of beta-lactam","type":"exact"},{"name":"beta-lactam allergic disease","type":"exact"}],"termid":"MONDO:0000794","xrefs":{"Monarch":{"xref_id":"0000794"}}}


id: PBO:0080335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 99 pseudogene","termid":"PBO:0080335"}


id: GO:1903873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA recombinase mediator complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:rb","GOC:TermGenie","PMID:18347097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase mediator complex assembly","termid":"GO:1903872"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase mediator complex assembly","termid":"GO:1903871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of DNA recombinase mediator complex assembly","synonyms":[{"name":"down regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"down-regulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex assembly","type":"exact"},{"name":"downregulation of DNA recombinase mediator complex formation","type":"exact"},{"name":"inhibition of DNA recombinase mediator complex assembly","type":"narrow"},{"name":"inhibition of DNA recombinase mediator complex formation","type":"narrow"},{"name":"negative regulation of DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903873"}


id: PBO:0074471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin","termid":"PBO:0074471"}


id: PBO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine-tRNA protein transferase (predicted)","termid":"PBO:0001323"}


id: PR:Q10063
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yam8 gene.","definition_xrefs":["UniProtKB:Q10063","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium influx-promoting protein ehs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.08c","synonyms":[{"name":"Spom972h-yam8","type":"exact"}],"termid":"PR:Q10063"}


id: MONDO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by exposure to slate dust.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slate pneumoconiosis","secondary_identifiers":["NCIT:C35397","SCTID:1259003","DOID:10330","ICD9:502","MEDGEN:83300","UMLS:C0340186"],"synonyms":[{"name":"Schistosis","type":"exact"}],"termid":"MONDO:0001004","xrefs":{"Monarch":{"xref_id":"0001004"}}}


id: GO:0014053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid secretion","termid":"GO:0014052"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"down regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid secretion","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid secretion","type":"narrow"},{"name":"negative regulation of GABA secretion","type":"exact"}],"termid":"GO:0014053"}


id: PBO:0085854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene","termid":"PBO:0085854"}


id: MONDO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tungiasis (obsolete MONDO:0000300)","termid":"MONDO:0000300","xrefs":{"Monarch":{"xref_id":"0000300"}}}


id: PBO:0084266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; forms a complex with Ssp120p that may function in trafficking plasma membrane glycoproteins through early secretory pathway; EMP47 has a paralog, EMP46, that arose from the whole genome duplication","termid":"PBO:0084266"}


id: GO:0045023
data:
  {"annotated_genes":["SJAG_03689","SJAG_03356","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118391,99887,116283],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle phase transition whose occurrence commits the cell from the G0 quiescent state to the G1 phase. Under certain conditions, cells exit the cell cycle during G1 and remain in the G0 state as nongrowing, non-dividing (quiescent) cells. Appropriate stimulation of such cells induces them to return to G1 and resume growth and division. The G0 to G1 transition is accompanied by many changes in the program of gene expression.","definition_xrefs":["ISBN:0716731363","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045023","terms_by_termid":{"GO:0070317":null}}


id: GO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation","termid":"GO:0050678"}


id: MOD:00416
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A change resulting in an alteration of the measured molecular mass of a peptide or protein hydroxyl amino acid phosphorylated promptly followed by secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["Unimod:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with neutral loss of phosphate","termid":"MOD:00432"},{"relation_name":"is_a","term_name":"dehydrated residue","termid":"MOD:00704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","synonyms":[{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"}],"termid":"MOD:00416"}


id: PBO:0073845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member B1","termid":"PBO:0073845"}


id: MONDO:0800503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental and epileptic encephalopathy caused by variation in the TMEM63B gene. This disorder is characterised by early-onset drug-resistant epilepsy, with moderate-to-profound intellectual disability, severe motor impairment and brain structural anomalies. Most patients present early generalised hypotonia, nystagmus and central visual impairment, severe dysphagia and haematological abnormalities.","definition_xrefs":["PMID:37421948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"TMEM63B-related developmental and epileptic encephalopathy with anemia","synonyms":[{"name":"TMEM63B-related DEE with anaemia","type":"exact"},{"name":"TMEM63B-related DEE with anemia","type":"exact"},{"name":"TMEM63B-related developmental and epileptic encephalopathy with anaemia","type":"exact"}],"termid":"MONDO:0800503","xrefs":{"Monarch":{"xref_id":"0800503"}}}


id: PBO:0055458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2890","termid":"PBO:0055458"}


id: PR:Q9P7K6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC21C3.19 gene.","definition_xrefs":["UniProtKB:Q9P7K6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDO1-like protein C21C3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.19","synonyms":[{"name":"Spom972h-SPBC21C3.19","type":"exact"}],"termid":"PR:Q9P7K6"}


id: MONDO:0958262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated primary pigmented nodular adrenocortical disease","secondary_identifiers":["MEDGEN:1853165","UMLS:C5816750","Orphanet:647772"],"termid":"MONDO:0958262","xrefs":{"Monarch":{"xref_id":"0958262"}}}


id: PR:Q9P7A1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PITH domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITH domain-containing protein P35G2.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.02","secondary_identifiers":["UniProtKB:Q9P7A1"],"synonyms":[{"name":"Spom972h-PITHD1","type":"exact"}],"termid":"PR:Q9P7A1"}


id: PBO:0110305
data:
  {"annotation_feature_type":"gene","cv_name":"feature_pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_pub_source","termid":"PBO:0110305"}


id: PBO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylation disorders","termid":"PBO:0002647"}


id: PBO:0077952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 10-1","termid":"PBO:0077952"}


id: GO:1901437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toluene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"toluene metabolic process","termid":"GO:0018970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of toluene metabolic process","synonyms":[{"name":"regulation of methylbenzene metabolic process","type":"exact"},{"name":"regulation of methylbenzene metabolism","type":"exact"},{"name":"regulation of toluene metabolism","type":"exact"}],"termid":"GO:1901437"}


id: GO:0060260
data:
  {"annotated_genes":["SJAG_00342","SJAG_03590","SJAG_04647","SJAG_04099","SJAG_03573","SJAG_02391","SJAG_04705","SJAG_01952","SJAG_02551","SJAG_00297","SJAG_01771","SJAG_03622","SJAG_03421","SJAG_01403","SJAG_00909","SJAG_02494","SJAG_02849","SJAG_05203","SJAG_04820","SJAG_00904","SJAG_00766","SJAG_00150","SJAG_05341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90049,79924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[106368,109064,94786,87795,106557,99001,96196,109037,119230,106018,102274,91019,106690,95715,103992,94676,115035,99350,115598,90706,103731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:tb","GOC:dph","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription initiation","termid":"GO:2000142"},{"relation_name":"regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-212436"],"synonyms":[{"name":"regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060260","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: GO:0008679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-glycerate + NADP+ = 2-hydroxy-3-oxopropanoate + NADPH + H+.","definition_xrefs":["EC:1.1.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-hydroxy-3-oxopropionate reductase activity","secondary_identifiers":["MetaCyc:TSA-REDUCT-RXN"],"synonyms":[{"name":"(R)-glycerate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"tartronate semialdehyde reductase (NADPH) activity","type":"related"}],"termid":"GO:0008679"}


id: PBO:0089713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Dbl2","termid":"PBO:0089713"}


id: MONDO:1012971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disturbances in growth processes leading to reduced height in non-human animals.","definition_xrefs":["PMID:28697878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, non-human animal","termid":"MONDO:1012971","xrefs":{"Monarch":{"xref_id":"1012971"}}}


id: GO:0102781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + isofucosterol + O2 + NADPH = (22alpha)-hydroxy-isofucosterol + H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isofucosterol hydroxylase activity (obsolete GO:0102781)","termid":"GO:0102781"}


id: PBO:0004487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php5","termid":"PBO:0004487"}


id: PBO:0016961
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CDA1","termid":"PBO:0016961"}


id: PR:O14238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01147","PANTHER:PTHR10705:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit ost2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.05","secondary_identifiers":["UniProtKB:O14238"],"synonyms":[{"name":"Spom972h-DAD1","type":"exact"},{"name":"oligosaccharyl transferase 16 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oligosaccharyl transferase subunit epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14238"}


id: MOD:00363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-selenocysteine residues to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:12911312","RESID:AA0358#SEC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"},{"relation_name":"is_a","term_name":"crosslinked L-selenocysteine residue","termid":"MOD:02061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Sec)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00363"}


id: PR:P22189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cta3 gene.","definition_xrefs":["UniProtKB:P22189","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.06","synonyms":[{"name":"Spom972h-cta3","type":"exact"}],"termid":"PR:P22189"}


id: PBO:0081454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 321, pseudogene","termid":"PBO:0081454"}


id: FYPO:0002276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level","termid":"FYPO:0000835"},{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased protein degradation","synonyms":[{"name":"increased protein breakdown","type":"exact"},{"name":"increased protein catabolic process","type":"exact"},{"name":"increased protein catabolism","type":"exact"}],"termid":"FYPO:0002276"}


id: MONDO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant soft tissue neoplasm primarily involving the thyroid gland.","definition_xrefs":["NCIT:C6041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid cancer","termid":"MONDO:0002108"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid sarcoma","secondary_identifiers":["MEDGEN:234950","UMLS:C1336756","DOID:4515"],"synonyms":[{"name":"sarcoma of the thyroid","type":"exact"},{"name":"sarcoma of the thyroid gland","type":"exact"},{"name":"sarcoma of thyroid","type":"exact"},{"name":"sarcoma of thyroid gland","type":"exact"},{"name":"thyroid gland sarcoma","type":"exact"},{"name":"thyroid sarcoma","type":"exact"}],"termid":"MONDO:0003028","xrefs":{"Monarch":{"xref_id":"0003028"}}}


id: GO:1903494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dehydroepiandrosterone stimulus.","definition_xrefs":["GOC:TermGenie","PMID:3585228","GOC:mr","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dehydroepiandrosterone","termid":"GO:1903494"}


id: FYPO:0003045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC1R boundary element.","definition_xrefs":["PomBase:mah","PMID:24013502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC1R","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC1R during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC1R during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC1R","type":"exact"}],"termid":"FYPO:0003045"}


id: PR:O74738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set10 gene.","definition_xrefs":["UniProtKB:O74738","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase set10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.13c","synonyms":[{"name":"SET domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set10","type":"exact"}],"termid":"PR:O74738"}


id: SO:0002135
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rearranges at the DNA level and codes the diversity region of the variable domain of aT-cell receptor gene.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_D_Gene","synonyms":[{"name":"T_cell_receptor_D_gene","type":"exact"}],"termid":"SO:0002135"}


id: GO:0061476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anticoagulant stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anticoagulant","termid":"GO:0061476"}


id: PBO:0078001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3 interacting protein 2","termid":"PBO:0078001"}


id: GO:0090357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of L-tryptophan metabolic process","synonyms":[{"name":"regulation of tryptophan metabolic process","type":"related"},{"name":"regulation of tryptophan metabolism","type":"exact"}],"termid":"GO:0090357"}


id: GO:0090355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"positively_regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin metabolic process","synonyms":[{"name":"positive regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090355"}


id: GO:0042501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group to a serine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["GOC:jl","PMID:10918594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"},{"relation_name":"part_of","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serine phosphorylation of STAT protein","secondary_identifiers":["GO:0033136"],"synonyms":[{"name":"serine phosphorylation of STAT3 protein","type":"narrow"}],"termid":"GO:0042501"}


id: PBO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription","termid":"PBO:0034627"}


id: MONDO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An auditory system disease that is characterized by a thin retracted ear drum becomes sucked into the middle-ear space and stuck (i.e., adherent) to the ossicles and other bones of the middle ear.","definition_xrefs":["Wikipedia:Otitis_media#Adhesive_otitis_media","DOID:11235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesive otitis media","secondary_identifiers":["ICD9:385.1","ICD9:385.10","MEDGEN:509984","UMLS:C0155478","SCTID:7699004","ICD10CM:H74.1"],"synonyms":[{"name":"adhesive middle ear disease","type":"exact"},{"name":"adhesive otitis media","type":"exact"},{"name":"chronic adhesive otitis media","type":"exact"},{"name":"fibrotic adhesive otitis media","type":"related"}],"termid":"MONDO:0001234","xrefs":{"Monarch":{"xref_id":"0001234"}}}


id: PBO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 1B","termid":"PBO:0047601"}


id: SO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A purine-rich sequence in the group I introns which determines the locations of the splice sites in group I intron splicing and has catalytic activity.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"},{"relation_name":"part_of","term_name":"group_I_intron","termid":"SO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_guide_sequence","synonyms":[{"name":"IGS","type":"exact"},{"name":"internal guide sequence","type":"exact"}],"termid":"SO:0001016"}


id: PBO:0064277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology, MyTH4 and FERM domain containing H3","termid":"PBO:0064277"}


id: SO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000764 BAC_clone (obsolete SO:0000764)","termid":"SO:0000764"}


id: PBO:0113235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitrogen-responsive activator of Start; nuclear microprotein with transcriptional activator activity; bypasses Start arrest in a cln3 bck2 double mutant when overexpressed; interacts with subunits of the SBF complex (Swi4p-Swi6p); induced by nitrogen limitation and rapamycin with peak abundance at Start; proposed to promote the G1/S transition by rewiring the G1/S transcriptional machinery under poor nitrogen conditions upstream of the Whi5-inhibited form of SBF and independent of Cln3 and Bck2","termid":"PBO:0113235"}


id: MOD:00639
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphate labeled with biotin-HPDP","synonyms":[{"name":"Thiophos-S-S-biotin","type":"related"},{"name":"thiophosphate labeled with biotin-HPDP","type":"related"}],"termid":"MOD:00639"}


id: PBO:0044295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC4 antisense RNA 1","termid":"PBO:0044295"}


id: PBO:0039631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyloxyacyl hydrolase","termid":"PBO:0039631"}


id: PBO:0074312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 antisense RNA 1","termid":"PBO:0074312"}


id: GO:0019701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-arginine on the internal nitrogen-5 (N5) atom (also called delta-nitrogen) to form peptidyl-N5-methyl-L-arginine.","definition_xrefs":["RESID:AA0305","GOC:bf","PMID:9792625"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine N5-methylation (obsolete GO:0019701)","synonyms":[{"name":"peptidyl-arginine delta-N-methylation","type":"exact"}],"termid":"GO:0019701"}


id: PBO:0051110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-58","termid":"PBO:0051110"}


id: MONDO:0700176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that occurs in cats. It is associated with exposure to feline leukemia virus and feline immunodeficiency virus.","definition_xrefs":["NCIT:C132193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline lymphoma","secondary_identifiers":["OMIA:001733-9685"],"termid":"MONDO:0700176","xrefs":{"Monarch":{"xref_id":"0700176"}}}


id: MONDO:0010746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thumbs, congenital Clasped","secondary_identifiers":["MEDGEN:98140","OMIM:314100","UMLS:C0431886"],"synonyms":[{"name":"Clasped thumbs, congenital","type":"related"},{"name":"adducted thumbs syndrome","type":"related"},{"name":"thumbs, congenital Clasped","type":"exact"}],"termid":"MONDO:0010746","xrefs":{"Monarch":{"xref_id":"0010746"}}}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: GO:0043562
data:
  {"annotated_genes":["SJAG_03256","SJAG_00781","SJAG_04725","SJAG_03309","SJAG_00256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[104148],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901481"},{"annotations":[103117,104151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901482"},{"annotations":[101707,88191],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of inorganic nitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_00781":null,"SJAG_03256":null,"SJAG_03309":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrogen levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043562","terms_by_termid":{"GO:0031142":null,"GO:1901481":null,"GO:1901482":null,"GO:1905287":null}}


id: PBO:0070813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 43","termid":"PBO:0070813"}


