# terms

id: PBO:0067740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 39","termid":"PBO:0067740"}


id: GO:1990249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of identifying lesions in DNA, such as pyrimidine-dimers, intrastrand cross-links, and bulky adducts. The wide range of substrate specificity suggests that the repair complex recognizes distortions in the DNA helix. It subsequently recruits a nucleotide-excision repair, preincision complex.","definition_xrefs":["GOC:bhm","PMID:22331906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA damage recognition complex","termid":"GO:1990249"}


id: PBO:0108705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Hba1","termid":"PBO:0108705"}


id: PBO:0033779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_attachment_of_mitotic_spindle_microtubules_to_kinetochore","termid":"PBO:0033779"}


id: MONDO:0011955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, noninsulin-dependent, 4","secondary_identifiers":["MESH:C564299","OMIM:608036","MEDGEN:334578","UMLS:C1842642"],"synonyms":[{"name":"Niddm4","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent, 4","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, type 4","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus 4","type":"related"}],"termid":"MONDO:0011955","xrefs":{"Monarch":{"xref_id":"0011955"}}}


id: GO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host synaptic transmission","termid":"GO:0044758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host synaptic transmission","synonyms":[{"name":"negative regulation by symbiont of host synaptic transmission","type":"exact"}],"termid":"GO:0044759"}


id: GO:0034059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anoxia","synonyms":[{"name":"response to anoxic stress","type":"exact"}],"termid":"GO:0034059"}


id: MONDO:0010630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imprinting gene related to retinoblastoma","secondary_identifiers":["UMLS:C1839964","MEDGEN:333451","OMIM:308290"],"synonyms":[{"name":"imprinting gene related to retinoblastoma","type":"exact"}],"termid":"MONDO:0010630","xrefs":{"Monarch":{"xref_id":"0010630"}}}


id: MOD:00489
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:117#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxArgBiotinRed","type":"related"},{"name":"Oxidized arginine biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00489"}


id: PBO:0024841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-24(28) sterol reductase Erg4","termid":"PBO:0024841"}


id: PBO:0047233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member E","termid":"PBO:0047233"}


id: PBO:0028809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_autophosphorylation_during_cellular_response_to_DNA_damage","termid":"PBO:0028809"}


id: SO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA regions delimited by different nonspurious TSS-TTS pairs.","definition_xrefs":["Bacterial_regulation_working_group:CMA","PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unit_of_gene_expression","termid":"SO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_unit","synonyms":[{"name":"transcription unit","type":"exact"}],"termid":"SO:0002301"}


id: GO:0046452
data:
  {"annotated_genes":["SJAG_00529","SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71340],"is_not":false,"summary":null,"term":"GO:0046452"},{"annotations":[68823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrofolate, the dihydroxylated derivative of folate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_01198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dihydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null},"synonyms":[{"name":"dihydrofolate metabolism","type":"exact"},{"name":"dihydrofolate reduction","type":"narrow"}],"termid":"GO:0046452","terms_by_termid":{"GO:0006761":null,"GO:0046452":null}}


id: FYECO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tebuconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tebuconazole","termid":"FYECO:0000387"}


id: MONDO:0011364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the STRC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 16","secondary_identifiers":["GARD:22597","MESH:C566339","MEDGEN:350211","OMIM:603720","UMLS:C1863561","DOID:0110471"],"synonyms":[{"name":"DFNB16","type":"narrow"},{"name":"STRC autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in STRC","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 16","type":"exact"},{"name":"deafness, autosomal recessive 16","type":"narrow"},{"name":"deafness, autosomal recessive type 16","type":"narrow"}],"termid":"MONDO:0011364","xrefs":{"Monarch":{"xref_id":"0011364"}}}


id: GO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polyadenylation of viral mRNA through a polymerase stuttering mechanism. The stop signal present at the end of each gene comprises a stretch of uridine on which the viral polymerase acquires a stuttering behavior: after each adenine inserted, the polymerase moves back one nucleotide along with the mRNA. It resumes transcription adding a new adenine, then again moves back, thereby producing a polyA tail.","definition_xrefs":["VZ:1916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation of viral mRNA by polymerase stuttering","synonyms":[{"name":"polyA stuttering","type":"exact"}],"termid":"GO:0039698"}


id: GO:1900257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of beta1-adrenergic receptor activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of beta1-adrenergic receptor activity (obsolete GO:1900257)","synonyms":[{"name":"down regulation of beta1 adrenoceptor","type":"exact"},{"name":"down regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"down-regulation of beta1 adrenoceptor","type":"exact"},{"name":"down-regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"downregulation of beta1 adrenoceptor","type":"exact"},{"name":"downregulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"inhibition of beta1 adrenoceptor","type":"exact"},{"name":"inhibition of beta1-adrenergic receptor activity","type":"narrow"},{"name":"negative regulation of beta1 adrenoceptor","type":"exact"}],"termid":"GO:1900257"}


id: MONDO:1012308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"self-mutilation syndrome, non-human animal","termid":"MONDO:1011634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self-mutilation syndrome, horse","secondary_identifiers":["OMIA:001161-9796"],"termid":"MONDO:1012308","xrefs":{"Monarch":{"xref_id":"1012308"}}}


id: PBO:0013458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (m1A) methyltransferase Gcd10 (predicted)","termid":"PBO:0013458"}


id: FYPO:0003199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell differs from normal during a cellular response to glucose starvation. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered RNA level during cellular response to glucose starvation","synonyms":[{"name":"abnormal RNA level during cellular response to glucose starvation","type":"exact"},{"name":"altered RNA level during cellular response to glucose depletion","type":"exact"},{"name":"altered RNA level during cellular response to glucose deprivation","type":"exact"},{"name":"altered RNA level during cellular response to glucose limitation","type":"related"},{"name":"altered RNA level during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"altered RNA level during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"altered RNA level during glucose starvation","type":"exact"},{"name":"altered cellular RNA level during cellular response to glucose starvation","type":"exact"},{"name":"altered transcript level during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0003199"}


id: PR:P40901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asc-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02267","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative amino-acid permease isp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.09","secondary_identifiers":["UniProtKB:P40901"],"synonyms":[{"name":"Spom972h-SLC7A10","type":"exact"}],"termid":"PR:P40901"}


id: GO:0039664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The viral-induced lysis of an organelle (endosome, lysosome, or caveosome) that is involved in the uptake of a virus into a host cell. Occurs once the virus is within the organelle, and results in transfer of the viral contents from the organelle compartment into the cytoplasm.","definition_xrefs":["UniProtKB-KW:KW-1174","GOC:jl","VZ:984","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysis of host organelle involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via endosome membrane lysis","type":"narrow"},{"name":"viral entry into host cell via lysis of host organelle membrane","type":"related"},{"name":"viral membrane-lytic protein","type":"related"},{"name":"viral penetration via lysis of host organellar membrane","type":"exact"}],"termid":"GO:0039664"}


id: PBO:0029302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delaminated_cell_wall","termid":"PBO:0029302"}


id: PBO:0004453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex subunit Nto1 (predicted)","termid":"PBO:0004453"}


id: PBO:0071148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 12","termid":"PBO:0071148"}


id: MONDO:0012632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alzheimer disease 15 (obsolete MONDO:0012632)","termid":"MONDO:0012632","xrefs":{"Monarch":{"xref_id":"0012632"}}}


id: MONDO:1011431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher disease, non-human animal","secondary_identifiers":["OMIA:000405"],"termid":"MONDO:1011431","xrefs":{"Monarch":{"xref_id":"1011431"}}}


id: MONDO:0010092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Filippi syndrome is characterized by microcephaly, cutaneous syndactyly of the fingers and toes, intellectual deficit, growth retardation and a characteristic facies (high and broad nasal bridge, thin alae nasi, micrognathia and a high frontal hairline). So far, less than 25 cases have been reported. Cryptorchidism, polydactyly, and teeth and hair anomalies may also be present. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:3255"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Filippi syndrome","secondary_identifiers":["MEDGEN:163197","MESH:C538152","DOID:0112194","OMIM:272440","NORD:1149","icd11.foundation:1989471300","SCTID:720954000","UMLS:C0795940","GARD:62"],"synonyms":[{"name":"FILIPPI syndrome","type":"related"},{"name":"FLPIS","type":"related"},{"name":"Filippi syndrome","type":"exact"},{"name":"Scott craniodigital syndrome with intellectual disability","type":"related"},{"name":"Scott craniodigital syndrome with mental retardation","type":"related"},{"name":"syndactyly type I with microcephaly and intellectual disability","type":"related"},{"name":"syndactyly type I with microcephaly and mental retardation","type":"related"},{"name":"syndactyly, type I, with microcephaly and intellectual disability","type":"related"},{"name":"syndactyly, type I, with microcephaly and mental retardation","type":"related"},{"name":"type 1 syndactyly-microcephaly-intellectual disability syndrome","type":"exact"},{"name":"unusual facial appearance, microcephaly, growth and intellectual disability and syndactyly","type":"related"},{"name":"unusual facial appearance, microcephaly, growth and mental retardation and syndactyly","type":"related"}],"termid":"MONDO:0010092","xrefs":{"Monarch":{"xref_id":"0010092"}}}


id: PBO:0067950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 252","termid":"PBO:0067950"}


id: MONDO:0003382
data:
  {"annotated_genes":["SJAG_00212","SJAG_01471","SJAG_02399","SJAG_00660","SJAG_03457","SJAG_03453","SJAG_00516","SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87583,87582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[87430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[85518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[87165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[87164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[86350,86349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[86236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[86978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"A disease involving the eyelid.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03453":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eyelid disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:H00","UMLS:C0015423","MEDGEN:41938","DOID:530","EFO:0009547","ICD9:374.9","NCIT:C26768","SCTID:60113004","ICD9:374.89","MESH:D005141"],"synonyms":[{"name":"disease of eyelid","type":"exact"},{"name":"disease or disorder of eyelid","type":"exact"},{"name":"disorder of eyelid","type":"exact"},{"name":"eyelid disease","type":"exact"},{"name":"eyelid disease or disorder","type":"exact"},{"name":"eyelid disorder","type":"exact"}],"termid":"MONDO:0003382","terms_by_termid":{"MONDO:0008097":null,"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0003382"}}}


id: GO:0035335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-tyrosine to form peptidyl-tyrosine.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tyrosine dephosphorylation","termid":"GO:0035335"}


id: MONDO:0044907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma which has spread from its original site of growth to another anatomic site.","definition_xrefs":["NCIT:C4104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"metastatic carcinoma","termid":"MONDO:0024879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic squamous cell carcinoma","secondary_identifiers":["MEDGEN:90749","UMLS:C0334246","SCTID:403906006"],"synonyms":[{"name":"Metastatic squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0044907","xrefs":{"Monarch":{"xref_id":"0044907"}}}


id: MONDO:0008252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet adenylate cyclase activity","secondary_identifiers":["OMIM:173395","UMLS:C1868264","MEDGEN:358164"],"synonyms":[{"name":"platelet adenylate cyclase activity","type":"exact"}],"termid":"MONDO:0008252","xrefs":{"Monarch":{"xref_id":"0008252"}}}


id: MONDO:0859748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphomatoid granulomatosis that is characterized by the presence of occasional large lymphoid cells or immunoblasts in a polymorphous background. Necrosis is more commonly seen as compared to grade I lymphomatoid granulomatosis. By in situ hybridization, EBV-positive cells are readily seen.","definition_xrefs":["DOID:0081309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphomatoid granulomatosis","termid":"MONDO:0019466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"grade II lymphomatoid granulomatosis","secondary_identifiers":["NCIT:C7932","MEDGEN:167833","UMLS:C0862090"],"termid":"MONDO:0859748","xrefs":{"Monarch":{"xref_id":"0859748"}}}


id: GO:2000613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"negatively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"negative regulation of TSH secretion","type":"exact"},{"name":"negative regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000613"}


id: PBO:0111938
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type","termid":"PBO:0111938"}


id: PBO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SA pseudogene 1","termid":"PBO:0044056"}


id: PBO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit A/ SAGA complex subunit","termid":"PBO:0002172"}


id: GO:0036014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the cyanelle envelope; includes the peptidoglycan layer.","definition_xrefs":["GOC:aa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"cyanelle envelope","termid":"GO:0033112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cyanelle intermembrane space","synonyms":[{"name":"cyanelle envelope lumen","type":"exact"},{"name":"cyanelle periplasm","type":"exact"}],"termid":"GO:0036014"}


id: GO:0051643
data:
  {"annotated_genes":["SJAG_04417","SJAG_02626","SJAG_03170","SJAG_00053","SJAG_01116","SJAG_01564","SJAG_01437","SJAG_04221","SJAG_03247","SJAG_04413","SJAG_01168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118459,72235,61472,111972,90749,62331,91822,60565,97787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061817"},{"annotations":[90750,104693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[107345,115505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which endoplasmic reticulum is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04221":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER localization","type":"exact"},{"name":"endoplasmic reticulum localisation","type":"exact"},{"name":"establishment and maintenance of ER localization","type":"exact"}],"termid":"GO:0051643","terms_by_termid":{"GO:0051685":null,"GO:0061817":null,"GO:1990854":null}}


id: GO:0018901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4-dichlorophenoxyacetic acid metabolic process","synonyms":[{"name":"2,4-D metabolic process","type":"exact"},{"name":"2,4-D metabolism","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid metabolism","type":"exact"}],"termid":"GO:0018901"}


id: MONDO:0005262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired cyst that is present in the central nervous system.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system cyst","secondary_identifiers":["NCIT:C4657","UMLS:C0349606","EFO:0003760","HP:0030724","MEDGEN:138106","SCTID:277333006","MESH:D020863"],"synonyms":[{"name":"CNS cyst","type":"exact"},{"name":"Rathke cleft cysts","type":"related"},{"name":"Rathke's cleft cysts","type":"related"},{"name":"Rathkes cleft cysts","type":"related"},{"name":"central nervous system cyst","type":"exact"},{"name":"central nervous system cyst (disease)","type":"exact"},{"name":"cleft cysts, Rathke's","type":"related"},{"name":"cyst of CNS","type":"exact"},{"name":"cyst of Central nervous system","type":"exact"},{"name":"cyst of the CNS","type":"exact"},{"name":"cyst of the Central nervous system","type":"exact"},{"name":"cyst, suprasellar","type":"related"},{"name":"cysts, Rathke cleft","type":"related"},{"name":"cysts, central nervous system","type":"related"},{"name":"cysts, suprasellar","type":"related"},{"name":"suprasellar cyst","type":"related"},{"name":"suprasellar cysts","type":"related"}],"termid":"MONDO:0005262","xrefs":{"Monarch":{"xref_id":"0005262"}}}


id: GO:0016671
data:
  {"annotated_genes":["SJAG_00365","SJAG_04060","SJAG_00419"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036456"},{"annotations":[77377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033743"},{"annotations":[60698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008113"},{"annotations":[80288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004604"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces disulfide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_04060":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.4.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016671","terms_by_termid":{"GO:0004604":null,"GO:0008113":null,"GO:0033743":null,"GO:0036456":null}}


id: PBO:0085161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide excision repair (NER) protein; binds damaged DNA during NER; binds DNA in an ATP-dependent manner (with Rad7p) during NER; required for NER of non-transcribed chromatin; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex","termid":"PBO:0085161"}


id: GO:1904530
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95625,105473],"is_not":false,"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament binding.","definition_xrefs":["PMID:24520051","GO_REF:0000059","GOC:TermGenie","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein binding","termid":"GO:0032091"},{"relation_name":"is_a","term_name":"regulation of actin binding","termid":"GO:1904616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of F-actin binding","type":"exact"},{"name":"down regulation of actin cross-linking activity","type":"related"},{"name":"down regulation of actin filament binding","type":"exact"},{"name":"down-regulation of F-actin binding","type":"exact"},{"name":"down-regulation of actin cross-linking activity","type":"related"},{"name":"down-regulation of actin filament binding","type":"exact"},{"name":"downregulation of F-actin binding","type":"exact"},{"name":"downregulation of actin cross-linking activity","type":"related"},{"name":"downregulation of actin filament binding","type":"exact"},{"name":"inhibition of F-actin binding","type":"narrow"},{"name":"inhibition of actin cross-linking activity","type":"related"},{"name":"inhibition of actin filament binding","type":"narrow"},{"name":"negative regulation of F-actin binding","type":"exact"},{"name":"negative regulation of actin cross-linking activity","type":"related"}],"termid":"GO:1904530","terms_by_termid":{"GO:1904530":null}}


id: MONDO:0020944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection by a variety of fungi, usually through four possible mechanisms: superficial infection producing conjunctivitis, keratitis, or lacrimal obstruction; extension of infection from neighboring structures - skin, paranasal sinuses, nasopharynx; direct introduction during surgery or accidental penetrating trauma; or via the blood or lymphatic routes in patients with underlying mycoses.","definition_xrefs":["MESH:D015821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fungal infection of eye","secondary_identifiers":["SCTID:31194008","UMLS:C0015405","ICD9:117.9","MEDGEN:41935"],"synonyms":[{"name":"EYE INFECT FUNGAL","type":"related"},{"name":"Eye Infection, Fungal","type":"related"},{"name":"Eye Infections, Fungal","type":"related"},{"name":"FUNGAL EYE INFECT","type":"related"},{"name":"Fungal Eye Infection","type":"related"},{"name":"Fungal Eye Infections","type":"related"},{"name":"Fungal Ocular Infection","type":"related"},{"name":"Fungal Ocular Infections","type":"related"},{"name":"Fungal eye infection","type":"related"},{"name":"Fungal infection of eye","type":"related"},{"name":"Infection, Fungal Eye","type":"related"},{"name":"Infection, Fungal Ocular","type":"related"},{"name":"Infection, Ocular Mycotic","type":"related"},{"name":"Infections, Fungal Eye","type":"related"},{"name":"Infections, Fungal Ocular","type":"related"},{"name":"Infections, Ocular Mycotic","type":"related"},{"name":"MYCOTIC INFECT OCULAR","type":"related"},{"name":"Mycoses, Ocular","type":"related"},{"name":"Mycosis, Ocular","type":"related"},{"name":"Mycotic Infection, Ocular","type":"related"},{"name":"Mycotic Infections, Ocular","type":"related"},{"name":"OCULAR INFECT FUNGAL","type":"related"},{"name":"Ocular Infection, Fungal","type":"related"},{"name":"Ocular Infections, Fungal","type":"related"},{"name":"Ocular Mycoses","type":"related"},{"name":"Ocular Mycosis","type":"related"},{"name":"Ocular Mycotic Infection","type":"related"},{"name":"Ocular Mycotic Infections","type":"related"},{"name":"Ocular mycosis","type":"related"},{"name":"Oculomycoses","type":"related"},{"name":"Oculomycosis","type":"related"},{"name":"fungal eye infection","type":"related"},{"name":"fungal infection of eye","type":"exact"},{"name":"ocular mycosis","type":"related"}],"termid":"MONDO:0020944","xrefs":{"Monarch":{"xref_id":"0020944"}}}


id: PBO:0071525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 28","termid":"PBO:0071525"}


id: PBO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 10, pseudogene","termid":"PBO:0070053"}


id: PBO:0000252
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mkh1-Pek1-Spm1 MAP kinase","termid":"PBO:0000252"}


id: PBO:0061497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuritin 1 like","termid":"PBO:0061497"}


id: PBO:0050603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 11-beta dehydrogenase 1 like","termid":"PBO:0050603"}


id: PBO:0038773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTRT1 pseudogene 1","termid":"PBO:0038773"}


id: PBO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of the Ras1-Byr2 signalling pathway, acting downstream of Ras1","termid":"PBO:0002027"}


id: PBO:0026976
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_mitochondrion","termid":"PBO:0026976"}


id: PBO:0046982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member F, pseudogene","termid":"PBO:0046982"}


id: PBO:0090204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Alp14","termid":"PBO:0090204"}


id: MONDO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal disorder consisting of the presence of two chromosomes of the same type in addition to the normal diploid number.","direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploidy","termid":"MONDO:0700064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy","secondary_identifiers":["MEDGEN:90710","MESH:D058670","UMLS:C0333689","NCIT:C36601"],"termid":"MONDO:0030502","xrefs":{"Monarch":{"xref_id":"0030502"}}}


id: PR:O14127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac12 gene.","definition_xrefs":["UniProtKB:O14127","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3C7.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.01c","synonyms":[{"name":"Spom972h-sac12","type":"exact"}],"termid":"PR:O14127"}


id: GO:0035855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a megakaryocyte cell over time, from its formation to the mature structure. Megakaryocyte development does not include the steps involved in committing a cell to a megakaryocyte fate. A megakaryocyte is a giant cell 50 to 100 micron in diameter, with a greatly lobulated nucleus, found in the bone marrow.","definition_xrefs":["GOC:vk","CL:0000556","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"part_of","term_name":"megakaryocyte differentiation","termid":"GO:0030219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"megakaryocyte development","synonyms":[{"name":"megakaryocyte cell development","type":"exact"}],"termid":"GO:0035855"}


id: PBO:0058610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6742","termid":"PBO:0058610"}


id: FYPO:0000660
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a specified catalytic activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal catalytic activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"termid":"FYPO:0000660","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: PBO:0076050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 4","termid":"PBO:0076050"}


id: GO:2001140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"positively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid transport","termid":"GO:2001140"}


id: FYPO:0009013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a lower than normal proportion of cells is viable when the medium contains glycerol as carbon source. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population viability","termid":"FYPO:0009007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"decreased vegetative cell population viability on glycerol carbon source","synonyms":[{"name":"decreased viability on glycerol carbon source","type":"broad"}],"termid":"FYPO:0009013"}


id: PBO:0029562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029562"}


id: MONDO:1011221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment, non-human animal","termid":"MONDO:1010321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, dog","secondary_identifiers":["OMIA:000275-9615"],"termid":"MONDO:1011221","xrefs":{"Monarch":{"xref_id":"1011221"}}}


id: PBO:0078120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-2","termid":"PBO:0078120"}


id: PBO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimeric","termid":"PBO:0001750"}


id: PBO:0033796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fidelity_of_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0033796"}


id: GO:0097502
data:
  {"annotated_genes":["SJAG_04316","SJAG_01264","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106287,101861,93378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment of a mannose residue to a substrate molecule.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylation","termid":"GO:0070085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01264":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097502","terms_by_termid":{"GO:0035269":null}}


id: FYPO:0002868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of orotidine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular orotidine level","synonyms":[{"name":"increased cellular orotidine level during mitotic cell cycle","type":"related"},{"name":"increased cellular orotidine level during vegetative growth","type":"exact"},{"name":"increased orotidine accumulation","type":"related"}],"termid":"FYPO:0002868"}


id: PBO:0029761
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_swollen_elongated_vegetative_cell","termid":"PBO:0029761"}


id: PR:Q9USI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USI0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.15","synonyms":[{"name":"Spom972h-SPCC794.15","type":"exact"}],"termid":"PR:Q9USI0"}


id: GO:2000468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of peroxidase activity (obsolete GO:2000468)","synonyms":[{"name":"regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"regulation of oxyperoxidase activity","type":"exact"},{"name":"regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000468"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: MONDO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of large cells with abundant eosinophilic granular cytoplasm. Representative examples include oncocytic adenomas of the thyroid gland, parathyroid gland, and pituitary gland.","definition_xrefs":["NCIT:C3759"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"oncocytic neoplasm","termid":"MONDO:0010795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncocytic adenoma","secondary_identifiers":["EFO:1001079","DOID:5389","UMLS:C1510502","ICDO:8290/0","MEDGEN:307150"],"synonyms":[{"name":"follicular adenoma, oxyphilic cell","type":"exact"},{"name":"oncocytic adenoma","type":"exact"},{"name":"oncocytoma","type":"exact"},{"name":"oxyphilic adenoma","type":"exact"}],"termid":"MONDO:0003424","xrefs":{"Monarch":{"xref_id":"0003424"}}}


id: FYPO:0004959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"},{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal level of substance in mitochondrion","synonyms":[{"name":"normal level of substance in mitochondria","type":"exact"},{"name":"normal level of substance in mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal level of substance in mitochondrion during vegetative growth","type":"exact"},{"name":"normal mitochondrial level of substance","type":"exact"}],"termid":"FYPO:0004959"}


id: PBO:0077716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transportin 1 pseudogene 2","termid":"PBO:0077716"}


id: MONDO:1011056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, horse","secondary_identifiers":["OMIA:000807-9796"],"termid":"MONDO:1011056","xrefs":{"Monarch":{"xref_id":"1011056"}}}


id: PBO:0042464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 1","termid":"PBO:0042464"}