id: MONDO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lateral epicondyle.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone inflammation disease","termid":"MONDO:0002614"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epicondylitis","secondary_identifiers":["MESH:D013716","UMLS:C0014488","NCIT:C34589","ICD10CM:M77.1","SCTID:202855006","ICD9:726.32","EFO:1001887","MEDGEN:4090","DOID:14087"],"synonyms":[{"name":"andrel epicondylitis","type":"exact"},{"name":"archer's elbow","type":"exact"},{"name":"ectepicondyle of humerus inflammation","type":"exact"},{"name":"golfer's elbow","type":"exact"},{"name":"hockey elbow","type":"exact"},{"name":"inflammation of ectepicondyle of humerus","type":"exact"},{"name":"lateral epicondylitis","type":"exact"},{"name":"medial epicondylitis","type":"exact"},{"name":"shooter's elbow","type":"related"},{"name":"tennis elbow","type":"related"}],"termid":"MONDO:0001875","xrefs":{"Monarch":{"xref_id":"0001875"}}}


id: MONDO:0015590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic paraneoplastic limbic encephalitis is a rare neuroimmunological disorder characterized by the sudden onset of seizures, progressive memory impairment (which may develop into dementia) and psychiatric manifestations (e.g. depression, personality changes, loss of social inhibition) associated with cancer (most commonly small-cell carcinoma of the lung) in the absence of tumor cell invasion of the nervous system. Other reported features include ataxia, dystonia, paresthesia, tremors, paranoid ideation, and hallucinations. The presence of antibodies that act on neuronal antigens (such as anti-Hu, anti-Ma2, anti-amphiphysin) are typically observed.","definition_xrefs":["Orphanet:163898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraneoplastic limbic encephalitis","termid":"MONDO:0015589"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic paraneoplastic limbic encephalitis","synonyms":[{"name":"classic paraneoplastic limbic encephalitis, with or without intracellular antigens","type":"exact"}],"termid":"MONDO:0015590","xrefs":{"Monarch":{"xref_id":"0015590"}}}


id: PBO:0080676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 3","termid":"PBO:0080676"}


id: MONDO:0017638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Manganese poisoning is associated with chronic inhalation of manganese particles by individuals who work with manganese ore. Clinical features include confusion; hallucinations; and an extrapyramidal syndrome (parkinson disease, secondary) that includes rigidity; dystonia; retropulsion; and tremor. (Adams, Principles of Neurology, 6th ed, p1213)","definition_xrefs":["MESH:D020149"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare parkinsonian syndrome due to intoxication (obsolete MONDO:0017637)","termid":"MONDO:0017637"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese poisoning","secondary_identifiers":["GARD:21264","MedDRA:10058951","SCTID:88687001","Orphanet:306682","EFO:1001808","ICD9:503"],"synonyms":[{"name":"Manganism","type":"exact"},{"name":"manganese intoxication","type":"exact"}],"termid":"MONDO:0017638","xrefs":{"Monarch":{"xref_id":"0017638"}}}


id: GO:0097378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A dorsal spinal cord interneuron is an interneuron located in the dorsal part of the spinal cord.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord interneuron axon guidance","termid":"GO:0097377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal spinal cord interneuron axon guidance","synonyms":[{"name":"dorsal interneuron axon guidance","type":"exact"}],"termid":"GO:0097378"}


id: GO:0048335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"is_a","term_name":"negative regulation of cell fate determination","termid":"GO:1905934"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell fate determination","synonyms":[{"name":"down regulation of mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of mesodermal cell fate determination","type":"exact"},{"name":"downregulation of mesodermal cell fate determination","type":"exact"},{"name":"inhibition of mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048335"}


id: GO:1903830
data:
  {"annotated_genes":["SJAG_04111","SJAG_02578","SJAG_03516","SJAG_00211","SJAG_02484","SJAG_01639"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[56930,57454,62590,117270],"is_not":false,"summary":null,"term":"GO:1903830"},{"annotations":[75838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[77678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium ion across a membrane.","definition_xrefs":["PMID:11254124","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transport","termid":"GO:0015693"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"magnesium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903830","terms_by_termid":{"GO:0045016":null,"GO:1903830":null,"GO:1990616":null}}


id: MONDO:0004459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hepatoid adenocarcinoma that involves the urinary bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder adenocarcinoma","termid":"MONDO:0002751"},{"relation_name":"is_a","term_name":"hepatoid adenocarcinoma","termid":"MONDO:0006243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder hepatoid adenocarcinoma","secondary_identifiers":["MEDGEN:267739","UMLS:C1511189","DOID:8097","NCIT:C39838"],"synonyms":[{"name":"bladder hepatoid adenocarcinoma","type":"exact"}],"termid":"MONDO:0004459","xrefs":{"Monarch":{"xref_id":"0004459"}}}


id: PBO:0068044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 349","termid":"PBO:0068044"}


id: PBO:0039383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelotin","termid":"PBO:0039383"}


id: PBO:0054127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1493","termid":"PBO:0054127"}


id: PBO:0042168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 scaffold protein","termid":"PBO:0042168"}


id: GO:0052387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates programmed cell death in the symbiont, where programmed cell death proceeds by apoptosis. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont apoptosis (obsolete GO:0052387)","synonyms":[{"name":"activation by organism of symbiont apoptosis","type":"exact"},{"name":"activation by organism of symbiont apoptotic programmed cell death","type":"exact"},{"name":"induction by organism of symbiont apoptosis","type":"exact"},{"name":"induction by organism of symbiont apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052387"}


id: PBO:0050728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 14","termid":"PBO:0050728"}


id: PBO:0033804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_cell_cycle_arrest_in_response_to_nitrogen_starvation","termid":"PBO:0033804"}


id: GO:1905395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22700048","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to flavonoid","termid":"GO:1905395"}


id: GO:0019367
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77950,92283],"is_not":false,"summary":null,"term":"GO:0019367"}]},"cv_name":"biological_process","definition":"Elongation of a saturated fatty acid chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid elongation","termid":"GO:0030497"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty acid elongation, saturated fatty acid","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:FASYN-ELONG-PWY"],"termid":"GO:0019367","terms_by_termid":{"GO:0019367":null}}


id: GO:0033406
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UCC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"UCC codon-amino acid adaptor activity","synonyms":[{"name":"TCC codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033406"}


id: MOD:00017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to a glycine.","definition_xrefs":["ChEBI:29947","DeltaMass:0","RESID:AA0008","PubMed:6692818","PubMed:1310545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine residue","synonyms":[{"name":"Gly","type":"exact"},{"name":"aminoacetic acid","type":"exact"},{"name":"aminoethanoic acid","type":"exact"},{"name":"azanylethanoic acid","type":"exact"},{"name":"glycine","type":"exact"},{"name":"glycocoll","type":"exact"}],"termid":"MOD:00017"}


id: PBO:0075256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 9","termid":"PBO:0075256"}


id: PBO:0073758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 12","termid":"PBO:0073758"}


id: GO:0006213
data:
  {"annotated_genes":["SJAG_04264","SJAG_01673","SJAG_03213","SJAG_00957","SJAG_00694","SJAG_05029","SJAG_03771","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105819,107576],"is_not":false,"summary":null,"term":"GO:0006213"},{"annotations":[70274,70176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"},{"annotations":[90993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"},{"annotations":[114118,98065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[73715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl","ISBN:0140512713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic process","termid":"GO:0072527"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_00885":null,"SJAG_00957":null,"SJAG_01673":null,"SJAG_03213":null,"SJAG_03771":null,"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine metabolic process","type":"broad"},{"name":"pyrimidine metabolism","type":"broad"},{"name":"pyrimidine nucleoside metabolism","type":"exact"}],"termid":"GO:0006213","terms_by_termid":{"GO:0006213":null,"GO:0009972":null,"GO:0043097":null,"GO:0046132":null,"GO:0046135":null}}


id: PBO:0057389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548c","termid":"PBO:0057389"}


id: GO:1900562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dehydroaustinol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"dehydroaustinol metabolic process","termid":"GO:1900561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"dehydroaustinol catabolic process","synonyms":[{"name":"dehydroaustinol breakdown","type":"exact"},{"name":"dehydroaustinol catabolism","type":"exact"},{"name":"dehydroaustinol degradation","type":"exact"}],"termid":"GO:1900562"}


id: SO:0001098
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with magnesium ions.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_magnesium_ion_contact_site","secondary_identifiers":["BS:00187"],"synonyms":[{"name":"Mg_contact_site","type":"exact"},{"name":"polypeptide magnesium ion contact site","type":"exact"}],"termid":"SO:0001098"}


id: PBO:0075731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 14","termid":"PBO:0075731"}


id: PR:Q9US13
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10539:SF0","OMA:SCHPO00842","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.05","secondary_identifiers":["UniProtKB:Q9US13"],"synonyms":[{"name":"Spom972h-PSMD13","type":"exact"}],"termid":"PR:Q9US13"}


id: MONDO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hardening of the kidney due to infiltration by fibrous connective tissue (fibrosis), usually caused by renovascular diseases or chronic hypertension. Nephrosclerosis leads to renal ischemia.","definition_xrefs":["MESH:D009400"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"renal hypertension","termid":"MONDO:0001105"},{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrosclerosis","secondary_identifiers":["UMLS:C0027719","EFO:1000041","icd11.foundation:1878591797","DOID:11664","MEDGEN:14330","ICD9:587","SCTID:32916005"],"synonyms":[{"name":"renal sclerosis","type":"exact"}],"termid":"MONDO:0006044","xrefs":{"Monarch":{"xref_id":"0006044"}}}


id: MONDO:0008075
data:
  {"annotated_genes":["SJAG_04213","SJAG_01111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87661,87662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"The least frequent form of the rare genetic disorder neurofibromatosis. It is clinically and genetically distinct from NF1 and NF2 and is characterized by the development of multiple schwannomas (nerve sheath tumors), without involvement of the vestibular nerves. NF3 develops in adulthood and is often associated with chronic pain. Dysesthesia and paresthesia may also be present. Common localizations include the spine, peripheral nerves, and the cranium.","definition_xrefs":["Orphanet:93921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"neurofibromatosis","termid":"MONDO:0021061"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"schwannomatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:237.73","OMIMPS:162091","NCIT:C6557","DOID:3204","MEDGEN:234775","GARD:4768","ICDO:9560/1","UMLS:C1335929"],"synonyms":[{"name":"NF3","type":"exact"},{"name":"Neurinomatosis","type":"exact"},{"name":"Schwannomatosis","type":"exact"},{"name":"congenital cutaneous neurilemmomatosis","type":"related"},{"name":"neurilemmomatosis","type":"exact"},{"name":"neurilemmomatosis congenital cutaneous","type":"related"},{"name":"neurilemmomatosis, congenital cutaneous","type":"related"},{"name":"neurinoma","type":"related"},{"name":"neurofibromatosis type 3","type":"exact"},{"name":"schwannomatosis","type":"exact"},{"name":"schwannomatosis, NEC","type":"narrow"},{"name":"schwannomatosis, NOS","type":"narrow"}],"termid":"MONDO:0008075","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0008075"}}}


id: PBO:0057738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1468","termid":"PBO:0057738"}


id: PBO:0080445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 2","termid":"PBO:0080445"}


id: MONDO:0009561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-mannosidosis is an inherited lysosomal storage disorder characterized by immune deficiency, facial and skeletal abnormalities, hearing impairment, and intellectual deficit.","definition_xrefs":["Orphanet:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0002561","MONDO:0037792"],"is_obsolete":false,"name":"alpha-mannosidosis","secondary_identifiers":["OMIM:248500","GARD:6968","NCIT:C84548","SCTID:65524005","icd11.foundation:1944256516","MEDGEN:7467","NORD:755","MESH:D008363","NANDO:1200126","DOID:3413","UMLS:C0024748","ICD9:271.8"],"synonyms":[{"name":"Alpha mannosidase B deficiency","type":"related"},{"name":"Alpha-D-mannosidosis","type":"exact"},{"name":"Alpha-mannosidase B deficiency","type":"related"},{"name":"MANSA","type":"related"},{"name":"alpha-mannosidase deficiency","type":"exact"},{"name":"alpha-mannosidosis","type":"exact"},{"name":"deficiency of alpha-mannosidase","type":"exact"},{"name":"lysosomal Alpha-D-mannosidase deficiency","type":"related"},{"name":"lysosomal alpha-D-mannosidase deficiency","type":"exact"},{"name":"mannosidosis, ALPHA B, lysosomal","type":"related"},{"name":"mannosidosis, alpha B lysosomal","type":"related"},{"name":"mannosidosis, alpha-, types I and II","type":"exact"}],"termid":"MONDO:0009561","xrefs":{"Monarch":{"xref_id":"0009561"}}}


id: PBO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2 pseudogene 1","termid":"PBO:0075224"}


id: GO:0038017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of a Wnt receptor from the plasma membrane to the inside of the cell.","definition_xrefs":["PMID:17908284","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"Wnt receptor internalization","synonyms":[{"name":"Wnt receptor endocytosis","type":"broad"}],"termid":"GO:0038017"}


id: PBO:0017525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 2, Gim4(predicted)","termid":"PBO:0017525"}


id: PBO:0069069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 316, pseudogene","termid":"PBO:0069069"}


id: PBO:0030624
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_maltase_activity","termid":"PBO:0030624"}


id: GO:0002324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division as part of an immune response.","definition_xrefs":["PMID:15032583","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell proliferation","termid":"GO:0001787"},{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation involved in immune response","synonyms":[{"name":"NK cell proliferation during immune response","type":"related"},{"name":"natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0002324"}


id: GO:2001124
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational frameshifting","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:2001124","terms_by_termid":{"GO:2001125":null}}


id: PBO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 domain containing 1","termid":"PBO:0044304"}


id: MONDO:0013490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 2A","secondary_identifiers":["DOID:0080318","GARD:15728","OMIM:613925","MEDGEN:462705","UMLS:C3151355"],"synonyms":[{"name":"MLC2A","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 2A","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts type 2A","type":"exact"}],"termid":"MONDO:0013490","xrefs":{"Monarch":{"xref_id":"0013490"}}}


id: GO:0047877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,2S)-ephedrine + NAD+ = (R)-2-methylimino-1-phenylpropan-1-ol + 2 H+ + NADH.","definition_xrefs":["RHEA:16289","EC:1.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ephedrine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03614","MetaCyc:EPHEDRINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(-)-ephedrine:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047877"}


id: GO:1903440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of amylin receptor activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:12037140","GOC:TermGenie","PMID:18687416","PMID:10871296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"amylin receptor complex","termid":"GO:1903440"}


id: PBO:0087124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of a Cet1p homodimer and two molecules of guanylyltransferase Ceg1p; Cet1p also has a role in regulation of RNAPII pausing at promoter-proximal sites; interaction between Cet1p and Ceg1p is required for Ceg1p nuclear import; mammalian enzyme is single bifunctional polypeptide; human homolog RNGTT can complement yeast cet1 null mutant","termid":"PBO:0087124"}


id: GO:1902031
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[76376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NADP metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:23334421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NADP metabolic process","termid":"GO:0006739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"regulation of NADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"related"},{"name":"regulation of NADP (oxidized) metabolic process","type":"exact"},{"name":"regulation of NADP (oxidized) metabolism","type":"exact"},{"name":"regulation of NADP (reduced) metabolic process","type":"exact"},{"name":"regulation of NADP (reduced) metabolism","type":"exact"},{"name":"regulation of NADP metabolism","type":"exact"},{"name":"regulation of NADPH metabolic process","type":"exact"},{"name":"regulation of NADPH metabolism","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of oxidized NADP metabolic process","type":"exact"},{"name":"regulation of oxidized NADP metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of reduced NADP metabolic process","type":"exact"},{"name":"regulation of reduced NADP metabolism","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"}],"termid":"GO:1902031","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: PBO:0069779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1064, pseudogene","termid":"PBO:0069779"}


id: PBO:0011115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic dynein intermediate light chain Dli1/Dil1","termid":"PBO:0011115"}


id: GO:0051702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An interaction between two organisms living together in more or less intimate association. The term symbiont is used for the smaller (macro) of the two members of a symbiosis; the various forms of symbiosis include parasitism, commensalism and mutualism.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interaction with symbiont","synonyms":[{"name":"interaction with symbiont","type":"related"}],"termid":"GO:0051702"}


id: PBO:0072889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strawberry notch homolog 1","termid":"PBO:0072889"}