id: MONDO:0008180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Failure of the soft palate to reach the posterior pharyngeal wall to close the opening between the oral and nasal cavities. Incomplete velopharyngeal closure is primarily related to surgeries (adenoidectomy; cleft palate) or an incompetent palatopharyngeal sphincter. It is characterized by hypernasal speech.","definition_xrefs":["MESH:D014681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital velopharyngeal incompetence","secondary_identifiers":["OMIM:167500","icd11.foundation:158386351","Orphanet:2291","GARD:5470","MEDGEN:52992","UMLS:C0042454"],"synonyms":[{"name":"palatopharyngeal incompetence","type":"related"},{"name":"velopharyngeal incompetence","type":"related"},{"name":"velopharyngeal insufficiency","type":"related"}],"termid":"MONDO:0008180","xrefs":{"Monarch":{"xref_id":"0008180"}}}


id: MONDO:0018423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spastic paraplegia type 71","secondary_identifiers":["Orphanet:401840","GARD:21701","MEDGEN:1680976","UMLS:C5190578"],"synonyms":[{"name":"SPG71","type":"exact"}],"termid":"MONDO:0018423","xrefs":{"Monarch":{"xref_id":"0018423"}}}


id: GO:0047951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-acylglutathione + H2O = a carboxylate + glutathione + H+.","definition_xrefs":["EC:3.1.2.7","RHEA:22708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutathione thiolesterase activity","secondary_identifiers":["KEGG_REACTION:R00547","MetaCyc:GLUTATHIONE-THIOESTERASE-RXN"],"synonyms":[{"name":"S-acylglutathione hydrolase activity","type":"related"},{"name":"citryl-glutathione thioesterhydrolase activity","type":"related"},{"name":"glutathione thioesterase activity","type":"exact"}],"termid":"GO:0047951"}


id: PBO:0059057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 1A","termid":"PBO:0059057"}


id: MONDO:0018387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare male infertility due to adrenal disorder (obsolete MONDO:0018387)","secondary_identifiers":["Orphanet:399584"],"termid":"MONDO:0018387","xrefs":{"Monarch":{"xref_id":"0018387"}}}


id: PomGeneEx:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at a lower level or produced at a slower rate under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased","synonyms":[{"name":"gene expression decreased","type":"exact"},{"name":"gene product level decreased","type":"exact"}],"termid":"PomGeneEx:0000003"}


id: GO:0047934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + NAD+ = D-glucono-1,5-lactone + NADH.","definition_xrefs":["MetaCyc:GLUCOSE-1-DEHYDROGENASE-NAD+-RXN","EC:1.1.1.118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0047936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose 1-dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:14293"],"synonyms":[{"name":"D-aldohexose dehydrogenase activity","type":"related"},{"name":"D-glucose:NAD oxidoreductase activity","type":"related"},{"name":"D-glucose:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047934"}


id: SO:1000155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variation whereby a transposition occurred between chromosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_transposition","termid":"SO:0000453"},{"relation_name":"is_a","term_name":"interchromosomal_mutation","termid":"SO:1000031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interchromosomal_transposition","synonyms":[{"name":"(Drosophila)Tp","type":"related"},{"name":"interchromosomal transposition","type":"exact"}],"termid":"SO:1000155"}


id: MONDO:0019175
data:
  {"annotated_genes":["SJAG_02648","SJAG_00993","SJAG_01181","SJAG_02342","SJAG_02923","SJAG_03453","SJAG_04745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[86680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[87610,87609,87611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[86129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"}]},"cv_name":"mondo","definition":"A congenital condition that results in swelling in the arms or legs, and can occur during adolescence or adulthood. Loss of motion and pain may also accompany the swelling. Protein-rich lymphatic fluid accumulates in tissues, engorging and enlarging vessels and often causing visible swelling, tenderness, and pain. Left untreated, the affected tissues may continue to swell, and can become hardened or fibrotic and susceptible to infection.","definition_xrefs":["NCIT:C48829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphedema","termid":"MONDO:0019297"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_02648":null,"SJAG_02923":null,"SJAG_03453":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary lymphedema","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201031","GARD:18932","icd11.foundation:794588197","Orphanet:77240","UMLS:C5576443","MEDGEN:1804666"],"synonyms":[{"name":"Troncular lymphatic malformation","type":"exact"},{"name":"primary lymphedema","type":"exact"}],"termid":"MONDO:0019175","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008104":null,"MONDO:0011257":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0033669":null},"xrefs":{"Monarch":{"xref_id":"0019175"}}}


id: MONDO:0023089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical term that refers to the presence of a red flat and well defined lesion on the oral mucosa that is not caused by trauma, vascular, or inflammatory processes. It is a precancerous condition and is seen more commonly in middle aged or older males. It is associated with tobacco and alcohol consumption. Microscopic examination reveals severe epithelial dysplasia, carcinoma in situ, or invasive squamous cell carcinoma.","definition_xrefs":["NCIT:C3025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroplakia","secondary_identifiers":["MEDGEN:41862","UMLS:C0014818"],"synonyms":[{"name":"erythroplakia","type":"exact"}],"termid":"MONDO:0023089","xrefs":{"Monarch":{"xref_id":"0023089"}}}


id: PBO:0048971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2, mitochondrial","termid":"PBO:0048971"}


id: MONDO:0016265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial stromal sarcoma (obsolete MONDO:0016265)","termid":"MONDO:0016265","xrefs":{"Monarch":{"xref_id":"0016265"}}}


id: PBO:0040568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 3","termid":"PBO:0040568"}


id: GO:0051098
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95625,105473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of binding, the selective interaction of a molecule with one or more specific sites on another molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of molecular function","termid":"GO:0065009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051098","terms_by_termid":{"GO:1904530":null}}


id: PATO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A weight which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"weight","termid":"PATO:0000128"},{"relation_name":"is_a","term_name":"decreased force","termid":"PATO:0002246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased weight","synonyms":[{"name":"light weight","type":"exact"},{"name":"low weight","type":"exact"}],"termid":"PATO:0000583"}


id: PR:Q1MTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea2 gene.","definition_xrefs":["UniProtKB:Q1MTQ1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein tea2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.20c","synonyms":[{"name":"Spom972h-tea2","type":"exact"},{"name":"Tip elongation aberrant protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kinesin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1MTQ1"}


id: MONDO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive prostate carcinoma characterized by the presence of squamous differentiation of the malignant cellular infiltrate. There is no evidence of glandular differentiation.","definition_xrefs":["NCIT:C5536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate squamous cell carcinoma","secondary_identifiers":["DOID:10287","SCTID:399590005","UMLS:C1302530","MEDGEN:226996","ONCOTREE:PRSC"],"synonyms":[{"name":"PRSC","type":"related"},{"name":"prostate gland squamous cell carcinoma","type":"exact"},{"name":"prostate squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of prostate","type":"exact"},{"name":"squamous cell carcinoma of the prostate","type":"exact"}],"termid":"MONDO:0000993","xrefs":{"Monarch":{"xref_id":"0000993"}}}


id: SO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift variant that causes the translational reading frame to be shortened relative to the reference feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_truncation","synonyms":[{"name":"ANNOVAR:frameshift deletion","type":"exact"},{"name":"Jannovar:frameshift_truncation","type":"exact"},{"name":"frameshift truncation","type":"exact"}],"termid":"SO:0001910"}


id: PATO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000904 wild abortive value (obsolete PATO:0000904)","termid":"PATO:0000904"}


id: GO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + ATP = 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ADP.","definition_xrefs":["RHEA:12793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol hexakisphosphate 5-kinase activity","secondary_identifiers":["MetaCyc:2.7.1.152-RXN","KEGG_REACTION:R09087"],"synonyms":[{"name":"ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity","type":"exact"}],"termid":"GO:0000832"}


id: PBO:0089531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster assembly protein Iba57","termid":"PBO:0089531"}


id: PBO:0045309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 beta","termid":"PBO:0045309"}


id: GO:0030178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045810"],"synonyms":[{"name":"down regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down regulation of frizzled signaling pathway","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down-regulation of frizzled signaling pathway","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"downregulation of frizzled signaling pathway","type":"exact"},{"name":"inhibition of Wnt receptor signaling pathway","type":"narrow"},{"name":"inhibition of frizzled signaling pathway","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030178"}


id: MONDO:0005853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm composed of a carcinomatous epithelial component and a sarcomatous mesenchymal component. Representative examples include malignant mixed mesodermal (Mullerian) tumor of the female reproductive system and carcinosarcoma of the salivary gland and the lung.","definition_xrefs":["NCIT:C3729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mixed neoplasm","secondary_identifiers":["MEDGEN:64618","UMLS:C0206625","ICDO:8940/3","MESH:D018198","DOID:154","EFO:1000356"],"synonyms":[{"name":"malignant mixed cancer","type":"exact"},{"name":"malignant mixed neoplasm","type":"exact"},{"name":"malignant mixed tumor","type":"exact"},{"name":"malignant mixed tumors","type":"related"},{"name":"malignant mixed tumour","type":"exact"},{"name":"malignant mixed tumours","type":"related"},{"name":"mixed cell type cancer","type":"broad"},{"name":"mixed neoplasm","type":"broad"},{"name":"mixed neoplasm, malignant","type":"exact"},{"name":"mixed tumor","type":"broad"},{"name":"mixed tumor, malignant","type":"exact"},{"name":"mixed tumor, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed tumor, malignant, NOS (morphologic abnormality)","type":"exact"},{"name":"mixed tumors, malignant","type":"related"},{"name":"mixed tumour","type":"broad"},{"name":"tumor, malignant mixed","type":"related"},{"name":"tumor, mixed, malignant","type":"exact"},{"name":"tumors, malignant mixed","type":"related"}],"termid":"MONDO:0005853","xrefs":{"Monarch":{"xref_id":"0005853"}}}


id: PBO:0005319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13b","termid":"PBO:0005319"}


id: PBO:0036224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_DNA_replication_initiation_resulting_in_complete_rereplication,_with_mitotic_cell_cycle_arrest","termid":"PBO:0036224"}


id: PBO:0054516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1916","termid":"PBO:0054516"}


id: FYPO:0005555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin loading is decreased during the mitotic cell cycle. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["GO:0061780","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000631","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased mitotic cohesin loading","synonyms":[{"name":"decreased cohesin loading during mitotic cell cycle","type":"exact"},{"name":"decreased cohesin loading during vegetative growth","type":"exact"},{"name":"decreased mitotic cohesin association with chromatin","type":"exact"},{"name":"decreased mitotic cohesin localization to chromatin","type":"exact"},{"name":"reduced mitotic cohesin loading","type":"exact"}],"termid":"FYPO:0005555"}


id: GO:1905765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GOC:nc","PMID:14690602","GO_REF:0000058","GOC:TermGenie","GOC:BHF_telomere","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere capping","termid":"GO:1904354"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance in response to DNA damage","termid":"GO:1904506"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"negatively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"down regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"down-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"downregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"downregulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"inhibition of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"inhibition of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"negative regulation of protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:1905765"}


id: PBO:0070583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 49","termid":"PBO:0070583"}


id: internal:label
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"label","termid":"internal:label"}


id: PBO:0086352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUF family mRNA-binding protein; Pumilio homology domain confers RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins; binding site composed of two UAAU tetranucleotides, separated by a 3-nt linker; PUF2 has a paralog, JSN1, that arose from the whole genome duplication","termid":"PBO:0086352"}


id: PBO:0044948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 3","termid":"PBO:0044948"}


id: PBO:0090539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase Rhp16b","termid":"PBO:0090539"}


id: PBO:0046103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 6","termid":"PBO:0046103"}


id: PBO:0002877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec74 (predicted)","termid":"PBO:0002877"}


id: PBO:0079221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTBK2 antisense RNA 1","termid":"PBO:0079221"}


id: MONDO:0958161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is associated with PAX5 P80R mutation.","definition_xrefs":["DOID:0081411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B acute lymphoblastic leukemia with PAX5 P80R mutation","secondary_identifiers":["UMLS:C5855498","MEDGEN:1846082","NCIT:C199260"],"termid":"MONDO:0958161","xrefs":{"Monarch":{"xref_id":"0958161"}}}


id: MONDO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 108","secondary_identifiers":["MEDGEN:1627841","DOID:0080263","UMLS:C4539997","GARD:22658","OMIM:617654"],"synonyms":[{"name":"DFNB108","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 108","type":"narrow"},{"name":"deafness, autosomal recessive 108","type":"narrow"}],"termid":"MONDO:0033200","xrefs":{"Monarch":{"xref_id":"0033200"}}}