id: GO:0033315
data:
  {"annotated_genes":["SJAG_04287","SJAG_00364","SJAG_02771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91769,106932,116358],"is_not":false,"summary":null,"term":"GO:0033315"}]},"cv_name":"biological_process","definition":"A signal transduction process that controls the G2/M1 transition of the meiotic cell cycle and prevents the initiation of nuclear division until DNA replication is complete.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"meiotic DNA integrity checkpoint signaling","termid":"GO:0044778"},{"relation_name":"is_a","term_name":"negative regulation of G2/MI transition of meiotic cell cycle","termid":"GO:0110031"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_04287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"meiotic G2/MI DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072440"],"synonyms":[{"name":"meiotic G2/MI DNA replication checkpoint","type":"exact"},{"name":"meiotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic DNA replication checkpoint","type":"exact"}],"termid":"GO:0033315","terms_by_termid":{"GO:0033315":null}}


id: PBO:0052602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 divergent transcript","termid":"PBO:0052602"}


id: PBO:0040462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase 13A4","termid":"PBO:0040462"}


id: PBO:0089336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, pyruvate Mpc1","termid":"PBO:0089336"}


id: PBO:0113743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 6","termid":"PBO:0113743"}


id: PR:O94255
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nce103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.05c","synonyms":[{"name":"Spom972h-nce103","type":"exact"},{"name":"carbonate dehydratase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94255"}


id: GO:1902221
data:
  {"annotated_genes":["SJAG_03312","SJAG_04652","SJAG_03167","SJAG_05007","SJAG_01455","SJAG_03124","SJAG_02505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98671,78271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[73644,77555,74590,79586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[79128,77018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving erythrose 4-phosphate/phosphoenolpyruvate family amino acid.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_04652":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolism","type":"exact"}],"termid":"GO:1902221","terms_by_termid":{"GO:0000162":null,"GO:0006571":null,"GO:0009094":null}}


id: PBO:0056944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-3 host gene","termid":"PBO:0056944"}


id: PBO:0084052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein for polarity-regulator Cdc42p (RhoGAP); required for proper bud site selection; transiently localizes to previous cell division sites (bud scars; cytokinesis remnants), interacting with Nis1p and Nba1p, to prevent Cdc42p repolarization; implicated in control of septin organization, pheromone response, and haploid invasive growth; relocalizes from the bud neck to cytoplasm upon DNA replication stress; contains N-terminal LIM domains and a C-terminal GAP domain","termid":"PBO:0084052"}


id: GO:0052350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates induced systemic resistance in the symbiont; induced systemic resistance is a response that confers broad spectrum systemic resistance to disease and that does not depend upon salicylic acid signaling. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of induced systemic resistance in symbiont (obsolete GO:0052350)","synonyms":[{"name":"activation by organism of ISR in symbiont","type":"exact"},{"name":"activation by organism of induced systemic resistance in symbiont","type":"exact"},{"name":"induction by organism of ISR in symbiont","type":"exact"},{"name":"induction by organism of induced systemic resistance in symbiont","type":"exact"}],"termid":"GO:0052350"}


id: PBO:0078643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-1","termid":"PBO:0078643"}


id: MONDO:0008532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth present at birth","secondary_identifiers":["SCTID:21995002","UMLS:C0027443","MEDGEN:10268","OMIM:187050","HP:0000695"],"synonyms":[{"name":"Natal teeth","type":"related"},{"name":"teeth present AT birth","type":"related"},{"name":"teeth present at birth","type":"exact"},{"name":"teeth present at birth (disease)","type":"exact"}],"termid":"MONDO:0008532","xrefs":{"Monarch":{"xref_id":"0008532"}}}


id: PBO:0079787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A8","termid":"PBO:0079787"}


id: PBO:0078492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 11-1","termid":"PBO:0078492"}


id: PBO:0079945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USO1 vesicle transport factor","termid":"PBO:0079945"}


id: SO:1000149
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal mutation whereby the (large) region between the first two breaks listed is lost, and the two flanking segments (one of them centric) are joined as a translocation to the free ends resulting from the third break.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"},{"relation_name":"is_a","term_name":"intrachromosomal_duplication","termid":"SO:1000038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite_duplication","synonyms":[{"name":"(Drosophila)bDp","type":"related"},{"name":"bipartite duplication","type":"exact"}],"termid":"SO:1000149"}


id: GO:0030195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"negative regulation of coagulation","termid":"GO:0050819"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"is_a","term_name":"negative regulation of hemostasis","termid":"GO:1900047"},{"relation_name":"negatively_regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood coagulation","synonyms":[{"name":"down regulation of blood coagulation","type":"exact"},{"name":"down-regulation of blood coagulation","type":"exact"},{"name":"downregulation of blood coagulation","type":"exact"},{"name":"inhibition of blood coagulation","type":"narrow"}],"termid":"GO:0030195"}


id: FYPO:0000707
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific molecular function is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal molecular function","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0000707","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: PBO:0028373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028373"}


id: GO:1990248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:15660129"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990248)","termid":"GO:1990248"}


id: PBO:0075870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 10","termid":"PBO:0075870"}


id: PBO:0017557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase), Dnf1 (predicted)","termid":"PBO:0017557"}


id: PBO:0062349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 2 pseudogene","termid":"PBO:0062349"}


id: PBO:0065313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 36","termid":"PBO:0065313"}


id: GO:0033883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxal 5'-phosphate + H2O = pyridoxal + phosphate.","definition_xrefs":["EC:3.1.3.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"pyridoxal phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.74-RXN","RHEA:20533"],"synonyms":[{"name":"PLP phosphatase activity","type":"related"},{"name":"PNP phosphatase activity","type":"related"},{"name":"pyridoxal-5'-phosphate phosphohydrolase activity","type":"related"},{"name":"vitamin B6 (pyridoxine) phosphatase activity","type":"broad"},{"name":"vitamin B6-phosphate phosphatase activity","type":"broad"}],"termid":"GO:0033883"}


id: MONDO:0020561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myxoid/round cell liposarcoma (MRCLS) is a type of liposarcoma (LS) mostly located in the limbs, with a variable behavior depending on the histological subtype. Both myxoid and round cell are distinct histological subtypes of LS.","definition_xrefs":["Orphanet:99967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid/round cell liposarcoma","secondary_identifiers":["GARD:7157","MEDGEN:107784","UMLS:C0545074","ONCOTREE:MRLS"],"synonyms":[{"name":"MRCLS","type":"exact"},{"name":"myxoid/round-cell liposarcoma","type":"exact"}],"termid":"MONDO:0020561","xrefs":{"Monarch":{"xref_id":"0020561"}}}


id: PBO:0034031
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session_submitted_date","termid":"PBO:0034031"}


id: GO:0030315
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Invagination of the plasma membrane of a muscle cell that extends inward from the cell surface around each myofibril. The ends of T-tubules make contact with the sarcoplasmic reticulum membrane.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sarcolemma","termid":"GO:0042383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"T-tubule","secondary_identifiers":["Wikipedia:T-tubule"],"synonyms":[{"name":"transverse tubule","type":"exact"},{"name":"triad","type":"related"}],"termid":"GO:0030315"}


id: PBO:0088660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 7, Pre10","termid":"PBO:0088660"}


id: PBO:0117028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPIN2 antisense RNA 2","termid":"PBO:0117028"}


id: PBO:0058071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4290","termid":"PBO:0058071"}


id: PBO:0031543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_prospore_membrane","termid":"PBO:0031543"}


id: PBO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seg1-Like Eisosome protein","termid":"PBO:0016907"}


id: PBO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member B","termid":"PBO:0047230"}


id: GO:0097381
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stack of disc membranes located inside a photoreceptor outer segment, and containing densely packed molecules of photoreceptor proteins that traverse the lipid bilayer. Disc membranes arise as evaginations of the ciliary membrane during the development of the outer segment and may or may not remain contiguous with the ciliary membrane.","definition_xrefs":["PMID:6771304","PMID:11826267","PMID:7507907","GOC:krc","PMID:2537204","PMID:26574505","GOC:bj","GOC:pde","PMID:19501669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"photoreceptor outer segment","termid":"GO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor disc membrane","termid":"GO:0097381"}


id: PBO:0078374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalase pseudogene 1","termid":"PBO:0078374"}


id: GO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter during mitotic cell cycle (obsolete GO:0046022)","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"mitotic activation of transcription from Pol II promoter","type":"exact"},{"name":"positive regulation of transcription from Pol II promoter during mitosis","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, mitotic","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter during mitosis","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter during mitosis","type":"exact"}],"termid":"GO:0046022"}


id: PBO:0055469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2902","termid":"PBO:0055469"}


id: GO:0044428
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear part (obsolete GO:0044428)","synonyms":[{"name":"nuclear subcomponent","type":"exact"},{"name":"nucleus component","type":"exact"}],"termid":"GO:0044428"}


id: GO:0036512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the second alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:PARL","PMID:12829701","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of second mannose on A branch (obsolete GO:0036512)","synonyms":[{"name":"conversion of (Man)8A(GlcNAc)2 to (Man)7AA(GlcNAc)2","type":"related"},{"name":"conversion of M8A to M7AA","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036512"}


id: GO:1903582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of basophil degranulation.","definition_xrefs":["GO_REF:0000058","PMID:10880837","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of basophil degranulation","termid":"GO:1903581"},{"relation_name":"negatively_regulates","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of basophil degranulation","synonyms":[{"name":"down regulation of basophil degranulation","type":"exact"},{"name":"down-regulation of basophil degranulation","type":"exact"},{"name":"downregulation of basophil degranulation","type":"exact"},{"name":"inhibition of basophil degranulation","type":"narrow"}],"termid":"GO:1903582"}


id: PR:O42936
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- las1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein las1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.12c","synonyms":[{"name":"Spom972h-las1","type":"exact"}],"termid":"PR:O42936"}


id: PBO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan","termid":"PBO:0000076"}


id: GO:0061728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-mannose from mannose.","definition_xrefs":["GOC:dph","PMID:24218558","PMID:16339137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"GDP-mannose biosynthetic process","termid":"GO:0009298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-mannose biosynthetic process from mannose","termid":"GO:0061728"}


id: GO:0019525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate metabolic process","termid":"GO:0019522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"keto-D-gluconate metabolic process","synonyms":[{"name":"keto-D-gluconate metabolism","type":"exact"}],"termid":"GO:0019525"}


id: GO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve maturation","synonyms":[{"name":"CN I maturation","type":"exact"}],"termid":"GO:0021630"}


id: PBO:0078432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-2","termid":"PBO:0078432"}


id: PBO:0083590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YPR012W is not an essential gene","termid":"PBO:0083590"}


id: FYPO:0004321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"altered DNA level","termid":"FYPO:0004320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered DNA level during vegetative growth","synonyms":[{"name":"abnormal DNA content during vegetative growth","type":"exact"},{"name":"abnormal DNA level during vegetative growth","type":"exact"},{"name":"altered DNA content during vegetative growth","type":"exact"},{"name":"altered DNA level during mitotic cell cycle","type":"related"},{"name":"altered cellular DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004321"}


id: MONDO:0020095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of disease with focal palmoplantar keratoderma as a major feature.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant disease associated with focal palmoplantar keratoderma as a major feature (obsolete MONDO:0020095)","secondary_identifiers":["Orphanet:98353"],"synonyms":[{"name":"autosomal dominant disease associated with focal palmoplantar hyperkeratosis as a major feature","type":"exact"},{"name":"autosomal dominant disease with focal palmoplantar keratoderma as a major feature","type":"exact"},{"name":"disease with focal palmoplantar keratoderma as a major feature, autosomal dominant","type":"exact"}],"termid":"MONDO:0020095","xrefs":{"Monarch":{"xref_id":"0020095"}}}


id: PBO:0026709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MCM_complex_binding","termid":"PBO:0026709"}


id: GO:0015968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A specific global change in the metabolism of a bacterial cell (the downregulation of nucleic acid and protein synthesis, and the simultaneous upregulation of protein degradation and amino acid synthesis) as a result of starvation.","definition_xrefs":["GOC:jl","ISBN:0124325653","PMID:11282471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stringent response","secondary_identifiers":["Wikipedia:Stringent_response"],"termid":"GO:0015968"}


id: PBO:0066805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 104","termid":"PBO:0066805"}


id: PBO:0054259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1644","termid":"PBO:0054259"}


id: MONDO:0024661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm morphologically characterized by the presence of a villous and a tubular architectural pattern. Most often it occurs in the large intestine, small intestine, and the stomach in which the neoplastic epithelial cells show dysplastic features.","definition_xrefs":["NCIT:C4143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulovillous adenoma","secondary_identifiers":["MEDGEN:83125","UMLS:C0334307","ICDO:8263/0"],"synonyms":[{"name":"tubulovillous adenoma","type":"exact"}],"termid":"MONDO:0024661","xrefs":{"Monarch":{"xref_id":"0024661"}}}


id: GO:0060382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA strand elongation","termid":"GO:0060382"}


id: PBO:0003352
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PPT1","termid":"PBO:0003352"}


id: MONDO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital syphilis that is manifested between 0 and 2 years old.","definition_xrefs":["Wikipedia:Congenital_syphilis#Early"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital syphilis","termid":"MONDO:0005714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early congenital syphilis","secondary_identifiers":["ICD9:090.2","UMLS:C0275859","icd11.foundation:108348777","DOID:0050488","SCTID:4359001","MEDGEN:546894"],"synonyms":[{"name":"Early congenital syphilis (less than 2 years)","type":"broad"}],"termid":"MONDO:0000333","xrefs":{"Monarch":{"xref_id":"0000333"}}}


id: GO:0060064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the anterior end of the primitive streak of the embryo that acts as the main signaling center establishing the body plan.","definition_xrefs":["PMID:9442883","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the anterior end of the primitive streak","synonyms":[{"name":"Spemann organizer formation in amniotes","type":"related"},{"name":"Spemann's organizer formation at the anterior end of the primitive streak","type":"exact"},{"name":"Spemann-Mangold organizer formation at the anterior end of the primitive streak","type":"related"}],"termid":"GO:0060064"}


id: GO:0015330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glutamine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"high-affinity basic amino acid transmembrane transporter activity","termid":"GO:0005287"},{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high-affinity glutamine transmembrane transporter activity","synonyms":[{"name":"high affinity glutamine permease activity","type":"related"},{"name":"high affinity glutamine transmembrane transporter activity","type":"exact"}],"termid":"GO:0015330"}


id: PBO:0075737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 5","termid":"PBO:0075737"}


id: PBO:0085531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S29 and bacterial S14; RPS29B has a paralog, RPS29A, that arose from the whole genome duplication","termid":"PBO:0085531"}


id: GO:1900970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sarcinapterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pteridine metabolic process","termid":"GO:0045864"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of sarcinapterin metabolic process","termid":"GO:1900968"},{"relation_name":"positively_regulates","term_name":"sarcinapterin metabolic process","termid":"GO:1900867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sarcinapterin metabolic process","synonyms":[{"name":"activation of sarcinapterin metabolic process","type":"narrow"},{"name":"activation of sarcinapterin metabolism","type":"exact"},{"name":"positive regulation of sarcinapterin metabolism","type":"exact"},{"name":"up regulation of sarcinapterin metabolic process","type":"exact"},{"name":"up regulation of sarcinapterin metabolism","type":"exact"},{"name":"up-regulation of sarcinapterin metabolic process","type":"exact"},{"name":"up-regulation of sarcinapterin metabolism","type":"exact"},{"name":"upregulation of sarcinapterin metabolic process","type":"exact"},{"name":"upregulation of sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900970"}


id: PATO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's having many curves and turns.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sinuous","synonyms":[{"name":"twisted","type":"related"}],"termid":"PATO:0001989"}