id: PBO:0070078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 35, pseudogene","termid":"PBO:0070078"}


id: PBO:0031871
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP Citrate Lyase","termid":"PBO:0031871"}


id: MOD:00401
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct of a cysteine residue with the Gygi isotope-coded affinity tag d0 reagent.","definition_xrefs":["PubMed:10504701","Unimod:8#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"},{"relation_name":"is_a","term_name":"isotope tagged sufhydryl reagent modified cysteine","termid":"MOD:01820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"Gygi ICAT(TM) d0 modified cysteine","synonyms":[{"name":"Gygi ICAT(TM) d0","type":"related"},{"name":"ICAT-G","type":"related"}],"termid":"MOD:00401"}


id: FYPO:0000371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA modification does not occur. All RNA modification may be abolished, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished RNA modification","synonyms":[{"name":"RNA modification abolished","type":"exact"},{"name":"RNA modification abolished during vegetative growth","type":"exact"},{"name":"RNA modification: absent","type":"related"},{"name":"abolished RNA modification during mitotic cell cycle","type":"related"},{"name":"absent RNA modification","type":"exact"}],"termid":"FYPO:0000371"}


id: FYPO:0000972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"is_a","term_name":"increased number of Rad52 foci","termid":"FYPO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during vegetative growth","synonyms":[{"name":"increased number of Rad22 foci during vegetative growth","type":"exact"},{"name":"increased number of Rad52 foci during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000972"}


id: MONDO:1011495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, non-human animal","termid":"MONDO:1011425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, horse","secondary_identifiers":["OMIA:000327-9796"],"termid":"MONDO:1011495","xrefs":{"Monarch":{"xref_id":"1011495"}}}


id: PR:O94450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0616 protein C1687.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.04","synonyms":[{"name":"Spom972h-mcb1","type":"exact"}],"termid":"PR:O94450"}


id: GO:0042689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of crystal cell differentiation","termid":"GO:0042689"}


id: PBO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-28","termid":"PBO:0051345"}


id: GO:0019324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-lyxose, the L-enantiomer of aldopentose lyxo-pentose, the C-2 epimer of xylose.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-lyxose metabolic process","secondary_identifiers":["MetaCyc:LYXMET-PWY"],"synonyms":[{"name":"L-lyxose metabolism","type":"exact"}],"termid":"GO:0019324"}


id: FYPO:0005424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic chromosome condensation occurs to a lower extent than normal during telophase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic chromosome condensation","termid":"FYPO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000631","FYPO:0000293"],"is_obsolete":false,"name":"decreased mitotic chromosome condensation during telophase","synonyms":[{"name":"decreased chromosome condensation during mitotic telophase","type":"exact"},{"name":"decreased mitotic chromosome condensation at telophase","type":"exact"},{"name":"decreased mitotic chromosome condensation during telophase during vegetative growth","type":"exact"},{"name":"reduced mitotic chromosome condensation during telophase","type":"exact"}],"termid":"FYPO:0005424"}


id: PBO:0051970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"influenza virus NS1A binding protein","termid":"PBO:0051970"}


id: GO:0019448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine, the L-enantiomer of 2-amino-3-mercaptopropanoic acid, i.e. (2R)-2-amino-3-mercaptopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"},{"relation_name":"is_a","term_name":"cysteine catabolic process","termid":"GO:0009093"},{"relation_name":"is_a","term_name":"L-cysteine metabolic process","termid":"GO:0046439"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process","synonyms":[{"name":"L-cysteine breakdown","type":"exact"},{"name":"L-cysteine catabolism","type":"exact"},{"name":"L-cysteine degradation","type":"exact"}],"termid":"GO:0019448"}


id: GO:0098879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynapse","termid":"GO:0099186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}


id: MONDO:0007515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopia pupillae","secondary_identifiers":["icd11.foundation:70138444","SCTID:193523008","UMLS:C1271219","MEDGEN:224790","OMIM:129750","MESH:C536185","HP:0009918"],"synonyms":[{"name":"congenital eye malformation in which the pupils are displaced from their normal central position","type":"related"},{"name":"ectopia pupillae","type":"exact"},{"name":"ectopia pupillae (disease)","type":"exact"},{"name":"familial ectopic pupil","type":"related"}],"termid":"MONDO:0007515","xrefs":{"Monarch":{"xref_id":"0007515"}}}


id: MONDO:0019554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic localized lipodystrophy is a rare, acquired, localized lipodystrophy characterized by asymptomatic, well-demarcated, depressed, lipoatrophic lesions of variable size, with normal overlying skin without antecedent inflammation or a known identifiable cause (autoimmune disease, drug injection, injury, etc).","definition_xrefs":["Orphanet:90158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lipodystrophy","termid":"MONDO:0019194"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"idiopathic localized lipodystrophy","secondary_identifiers":["UMLS:C0473566","GARD:19127","MEDGEN:633314"],"termid":"MONDO:0019554","xrefs":{"Monarch":{"xref_id":"0019554"}}}


id: PBO:0029537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_and_tapered_cells_(obsolete_FYPO:0002185)","termid":"PBO:0029537"}


id: PBO:0067530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 674, pseudogene","termid":"PBO:0067530"}


id: GO:0015520
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + tetracycline(in) = H+(in) + tetracycline(out).","definition_xrefs":["TC:2.A.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetracycline transmembrane transporter activity","termid":"GO:0008493"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"tetracycline:proton antiporter activity","synonyms":[{"name":"tetracyclin:hydrogen antiporter activity","type":"exact"},{"name":"tetracyclin:proton antiporter activity","type":"exact"},{"name":"tetracycline:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015520"}


id: PBO:0067197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 261, pseudogene","termid":"PBO:0067197"}


id: PBO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains RLM1 element","termid":"PBO:0001038"}


id: PBO:0085982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085982"}


id: GO:0098995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall lipopolysaccharides to allow entry into the host cell. For example a phage entering a Gram-negative bacterium may actively break down outer membrane lipopolysaccharides.","definition_xrefs":["VZ:3940","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide","secondary_identifiers":["VZ:3939"],"synonyms":[{"name":"degradation of host cell envelope lipopolysaccharide during viral entry","type":"exact"},{"name":"degradation of host lipopolysaccharide during virus entry","type":"exact"},{"name":"disassembly by virus of outer membrane lipopolysaccharide during viral entry","type":"narrow"},{"name":"disruption by virus of host envelope lipopolysaccharide during virus entry","type":"exact"}],"termid":"GO:0098995"}


id: MONDO:0020391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary artery coming from the aorta (PACA) is a cardiac malformation characterized by anomalous origin of one branch of the pulmonary arteries from the ascending aorta and a normal origin of the other pulmonary artery from the right ventricular outflow tract, and presenting with respiratory distress, congestive heart failure and failure to thrive within the first days/months of life.","definition_xrefs":["Orphanet:99050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal origin of the pulmonary artery","termid":"MONDO:0015239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary artery coming from the aorta","secondary_identifiers":["NANDO:2200281","UMLS:C3838927","GARD:4586","MEDGEN:824773"],"synonyms":[{"name":"abnormal origin of right or left pulmonary artery from the aorta","type":"exact"},{"name":"hemitruncus arteriosus","type":"exact"}],"termid":"MONDO:0020391","xrefs":{"Monarch":{"xref_id":"0020391"}}}


id: GO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-D-glucosamine + ATP = N-acetyl-D-glucosamine 6-phosphate + ADP + H+.","definition_xrefs":["RHEA:17417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylglucosamine kinase activity","secondary_identifiers":["EC:2.7.1.59","KEGG_REACTION:R01201","MetaCyc:N-ACETYLGLUCOSAMINE-KINASE-RXN","Reactome:R-HSA-6803771"],"synonyms":[{"name":"2-acetylamino-2-deoxy-D-glucose kinase activity","type":"related"},{"name":"ATP:2-acetylamino-2-deoxy-D-glucose 6-phosphotransferase activity","type":"related"},{"name":"ATP:N-acetyl-D-glucosamine 6-phosphotransferase activity","type":"related"},{"name":"GlcNAc kinase activity","type":"related"},{"name":"acetylaminodeoxyglucokinase activity","type":"related"},{"name":"acetylglucosamine kinase (phosphorylating)","type":"related"}],"termid":"GO:0045127"}


id: PBO:0061572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 4","termid":"PBO:0061572"}


id: MONDO:0011727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anorexia nervosa, susceptibility to, 1","secondary_identifiers":["OMIM:606788","UMLS:C1847492","MEDGEN:376139"],"synonyms":[{"name":"AN","type":"related"},{"name":"ANON1","type":"exact"},{"name":"anon","type":"related"},{"name":"anorexia nervosa, susceptibility to","type":"related"},{"name":"anorexia nervosa, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011727","xrefs":{"Monarch":{"xref_id":"0011727"}}}


id: MONDO:0014981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the BCL11B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 49","secondary_identifiers":["MEDGEN:934623","OMIM:617237","DOID:0111979","UMLS:C4310656"],"synonyms":[{"name":"BCL11B primary immunodeficiency disease","type":"exact"},{"name":"IMD49","type":"exact"},{"name":"SCID, T cell-Negative, B cell-Positive, Nk cell-Positive, with intellectual disability, spasticity, and craniofacial abnormalities","type":"related"},{"name":"immunodeficiency 49","type":"exact"},{"name":"immunodeficiency 49; IMD49","type":"exact"},{"name":"immunodeficiency type 49","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in BCL11B","type":"exact"},{"name":"severe combined immunodeficiency, T cell-Negative, B cell-Positive, Nk cell-Positive, with intellectual disability, spasticity, and craniofacial abnormalities","type":"related"}],"termid":"MONDO:0014981","xrefs":{"Monarch":{"xref_id":"0014981"}}}


id: MONDO:1012157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megaesophagus that occurs in llama.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megaesophagus, non-human animal","termid":"MONDO:1011660"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaesophagus, llama","secondary_identifiers":["OMIA:000631-9844"],"termid":"MONDO:1012157","xrefs":{"Monarch":{"xref_id":"1012157"}}}


id: PBO:0066080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 8","termid":"PBO:0066080"}


id: PBO:0071431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 37","termid":"PBO:0071431"}


id: PBO:0059665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 31","termid":"PBO:0059665"}


id: GO:1902854
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94751],"is_not":false,"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nuclear migration during mitotic telophase.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear migration along microtubule","termid":"GO:1902840"},{"relation_name":"is_a","term_name":"regulation of nuclear migration during mitotic telophase","termid":"GO:1902852"},{"relation_name":"positively_regulates","term_name":"nuclear migration during mitotic telophase","termid":"GO:0090561"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nuclear migration during mitotic telophase","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of nuclear migration during mitotic telophase","type":"narrow"},{"name":"up regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"up-regulation of nuclear migration during mitotic telophase","type":"exact"},{"name":"upregulation of nuclear migration during mitotic telophase","type":"exact"}],"termid":"GO:1902854","terms_by_termid":{"GO:1902854":null}}


id: GO:0070233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"negatively_regulates","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell apoptotic process","synonyms":[{"name":"down regulation of T cell apoptosis","type":"exact"},{"name":"down-regulation of T cell apoptosis","type":"exact"},{"name":"downregulation of T cell apoptosis","type":"exact"},{"name":"inhibition of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T cell apoptosis","type":"narrow"},{"name":"negative regulation of T lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of T-cell apoptosis","type":"exact"},{"name":"negative regulation of T-lymphocyte apoptosis","type":"exact"},{"name":"negative regulation of programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070233"}


id: MONDO:0859287
data:
  {"annotated_genes":["SJAG_04229","SJAG_00128"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86087,86088],"is_not":false,"summary":null,"term":"MONDO:0859287"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_04229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, hypotonia, and absent language","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774216","MEDGEN:1823989","OMIM:620038"],"termid":"MONDO:0859287","terms_by_termid":{"MONDO:0859287":null},"xrefs":{"Monarch":{"xref_id":"0859287"}}}


id: PBO:0083897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; found in stable complex with Nic96p and two other FG-nucleoproteins (Nsp1p and Nup57p)","termid":"PBO:0083897"}


id: SO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region specifically recognised by a recombinase, which inserts or removes another region marked by a distinct cognate integration/excision site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integration_excision_site","synonyms":[{"name":"attachment site","type":"related"},{"name":"integration excision site","type":"exact"}],"termid":"SO:0000946"}


id: GO:1905813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of motor neuron axon guidance.","definition_xrefs":["PMID:18434533","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon guidance","termid":"GO:1902668"},{"relation_name":"is_a","term_name":"regulation of motor neuron axon guidance","termid":"GO:1905812"},{"relation_name":"negatively_regulates","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of motor neuron axon guidance","synonyms":[{"name":"down regulation of motoneuron axon guidance","type":"exact"},{"name":"down regulation of motor axon guidance","type":"exact"},{"name":"down regulation of motor axon pathfinding","type":"exact"},{"name":"down regulation of motor neuron axon guidance","type":"exact"},{"name":"down-regulation of motoneuron axon guidance","type":"exact"},{"name":"down-regulation of motor axon guidance","type":"exact"},{"name":"down-regulation of motor axon pathfinding","type":"exact"},{"name":"down-regulation of motor neuron axon guidance","type":"exact"},{"name":"downregulation of motoneuron axon guidance","type":"exact"},{"name":"downregulation of motor axon guidance","type":"exact"},{"name":"downregulation of motor axon pathfinding","type":"exact"},{"name":"downregulation of motor neuron axon guidance","type":"exact"},{"name":"inhibition of motoneuron axon guidance","type":"narrow"},{"name":"inhibition of motor axon guidance","type":"narrow"},{"name":"inhibition of motor axon pathfinding","type":"narrow"},{"name":"inhibition of motor neuron axon guidance","type":"narrow"},{"name":"negative regulation of motoneuron axon guidance","type":"exact"},{"name":"negative regulation of motor axon guidance","type":"exact"},{"name":"negative regulation of motor axon pathfinding","type":"exact"}],"termid":"GO:1905813"}


id: PBO:0080305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 69 pseudogene","termid":"PBO:0080305"}


id: PBO:0089351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi phosphoenolpyruvate transmembrane transporter Pet1","termid":"PBO:0089351"}


id: GO:0098507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 5' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 5' dephosphorylation","termid":"GO:0098507"}


id: PBO:0041196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD13 homolog","termid":"PBO:0041196"}


id: PBO:0071578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 7","termid":"PBO:0071578"}


id: MONDO:0020800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition in which there is degeneration of the myelin sheath that covers the nerves of the central nervous system.","definition_xrefs":["NCIT:C34526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"demyelinating disease of central nervous system","secondary_identifiers":["MEDGEN:3719","ICD9:341.9","ICD10CM:G35-G37","SCTID:6118003","UMLS:C0011302","ICD9:341.8"],"synonyms":[{"name":"demyelinating CNS disease","type":"exact"},{"name":"demyelinating disease central nervous system (CNS)","type":"exact"},{"name":"demyelinating disease of central nervous system","type":"exact"},{"name":"demyelinating disorder of central nervous system","type":"exact"},{"name":"demyelinating disorders of the central nervous system","type":"exact"}],"termid":"MONDO:0020800","xrefs":{"Monarch":{"xref_id":"0020800"}}}


id: PBO:0088199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-knuckle transcription factor, repressor and activator; regulates genes involved in branched chain amino acid biosynthesis and ammonia assimilation; acts as a repressor in leucine-replete conditions and as an activator in the presence of alpha-isopropylmalate, an intermediate in leucine biosynthesis that accumulates during leucine starvation","termid":"PBO:0088199"}


id: PBO:0027921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_growth_on_papuamide_B","termid":"PBO:0027921"}


id: PBO:0059828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 2","termid":"PBO:0059828"}


id: GO:0047441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-5-dehydro-2-deoxy-D-gluconate = 3-oxopropanoate + glycerone phosphate.","definition_xrefs":["EC:4.1.2.29","RHEA:13177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"5-dehydro-2-deoxyphosphogluconate aldolase activity","secondary_identifiers":["KEGG_REACTION:R05378","MetaCyc:4.1.2.29-RXN"],"synonyms":[{"name":"5-dehydro-2-deoxy-D-gluconate-6-phosphate malonate-semialdehyde-lyase (pyruvate-forming)","type":"related"},{"name":"5-dehydro-2-deoxy-D-gluconate-6-phosphate malonate-semialdehyde-lyase activity","type":"related"},{"name":"phospho-5-dehydro-2-deoxygluconate aldolase activity","type":"related"},{"name":"phospho-5-keto-2-deoxygluconate aldolase activity","type":"related"}],"termid":"GO:0047441"}


id: PBO:0017530
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of Sporulation Abnormal mutant","termid":"PBO:0017530"}


id: PBO:0045719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 4","termid":"PBO:0045719"}


id: PBO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_SAGA_complex_assembly","termid":"PBO:0030401"}


id: GO:0035442
data:
  {"annotated_genes":["SJAG_05182","SJAG_02139","SJAG_01983"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118643,118644],"is_not":false,"summary":null,"term":"GO:0035442"},{"annotations":[72173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"}]},"cv_name":"biological_process","definition":"The directed movement of a dipeptide across a membrane by means of some agent such as a transporter or pore. A dipeptide is a combination of two amino acids linked together by a peptide (-CO-NH-) bond.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transport","termid":"GO:0035672"},{"relation_name":"is_a","term_name":"dipeptide transport","termid":"GO:0042938"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01983":null,"SJAG_02139":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"dipeptide transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dipeptide membrane transport","type":"exact"}],"termid":"GO:0035442","terms_by_termid":{"GO:0035442":null,"GO:0140206":null}}


id: PR:Q9UTK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear pore complex protein Nup98-Nup96 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01336","PRO:DNx","PANTHER:PTHR23198:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup189 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.05","secondary_identifiers":["UniProtKB:Q9UTK4"],"synonyms":[{"name":"Spom972h-NUP98","type":"exact"},{"name":"nuclear pore protein nup189 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK4"}


id: MONDO:0017048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudomyxoma peritonei is characterized by disseminated intra-peritoneal mucinous tumors and mucinous ascites in the abdomen and pelvis.","definition_xrefs":["Orphanet:26790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal carcinoma","termid":"MONDO:0002113"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma of the appendix","termid":"MONDO:0018330"},{"relation_name":"is_a","term_name":"peritoneal carcinomatosis","termid":"MONDO:0700336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pseudomyxoma peritonei","secondary_identifiers":["DOID:3559","MESH:D011553","NORD:1628","SCTID:307601000","ICDO:8480/6","UMLS:C0033822","MedDRA:10037138","GARD:7488","MEDGEN:18726","NCIT:C3345"],"synonyms":[{"name":"Adenomucinosis","type":"exact"},{"name":"Myxoma peritonei","type":"exact"},{"name":"PMP","type":"exact"},{"name":"gelatinous ascites","type":"exact"},{"name":"mucinous ascites","type":"exact"},{"name":"peritoneal cavity pseudomyxoma peritonei","type":"exact"},{"name":"pseudomyxoma peritonei","type":"exact"},{"name":"pseudomyxoma peritonei (morphologic abnormality)","type":"exact"},{"name":"syndrome of pseudomyxoma peritonei","type":"related"},{"name":"well differentiated peritoneal mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0017048","xrefs":{"Monarch":{"xref_id":"0017048"}}}


id: GO:0005704
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stretch of densely packed chromatin along the polytene chromosome, visible as a morphologically distinct band.","definition_xrefs":["PMID:11361342","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome band","termid":"GO:0005704"}


id: PBO:0072184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17","termid":"PBO:0072184"}


id: MONDO:0044212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of idiopathic urticaria.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic urticaria","termid":"MONDO:0044211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"chronic idiopathic urticaria","secondary_identifiers":["MEDGEN:662267","SCTID:302162004","DOID:0080749","UMLS:C0578870"],"synonyms":[{"name":"chronic idiopathic urticaria","type":"exact"},{"name":"chronic spontaneous urticaria","type":"exact"},{"name":"idiopathic urticaria, chronic","type":"exact"}],"termid":"MONDO:0044212","xrefs":{"Monarch":{"xref_id":"0044212"}}}


id: PBO:0086700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; located adjacent to ARS503 and the telomere on the left arm of chromosome V; regulated by inositol/choline","termid":"PBO:0086700"}


id: PBO:0049510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 17","termid":"PBO:0049510"}


id: GO:0032156
data:
  {"annotated_genes":["SJAG_03843","SJAG_02645","SJAG_00118","SJAG_03688","SJAG_04703","SJAG_04566","SJAG_04470","SJAG_01658","SJAG_03703","SJAG_04375","SJAG_00663","SJAG_03374","SJAG_01277","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106329,100432,116266,94835],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032175"},{"annotations":[102084,100433,113079,118932,108266,118168,101276,98144,98220,104233],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0036391"},{"annotations":[116267,106330,94836,100434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032152"},{"annotations":[101279,104236,98223,100437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032151"},{"annotations":[106333,116269,100439,94839],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0032169"},{"annotations":[75799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005940"},{"annotations":[102085,101281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032176"}]},"cv_name":"cellular_component","definition":"The part of the cytoskeleton (the internal framework of a cell) composed of septins and associated proteins. Includes septin cytoskeleton-associated complexes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00663":null,"SJAG_01277":null,"SJAG_01658":null,"SJAG_01769":null,"SJAG_02645":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_03843":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04566":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032156","terms_by_termid":{"GO:0005940":null,"GO:0032151":null,"GO:0032152":null,"GO:0032169":null,"GO:0032175":null,"GO:0032176":null,"GO:0036391":null}}


id: PATO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001089 elasticity value (obsolete PATO:0001089)","termid":"PATO:0001089"}


id: PBO:0075146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 2","termid":"PBO:0075146"}


id: GO:0048385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"regulation of RAR signaling pathway","type":"exact"},{"name":"regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048385"}


id: MONDO:0005234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polymyositis (obsolete MONDO:0005234)","termid":"MONDO:0005234","xrefs":{"Monarch":{"xref_id":"0005234"}}}


id: GO:0043584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nose over time, from its formation to the mature structure. The nose is the specialized structure of the face that serves as the organ of the sense of smell and as part of the respiratory system. Includes the nasi externus (external nose) and cavitas nasi (nasal cavity).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nose development","synonyms":[{"name":"nasus development","type":"exact"}],"termid":"GO:0043584"}


id: GO:0140768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An enzyme-substrate adaptor that bings together a protein ADP-ribosyl transferase and its substrate.","definition_xrefs":["PMID:32028527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-substrate adaptor activity","termid":"GO:0140767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"protein ADP-ribosyltransferase-substrate adaptor activity","termid":"GO:0140768"}


id: PBO:0027462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-prone_translesion_synthesis","termid":"PBO:0027462"}


id: GO:0000381
data:
  {"annotated_genes":["SJAG_04782"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65213],"is_not":false,"summary":null,"term":"GO:0000381"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alternative splicing of nuclear mRNAs.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"regulates","term_name":"alternative mRNA splicing, via spliceosome","termid":"GO:0000380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of alternative mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"regulation of alternative nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"splice site selection","type":"broad"}],"termid":"GO:0000381","terms_by_termid":{"GO:0000381":null}}


id: GO:0018669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzoate + H+ + NADH + O2 = 2,5-dihydroxybenzoate + H2O + NAD+.","definition_xrefs":["RHEA:22692","EC:1.14.13.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybenzoate 6-monooxygenase activity","secondary_identifiers":["MetaCyc:3-HYDROXYBENZOATE-6-MONOOXYGENASE-RXN","KEGG_REACTION:R02589","UM-BBD_reactionID:r0402"],"synonyms":[{"name":"3-hydroxybenzoate 6-hydroxylase activity","type":"exact"},{"name":"3-hydroxybenzoate,NADH:oxygen oxidoreductase (6-hydroxylating)","type":"related"},{"name":"3-hydroxybenzoic acid-6-hydroxylase activity","type":"related"},{"name":"m-hydroxybenzoate 6-hydroxylase activity","type":"related"}],"termid":"GO:0018669"}


id: GO:0010854
data:
  {"annotated_genes":["SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010856"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of adenylate cyclase.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"},{"relation_name":"regulates","term_name":"adenylate cyclase activity","termid":"GO:0004016"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016829"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0009975","GO:0016829","GO:0030234","GO:0098772","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"adenylate cyclase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010854","terms_by_termid":{"GO:0010856":null}}


id: GO:0046041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ITP, inosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ITP metabolic process","synonyms":[{"name":"ITP metabolism","type":"exact"}],"termid":"GO:0046041"}