id: GO:1900712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of tensidol B biosynthetic process","termid":"GO:1900710"},{"relation_name":"positively_regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tensidol B biosynthetic process","synonyms":[{"name":"activation of tensidol B anabolism","type":"exact"},{"name":"activation of tensidol B biosynthesis","type":"exact"},{"name":"activation of tensidol B biosynthetic process","type":"narrow"},{"name":"activation of tensidol B formation","type":"exact"},{"name":"activation of tensidol B synthesis","type":"exact"},{"name":"positive regulation of tensidol B anabolism","type":"exact"},{"name":"positive regulation of tensidol B biosynthesis","type":"exact"},{"name":"positive regulation of tensidol B formation","type":"exact"},{"name":"positive regulation of tensidol B synthesis","type":"exact"},{"name":"up regulation of tensidol B anabolism","type":"exact"},{"name":"up regulation of tensidol B biosynthesis","type":"exact"},{"name":"up regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up regulation of tensidol B formation","type":"exact"},{"name":"up regulation of tensidol B synthesis","type":"exact"},{"name":"up-regulation of tensidol B anabolism","type":"exact"},{"name":"up-regulation of tensidol B biosynthesis","type":"exact"},{"name":"up-regulation of tensidol B biosynthetic process","type":"exact"},{"name":"up-regulation of tensidol B formation","type":"exact"},{"name":"up-regulation of tensidol B synthesis","type":"exact"},{"name":"upregulation of tensidol B anabolism","type":"exact"},{"name":"upregulation of tensidol B biosynthesis","type":"exact"},{"name":"upregulation of tensidol B biosynthetic process","type":"exact"},{"name":"upregulation of tensidol B formation","type":"exact"},{"name":"upregulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900712"}


id: FYPO:0008089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion fusion is abnormal.","definition_xrefs":["PMID:37590302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrial fusion","termid":"FYPO:0008089"}


id: GO:0052372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"regulates","term_name":"symbiont entry into host","termid":"GO:0044409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by symbiont of entry into host","secondary_identifiers":["GO:0052371"],"synonyms":[{"name":"modulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"regulation by organism of entry into other organism during symbiotic interaction","type":"related"},{"name":"regulation by organism of entry into other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052372"}


id: GO:0071557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from lysine at position 27 of the histone.","definition_xrefs":["GOC:sp","PMID:20023638"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 demethylation (obsolete GO:0071557)","synonyms":[{"name":"H3K27 demethylation","type":"related"}],"termid":"GO:0071557"}


id: PBO:0027893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_unseparated_DNA_and_centromeric_DNA_dissociated_from_spindle","termid":"PBO:0027893"}


id: GO:0071479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ionizing radiation","termid":"GO:0010212"},{"relation_name":"is_a","term_name":"cellular response to radiation","termid":"GO:0071478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ionizing radiation","synonyms":[{"name":"cellular response to ionising radiation","type":"exact"},{"name":"cellular response to ionizing radiation stimulus","type":"exact"}],"termid":"GO:0071479"}


id: MONDO:0012814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diastasis recti and weakness of the linea alba","secondary_identifiers":["MEDGEN:394255","UMLS:C2677303","MESH:C567402","OMIM:612198"],"synonyms":[{"name":"diastasis recti and weakness of the linea alba","type":"exact"}],"termid":"MONDO:0012814","xrefs":{"Monarch":{"xref_id":"0012814"}}}


id: GO:1990138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["PMID:22790009","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection extension","synonyms":[{"name":"neurite extension","type":"narrow"},{"name":"neuron process extension","type":"exact"},{"name":"neuron protrusion extension","type":"exact"},{"name":"neuronal cell projection extension","type":"exact"}],"termid":"GO:1990138"}


id: PR:000036299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PMID:12867051","PMID:20516199","PomBase:MAH","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain","termid":"PR:000027713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC25D12.04","synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom-suc22","type":"exact"}],"termid":"PR:000036299"}


id: GO:2000691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell myoblast differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myoblast differentiation","termid":"GO:0045662"},{"relation_name":"is_a","term_name":"negative regulation of cardioblast differentiation","termid":"GO:0051892"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell myoblast differentiation","termid":"GO:2000690"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell myoblast differentiation","termid":"GO:0060379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell myoblast differentiation","synonyms":[{"name":"negative regulation of cardiac myoblast differentiation","type":"related"},{"name":"negative regulation of myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:2000691"}


id: GO:0075260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of spore-bearing organ development, a process in which hyphae grow into special aggregates called fruiting bodies that produce new spores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of spore-bearing organ development","termid":"GO:0075260"}


id: PBO:0073246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPSECS antisense RNA 1 (head to head)","termid":"PBO:0073246"}


id: GO:0004173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Ecdysone + palmitoyl-CoA = CoA + ecdysone palmitate.","definition_xrefs":["RHEA:15217","EC:2.3.1.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"ecdysone O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02375","MetaCyc:ECDYSONE-O-ACYLTRANSFERASE-RXN"],"synonyms":[{"name":"acyl-CoA:ecdysone acyltransferase activity","type":"related"},{"name":"fatty acyl-CoA:ecdysone acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:ecdysone palmitoyltransferase activity","type":"related"}],"termid":"GO:0004173"}


id: MOD:01558
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["Unimod:730#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01558"}


id: PBO:0076327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptophysin like 1 pseudogene 1","termid":"PBO:0076327"}


id: PBO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 1","termid":"PBO:0060293"}


id: PBO:0031535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcriptional_response_to_pheromone_at_decreased_pheromone_level_(obsolete_FYPO:0000685)","termid":"PBO:0031535"}


id: PBO:0086489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase involved in late endosome to Golgi transport; physical and genetical interactions with Btn2p; null mutant is viable, has extended S phase, and sensitive to expression of top1-T722A allele; similar to human FOXRED1","termid":"PBO:0086489"}


id: GO:1903828
data:
  {"annotated_genes":["SJAG_04597","SJAG_03970","SJAG_02392","SJAG_01311","SJAG_01084","SJAG_01373","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[106136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[91302,96186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[94746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[107547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[114773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[96187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a protein localization.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01084":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cellular protein localisation","type":"exact"},{"name":"down regulation of cellular protein localization","type":"exact"},{"name":"down-regulation of cellular protein localisation","type":"exact"},{"name":"down-regulation of cellular protein localization","type":"exact"},{"name":"downregulation of cellular protein localisation","type":"exact"},{"name":"downregulation of cellular protein localization","type":"exact"},{"name":"inhibition of cellular protein localisation","type":"narrow"},{"name":"inhibition of cellular protein localization","type":"narrow"},{"name":"negative regulation of cellular protein localisation","type":"exact"},{"name":"negative regulation of cellular protein localization","type":"exact"}],"termid":"GO:1903828","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1903067":null,"GO:1903077":null}}


id: GO:1901233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of convergent extension involved in axis elongation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"negatively_regulates","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of convergent extension involved in axis elongation","synonyms":[{"name":"down regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"down-regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"downregulation of convergent extension involved in axis elongation","type":"exact"},{"name":"inhibition of convergent extension involved in axis elongation","type":"narrow"}],"termid":"GO:1901233"}


id: PBO:0061505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurturin","termid":"PBO:0061505"}


id: GO:0070032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, and complexin I (or orthologs thereof).","definition_xrefs":["PMID:7553862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex","synonyms":[{"name":"SNARE complex (Vamp2, Snap25, Stx1a, Cplx1)","type":"narrow"},{"name":"Vamp2-Snap25-Stx1a-Cplx1 complex","type":"narrow"}],"termid":"GO:0070032"}


id: GO:0099175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a postsynapse.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse organization","synonyms":[{"name":"regulation of postsynapse organisation","type":"exact"},{"name":"regulation of postsynapse organization and biogenesis","type":"related"},{"name":"regulation of postsynapse structure","type":"exact"}],"termid":"GO:0099175"}


id: MONDO:0006988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morbid condition due to the presence of sulfmethemoglobin in the blood. It is marked by persistent cyanosis, but the blood count does not reveal any special abnormality in the blood. It is thought to be caused by the action of hydrogen sulfide absorbed from the intestine. (Stedman, 25th ed)","definition_xrefs":["MESH:D013436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobinopathy","termid":"MONDO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sulfhemoglobinemia","secondary_identifiers":["MedDRA:10042481","MEDGEN:52562","EFO:1001200","UMLS:C0038732","SCTID:32117000","DOID:12451"],"synonyms":[{"name":"Sulfemoglobinemia","type":"exact"}],"termid":"MONDO:0006988","xrefs":{"Monarch":{"xref_id":"0006988"}}}


id: GO:0102572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N5-phenyl-L-glutamine + H2O = L-glutamate + aniline + H+.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N-glutamylanilide hydrolase activity","secondary_identifiers":["RHEA:50684","MetaCyc:RXN-15251"],"termid":"GO:0102572"}


id: GO:0010048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of thermal induction in plants in which flowering is promoted by exposure to low temperatures.","definition_xrefs":["GOC:tair_curators","ISBN:0521591392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vernalization response","termid":"GO:0010048"}


id: MONDO:1011037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in Japanese medaka due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, Japanese medaka","secondary_identifiers":["OMIA:001821-8090"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, Japanese medaka","type":"related"}],"termid":"MONDO:1011037","xrefs":{"Monarch":{"xref_id":"1011037"}}}


id: PBO:0031618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposition","termid":"PBO:0031618"}


id: PBO:0091418
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELOVL3","termid":"PBO:0091418"}


id: SO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that can be substituted for a related gene at a different site in the genome.","definition_xrefs":["SGD:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_cassette","secondary_identifiers":["http://en.wikipedia.org/wiki/Gene_cassette"],"synonyms":[{"name":"gene cassette","type":"exact"}],"termid":"SO:0005853"}


id: MONDO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL7-related Bohring-Opitz-like syndrome","secondary_identifiers":["GARD:22436","Orphanet:603689","UMLS:C5680210","MEDGEN:1842955"],"synonyms":[{"name":"KLHL7-related BOS-like syndrome","type":"exact"}],"termid":"MONDO:0035823","xrefs":{"Monarch":{"xref_id":"0035823"}}}


id: PBO:0073777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 10","termid":"PBO:0073777"}


id: PBO:0048934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi transport 1A","termid":"PBO:0048934"}


id: PBO:0061036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 2","termid":"PBO:0061036"}


id: GO:0060100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"is_a","term_name":"positive regulation of membrane invagination","termid":"GO:1905155"},{"relation_name":"positively_regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"}


id: MONDO:0006113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bladder small cell neuroendocrine carcinoma (obsolete MONDO:0006113)","termid":"MONDO:0006113","xrefs":{"Monarch":{"xref_id":"0006113"}}}


id: PBO:0015264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GalactoMannan Synthesis defective","termid":"PBO:0015264"}


id: GO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cardiac muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:jid","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle tissue development","termid":"GO:0014706"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle tissue development","synonyms":[{"name":"heart muscle development","type":"exact"}],"termid":"GO:0048738"}


id: SO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic 2 bp region bordering exon. A splice_site that adjacent_to exon and overlaps intron.","definition_xrefs":["SO:cjm","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis_splice_site","synonyms":[{"name":"cis splice site","type":"exact"}],"termid":"SO:0001419"}


id: GO:0062162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of a pyocyanine biosynthetic process.","definition_xrefs":["PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of pyocyanine biosynthetic process","termid":"GO:0062161"},{"relation_name":"positively_regulates","term_name":"pyocyanine biosynthetic process","termid":"GO:0106220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyocyanine biosynthetic process","synonyms":[{"name":"positive regulation of pyocyanin biosynthetic process","type":"exact"}],"termid":"GO:0062162"}


id: MONDO:0024886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adenofibroma characterized by the presence of serous secretory cells and minute cystic spaces filled with watery fluid. A representative example is the ovarian serous adenofibroma. Cases with epithelial atypia described in the ovary lacking stromal invasion are designated as borderline serous adenofibromas and have a low grade malignant potential.","definition_xrefs":["NCIT:C67090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous adenofibroma","secondary_identifiers":["MEDGEN:87253","UMLS:C0334498","ICDO:9014/0"],"synonyms":[{"name":"serous adenofibroma","type":"exact"}],"termid":"MONDO:0024886","xrefs":{"Monarch":{"xref_id":"0024886"}}}


id: PBO:0082134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin filament binding protein that enhances actin ring formation; IQGAP family member required for assembly and contraction of the AMR, prior to cytokinesis; localizes to the contractile ring during anaphase in an Mlc1p-dependent manner, recruiting Myo1p and Hof1p to the site, and promoting cytokinetic core complex assembly; specifies bud-site selection, localizing axial markers Bud4p and Cdc12p; regulated by Cdc28p; relocalizes from the bud neck to the cytoplasm upon replication stress","termid":"PBO:0082134"}


id: PR:P78790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An electron transfer flavoprotein subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01873","PANTHER:PTHR10909:SF112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.06","secondary_identifiers":["UniProtKB:P78790"],"synonyms":[{"name":"Spom972h-ETFA","type":"exact"},{"name":"alpha-ETF (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78790"}


id: GO:0047179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-radyl-2-acyl-sn-glycero-3-phospholipid + 1-alkyl-2-acetyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-radyl-2-acetyl-sn-glycero-3-phospholipid.","definition_xrefs":["MetaCyc:2.3.1.149-RXN","EC:2.3.1.149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"platelet-activating factor acetyltransferase activity","secondary_identifiers":["RHEA:11048"],"synonyms":[{"name":"1-alkyl-2-acyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phospholipid acetyltransferase activity","type":"related"},{"name":"PAF acetyltransferase activity","type":"exact"}],"termid":"GO:0047179"}


id: FYPO:0009049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methionine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to methionine","synonyms":[{"name":"resistance to methionine during mitotic cell cycle","type":"related"},{"name":"resistance to methionine during vegetative growth","type":"exact"},{"name":"resistant to methionine","type":"exact"}],"termid":"FYPO:0009049"}


id: MONDO:0010592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a polymorphic cutaneous disorder and highly variable anomalies affecting the eyes, teeth, skeleton and the central nervous, urinary, gastrointestinal and cardiovascular systems.","definition_xrefs":["Orphanet:2092"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"mixed dermis disorder","termid":"MONDO:0019294"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal dermal hypoplasia","secondary_identifiers":["icd11.foundation:683166625","GARD:6457","MEDGEN:42055","NCIT:C84715","NORD:1152","ICD9:757.39","UMLS:C0016395","DOID:2120","SCTID:205573006","MESH:D005489","OMIM:305600"],"synonyms":[{"name":"DHOF","type":"related"},{"name":"FDH","type":"related"},{"name":"Fodh","type":"related"},{"name":"Goltz Gorlin syndrome","type":"related"},{"name":"Goltz syndrome","type":"exact"},{"name":"Goltz-Gorlin syndrome","type":"exact"},{"name":"focal dermal hypoplasia","type":"exact"},{"name":"focal dermal hypoplasia, X-linked dominant","type":"exact"}],"termid":"MONDO:0010592","xrefs":{"Monarch":{"xref_id":"0010592"}}}


id: PBO:0081518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF426 divergent transcript","termid":"PBO:0081518"}


id: PBO:0073862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 1","termid":"PBO:0073862"}


id: MONDO:0100524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of disorders that includes Farber disease and spinal muscular atrophy with progressive myoclonic epilepsy. Both disorders are caused by mutations in the ASAH1 gene that encodes the lysosomal hydrolase that breaks down the bioactive lipid, ceramide.","definition_xrefs":["PMID:30029679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"ASAH1-related sphingolipidosis","synonyms":[{"name":"acid ceramidase deficiency","type":"narrow"}],"termid":"MONDO:0100524","xrefs":{"Monarch":{"xref_id":"0100524"}}}


id: PBO:0113284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; mutations in membrane-spanning domains permit cation and histidinol uptake","termid":"PBO:0113284"}


id: GO:0003283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the atrial septum over time, from its initial formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum development","termid":"GO:0003279"},{"relation_name":"part_of","term_name":"cardiac atrium development","termid":"GO:0003230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum development","termid":"GO:0003283"}


id: PBO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_cell_during_nitrogen_starvation","termid":"PBO:0036178"}


id: PBO:0109188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh6","termid":"PBO:0109188"}


id: GO:0043309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of eosinophil degranulation","synonyms":[{"name":"regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043309"}