id: GO:0004556
data:
  {"annotated_genes":["SJAG_04238","SJAG_00096","SJAG_04789","SJAG_02435","SJAG_00485","SJAG_01029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59719,60252,61393,63899,66899,67708],"is_not":false,"summary":null,"term":"GO:0004556"}]},"cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more alpha-(1->4)-linked D-glucose units.","definition_xrefs":["PMID:12527308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylase activity","termid":"GO:0016160"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00485":null,"SJAG_01029":null,"SJAG_02435":null,"SJAG_04238":null,"SJAG_04789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"alpha-amylase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null},"secondary_identifiers":["EC:3.2.1.1","Reactome:R-HSA-191114","MetaCyc:ALPHA-AMYL-RXN","Reactome:R-HSA-188979","GO:0103025"],"synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase activity","type":"related"},{"name":"alpha amylase activity","type":"related"},{"name":"alpha-amylase activity (releasing maltohexaose)","type":"narrow"},{"name":"endoamylase activity","type":"related"},{"name":"glycogenase activity","type":"broad"},{"name":"taka-amylase A","type":"related"}],"termid":"GO:0004556","terms_by_termid":{"GO:0004556":null}}


id: PBO:0055511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2945","termid":"PBO:0055511"}


id: PBO:0080715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WRN RecQ like helicase","termid":"PBO:0080715"}


id: MONDO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bronchial disease that is characterized by chronic inflammation and narrowing of the airways, which is caused by a combination of environmental and genetic factors resulting in recurring periods of wheezing (a whistling sound while breathing), chest tightness, shortness of breath, mucus production and coughing. The symptoms appear due to a variety of triggers such as allergens, irritants, respiratory infections, weather changes, exercise, stress, reflux disease, medications, foods and emotional anxiety.","definition_xrefs":["EFO:0000270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial disorder","termid":"MONDO:0001358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma","secondary_identifiers":["ICD9:493.81","ICD10CM:J45","HP:0002099","MEDGEN:2109","SCTID:31387002","UMLS:C0004096","icd11.foundation:1656445230","DOID:2841","ICD9:493","ICD9:493.9","MESH:D001249","NCIT:C28397"],"synonyms":[{"name":"bronchial hyperreactivity","type":"exact"},{"name":"chronic obstructive asthma","type":"narrow"},{"name":"chronic obstructive asthma with acute exacerbation","type":"narrow"},{"name":"chronic obstructive asthma with status asthmaticus","type":"narrow"},{"name":"exercise induced asthma","type":"narrow"},{"name":"exercise-induced asthma","type":"narrow"}],"termid":"MONDO:0004979","xrefs":{"Monarch":{"xref_id":"0004979"}}}


id: FYPO:0003827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the ribosomal small subunit protein S6 is decreased.","definition_xrefs":["PMID:24463365","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"decreased ribosomal S6 protein phosphorylation during vegetative growth","synonyms":[{"name":"decreased ribosomal S6 protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased ribosome S6 phosphorylation during vegetative growth","type":"exact"},{"name":"reduced ribosomal S6 protein phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003827"}


id: PBO:0066111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 3","termid":"PBO:0066111"}


id: MONDO:1012736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any skeletal dysplasia that occurs in dogs due to a mutation in the COL11A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, COL11A2-related, dog","secondary_identifiers":["OMIA:001772-9615"],"synonyms":[{"name":"SD2","type":"exact"},{"name":"skeletal dysplasia 2, COL11A2-related, dog","type":"exact"},{"name":"skeletal dysplasia 2, dog","type":"related"}],"termid":"MONDO:1012736","xrefs":{"Monarch":{"xref_id":"1012736"}}}


id: PBO:0110479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic lncRNA metabolic regulator 1","termid":"PBO:0110479"}


id: PBO:0050661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 1A","termid":"PBO:0050661"}


id: PBO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 5","termid":"PBO:0071142"}


id: PBO:0070647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 18","termid":"PBO:0070647"}


id: GO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a neutral pH (pH close to 7) stimulus.","definition_xrefs":["PMID:6374461","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}


id: MONDO:0014639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A temporal lobe epilepsy characterized by autosomal dominant inheritance of focal seizures with prominent auditory symptoms and that has material basis in heterozygous mutation in the RELN gene on chromosome 7q22.","definition_xrefs":["PMID:26046367","DOID:0060751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal lobe epilepsy","termid":"MONDO:0005115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial temporal lobe epilepsy 7","secondary_identifiers":["UMLS:C4225327","MEDGEN:907609","GARD:16112","OMIM:616436"],"synonyms":[{"name":"ETL7","type":"exact"},{"name":"epilepsy, familial temporal lobe, 7","type":"related"},{"name":"epilepsy, familial temporal lobe, type 7","type":"exact"},{"name":"familial temporal lobe epilepsy type 7","type":"exact"}],"termid":"MONDO:0014639","xrefs":{"Monarch":{"xref_id":"0014639"}}}


id: PBO:0079856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-93 homolog B5 (pseudogene)","termid":"PBO:0079856"}


id: GO:0006531
data:
  {"annotated_genes":["SJAG_03306","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[71275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aspartate, the anion derived from aspartic acid, 2-aminobutanedioic acid.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_03306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"aspartate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"aspartate metabolism","type":"exact"}],"termid":"GO:0006531","terms_by_termid":{"GO:0006532":null,"GO:0006533":null}}


id: PBO:0087738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; this complex is involved in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance","termid":"PBO:0087738"}


id: GO:0051858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process, either constitutive or induced, by which an organism evades, minimizes, or suppresses the effects of its symbiont organism's defense(s). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete avoidance of symbiont defenses (obsolete GO:0051858)","termid":"GO:0051858"}


id: PBO:0045608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 19 (pseudogene)","termid":"PBO:0045608"}


id: MONDO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cancer or tumors of the ureter which may cause obstruction leading to hydroureter, hydronephrosis, and pyelonephritis. hematuria is a common symptom.","definition_xrefs":["MESH:D014516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"ureter neoplasm","termid":"MONDO:0021111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureter benign neoplasm","secondary_identifiers":["SCTID:92464009","NCIT:C3617","UMLS:C0154016","DOID:11885","ICD9:223.2","MEDGEN:102303"],"synonyms":[{"name":"benign neoplasm of the ureter","type":"exact"},{"name":"benign neoplasm of ureter","type":"exact"},{"name":"benign tumor of the ureter","type":"exact"},{"name":"benign tumor of ureter","type":"exact"},{"name":"benign tumour of the ureter","type":"exact"},{"name":"benign tumour of ureter","type":"exact"},{"name":"benign ureter neoplasm","type":"exact"},{"name":"benign ureter tumor","type":"exact"},{"name":"benign ureter tumour","type":"exact"},{"name":"benign ureteral neoplasm","type":"exact"},{"name":"benign ureteral tumor","type":"exact"},{"name":"benign ureteral tumour","type":"exact"},{"name":"benign ureteric neoplasm","type":"exact"},{"name":"ureter benign neoplasm","type":"exact"},{"name":"ureteral benign neoplasm","type":"related"},{"name":"ureteral tumor","type":"broad"},{"name":"ureteral tumour","type":"broad"}],"termid":"MONDO:0001398","xrefs":{"Monarch":{"xref_id":"0001398"}}}


id: GO:0003864
data:
  {"annotated_genes":["SJAG_05200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77853],"is_not":false,"summary":null,"term":"GO:0003864"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + 3-methyl-2-oxobutanoate = tetrahydrofolate + 2-dehydropantoate.","definition_xrefs":["EC:2.1.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN","RHEA:11824"],"synonyms":[{"name":"5,10-methylene tetrahydrofolate:alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:3-methyl-2-oxobutanoate hydroxymethyltransferase activity","type":"related"},{"name":"alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"dehydropantoate hydroxymethyltransferase activity","type":"related"},{"name":"ketopantoate hydroxymethyltransferase activity","type":"related"},{"name":"oxopantoate hydroxymethyltransferase activity","type":"related"}],"termid":"GO:0003864","terms_by_termid":{"GO:0003864":null}}


id: PBO:0060934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 3","termid":"PBO:0060934"}


id: PBO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.9","termid":"PBO:0001611"}


id: PBO:0081828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 761","termid":"PBO:0081828"}


id: PBO:0057958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-2","termid":"PBO:0057958"}


id: _global:has_output_o_product_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the has_output relation with the gene_product_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output_o_product_of","secondary_identifiers":["GOREL:0001029"],"termid":"_global:has_output_o_product_of"}


id: GO:0052033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (obsolete GO:0052033)","synonyms":[{"name":"MAMP dependent activation of host innate immunity","type":"exact"},{"name":"MAMP dependent induction of host innate immunity","type":"exact"},{"name":"PAMP dependent activation of host innate immunity","type":"exact"},{"name":"PAMP dependent induction of host innate immunity","type":"exact"},{"name":"PTI","type":"related"},{"name":"general elicitor-dependent activation of host innate immunity","type":"exact"},{"name":"general elicitor-dependent induction of host innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent activation by organism of host innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity","type":"exact"},{"name":"pattern-triggered immunity","type":"related"}],"termid":"GO:0052033"}


id: PBO:0088500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-amino-6-(5-phosphoribosylamino) uracil reductase Rib7","termid":"PBO:0088500"}


id: GO:0019413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"acetate biosynthetic process","synonyms":[{"name":"acetate anabolism","type":"exact"},{"name":"acetate biosynthesis","type":"exact"},{"name":"acetate formation","type":"exact"},{"name":"acetate synthesis","type":"exact"}],"termid":"GO:0019413"}


id: GO:0016807
data:
  {"annotated_genes":["SJAG_01481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75031],"is_not":false,"summary":null,"term":"GO:0016807"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single C-terminal amino acid residue from a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"},{"relation_name":"is_a","term_name":"cysteine-type exopeptidase activity","termid":"GO:0070004"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"cysteine-type carboxypeptidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.4.18.-"],"termid":"GO:0016807","terms_by_termid":{"GO:0016807":null}}


id: MOD:01466
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:302#K","PubMed:15939799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menadione quinone derivative","termid":"MOD:00621"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"menadione quinone derivative - site C","synonyms":[{"name":"Menadione","type":"related"},{"name":"Menadione quinone derivative","type":"related"}],"termid":"MOD:01466"}


id: GO:0151001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense cluster of elongated, thick microvilli on the apical surface of tuft cells in epithelial tissues, such as the intestine and respiratory tract. The apical tuft extends further into the lumen than typical microvilli, featuring larger, more compact projections with unique actin cores that penetrate deep into the cytoplasm, often reaching the perinuclear region. This distinctive structure, rich in microfilaments and microtubules, supports the chemosensory functions of the cell.","definition_xrefs":["PMID:35237268","PMID:15817800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cluster of actin-based cell projections","termid":"GO:0098862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tuft","termid":"GO:0151001"}


id: GO:1904520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myofibroblast cell apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26119034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"myofibroblast cell apoptotic process","termid":"GO:1904516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibroblast cell apoptotic process","synonyms":[{"name":"regulation of MFB apoptosis","type":"narrow"},{"name":"regulation of MFB apoptotic process","type":"exact"},{"name":"regulation of myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904520"}


id: PBO:0057046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135a-1","termid":"PBO:0057046"}


id: MONDO:0035136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"melanotic neurilemmoma","termid":"MONDO:0002558"},{"relation_name":"is_a","term_name":"peripheral nervous system cancer","termid":"MONDO:0021089"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"isolated melanotic schwannoma","secondary_identifiers":["Orphanet:590539","GARD:22368"],"termid":"MONDO:0035136","xrefs":{"Monarch":{"xref_id":"0035136"}}}


id: PBO:0046531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 44","termid":"PBO:0046531"}


id: GO:1902581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular localization which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular localization (obsolete GO:1902581)","synonyms":[{"name":"multi organism cellular localization","type":"exact"}],"termid":"GO:1902581"}


id: GO:2000619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H4-K16 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H4-K16 acetylation (obsolete GO:2000619)","synonyms":[{"name":"negative regulation of histone H4 acetylation at K16","type":"exact"}],"termid":"GO:2000619"}


id: PBO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Fep1","termid":"PBO:0003818"}


id: PBO:0000924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup40","termid":"PBO:0000924"}


id: GO:1904105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in gastrulation.","definition_xrefs":["PMID:24892953","GOC:dph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in gastrulation","synonyms":[{"name":"activation of convergent extension involved in gastrulation","type":"narrow"},{"name":"up regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"up-regulation of convergent extension involved in gastrulation","type":"exact"},{"name":"upregulation of convergent extension involved in gastrulation","type":"exact"}],"termid":"GO:1904105"}


id: PBO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubp4 interactor Sfp47","termid":"PBO:0001650"}


id: PBO:0079513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine kinase 2","termid":"PBO:0079513"}


id: GO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + ATP + UDP-N-acetylmuramoyl-L-alanine = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate.","definition_xrefs":["RHEA:16429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanine-D-glutamate ligase activity","secondary_identifiers":["EC:6.3.2.9","KEGG_REACTION:R02783","MetaCyc:UDP-NACMURALA-GLU-LIG-RXN"],"synonyms":[{"name":"D-glutamate ligase activity","type":"related"},{"name":"D-glutamate-adding enzyme activity","type":"related"},{"name":"MurD synthetase activity","type":"related"},{"name":"UDP-Mur-NAC-L-Ala:D-Glu ligase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine:glutamate ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase activity","type":"related"}],"termid":"GO:0008764"}


id: PBO:0044555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 1","termid":"PBO:0044555"}


id: PBO:0068130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 437","termid":"PBO:0068130"}


id: PBO:0063224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 4","termid":"PBO:0063224"}


id: PBO:0067522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 665, pseudogene","termid":"PBO:0067522"}


id: GO:0050837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a selenide-sulfide bond to form the cystine-like L-cysteinyl-L-selenocysteine, as in vertebrate selenopeptide P.","definition_xrefs":["RESID:AA0358"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteinyl-L-selenocysteine (obsolete GO:0050837)","termid":"GO:0050837"}


id: GO:0046265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thiocyanate, any anion of thiocyanic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiocyanate metabolic process","termid":"GO:0018969"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"thiocyanate catabolic process","synonyms":[{"name":"thiocyanate breakdown","type":"exact"},{"name":"thiocyanate catabolism","type":"exact"},{"name":"thiocyanate degradation","type":"exact"}],"termid":"GO:0046265"}


id: GO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in size of a blastocyst due to expansion of the blastocoelic cavity cell shape changes and cell proliferation.","definition_xrefs":["ISBN:0198542771","GOC:dph","ISBN:0124020607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst growth","synonyms":[{"name":"blastula growth","type":"related"}],"termid":"GO:0001832"}


id: MONDO:0016888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 6","termid":"MONDO:0016871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 6","secondary_identifiers":["icd11.foundation:241036989","MEDGEN:1825966","GARD:20810","Orphanet:261902","UMLS:C5679667"],"synonyms":[{"name":"partial deletion of chromosome 6p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 6","type":"exact"},{"name":"partial monosomy of chromosome 6p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 6","type":"exact"}],"termid":"MONDO:0016888","xrefs":{"Monarch":{"xref_id":"0016888"}}}


id: PBO:0079251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC23 antisense RNA 1","termid":"PBO:0079251"}


id: PBO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole associated and imprinted","termid":"PBO:0050830"}


id: PBO:0091073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase","termid":"PBO:0091073"}


id: MONDO:0700339
data:
  {"annotated_genes":["SJAG_02384","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85620,85621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"},{"annotations":[86904,86903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957248"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy in which the cause of the disease is a variation in the DNM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"DNM1-encephalopathy and neurodevelopmental disorder","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"DNM1-related DEE","type":"exact"},{"name":"DNM1-related developmental and epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0700339","terms_by_termid":{"MONDO:0014598":null,"MONDO:0957248":null},"xrefs":{"Monarch":{"xref_id":"0700339"}}}


id: GO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of veins of the heart are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vein morphogenesis","termid":"GO:0003169"}


id: MONDO:0015479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"submucosal cleft palate","secondary_identifiers":["MEDGEN:98472","GARD:19976","UMLS:C0432103","icd11.foundation:1848627578","Orphanet:155878"],"termid":"MONDO:0015479","xrefs":{"Monarch":{"xref_id":"0015479"}}}


id: MONDO:0011468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary motor and sensory neuropathy, Okinawa type is a rare, genetic, axonal hereditary motor and sensory neuropathy characterized by the adult-onset of slowly progressive, symmetric, proximal dominant muscle weakness and atrophy, painful muscle cramps, fasciculations and distal sensory impairment, mostly (but not exclusively) in individuals (and their descendents) from the Okinawa region in Japan. Absent deep tendon reflexes, elevated creatine kinase levels and autosomal dominant inheritance are also characteristic.","definition_xrefs":["Orphanet:90117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy, Okinawa type","secondary_identifiers":["UMLS:C1858338","MESH:C535717","GARD:10131","OMIM:604484","MEDGEN:346886"],"synonyms":[{"name":"HMSNO","type":"related"},{"name":"HMSNP","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type","type":"exact"},{"name":"hereditary motor and sensory neuropathy, proximal type, formerly","type":"related"},{"name":"neuropathy, hereditary motor and sensory, Okinawa type","type":"related"}],"termid":"MONDO:0011468","xrefs":{"Monarch":{"xref_id":"0011468"}}}


id: MONDO:0005178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A noninflammatory degenerative joint disease occurring chiefly in older persons, characterized by degeneration of the articular cartilage, hypertrophy of bone at the margins and changes in the synovial membrane. It is accompanied by pain and stiffness, particularly after prolonged activity.","definition_xrefs":["NCIT:C3293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis","secondary_identifiers":["SCTID:396275006","HP:0002758","ICD10CM:M15-M19","MEDGEN:45244","ICD10CM:M19","MESH:D010003","ICD9:715.3","UMLS:C0029408","DOID:8398","icd11.foundation:558562409"],"synonyms":[{"name":"degenerative arthritis","type":"exact"},{"name":"degenerative joint disease","type":"exact"},{"name":"hypertrophic arthritis","type":"exact"},{"name":"osteoarthrosis","type":"exact"},{"name":"osteoarthrosis and allied disorder","type":"exact"}],"termid":"MONDO:0005178","xrefs":{"Monarch":{"xref_id":"0005178"}}}


id: PBO:0005297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,4-glucan synthase Mok14","termid":"PBO:0005297"}


id: GO:0052651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monoacylglycerol, any ester of glycerol in which any one of its hydroxyl groups has been acylated with a fatty acid, the other being non-esterified.","definition_xrefs":["PMID:25290914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoacylglycerol metabolic process","termid":"GO:0046462"},{"relation_name":"is_a","term_name":"acylglycerol catabolic process","termid":"GO:0046464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoacylglycerol catabolic process","synonyms":[{"name":"monoacylglycerol breakdown","type":"exact"},{"name":"monoacylglycerol catabolism","type":"exact"},{"name":"monoacylglycerol degradation","type":"exact"}],"termid":"GO:0052651"}


id: MOD:00508
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:14588022","Unimod:140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISD a-series (C-Term)","synonyms":[{"name":"ISD a-series (C-Term)","type":"related"},{"name":"a-type-ion","type":"related"}],"termid":"MOD:00508"}


id: PBO:0072514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 43","termid":"PBO:0072514"}


id: SO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The boundary at which a restriction enzyme breaks the nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_cleavage_site","termid":"SO:0002204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_cleavage_junction","synonyms":[{"name":"restriction enzyme cleavage junction","type":"exact"}],"termid":"SO:0001688"}


id: MOD:01275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-lysine residue.","definition_xrefs":["PubMed:8597590","Unimod:276#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-[4-(2-aminoethyl)benzenesulfonyl]lysine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01275"}


id: MONDO:0014426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nanophthalmia in which the cause of the disease is a mutation in the TMEM98 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 4","secondary_identifiers":["OMIM:615972","UMLS:C4014848","MEDGEN:863285","GARD:18629"],"synonyms":[{"name":"NNO4","type":"related"},{"name":"Nanophthalmia 4","type":"related"},{"name":"TMEM98 nanophthalmia","type":"exact"},{"name":"nanophthalmia caused by mutation in TMEM98","type":"exact"},{"name":"nanophthalmos 4","type":"exact"},{"name":"nanophthalmos type 4","type":"exact"}],"termid":"MONDO:0014426","xrefs":{"Monarch":{"xref_id":"0014426"}}}


id: PBO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.1.31","termid":"PBO:0005241"}


id: PBO:0068721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 10, pseudogene","termid":"PBO:0068721"}


id: GO:0102061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-cis,6-cis-farnesyl diphosphate = (+)-endo-beta-bergamotene + diphosphoric acid.","definition_xrefs":["GOC:pz","RHEA:30467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"endo-beta-bergamotene synthase activity","secondary_identifiers":["MetaCyc:RXN-10483","EC:4.2.3.53"],"synonyms":[{"name":"(+)-endo-beta-bergamotene synthase ((2Z,6Z)-farnesyl diphosphate cyclizing)","type":"exact"},{"name":"(2Z,6Z)-farnesyl diphosphate = (+)-endo-beta-bergamotene","type":"exact"},{"name":"endo-beta-bergamontene synthase activity","type":"exact"}],"termid":"GO:0102061"}


id: FYPO:0007153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the breakdown of polyphosphate is normal (i.e. indistinguishable from wild type) during a cellular response to phosphate starvation.","definition_xrefs":["PMID:1318242","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal polyphosphate catabolism during cellular response to phosphate starvation","synonyms":[{"name":"normal polyphosphate catabolic process during cellular response to phosphate starvation","type":"exact"},{"name":"normal polyphosphate catabolism during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"normal polyphosphate catabolism during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"normal polyphosphate degradation during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0007153"}


id: PBO:0043683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fate and sterol metabolism associated divergent transcript of MOCOS","termid":"PBO:0043683"}


id: PBO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB13 divergent transcript","termid":"PBO:0045919"}


id: SO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An EST read from the 5' end of a transcript that usually codes for a protein. These regions tend to be conserved across species and do not change much within a gene family.","direct_ancestors":[{"relation_name":"is_a","term_name":"EST","termid":"SO:0000345"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_EST","synonyms":[{"name":"5' EST","type":"exact"},{"name":"five prime EST","type":"exact"}],"termid":"SO:0001208"}


id: PBO:0053525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 520","termid":"PBO:0053525"}


id: MONDO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Bowman's membrane folds or rupture","secondary_identifiers":["ICD9:371.31","SCTID:45382000","MEDGEN:509796","DOID:11552","UMLS:C0155115"],"synonyms":[{"name":"Bowman membrane folds or rupture","type":"exact"},{"name":"folds and/or rupture of bowman's membrane","type":"exact"}],"termid":"MONDO:0001310","xrefs":{"Monarch":{"xref_id":"0001310"}}}


id: GO:0047851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + an omega-dicarboxylic acid + CoASH= AMP + diphosphate + an omega-carboxyacyl-CoA.","definition_xrefs":["EC:6.2.1.23","MetaCyc:DICARBOXYLATE--COA-LIGASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"dicarboxylate-CoA ligase activity","secondary_identifiers":["RHEA:14289"],"synonyms":[{"name":"carboxylyl-CoA synthetase activity","type":"related"},{"name":"omega-dicarboxylate:CoA ligase (AMP-forming)","type":"related"}],"termid":"GO:0047851"}


id: PBO:0062630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 7 (gene/pseudogene)","termid":"PBO:0062630"}


id: GO:1904462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ergosteryl 3-beta-D-glucoside.","definition_xrefs":["PMID:26116408","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"saponin catabolic process","termid":"GO:0016136"},{"relation_name":"is_a","term_name":"beta-glucoside catabolic process","termid":"GO:1901805"},{"relation_name":"is_a","term_name":"ergosteryl 3-beta-D-glucoside metabolic process","termid":"GO:1904461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ergosteryl 3-beta-D-glucoside catabolic process","synonyms":[{"name":"ergosteryl 3-beta-D-glucoside breakdown","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside catabolism","type":"exact"},{"name":"ergosteryl 3-beta-D-glucoside degradation","type":"exact"}],"termid":"GO:1904462"}


id: GO:0016620
data:
  {"annotated_genes":["SJAG_00660","SJAG_03786","SJAG_02945","SJAG_01869","SJAG_06621","SJAG_00674","SJAG_03828","SJAG_00636","SJAG_00482","SJAG_03903","SJAG_02235","SJAG_02961","SJAG_00869","SJAG_06622","SJAG_03293","SJAG_02135","SJAG_00234","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003842"},{"annotations":[101188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"},{"annotations":[76434,78956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004029"},{"annotations":[92154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051269"},{"annotations":[64638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004073"},{"annotations":[76423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004350"},{"annotations":[109712,109714,109709,72851,75068,109708,80774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004365"},{"annotations":[65077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004043"},{"annotations":[71817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003942"},{"annotations":[76398,77910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004777"},{"annotations":[88763,87784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036243"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00482":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00674":null,"SJAG_00869":null,"SJAG_01869":null,"SJAG_02135":null,"SJAG_02235":null,"SJAG_02945":null,"SJAG_02961":null,"SJAG_03293":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1222583","EC:1.2.1.-"],"termid":"GO:0016620","terms_by_termid":{"GO:0003842":null,"GO:0003942":null,"GO:0004029":null,"GO:0004043":null,"GO:0004073":null,"GO:0004350":null,"GO:0004365":null,"GO:0004777":null,"GO:0036243":null,"GO:0051269":null,"GO:0140087":null}}