id: GO:0006267
data:
  {"annotated_genes":["SJAG_00247","SJAG_02074","SJAG_02607"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103638,110872,115325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the nuclear pre-replicative complex, a protein-DNA complex that forms at the eukaryotic DNA replication origin and is required for replication initiation.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in cell cycle DNA replication","termid":"GO:1902299"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0006260","GO:0008150","GO:0065003","GO:0006259"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear pre-replicative complex assembly","type":"exact"},{"name":"pre-RC complex assembly","type":"broad"},{"name":"pre-replicative complex assembly","type":"broad"},{"name":"pre-replicative complex formation","type":"broad"}],"termid":"GO:0006267","terms_by_termid":{"GO:1902985":null}}


id: PBO:0058010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3936 host gene","termid":"PBO:0058010"}


id: PBO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B12","termid":"PBO:0061334"}


id: PBO:0082311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartyl-tRNA synthetase, primarily cytoplasmic; homodimeric enzyme that catalyzes the specific aspartylation of tRNA(Asp); class II aminoacyl tRNA synthetase; binding to its own mRNA may confer autoregulation; shares five highly conserved amino acids with human that when mutated cause leukoencephalopathy characterized by hypomyelination with brain stem and spinal cord involvement and leg spasticity (HBSL)","termid":"PBO:0082311"}


id: GO:1901724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["PMID:18182616","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in kidney development","synonyms":[{"name":"activation of cell proliferation involved in kidney development","type":"narrow"},{"name":"up regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"up-regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"upregulation of cell proliferation involved in kidney development","type":"exact"}],"termid":"GO:1901724"}


id: GO:1902905
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of supramolecular fiber organization.","definition_xrefs":["GOC:TermGenie","PMID:23921388","GOC:PARL","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"positively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of fibril organisation","type":"narrow"},{"name":"activation of fibril organization","type":"narrow"},{"name":"positive regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organisation","type":"related"},{"name":"up regulation of fibril organization","type":"related"},{"name":"up-regulation of fibril organisation","type":"related"},{"name":"up-regulation of fibril organization","type":"related"},{"name":"upregulation of fibril organisation","type":"related"},{"name":"upregulation of fibril organization","type":"related"}],"termid":"GO:1902905","terms_by_termid":{"GO:0031117":null}}


id: PBO:0058720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6848","termid":"PBO:0058720"}


id: PBO:0067637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 810, pseudogene","termid":"PBO:0067637"}


id: PBO:0038318
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abstract","termid":"PBO:0038318"}


id: PBO:0075553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatid maturation 1","termid":"PBO:0075553"}


id: GO:0120266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"},{"relation_name":"positively_regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome attachment to the nuclear envelope","synonyms":[{"name":"activation of chromosome attachment to the nuclear envelope","type":"narrow"},{"name":"stimulation of chromosome attachment to the nuclear envelope","type":"narrow"},{"name":"up regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"up-regulation of chromosome attachment to the nuclear envelope","type":"exact"},{"name":"upregulation of chromosome attachment to the nuclear envelope","type":"exact"}],"termid":"GO:0120266"}


id: PBO:0056125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LysM domain containing 2","termid":"PBO:0056125"}


id: GO:0042980
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cystic fibrosis transmembrane conductance regulator binding (obsolete GO:0042980)","synonyms":[{"name":"CFTR binding","type":"exact"},{"name":"cystic fibrosis transmembrane conductance regulator binding","type":"exact"}],"termid":"GO:0042980"}


id: GO:0015168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerol from one side of a membrane to the other. Glycerol is 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycerol transmembrane transporter activity","termid":"GO:0015168"}


id: PBO:0082190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldehyde reductase; involved in detoxification of lignocellulose-derived aldehydes; catalyzes the reduction of furan, aliphatic and aromatic aldehydes using either NADH or NADPH as co-factor; membrane of the quinone oxidoreductase subfamily of the medium-chain dehydrogenase/reductase family; null mutant displays sensitivity to DNA damaging agents; protein abundance increases in response to DNA replication stress","termid":"PBO:0082190"}


id: MONDO:0014813
data:
  {"annotated_genes":["SJAG_00586"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86167],"is_not":false,"summary":null,"term":"MONDO:0014813"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the HIKESHI gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00586":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616881","MEDGEN:896545","UMLS:C4225170","DOID:0060795"],"synonyms":[{"name":"HIKESHI leukodystrophy","type":"exact"},{"name":"HLD13","type":"exact"},{"name":"hikeshi leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 13","type":"exact"},{"name":"leukodystrophy caused by mutation in HIKESHI","type":"exact"},{"name":"leukodystrophy caused by mutation in hikeshi","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 13","type":"exact"},{"name":"leukodystrophy, hypomyelinating, type 13","type":"exact"}],"termid":"MONDO:0014813","terms_by_termid":{"MONDO:0014813":null},"xrefs":{"Monarch":{"xref_id":"0014813"}}}


id: GO:0071674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a mononuclear cell within or between different tissues and organs of the body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mononuclear cell migration","termid":"GO:0071674"}


id: PR:O94687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tas3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-induced transcriptional silencing complex protein tas3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.03c","synonyms":[{"name":"RITS protein tas3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tas3","type":"exact"}],"termid":"PR:O94687"}


id: GO:0023069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the xylem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via xylem (obsolete GO:0023069)","synonyms":[{"name":"signal transmission via xylem","type":"exact"}],"termid":"GO:0023069"}


id: MONDO:1040037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the IMPG1 gene.","definition_xrefs":["PMID:28644393","PMID:23993198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"IMPG1-related recessive retinopathy","synonyms":[{"name":"IMPG1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040037","xrefs":{"Monarch":{"xref_id":"1040037"}}}


id: PBO:0082587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-golgi GTPase-activating protein (GAP) for yeast Rabs; the Rab family members are Ypt1p (in vivo) and for Ypt1p, Sec4p, Ypt7p, and Ypt51p (in vitro); involved in vesicle docking and fusion; interacts with autophagosome component Atg8p","termid":"PBO:0082587"}


id: MONDO:0006237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor mass composed of myeloblasts, neutrophils and neutrophil precursors. Granulocytic sarcoma is the most common type of myeloid sarcoma. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid sarcoma","termid":"MONDO:0006861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"granulocytic sarcoma","secondary_identifiers":["UMLS:C0152276","EFO:1000286","MEDGEN:56275","NCIT:C35815"],"synonyms":[{"name":"granulocytic sarcoma","type":"exact"},{"name":"sarcoma, granulocytic, malignant","type":"exact"}],"termid":"MONDO:0006237","xrefs":{"Monarch":{"xref_id":"0006237"}}}


id: PR:O74758
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC17D11.03c gene.","definition_xrefs":["UniProtKB:O74758","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17D11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.03c","synonyms":[{"name":"Spom972h-SPBC17D11.03c","type":"exact"}],"termid":"PR:O74758"}


id: MONDO:0013529
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86300],"is_not":false,"summary":null,"term":"MONDO:0013529"}]},"cv_name":"mondo","definition":"Any catecholaminergic polymorphic ventricular tachycardia in which the cause of the disease is a mutation in the TECRL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholaminergic polymorphic ventricular tachycardia","termid":"MONDO:0017990"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"catecholaminergic polymorphic ventricular tachycardia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060677","GARD:15744","ICD10CM:I47.2","MEDGEN:462813","OMIM:614021","UMLS:C3151463"],"synonyms":[{"name":"CPVT3","type":"related"},{"name":"CVPT3","type":"exact"},{"name":"TECRL catecholaminergic polymorphic ventricular tachycardia","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia 3","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia caused by mutation in TECRL","type":"exact"},{"name":"catecholaminergic polymorphic ventricular tachycardia type 3","type":"exact"},{"name":"ventricular tachycardia, catecholaminergic polymorphic, 3","type":"related"}],"termid":"MONDO:0013529","terms_by_termid":{"MONDO:0013529":null},"xrefs":{"Monarch":{"xref_id":"0013529"}}}


id: GO:0060112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which controls the timing of the type of sexual cycle seen in female mammals.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generation of ovulation cycle rhythm","synonyms":[{"name":"generation of estrus cycle rhythm","type":"exact"},{"name":"generation of menstrual cycle rhythm","type":"related"},{"name":"generation of oestrus cycle rhythm","type":"exact"}],"termid":"GO:0060112"}


id: GO:0010037
data:
  {"annotated_genes":["SJAG_06611"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbon dioxide","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0010037","terms_by_termid":{"GO:0071244":null}}


id: PBO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE associated Golgi protein (predicted)","termid":"PBO:0003930"}


id: PBO:0062805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 5","termid":"PBO:0062805"}


id: FYPO:0007598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur at a site where silencing can normally be triggered by the ectopic tethering of a protein.","definition_xrefs":["PomBase:mah","PMID:23613586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished chromatin silencing at ectopic tethering site","synonyms":[{"name":"abolished chromatin silencing at ectopic tethering site during mitotic cell cycle","type":"related"},{"name":"abolished chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007598"}


id: GO:0005675
data:
  {"annotated_genes":["SJAG_00995","SJAG_00150","SJAG_00758","SJAG_01207","SJAG_04368","SJAG_03206","SJAG_00512","SJAG_00901","SJAG_04420","SJAG_03618","SJAG_04614"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70374,70670,74726,76756,79099,92512,109293,115130],"is_not":false,"summary":null,"term":"GO:0005675"},{"annotations":[112389,60966,76616],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A complex that is capable of kinase activity directed towards the C-terminal Domain (CTD) of the largest subunit of RNA polymerase II and is essential for initiation at RNA polymerase II promoters in vitro. It is composed of the core TFIIH complex and the TFIIK complex.","definition_xrefs":["PMID:14500720","GOC:ew","GOC:krc","PMID:22308316","PMID:22572993","PMID:7813015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0019908"},{"relation_name":"is_a","term_name":"carboxy-terminal domain protein kinase complex","termid":"GO:0032806"},{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null,"SJAG_03618":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991","GO:0005654"],"is_obsolete":false,"name":"transcription factor TFIIH holo complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CAK complex","type":"related"},{"name":"CDK-activating kinase","type":"broad"},{"name":"cyclin-dependent protein kinase activating kinase holoenzyme complex","type":"exact"},{"name":"holo TFIIH complex","type":"exact"}],"termid":"GO:0005675","terms_by_termid":{"GO:0005675":null,"GO:0070985":null}}


id: GO:0044025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2B-serine (position 14) + ATP = histone H2B-phosphoserine (position 14) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 14 of histone H2B.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H2B kinase activity","termid":"GO:0140998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0004672","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"histone H2BS14 kinase activity","secondary_identifiers":["https://github.com/geneontology/go-ontology/issues/28520"],"synonyms":[{"name":"histone kinase activity (H2B-S14 specific)","type":"exact"},{"name":"histone serine kinase activity (H2B-S14 specific)","type":"exact"},{"name":"histone-serine kinase activity (H2B-S14 specific)","type":"exact"}],"termid":"GO:0044025"}


id: GO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 3,5,7,3',4'-pentahydroxyflavone = S-adenosyl-L-homocysteine + 3-methoxy-5,7,3',4'-tetrahydroxy-flavone.","definition_xrefs":["EC:2.1.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"quercetin 3-O-methyltransferase activity","secondary_identifiers":["RHEA:17673","MetaCyc:QUERCETIN-3-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:3,5,7,3',4'-pentahydroxyflavone 3-O-methyltransferase activity","type":"related"},{"name":"flavonoid 3-methyltransferase activity","type":"related"},{"name":"flavonol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030755"}


id: GO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a follicular dendritic cell resulting from exposure to an activating factor such as a cellular or soluble ligand, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["PMID:15606789","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation involved in immune response","termid":"GO:0002263"},{"relation_name":"is_a","term_name":"follicular dendritic cell activation","termid":"GO:0002266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular dendritic cell activation involved in immune response","synonyms":[{"name":"follicular dendritic cell activation during immune response","type":"related"}],"termid":"GO:0002267"}


id: MONDO:0011044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectrodactyly of lower limbs, congenital heart defect, and micrognathia","secondary_identifiers":["UMLS:C1832441","MEDGEN:318626","MESH:C563344","OMIM:601348"],"synonyms":[{"name":"ectrodactyly of lower limbs, congenital heart defect, and micrognathia","type":"exact"}],"termid":"MONDO:0011044","xrefs":{"Monarch":{"xref_id":"0011044"}}}


id: MONDO:0013065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the NR5A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 7","secondary_identifiers":["UMLS:C2751825","MEDGEN:414115","MESH:C567838","DOID:0080864","OMIM:612964"],"synonyms":[{"name":"NR5A1 primary ovarian failure","type":"exact"},{"name":"Pof7","type":"related"},{"name":"adrenal insufficiency, Nr5A1-related","type":"related"},{"name":"adrenocortical insufficiency","type":"broad"},{"name":"premature ovarian failure 7","type":"exact"},{"name":"premature ovarian failure type 7","type":"exact"},{"name":"primary ovarian failure caused by mutation in NR5A1","type":"exact"}],"termid":"MONDO:0013065","xrefs":{"Monarch":{"xref_id":"0013065"}}}


id: GO:0018150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-histidine and peptidyl-tyrosine to form a 3-(3'-L-histidyl)-L-tyrosine protein cross-link.","definition_xrefs":["RESID:AA0250"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(3'-L-histidyl)-L-tyrosine (obsolete GO:0018150)","termid":"GO:0018150"}


id: PBO:0069992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1287, pseudogene","termid":"PBO:0069992"}


id: PBO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps16 (predicted)","termid":"PBO:0001124"}


id: GO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine + phosphate = guanine + D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"guanosine phosphorylase activity","secondary_identifiers":["MetaCyc:RXN0-5199","RHEA:13233"],"synonyms":[{"name":"guanosine:phosphate D-ribosyltransferase activity","type":"related"},{"name":"guanosine:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047975"}


id: PBO:0047331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin binding LIM protein 1","termid":"PBO:0047331"}


id: MONDO:0016328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fatty acid oxidation and ketogenesis disorder with hypertrophic cardiomyopathy (obsolete MONDO:0016328)","secondary_identifiers":["Orphanet:217591"],"termid":"MONDO:0016328","xrefs":{"Monarch":{"xref_id":"0016328"}}}


id: PR:Q9USJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nro1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of ofd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.07","synonyms":[{"name":"Spom972h-nro1","type":"exact"}],"termid":"PR:Q9USJ7"}


id: GO:0042481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation and development of a tooth or teeth.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of odontogenesis","secondary_identifiers":["GO:0042484"],"synonyms":[{"name":"regulation of odontogenesis of calcareous or chitinous tooth","type":"narrow"},{"name":"regulation of tooth development","type":"exact"}],"termid":"GO:0042481"}


id: GO:0140393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1'S)-averantin + NADP+ = norsolorinic acid + NADPH.","definition_xrefs":["RHEA:35447","PMID:8368836","PMID:10584035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketoreductase activity","termid":"GO:0045703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"norsolorinic acid ketoreductase activity","secondary_identifiers":["KEGG_REACTION:R10309","MetaCyc:RXN-9480","EC:1.1.1.349"],"termid":"GO:0140393"}


id: PBO:0031072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_conjugation_frequency","termid":"PBO:0031072"}


id: FYPO:0001103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydrogen peroxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to hydrogen peroxide","synonyms":[{"name":"resistance to H2O2","type":"exact"},{"name":"resistance to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"resistance to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"resistant to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001103"}


id: GO:0061015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA, small nuclear ribonucleic acid into the nucleus.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA import into nucleus","termid":"GO:0006404"},{"relation_name":"is_a","term_name":"snRNA transport","termid":"GO:0051030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"snRNA import into nucleus","termid":"GO:0061015"}


id: PBO:0070544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 10","termid":"PBO:0070544"}


id: GO:0062100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of programmed necrotic cell death.","definition_xrefs":["GOC:aruk","GOC:rph","PMID:27258785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of programmed cell death","termid":"GO:0043068"},{"relation_name":"is_a","term_name":"regulation of programmed necrotic cell death","termid":"GO:0062098"},{"relation_name":"positively_regulates","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of programmed necrotic cell death","termid":"GO:0062100"}


id: GO:0099184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic intermediate filament cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic intermediate filament cytoskeleton","termid":"GO:0099184"}


id: MONDO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An alteration in limb growth caused by congenital vascular malformations in childhood.","definition_xrefs":["PMID:8305978"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital vascular bone syndrome (obsolete MONDO:0016524)","secondary_identifiers":["Orphanet:235832","icd11.foundation:825559961"],"termid":"MONDO:0016524","xrefs":{"Monarch":{"xref_id":"0016524"}}}


id: GO:0004645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate.","definition_xrefs":["RHEA:41732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"1,4-alpha-oligoglucan phosphorylase activity","secondary_identifiers":["MetaCyc:RXN0-5184","EC:2.4.1.1"],"synonyms":[{"name":"1,4-alpha-D-glucan:phosphate alpha-D-glucosyltransferase activity","type":"related"},{"name":"1,4-alpha-glucan phosphorylase activity","type":"related"},{"name":"alpha-glucan phosphorylase","type":"broad"},{"name":"amylopectin phosphorylase","type":"narrow"},{"name":"amylophosphorylase activity","type":"narrow"},{"name":"glucan phosphorylase","type":"narrow"},{"name":"glucosan phosphorylase","type":"narrow"},{"name":"granulose phosphorylase","type":"narrow"},{"name":"muscle phosphorylase","type":"narrow"},{"name":"muscle phosphorylase a and b activity","type":"narrow"},{"name":"myophosphorylase","type":"narrow"},{"name":"polyphosphorylase activity","type":"related"},{"name":"potato phosphorylase","type":"narrow"},{"name":"starch phosphorylase","type":"narrow"}],"termid":"GO:0004645"}


id: PBO:0060080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 27","termid":"PBO:0060080"}


id: GO:0009546
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the plasma membrane and the desmotubule of a plasmodesma.","definition_xrefs":["PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"plasmodesmatal cytoplasmic sleeve","synonyms":[{"name":"plasmodesmatal cytoplasmic annulus","type":"exact"}],"termid":"GO:0009546"}


id: PBO:0083146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF EAF5/YEL018W","termid":"PBO:0083146"}


id: GO:0019969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-10.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-10 binding","synonyms":[{"name":"IL-10 binding","type":"exact"}],"termid":"GO:0019969"}


id: PBO:0039495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A18, pseudogene","termid":"PBO:0039495"}


id: GO:0016984
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 (2R)-3-phosphoglycerate + 2 H+ = CO2 + D-ribulose 1,5-bisphosphate + H2O.","definition_xrefs":["RHEA:23124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ribulose-bisphosphate carboxylase activity","secondary_identifiers":["MetaCyc:RIBULOSE-BISPHOSPHATE-CARBOXYLASE-RXN","EC:4.1.1.39"],"synonyms":[{"name":"D-ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"D-ribulose-1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"RuBP carboxylase activity","type":"exact"},{"name":"RuBisCO activity","type":"exact"},{"name":"carboxydismutase activity","type":"related"},{"name":"diphosphoribulose carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase activity","type":"exact"},{"name":"ribulose 1,5-diphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose bisphosphate carboxylase/oxygenase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase activity","type":"exact"},{"name":"ribulose diphosphate carboxylase/oxygenase activity","type":"exact"}],"termid":"GO:0016984"}


id: GO:0006814
data:
  {"annotated_genes":["SJAG_01541","SJAG_04028","SJAG_04616","SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[61326,67575,89657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"}]},"cv_name":"biological_process","definition":"The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"sodium ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0006834","GO:0016974"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"narrow"},{"name":"sodium channel auxiliary protein activity","type":"related"},{"name":"sodium transport","type":"exact"},{"name":"sodium/potassium transport","type":"broad"},{"name":"sodium:calcium exchange","type":"narrow"},{"name":"sodium:solute transport","type":"narrow"}],"termid":"GO:0006814","terms_by_termid":{"GO:0035725":null,"GO:0036376":null}}


id: PBO:0086237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Vps4p and has a role in vacuolar sorting; stimulates the ATPase activity of Vps4; localizes to endosomes in a Vps4-dependent manner; overexpression causes canavanine sensitivity and confers a partial class D vacuole morphology","termid":"PBO:0086237"}


id: MONDO:0000179
data:
  {"annotated_genes":["SJAG_02313","SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[87229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"}]},"cv_name":"mondo","definition":"Neu-Laxova syndrome (NLS) is a rare, multiple malformation syndrome characterized by severe intrauterine growth retardation (IUGR), severe microcephaly with a sloping forehead, severe ichthyosis (collodion baby type), and facial dysmorphism.","definition_xrefs":["Orphanet:2671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"lissencephaly type 3","termid":"MONDO:0015148"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"3-phosphoglycerate dehydrogenase deficiency","termid":"MONDO:0018491"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"Neu-Laxova syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:77817004","MESH:C536405","ICD9:759.89","OMIMPS:256520","icd11.foundation:893358230","GARD:102","UMLS:C0265218","MEDGEN:78537"],"synonyms":[{"name":"NLS","type":"related"},{"name":"Neu Laxova syndrome","type":"related"}],"termid":"MONDO:0000179","terms_by_termid":{"MONDO:0009736":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0000179"}}}


id: PBO:0077047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRAP3 pseudogene 2","termid":"PBO:0077047"}


id: PBO:0083292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps 5' end of the essential gene SPT6","termid":"PBO:0083292"}


id: GO:1903367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fear response.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:8677262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of fear response","termid":"GO:1903365"},{"relation_name":"positively_regulates","term_name":"fear response","termid":"GO:0042596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fear response","synonyms":[{"name":"activation of fear response","type":"narrow"},{"name":"activation of physiological fear response","type":"narrow"},{"name":"positive regulation of physiological fear response","type":"exact"},{"name":"up regulation of fear response","type":"exact"},{"name":"up regulation of physiological fear response","type":"exact"},{"name":"up-regulation of fear response","type":"exact"},{"name":"up-regulation of physiological fear response","type":"exact"},{"name":"upregulation of fear response","type":"exact"},{"name":"upregulation of physiological fear response","type":"exact"}],"termid":"GO:1903367"}


id: GO:0035614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a stem-loop in a small nuclear RNA (snRNA). An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["GOC:sart","PMID:20455544","PMID:16568238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA stem-loop binding","termid":"GO:0035613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"snRNA stem-loop binding","synonyms":[{"name":"small nuclear RNA stem-loop binding","type":"exact"},{"name":"snRNA hairpin binding","type":"exact"},{"name":"snRNA hairpin loop binding","type":"exact"}],"termid":"GO:0035614"}


id: SO:0000510
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA including L-part1, V-intron and V-D-exon, with the 5' UTR (SO:0000204) and 3' UTR (SO:0000205).","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","termid":"SO:0000936"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VD_gene_segment","synonyms":[{"name":"VD gene","type":"exact"},{"name":"V_D_GENE","type":"exact"}],"termid":"SO:0000510"}


id: PBO:0074041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A24 pseudogene 2","termid":"PBO:0074041"}


id: PBO:0010008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation RNA helicase Sum3","termid":"PBO:0010008"}


id: PBO:0068184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 491","termid":"PBO:0068184"}


id: GO:1900504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellulosome assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellulosome assembly","termid":"GO:1900503"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"cellulosome assembly","termid":"GO:0044575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellulosome assembly","synonyms":[{"name":"down regulation of cellulosome assembly","type":"exact"},{"name":"down-regulation of cellulosome assembly","type":"exact"},{"name":"downregulation of cellulosome assembly","type":"exact"},{"name":"inhibition of cellulosome assembly","type":"narrow"}],"termid":"GO:1900504"}


id: MONDO:0014678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the MYT1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 39","secondary_identifiers":["DOID:0070069","MEDGEN:909304","UMLS:C4225296","OMIM:616521"],"synonyms":[{"name":"MRD39","type":"exact"},{"name":"MYT1L autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant intellectual disability 39","type":"exact"},{"name":"autosomal dominant mental retardation 39","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 39","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in MYT1L","type":"exact"},{"name":"chromosome 2P25.3 Duplication syndrome","type":"related"},{"name":"chromosome 2P25.3 deletion syndrome","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 39","type":"exact"},{"name":"intellectual disability, autosomal dominant 39","type":"exact"},{"name":"intellectual disability, autosomal dominant type 39","type":"exact"},{"name":"mental retardation, autosomal dominant 39","type":"related"},{"name":"mental retardation, autosomal dominant type 39","type":"exact"}],"termid":"MONDO:0014678","xrefs":{"Monarch":{"xref_id":"0014678"}}}


id: MONDO:0100174
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013409"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing age related macular degeneration.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"age related macular degeneration, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100174","terms_by_termid":{"MONDO:0013409":null},"xrefs":{"Monarch":{"xref_id":"0100174"}}}


id: MONDO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disease with epilepsy (obsolete MONDO:0016402)","secondary_identifiers":["Orphanet:225700"],"termid":"MONDO:0016402","xrefs":{"Monarch":{"xref_id":"0016402"}}}


id: PBO:0055528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2963","termid":"PBO:0055528"}


id: PBO:0031888
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Citrate Exporter","termid":"PBO:0031888"}


id: PBO:0087635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the EGO/GSE complex; the vacuolar/endosomal membrane associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from the endosome to the plasma membrane; required for ribosomal small subunit export from nucleus; required for growth at low temperature","termid":"PBO:0087635"}


id: PBO:0057611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 944","termid":"PBO:0057611"}


id: FYPO:0004334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is increased during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to nucleus during cellular response to hydrogen peroxide","synonyms":[{"name":"increased protein localisation to nucleus during cellular response to hydrogen peroxide","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to H2O2","type":"exact"},{"name":"increased protein localization to nucleus during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleus during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0004334"}


id: PBO:0083438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YOR072W; originally identified by fungal homology and RT-PCR","termid":"PBO:0083438"}


id: PBO:0078173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-4","termid":"PBO:0078173"}


id: GO:0044245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested polysaccharides into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polysaccharide digestion","secondary_identifiers":["Reactome:R-HSA-189085"],"termid":"GO:0044245"}


id: PBO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 4B","termid":"PBO:0039576"}


id: GO:0000111
data:
  {"annotated_genes":["SJAG_01049","SJAG_01887"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72579,73056],"is_not":false,"summary":null,"term":"GO:0000111"}]},"cv_name":"cellular_component","definition":"One of several protein complexes involved in nucleotide-excision repair; possesses damaged DNA binding activity. In S. cerevisiae, it is composed of Rad4p and Rad23p.","definition_xrefs":["PMID:10915862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nucleotide-excision repair factor 2 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NEF2 complex","type":"exact"}],"termid":"GO:0000111","terms_by_termid":{"GO:0000111":null}}


id: GO:0070527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"},{"relation_name":"part_of","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"platelet aggregation","synonyms":[{"name":"blood platelet aggregation","type":"exact"},{"name":"thrombocyte aggregation","type":"related"}],"termid":"GO:0070527"}


id: PBO:0065584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha","termid":"PBO:0065584"}


id: GO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Lys-Xaa > Arg-Xaa; higher selectivity than trypsin. Converts fibrin into soluble products.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete plasmin activity (obsolete GO:0004283)","synonyms":[{"name":"actase activity","type":"related"},{"name":"fibrinase activity","type":"related"},{"name":"fibrinolysin activity","type":"related"},{"name":"plasmin activity","type":"exact"},{"name":"serum tryptase activity","type":"related"},{"name":"thrombolysin","type":"related"}],"termid":"GO:0004283"}


id: PBO:0074599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10B","termid":"PBO:0074599"}


id: GO:0007316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which RNA is transported to, or maintained in, the oocyte pole plasm. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA localization","termid":"GO:0006403"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pole plasm RNA localization","secondary_identifiers":["GO:0048116"],"synonyms":[{"name":"establishment and maintenance of pole plasm RNA localization","type":"exact"},{"name":"oocyte pole plasm RNA localization","type":"exact"},{"name":"pole plasm RNA localisation","type":"exact"}],"termid":"GO:0007316"}


id: PBO:0067689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N1","termid":"PBO:0067689"}


id: GO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + N(1),N(12)-diacetylspermine + O2 = 3-acetamidopropanal + H2O2 + N(1)-acetylspermidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N(1),N(12)-diacetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity (obsolete GO:0052899)","termid":"GO:0052899"}


id: MONDO:1012118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypoplasia of mammary gland, non-human animal","termid":"MONDO:1011677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of mammary gland, sheep","secondary_identifiers":["OMIA:000529-9940"],"termid":"MONDO:1012118","xrefs":{"Monarch":{"xref_id":"1012118"}}}


id: FYPO:0004219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H4-K20 methylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 methylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004219"}


id: MONDO:0010803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eiken syndrome is a rare familial skeletal dysplasia characterized by multiple epiphyseal dysplasia, with extremely retarded ossification. It has been described in 6 members of a unique consanguineous family.","definition_xrefs":["Orphanet:79106"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with defective bone mineralization (obsolete MONDO:0019705)","termid":"MONDO:0019705"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eiken syndrome","secondary_identifiers":["OMIM:600002","GARD:16698","MESH:C564010","SCTID:720863002","DOID:0111732","MEDGEN:325097","UMLS:C1838779","icd11.foundation:467339994"],"synonyms":[{"name":"Eiken skeletal dysplasia","type":"related"},{"name":"Eiken syndrome","type":"exact"},{"name":"bone modeling defect of hands and feet","type":"related"},{"name":"bone modelling defect of hands and feet","type":"related"}],"termid":"MONDO:0010803","xrefs":{"Monarch":{"xref_id":"0010803"}}}


id: PBO:0062416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 47 pseudogene","termid":"PBO:0062416"}


id: GO:0021726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral reticular nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral reticular nucleus development","termid":"GO:0021726"}


id: MOD:01368
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#R","PubMed:15525938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site R","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01368"}


id: PBO:0059347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12","termid":"PBO:0059347"}


id: PBO:0084616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metalloprotease subunit of 19S regulatory particle; part of 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes; protein abundance increases in response to DNA replication stress","termid":"PBO:0084616"}


id: GO:0039537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway. This is a mechanism by which the virus evades the host innate immune response.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway","termid":"GO:0052078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","synonyms":[{"name":"suppression by virus of host RIG-I-like receptor (RLR) signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-I/MDA5 signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-like helicase signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-like receptor signaling pathway","type":"related"},{"name":"suppression by virus of host RLR signaling pathway","type":"related"},{"name":"suppression by virus of host cytoplasmic pattern recognition receptor signaling pathway in response to virus","type":"exact"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway","type":"narrow"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signalling pathway","type":"exact"}],"termid":"GO:0039537"}


id: MONDO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long bone bowing is a congenital condition described by the presence of symmetric or asymmetric angular deformity and shortening of the long bones, particularly the femurs, tibiae and ulnae.","definition_xrefs":["Orphanet:2292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital deformities of limbs","termid":"MONDO:0017427"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bowing of long bones","secondary_identifiers":["MedDRA:10054064","GARD:953","MEDGEN:395251","OMIM:211355","SCTID:716098006","UMLS:C1859394","icd11.foundation:1261565213"],"synonyms":[{"name":"bowing of long bones congenital","type":"related"},{"name":"bowing of long bones, asymmetric and symmetric","type":"related"}],"termid":"MONDO:0008882","xrefs":{"Monarch":{"xref_id":"0008882"}}}


id: GO:0086007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}


id: PR:Q10156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lkh1 gene.","definition_xrefs":["UniProtKB:Q10156","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity protein kinase lkh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.11c","synonyms":[{"name":"Spom972h-lkh1","type":"exact"}],"termid":"PR:Q10156"}


id: GO:0018711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoyl acetyl-CoA + CoA = acetyl-CoA + benzoyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"benzoyl acetate-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-2006"],"termid":"GO:0018711"}


id: GO:0032959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate metabolic process","termid":"GO:0032957"},{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol trisphosphate biosynthetic process","synonyms":[{"name":"IP3 biosynthesis","type":"exact"},{"name":"IP3 biosynthetic process","type":"exact"},{"name":"inositol trisphosphate anabolism","type":"exact"},{"name":"inositol trisphosphate biosynthesis","type":"exact"},{"name":"inositol trisphosphate formation","type":"exact"},{"name":"inositol trisphosphate synthesis","type":"exact"},{"name":"myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032959"}


id: GO:0031435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitogen-activated protein kinase kinase kinase, a protein that can phosphorylate a MAP kinase kinase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase binding","synonyms":[{"name":"MAPKKK binding","type":"exact"}],"termid":"GO:0031435"}


id: GO:0060603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary ducts are generated and organized. Mammary ducts are epithelial tubes that transport milk.","definition_xrefs":["PMID:17120154","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"},{"relation_name":"part_of","term_name":"mammary gland epithelium development","termid":"GO:0061180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland duct morphogenesis","termid":"GO:0060603"}


id: PBO:0066809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 108","termid":"PBO:0066809"}


id: PBO:0116764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNTB1 antisense RNA 1","termid":"PBO:0116764"}


id: PBO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histocompatibility minor serpin domain containing","termid":"PBO:0050283"}


id: PBO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Aip1 (predicted)","termid":"PBO:0001266"}


id: GO:2000789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"positive regulation of blood vessel endothelial cell differentiation","termid":"GO:0110058"},{"relation_name":"is_a","term_name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"},{"relation_name":"positively_regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of venous endothelial cell fate commitment","termid":"GO:2000789"}


id: PBO:0045080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP5 pseudogene 1","termid":"PBO:0045080"}


id: PBO:0042533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5R2 antisense RNA 1","termid":"PBO:0042533"}


id: GO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an isopeptide bond. An isopeptide bond is an amide linkage between a carboxyl group of one amino acid and an amino group of another amino acid in which at least one of these groups is not on the a-carbon of one of the amino acids (for example, the link between an epsilon-amino group of a lysine molecule to a carboxyl group on a second amino acid is an isopeptide bond).","definition_xrefs":["GOC:mah","Wikipedia:Isopeptidase"],"gene_count":0,"genotype_count":0,"name":"obsolete isopeptidase activity (obsolete GO:0070122)","termid":"GO:0070122"}


id: PBO:0029104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_lysine_level","termid":"PBO:0029104"}


id: PR:O94247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-binding protein SMUBP-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10887:SF23","PRO:DNx","OMA:SCHPO04870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha-associated DNA helicase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.07c","secondary_identifiers":["UniProtKB:O94247"],"synonyms":[{"name":"Spom972h-IGHMBP2","type":"exact"}],"termid":"PR:O94247"}


id: GO:0009469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class II cytochrome c (obsolete GO:0009469)","synonyms":[{"name":"class II cytochrome c","type":"exact"}],"termid":"GO:0009469"}


id: MONDO:0003849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the clivus. It is characterized by a lobulated growth pattern, myxoid stroma formation, and the presence of physaliphorous cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base chordoma","termid":"MONDO:0002892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clivus chordoma","secondary_identifiers":["NCIT:C5412","SCTID:446939001","UMLS:C1333071","ICD9:170.0","MEDGEN:232372","DOID:6312"],"synonyms":[{"name":"chordoma (disease) of clivus of occipital bone","type":"exact"},{"name":"chordoma of clivus","type":"exact"},{"name":"chordoma of the clivus","type":"exact"},{"name":"clival chordoma","type":"exact"},{"name":"clivus of occipital bone chordoma (disease)","type":"exact"}],"termid":"MONDO:0003849","xrefs":{"Monarch":{"xref_id":"0003849"}}}


id: GO:0004251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete X-Pro dipeptidase activity (obsolete GO:0004251)","synonyms":[{"name":"X-Pro dipeptidase activity","type":"exact"},{"name":"Xaa-Pro dipeptidase activity","type":"exact"}],"termid":"GO:0004251"}


id: MONDO:0024171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radio-digito-facial dysplasia","synonyms":[{"name":"Van Goethem syndrome","type":"related"}],"termid":"MONDO:0024171","xrefs":{"Monarch":{"xref_id":"0024171"}}}


id: GO:0102887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = beta-sesquiphellandrene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"beta-sesquiphellandrene synthase activity","secondary_identifiers":["MetaCyc:RXN-8430","RHEA:32699"],"termid":"GO:0102887"}


id: PBO:0083424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF STP3/YLR375W","termid":"PBO:0083424"}


id: PBO:0079846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-45 myosin chaperone A","termid":"PBO:0079846"}


id: MONDO:0014165
data:
  {"annotated_genes":["SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86312],"is_not":false,"summary":null,"term":"MONDO:0014165"}]},"cv_name":"mondo","definition":"A rare congenital disorder of glycosylation characterized by neonatal hypotonia, global development delay, developmental regress and severe to profound intellectual disability, infantile onset seizures that are initially associated with febrile episodes with subsequent transition to unprovoked seizures, impaired vision with esotropia and nystagmus, progressive cerebral and cerebellar atrophy, skeletal abnormalities (including brachycephaly, scoliosis, slender long bones, delayed bone age, pectus excavatum and osteopenia), inverted nipples and dysmorphic features including high and narrow forehead, frontal bossing, short nose, depressed nasal bridge, anteverted nares, high palate and wide open mouth consistent with facial hypotonia. Other features may include cardiac abnormalities (such as patent ductus arteriosus, atrial septal defects), urogenital abnormalities (such as nephrocalcinosis, urolithiasis), and low plasma concentration of alkaline phosphatase.","definition_xrefs":["Orphanet:369837"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete slender bone dysplasia (obsolete MONDO:0019699)","termid":"MONDO:0019699"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"multiple congenital anomalies-hypotonia-seizures syndrome","termid":"MONDO:0100247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00846":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"multiple congenital anomalies-hypotonia-seizures syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C566367","GARD:17584","OMIM:603530","UMLS:C3809356","DOID:0080140","OMIM:615398","MEDGEN:815686"],"synonyms":[{"name":"LFSS","type":"exact"},{"name":"M syndrome","type":"related"},{"name":"MCAHS type 3","type":"exact"},{"name":"MCAHS3","type":"related"},{"name":"PIGT multiple congenital anomalies/dysmorphic syndrome-intellectual disability","type":"exact"},{"name":"PIGT-CDG","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGT deficiency","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 7","type":"related"},{"name":"intellectual disability-seizures-hypotonia-ophthalmologic-skeletal anomalies syndrome","type":"related"},{"name":"light fixation seizure syndrome","type":"exact"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome 3","type":"exact"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome type 3","type":"exact"},{"name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability caused by mutation in PIGT","type":"exact"}],"termid":"MONDO:0014165","terms_by_termid":{"MONDO:0014165":null},"xrefs":{"Monarch":{"xref_id":"0014165"}}}


id: PBO:0090672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-37 deaminase Tad1","termid":"PBO:0090672"}


id: PBO:0076872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 21, pseudogene","termid":"PBO:0076872"}


id: MONDO:0975835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis and nasal polyposis","secondary_identifiers":["OMIM:620984"],"termid":"MONDO:0975835","xrefs":{"Monarch":{"xref_id":"0975835"}}}


id: PBO:0089597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor","termid":"PBO:0089597"}


id: PBO:0066704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 1","termid":"PBO:0066704"}


id: GO:0098749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cerebellar neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron development","termid":"GO:0021954"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar neuron development","termid":"GO:0098749"}


id: PBO:0084990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldo-keto reductase; reduces multiple substrates including 2-methylbutyraldehyde and D,L-glyceraldehyde, expression is induced by osmotic and oxidative stress; functionally redundant with other aldo-keto reductases; protein abundance increases in response to DNA replication stress; YPR1 has a paralog, GCY1, that arose from the whole genome duplication; human homolog AKR1B1 can complement yeast null mutant","termid":"PBO:0084990"}


id: GO:0033148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of an intracellular estrogen receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033145"},{"relation_name":"is_a","term_name":"regulation of intracellular estrogen receptor signaling pathway","termid":"GO:0033146"},{"relation_name":"positively_regulates","term_name":"estrogen receptor signaling pathway","termid":"GO:0030520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intracellular estrogen receptor signaling pathway","synonyms":[{"name":"positive regulation of estrogen receptor signaling pathway","type":"broad"},{"name":"positive regulation of estrogen receptor signalling pathway","type":"broad"}],"termid":"GO:0033148"}


id: MONDO:0007854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratolytic winter erythema is a rare epidermal disease, characterized by recurrent centrifugal palmoplantar peeling and erythema presenting seasonal variation (cold weather). Skin lesions may spread to the dorsum of hands and feet and to the interdigital spaces. Lower legs, knees and thighs may also be involved. Episodes may be preceded by itch and hyperhidrosis. Skin biopsy reveals an epidermal spongiosis with clefting in the stratum corneum, followed by regrowth. Keratolytic winter erythema follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:50943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratolytic winter erythema","secondary_identifiers":["MESH:C536155","icd11.foundation:1491245207","UMLS:C0406756","ICD9:695.89","NORD:1286","OMIM:148370","MEDGEN:98359","SCTID:239064000","GARD:8275"],"synonyms":[{"name":"Erythrokeratolysis hiemalis","type":"exact"},{"name":"Erythrokeratolysis hiemalis ichthyosis","type":"related"},{"name":"KWE","type":"related"},{"name":"Oudtshoorn disease","type":"exact"},{"name":"Oudtshoorn skin","type":"related"},{"name":"Oudtshoorn skin disease","type":"related"},{"name":"keratolytic WINTER erythema","type":"related"},{"name":"keratolytic winter erythema","type":"exact"}],"termid":"MONDO:0007854","xrefs":{"Monarch":{"xref_id":"0007854"}}}


id: PBO:0053825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1089","termid":"PBO:0053825"}


id: PBO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 intronic transcript 1","termid":"PBO:0052122"}


id: MONDO:0019289
data:
  {"annotated_genes":["SJAG_04213","SJAG_03497","SJAG_04380","SJAG_01111","SJAG_02978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[86254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014169"},{"annotations":[86472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014886"},{"annotations":[87661,87662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_02978":null,"SJAG_03497":null,"SJAG_04213":null,"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hyperpigmentation of the skin","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57992","Orphanet:79375","ICD9:709.09","UMLS:C0162834","HP:0000953","SCTID:49765009"],"termid":"MONDO:0019289","terms_by_termid":{"MONDO:0007483":null,"MONDO:0014169":null,"MONDO:0014886":null,"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0019289"}}}


id: MONDO:0035605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","secondary_identifiers":["Orphanet:585877","ICD10CM:C91.0","UMLS:C2698313","MEDGEN:396322","NCIT:C80328","GARD:22341"],"termid":"MONDO:0035605","xrefs":{"Monarch":{"xref_id":"0035605"}}}


id: MONDO:0013761
data:
  {"annotated_genes":["SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86995],"is_not":false,"summary":null,"term":"MONDO:0013761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"childhood encephalopathy due to thiamine pyrophosphokinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:13571","OMIM:614458","MEDGEN:482496","Orphanet:293955","UMLS:C3280866"],"synonyms":[{"name":"THMD5","type":"related"},{"name":"childhood encephalopathy due to thiamine pyrophosphokinase deficiency","type":"exact"},{"name":"encephalopathy, episodic, due to thiamine pyrophosphokinase deficiency","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 5 (episodic encephalopathy type)","type":"related"}],"termid":"MONDO:0013761","terms_by_termid":{"MONDO:0013761":null},"xrefs":{"Monarch":{"xref_id":"0013761"}}}


id: MONDO:0010355
data:
  {"annotated_genes":["SJAG_03635","SJAG_03286","SJAG_01465"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87406,87407,87408],"is_not":false,"summary":null,"term":"MONDO:0010355"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_03286":null,"SJAG_03635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability Claes-Jensen type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1845243","Orphanet:85279","MEDGEN:335139","DOID:0060809","MESH:C564494","OMIM:300534","SCTID:719161008","GARD:16744"],"synonyms":[{"name":"MRXSCJ","type":"exact"},{"name":"MRXSJ","type":"exact"},{"name":"intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"mental retardation, X-linked, syndromic, Claes-Jensen type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, JARID1C-related","type":"related"},{"name":"syndromic X-linked intellectual disability Claes-Jensen type","type":"exact"},{"name":"syndromic X-linked intellectual disability JARID1C-related","type":"exact"},{"name":"syndromic X-linked intellectual disability due to JARID1C mutation","type":"exact"},{"name":"syndromic X-linked mental retardation JARID1C-related","type":"exact"}],"termid":"MONDO:0010355","terms_by_termid":{"MONDO:0010355":null},"xrefs":{"Monarch":{"xref_id":"0010355"}}}


id: GO:1902101
data:
  {"annotated_genes":["SJAG_02380","SJAG_04259","SJAG_03126","SJAG_04573","SJAG_02498","SJAG_03353","SJAG_03048","SJAG_01297","SJAG_02451","SJAG_02169","SJAG_00666","SJAG_00145","SJAG_04968","SJAG_01805","SJAG_00883","SJAG_03681","SJAG_02336","SJAG_01679"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99914,104210,108567,116200,107546,91062,114085,112267,114572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[94537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[95494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[102697,98025,94145,111683,100463,102426,115071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of cell cycle.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of cell cycle","termid":"GO:0044784"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of metaphase/anaphase transition of cell cycle","type":"narrow"},{"name":"up regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"up-regulation of metaphase/anaphase transition of cell cycle","type":"exact"},{"name":"upregulation of metaphase/anaphase transition of cell cycle","type":"exact"}],"termid":"GO:1902101","terms_by_termid":{"GO:0045842":null,"GO:0140499":null,"GO:1902426":null,"GO:1905191":null}}


id: GO:0003935
data:
  {"annotated_genes":["SJAG_04711","SJAG_00376"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58737,60239],"is_not":false,"summary":null,"term":"GO:0003935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 4 H2O = 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + formate + 3 H+ + 2 phosphate.","definition_xrefs":["RHEA:23704","EC:3.5.4.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"GTP cyclohydrolase II activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["KEGG_REACTION:R00425","MetaCyc:GTP-CYCLOHYDRO-II-RXN"],"synonyms":[{"name":"GTP 7,8-8,9-dihydrolase (diphosphate-forming)","type":"related"},{"name":"GTP-8-formylhydrolase activity","type":"related"},{"name":"guanosine triphosphate cyclohydrolase II","type":"related"}],"termid":"GO:0003935","terms_by_termid":{"GO:0003935":null}}


id: MONDO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glandular epithelial neoplasm that arises from the vagina and shows intestinal differentiation.","definition_xrefs":["NCIT:C40256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal adenoma","secondary_identifiers":["DOID:5402","MEDGEN:274377","UMLS:C1519913"],"synonyms":[{"name":"vagina adenoma","type":"exact"},{"name":"vaginal adenoma","type":"exact"}],"termid":"MONDO:0003434","xrefs":{"Monarch":{"xref_id":"0003434"}}}


id: GO:2000184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progesterone biosynthetic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of hormone biosynthetic process","termid":"GO:0046886"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of progesterone biosynthetic process","termid":"GO:2000182"},{"relation_name":"positively_regulates","term_name":"progesterone biosynthetic process","termid":"GO:0006701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"positive regulation of progesterone biosynthetic process","synonyms":[{"name":"positive regulation of progesterone anabolism","type":"exact"},{"name":"positive regulation of progesterone biosynthesis","type":"exact"},{"name":"positive regulation of progesterone formation","type":"exact"},{"name":"positive regulation of progesterone synthesis","type":"exact"}],"termid":"GO:2000184"}


id: PBO:0077437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 170B","termid":"PBO:0077437"}


id: PBO:0075107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 156","termid":"PBO:0075107"}


id: PBO:0066876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 176","termid":"PBO:0066876"}


id: GO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + pelargonidin 3-O-(6-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside = CoA + 4'''-demalonylsalvianin.","definition_xrefs":["EC:2.3.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.172-RXN","RHEA:21988"],"synonyms":[{"name":"Ss5MaT1","type":"related"},{"name":"malonyl-CoA:pelargonidin-3-O-(6-caffeoyl-beta-D-glucoside)-5-O-beta-D-glucoside 6'''-O-malonyltransferase activity","type":"related"}],"termid":"GO:0033810"}


id: PBO:0075944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG2 antisense RNA 1","termid":"PBO:0075944"}


id: PBO:0072684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN domain containing 1","termid":"PBO:0072684"}


id: PBO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger splicing factor Bpb1","termid":"PBO:0005185"}


id: PBO:0028360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_polynucleotide_5'-phosphatase_activity","termid":"PBO:0028360"}


id: PBO:0043924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CROCC pseudogene 3","termid":"PBO:0043924"}


id: PBO:0028083
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology","termid":"PBO:0028083"}


id: GO:0098518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphopolynucleotide + H2O = polynucleotide + phosphate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete polynucleotide phosphatase activity (obsolete GO:0098518)","termid":"GO:0098518"}


id: PBO:0060893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 2","termid":"PBO:0060893"}


id: _global:symbiotically_interacts_with
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A biotic interaction in which the two organisms live together in more or less intimate association.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"_global:participates_in_a_biotic-biotic_interaction_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbiotically_interacts_with","secondary_identifiers":["RO:0002440"],"termid":"_global:symbiotically_interacts_with"}


id: FYPO:0000204
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of mRNA from the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA localization during vegetative growth","termid":"FYPO:0000360"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"RNA transport phenotype","termid":"FYPO:0004852"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mRNA export from nucleus","synonyms":[{"name":"abnormal mRNA export from nucleus during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA export from nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0000204"}


id: PBO:0062474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily G member 2","termid":"PBO:0062474"}


id: GO:1901212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac chamber formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"is_a","term_name":"positive regulation of cardiac chamber morphogenesis","termid":"GO:1901221"},{"relation_name":"positively_regulates","term_name":"cardiac chamber formation","termid":"GO:0003207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac chamber formation","synonyms":[{"name":"activation of cardiac chamber formation","type":"narrow"},{"name":"activation of heart chamber formation","type":"exact"},{"name":"positive regulation of heart chamber formation","type":"exact"},{"name":"up regulation of cardiac chamber formation","type":"exact"},{"name":"up regulation of heart chamber formation","type":"exact"},{"name":"up-regulation of cardiac chamber formation","type":"exact"},{"name":"up-regulation of heart chamber formation","type":"exact"},{"name":"upregulation of cardiac chamber formation","type":"exact"},{"name":"upregulation of heart chamber formation","type":"exact"}],"termid":"GO:1901212"}


id: PR:O14277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01525","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.08","secondary_identifiers":["UniProtKB:O14277"],"synonyms":[{"name":"Spom972h-RPS5","type":"exact"}],"termid":"PR:O14277"}


id: PBO:0076986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 4","termid":"PBO:0076986"}


id: FYPO:0007782
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_02266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02266","name":"rad24delta","uniquename":"SJAG_02266:allele-1"},"SJAG_02576:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02576","name":"rad25delta","uniquename":"SJAG_02576:allele-1"},"SJAG_02771:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02771","name":"rad1delta","uniquename":"SJAG_02771:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119396,119400,119507,119508,119509,119510,119511,119512,119514,119515],"is_not":false,"summary":null,"term":"FYPO:0007782"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the transition from yeast-form to hyphal growth does not occur under conditions that normally induce it.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_02266":null,"SJAG_02576":null,"SJAG_02771":null},"genotype_count":8,"genotypes_by_uniquename":{"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"rad1delta":{"display_name":"rad1delta","display_uniquename":"rad1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02771:allele-1","expression":"Null"}]}]},"rad24delta":{"display_name":"rad24delta","display_uniquename":"rad24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02266:allele-1","expression":"Null"}]}]},"rad25delta":{"display_name":"rad25delta","display_uniquename":"rad25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02576:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"abolished hyphal transition","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_02266","SJAG_02576","SJAG_01205","SJAG_01680","SJAG_02771","SJAG_00429","SJAG_01605","SJAG_00364"],"single_locus_genotype_uniquenames":["crb2delta","rad1delta","rad26delta","rad9delta","rad25delta","chk1delta","rad24delta","rad3delta"],"synonyms":[{"name":"abolished transition to hyphal growth","type":"exact"},{"name":"hyphal transition abolished","type":"exact"}],"termid":"FYPO:0007782","terms_by_termid":{"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007782":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_polarity","termid":"PBO:0034568"}


id: PBO:0050080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1","termid":"PBO:0050080"}


id: GO:1904411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secretory granule organization.","definition_xrefs":["PMID:15039777","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of secretory granule organization","termid":"GO:1904409"},{"relation_name":"positively_regulates","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secretory granule organization","synonyms":[{"name":"activation of secretory granule organisation","type":"narrow"},{"name":"activation of secretory granule organization","type":"narrow"},{"name":"activation of secretory granule organization and biogenesis","type":"related"},{"name":"positive regulation of secretory granule organisation","type":"exact"},{"name":"positive regulation of secretory granule organization and biogenesis","type":"related"},{"name":"up regulation of secretory granule organisation","type":"exact"},{"name":"up regulation of secretory granule organization","type":"exact"},{"name":"up regulation of secretory granule organization and biogenesis","type":"related"},{"name":"up-regulation of secretory granule organisation","type":"exact"},{"name":"up-regulation of secretory granule organization","type":"exact"},{"name":"up-regulation of secretory granule organization and biogenesis","type":"related"},{"name":"upregulation of secretory granule organisation","type":"exact"},{"name":"upregulation of secretory granule organization","type":"exact"},{"name":"upregulation of secretory granule organization and biogenesis","type":"related"}],"termid":"GO:1904411"}


id: MONDO:1011503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi syndrome, non-human animal","termid":"MONDO:1011448"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi syndrome, dog","secondary_identifiers":["OMIA:000366-9615"],"termid":"MONDO:1011503","xrefs":{"Monarch":{"xref_id":"1011503"}}}


id: MONDO:0700126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal disorder consisting of the presence of an extra chromosome 21.","definition_xrefs":["PMID:29218069","MONDO:patterns/trisomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Down syndrome","termid":"MONDO:0008608"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 21","secondary_identifiers":["UMLS:C3537167","MEDGEN:760825"],"termid":"MONDO:0700126","xrefs":{"Monarch":{"xref_id":"0700126"}}}


id: GO:0015776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of capsular polysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Capsular polysaccharides make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"capsular polysaccharide transport","synonyms":[{"name":"capsular-polysaccharide transport","type":"exact"},{"name":"capsule polysaccharide transport","type":"exact"}],"termid":"GO:0015776"}


id: PBO:0061544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase family member 7","termid":"PBO:0061544"}


id: GO:0097066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.","definition_xrefs":["GOC:sjw","PMID:9916872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to thyroid hormone","synonyms":[{"name":"response to thyroid hormone stimulus","type":"exact"}],"termid":"GO:0097066"}


id: GO:0023038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a diffusible signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by diffusible mediator (obsolete GO:0023038)","synonyms":[{"name":"signal initiation by diffusible mediator","type":"exact"}],"termid":"GO:0023038"}


id: PBO:0074039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 24","termid":"PBO:0074039"}


id: PBO:0062354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily N member 2","termid":"PBO:0062354"}


id: PBO:0086799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR220C is not an essential gene","termid":"PBO:0086799"}


id: PBO:0005833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSN-associated deubiquitinating enzyme Ubp12","termid":"PBO:0005833"}


id: GO:0023060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is released and/or conveyed from one location to another.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission (obsolete GO:0023060)","synonyms":[{"name":"signal transmission","type":"exact"}],"termid":"GO:0023060"}


id: MONDO:0008219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pemphigus is a group of chronic autoimmune skin diseases characterized by blister formations on the outer layer of the skin and the mucous membranes. Three clinical forms have been characterized, of which pemphigus vulgaris is the most frequent (75%).","definition_xrefs":["Orphanet:704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pemphigus vulgaris","secondary_identifiers":["MedDRA:10052802","SCTID:49420001","GARD:7355","NCIT:C34910","NANDO:1200229","UMLS:C0030809","icd11.foundation:278358681","ICD10CM:L10.0","EFO:0004719","MEDGEN:10621","MESH:C536645","OMIM:169610","DOID:0060851"],"synonyms":[{"name":"familial pemphigus vulgaris","type":"exact"},{"name":"pemphigus vulgaris, familial","type":"related"}],"termid":"MONDO:0008219","xrefs":{"Monarch":{"xref_id":"0008219"}}}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: PBO:0062826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress induced growth inhibitor 1","termid":"PBO:0062826"}


id: PR:Q9P7T1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sib1 gene.","definition_xrefs":["UniProtKB:Q9P7T1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxamate-type ferrichrome siderophore peptide synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.02c","synonyms":[{"name":"Spom972h-sib1","type":"exact"}],"termid":"PR:Q9P7T1"}


id: GO:0019084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral transcription that takes place after early transcription in the viral life cycle, and which involves the transcription of genes required for replication.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"middle viral transcription","synonyms":[{"name":"(delayed) early viral mRNA transcription","type":"related"}],"termid":"GO:0019084"}


id: GO:0060274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction. Stationary phase can be in response to limited nutrients or a build-up of toxic substances in the environment.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of stationary phase","termid":"GO:0060274"}


id: GO:0097693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Eye-like subcellular structure found in dinoflagellates (a large group of single-celled eukaryotes). Consists of subcellular analogues to a cornea, lens, iris, and retina. Ocelloids are built from pre-existing organelles, including a cornea-like layer made of mitochondria and a retinal body made of anastomosing plastids.","definition_xrefs":["GOC:ar","PMID:26131935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ocelloid","termid":"GO:0097693"}


id: PBO:0057680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1269b","termid":"PBO:0057680"}


id: PBO:0088216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA-like protein","termid":"PBO:0088216"}


id: PBO:0054817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2230","termid":"PBO:0054817"}


id: MOD:00380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["PubMed:12910261","RESID:AA0375","Unimod:424#D","PubMed:14725769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-aspartyl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"},{"name":"nitrate reductase A aspartyl Mo-bisMGD cofactor","type":"exact"},{"name":"phosphoric acid 4-(2-amino-4-oxo-3,4,5,6,-tetrahydro-pteridin-6-yl)-2-hydroxy-3,4-dimercapto-but-3-en-yl ester guanylate ester","type":"exact"}],"termid":"MOD:00380"}


id: PBO:0071674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 6","termid":"PBO:0071674"}


id: PBO:0004525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-glucosidase Psu2 (predicted)","termid":"PBO:0004525"}


id: PBO:0045549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 4","termid":"PBO:0045549"}


id: GO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of cytidine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"wobble position cytosine ribose methylation","termid":"GO:0002131"}


id: PR:O94252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng9 gene.","definition_xrefs":["UniProtKB:O94252","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.02","synonyms":[{"name":"Spom972h-rng9","type":"exact"}],"termid":"PR:O94252"}


id: MONDO:0000735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculodentodigital dysplasia (obsolete MONDO:0000735)","termid":"MONDO:0000735","xrefs":{"Monarch":{"xref_id":"0000735"}}}


id: PBO:0060655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 4","termid":"PBO:0060655"}


id: MONDO:0016730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, slow growing neuroepithelial neoplasm composed of neoplastic, mature ganglion cells.","definition_xrefs":["NCIT:C6934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliocytoma","secondary_identifiers":["MESH:D005729","DOID:2426","NANDO:2200097","Orphanet:251937","SCTID:116371000119107","UMLS:C5779630","MEDGEN:1830324","ONCOTREE:GNC","ICDO:9492/0","GARD:10638"],"synonyms":[{"name":"GNC","type":"related"}],"termid":"MONDO:0016730","xrefs":{"Monarch":{"xref_id":"0016730"}}}


id: PBO:0057465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR583 host gene","termid":"PBO:0057465"}


id: PBO:0055240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2667","termid":"PBO:0055240"}


id: GO:0008342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Feeding behavior in an insect larva.","definition_xrefs":["GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete larval feeding behavior (sensu Insecta) (obsolete GO:0008342)","synonyms":[{"name":"larval feeding behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0008342"}


id: FYPO:0003047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the silent mating-type cassette than normal, such that it extends beyond the IRR boundary element.","definition_xrefs":["PMID:24013502","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRR","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRR during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRR during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRR","type":"exact"}],"termid":"FYPO:0003047"}


id: PBO:0078359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 4-2","termid":"PBO:0078359"}


id: PBO:0083397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORFs YPR169W-A and YPR170W-B","termid":"PBO:0083397"}


id: GO:0086078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A wide pore channel activity that enables a direct cytoplasmic connection from a bundle of His cell to a Purkinje myocyte. The gap junction passes electrical signals between the cells contributing to cardiac conduction.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gap junction channel activity involved in cardiac conduction electrical coupling","termid":"GO:0086075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"gap junction channel activity involved in bundle of His cell-Purkinje myocyte electrical coupling","termid":"GO:0086078"}


id: PBO:0065219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase associated protein 2","termid":"PBO:0065219"}


id: PBO:0072384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 10","termid":"PBO:0072384"}


id: MONDO:0005792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stomatitis caused by Herpesvirus hominis. It usually occurs as acute herpetic stomatitis (or gingivostomatitis), an oral manifestation of primary herpes simplex seen primarily in children and adolescents.","definition_xrefs":["MESH:D013283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex virus gingivostomatitis","secondary_identifiers":["EFO:0007307","SCTID:57920007"],"synonyms":[{"name":"Gingivostomatitides, herpetic","type":"related"},{"name":"Gingivostomatitis, herpetic","type":"related"},{"name":"Herpes simplex, oral","type":"related"},{"name":"Simplexvirus caused stomatitis","type":"exact"},{"name":"Simplexvirus stomatitis","type":"exact"},{"name":"Stomatitides, herpetic","type":"related"},{"name":"herpetic Gingivostomatitides","type":"related"},{"name":"herpetic Gingivostomatitis","type":"related"},{"name":"herpetic Stomatitides","type":"related"},{"name":"herpetic stomatitis","type":"related"},{"name":"oral Herpes simplex","type":"related"},{"name":"simplex, oral Herpes","type":"related"}],"termid":"MONDO:0005792","xrefs":{"Monarch":{"xref_id":"0005792"}}}


id: PBO:0087011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease H2 subunit; required for RNase H2 activity; role in ribonucleotide excision repair; related to human AGS2 that causes Aicardi-Goutieres syndrome","termid":"PBO:0087011"}


id: PBO:0082349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination ; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites","termid":"PBO:0082349"}


id: PBO:0043223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 2","termid":"PBO:0043223"}


id: PBO:0043709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 6","termid":"PBO:0043709"}


id: GO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-15 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-15","termid":"GO:0070672"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-15","synonyms":[{"name":"cellular response to IL-15","type":"exact"}],"termid":"GO:0071350"}


id: MONDO:0014373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the EMP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 10","secondary_identifiers":["OMIM:615861","UMLS:C4014507","MEDGEN:862944","DOID:0080386"],"synonyms":[{"name":"EMP2 nephrotic syndrome","type":"exact"},{"name":"NPHS10","type":"related"},{"name":"nephrotic syndrome caused by mutation in EMP2","type":"exact"},{"name":"nephrotic syndrome, type 10","type":"exact"}],"termid":"MONDO:0014373","xrefs":{"Monarch":{"xref_id":"0014373"}}}


id: PBO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sodium ion/proton antiporter Nhe1/Sod2","termid":"PBO:0025417"}


id: PBO:0053333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 173","termid":"PBO:0053333"}


id: PR:Q9HGP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGP9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C212.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.03","synonyms":[{"name":"Spom972h-SPAC212.03","type":"exact"}],"termid":"PR:Q9HGP9"}


id: PBO:0079694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 2","termid":"PBO:0079694"}


id: PR:P0CT54
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef102 gene.","definition_xrefs":["UniProtKB:P0CT54","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.10","synonyms":[{"name":"EF-1-alpha-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef102","type":"exact"}],"termid":"PR:P0CT54"}


id: FYPO:0002361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetylation during vegetative growth","termid":"FYPO:0000456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002361"}


id: MONDO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autism (obsolete MONDO:0008851)","termid":"MONDO:0008851","xrefs":{"Monarch":{"xref_id":"0008851"}}}


id: GO:0006950
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