id: FYPO:0006304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which F-actin forms a large spot in the medial region of the cell, instead of assembling into a contractile ring.","definition_xrefs":["PMID:19713940","PMID:9635188","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0004803","FYPO:0005447"],"is_obsolete":false,"name":"medial F-actin spot present","synonyms":[{"name":"actomyosin contractile ring absent, with medial F-actin spot present","type":"exact"},{"name":"medial F-actin spot present during mitotic cell cycle","type":"related"},{"name":"medial F-actin spot present during vegetative growth","type":"exact"}],"termid":"FYPO:0006304"}


id: GO:0061334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an epithelial cell with respect to other epithelial cells that contributes to the shaping of the Malpighian tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell rearrangement involved in Malpighian tubule morphogenesis","synonyms":[{"name":"cell migration involved in Malpighian tubule morphogenesis","type":"exact"}],"termid":"GO:0061334"}


id: PBO:0030200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_B","termid":"PBO:0030200"}


id: MONDO:0006484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic ductal proliferative lesion of the breast characterized by the formation of secondary lumens and prominent intraductal proliferation of a heterogeneous cellular population that may include epithelial cells, myoepithelial cells, or metaplastic apocrine cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast intraductal proliferative lesion","termid":"MONDO:0004007"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usual ductal breast hyperplasia","secondary_identifiers":["EFO:1000612","ICD9:611.89","MEDGEN:759542","UMLS:C3532429","SCTID:472905007","NCIT:C27941"],"synonyms":[{"name":"UDH","type":"exact"},{"name":"ductal breast hyperplasia of usual type","type":"exact"},{"name":"ordinary intraductal breast hyperplasia","type":"exact"}],"termid":"MONDO:0006484","xrefs":{"Monarch":{"xref_id":"0006484"}}}


id: PBO:0086107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of the cytochrome bc(1) complex; acts as a chaperone for Rip1p and facilitates its insertion into the complex at a late stage of assembly; localized to the mitochondrial matrix; null mutant exhibits a respiratory growth defect and reduced mitochondrial zinc levels, which is characteristic of mutations affecting bc(1) complex assembly; member of the LYR protein family; human LYRM7 is a functional ortholog","termid":"PBO:0086107"}


id: PBO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tsr1 (predicted)","termid":"PBO:0001047"}


id: PBO:0055210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2635","termid":"PBO:0055210"}


id: MONDO:0800250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Graves disease, susceptibility to, X-linked 2","secondary_identifiers":["UMLS:C2678152","MEDGEN:394751"],"synonyms":[{"name":"GRDX2","type":"exact"}],"termid":"MONDO:0800250","xrefs":{"Monarch":{"xref_id":"0800250"}}}


id: PBO:0078337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 3-1","termid":"PBO:0078337"}


id: PBO:0053203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 2","termid":"PBO:0053203"}


id: PBO:0059142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 9","termid":"PBO:0059142"}


id: FYPO:0001292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of CDP-diacylglycerol-serine O-phosphatidyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal CDP-diacylglycerol-serine O-phosphatidyltransferase activity","termid":"FYPO:0001291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased CDP-diacylglycerol-serine O-phosphatidyltransferase activity","synonyms":[{"name":"reduced CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"}],"termid":"FYPO:0001292"}


id: GO:0009904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The relocation process in which chloroplasts in photosynthetic cells move toward a brighter area in a cell to optimize photosynthesis.","definition_xrefs":["PMID:11978863","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast relocation","termid":"GO:0009902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chloroplast accumulation movement","synonyms":[{"name":"low-fluence-rate response","type":"related"}],"termid":"GO:0009904"}


id: PBO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 2","termid":"PBO:0060639"}


id: GO:1905553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:TermGenie","GOC:BHF_telomere","GO_REF:0000058","PMID:23201774","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel branching","synonyms":[{"name":"regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905553"}


id: PBO:0056643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 4","termid":"PBO:0056643"}


id: GO:0065002
data:
  {"annotated_genes":["SJAG_02034","SJAG_02797","SJAG_04129","SJAG_05315","SJAG_02354","SJAG_00959","SJAG_02588","SJAG_00064","SJAG_02997","SJAG_03396","SJAG_02693","SJAG_05950","SJAG_04428","SJAG_02619","SJAG_02330","SJAG_02208","SJAG_00702","SJAG_03324","SJAG_04857","SJAG_00891","SJAG_01165","SJAG_03440","SJAG_03684","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108624,73519,80627,97663,98376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031204"},{"annotations":[72298,96804,102581,70376,71073,111699,79901,73720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[62738,70945,74152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[115602,98898,64249,117606],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[74029,75768,73534,98378,102900,108626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The directed movement of proteins in a cell, from one side of a membrane to another by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_00959":null,"SJAG_01165":null,"SJAG_02034":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02588":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03396":null,"SJAG_03440":null,"SJAG_03684":null,"SJAG_04129":null,"SJAG_04428":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"intracellular protein transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"intracellular membrane translocation of a protein","type":"exact"},{"name":"intracellular protein membrane transport","type":"exact"},{"name":"intracellular protein transport across a membrane","type":"exact"}],"termid":"GO:0065002","terms_by_termid":{"GO:0006616":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0031204":null}}


id: GO:0031305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mitochondrial inner membrane (obsolete GO:0031305)","synonyms":[{"name":"integral to mitochondrial inner membrane","type":"narrow"}],"termid":"GO:0031305"}


id: PBO:0003151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF-5A-deoxyhypusine synthase (predicted)","termid":"PBO:0003151"}


id: MONDO:0006747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease caused by the liberation of exotoxins of clostridium perfringens in the intestines of sheep, goats, cattle, foals, and piglets. Type B enterotoxemia in lambs is lamb dysentery; type C enterotoxemia in mature sheep produces 'struck', and in calves, lambs and piglets it produces hemorrhagic enterotoxemia; type D enterotoxemia in sheep and goats is pulpy-kidney disease or overeating disease.","definition_xrefs":["MESH:D004767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"goat disease","termid":"MONDO:0025003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterotoxemia","secondary_identifiers":["ICD9:799.89","SCTID:370514003","EFO:1000922"],"termid":"MONDO:0006747","xrefs":{"Monarch":{"xref_id":"0006747"}}}


id: GO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of haustorium mother cell formation","termid":"GO:0075193"},{"relation_name":"positively_regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of haustorium mother cell formation","synonyms":[{"name":"positive regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075194"}


id: PBO:0030950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_aggregation","termid":"PBO:0030950"}


id: MONDO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-neoplastic overgrowth of bone.","definition_xrefs":["NCIT:C3029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exostosis","secondary_identifiers":["ICD9:726.91","MEDGEN:257035","DOID:203","SCTID:235231000119100","SCTID:416189003","UMLS:C1442903"],"synonyms":[{"name":"bone osteophyte","type":"exact"},{"name":"bone spur","type":"exact"},{"name":"bony outgrowth","type":"exact"},{"name":"exostosis","type":"exact"},{"name":"orbital exostosis","type":"narrow"},{"name":"osteophyte","type":"exact"},{"name":"swimmer's exostosis","type":"narrow"}],"termid":"MONDO:0002181","xrefs":{"Monarch":{"xref_id":"0002181"}}}


id: FYPO:0004162
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability upon glucose starvation","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability upon glucose starvation","type":"exact"},{"name":"loss of cell population viability upon glucose starvation","type":"exact"},{"name":"loss of viability upon glucose depletion","type":"exact"},{"name":"loss of viability upon glucose deprivation","type":"exact"},{"name":"loss of viability upon glucose limitation","type":"related"},{"name":"reduced viability upon glucose starvation","type":"exact"}],"termid":"FYPO:0004162","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0005231":null}}


id: GO:1990950
data:
  {"annotated_genes":["SJAG_04853","SJAG_00145","SJAG_00666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100462,102606],"is_not":false,"summary":null,"term":"GO:1990950"},{"annotations":[95494],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from metaphase to anaphase as part of meiosis II.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase/anaphase transition of meiotic cell cycle","termid":"GO:0044785"},{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00666":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"metaphase/anaphase transition of meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiosis II metaphase/anaphase transition","type":"exact"},{"name":"second meiotic metaphase/anaphase transition","type":"related"}],"termid":"GO:1990950","terms_by_termid":{"GO:1905191":null,"GO:1990950":null}}


id: PBO:0061850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oleoyl-ACP hydrolase","termid":"PBO:0061850"}


id: FYPO:0001530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of GTPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal GTPase activity","termid":"FYPO:0001530"}


id: GO:1904654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lung alveolus development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23962064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"negatively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung alveolus development","synonyms":[{"name":"down regulation of alveolarization","type":"exact"},{"name":"down regulation of alveologenesis","type":"exact"},{"name":"down regulation of lung alveolus development","type":"exact"},{"name":"down-regulation of alveolarization","type":"exact"},{"name":"down-regulation of alveologenesis","type":"exact"},{"name":"down-regulation of lung alveolus development","type":"exact"},{"name":"downregulation of alveolarization","type":"exact"},{"name":"downregulation of alveologenesis","type":"exact"},{"name":"downregulation of lung alveolus development","type":"exact"},{"name":"inhibition of alveolarization","type":"narrow"},{"name":"inhibition of alveologenesis","type":"narrow"},{"name":"inhibition of lung alveolus development","type":"narrow"},{"name":"negative regulation of alveolarization","type":"exact"},{"name":"negative regulation of alveologenesis","type":"exact"}],"termid":"GO:1904654"}


id: PBO:0079873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A regulator of nonsense mediated mRNA decay","termid":"PBO:0079873"}


id: GO:0100068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates pyrimidine-containing compound salvage.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyrimidine-containing compound salvage by transcription from RNA polymerase II promoter (obsolete GO:0100068)","termid":"GO:0100068"}


id: MONDO:0004919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocele","termid":"MONDO:0004920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infected hydrocele","secondary_identifiers":["UMLS:C0156300","MEDGEN:510235","SCTID:11666007","icd11.foundation:329423502","ICD10CM:N43.1","ICD9:603.1","DOID:9911"],"termid":"MONDO:0004919","xrefs":{"Monarch":{"xref_id":"0004919"}}}


id: PBO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF6","termid":"PBO:0005804"}


id: PBO:0080800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 6","termid":"PBO:0080800"}


id: PBO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-NF-X1 zinc finger","termid":"PBO:0005703"}


id: MONDO:0008846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital atransferrinemia is a very rare hematologic disease caused by a transferrin (TF) deficiency and characterized by microcytic, hypochromic anemia (manifesting with pallor, fatigue and growth retardation) and iron overload, and that can be fatal if left untreated.","definition_xrefs":["Orphanet:1195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"atransferrinemia","secondary_identifiers":["NANDO:2200617","GARD:9595","MEDGEN:105489","SCTID:111571009","UMLS:C0521802","MESH:C538259","DOID:0050649","NANDO:2100180","NCIT:C125693","NORD:819","OMIM:209300"],"synonyms":[{"name":"atransferrinemia","type":"exact"},{"name":"congenital atransferrinemia","type":"exact"},{"name":"congenital hypotransferrinemia","type":"exact"},{"name":"familial hypotransferrinemia","type":"exact"},{"name":"hereditary atransferrinemia","type":"exact"},{"name":"hypotransferrinemia, familial","type":"related"},{"name":"transferrin serum level quantitative trait locus 1","type":"related"}],"termid":"MONDO:0008846","xrefs":{"Monarch":{"xref_id":"0008846"}}}


id: MONDO:1010975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic encephalopathy that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic encephalopathy, non-human animal","termid":"MONDO:1010230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic encephalopathy, sheep","secondary_identifiers":["OMIA:000453-9940"],"termid":"MONDO:1010975","xrefs":{"Monarch":{"xref_id":"1010975"}}}


id: PBO:0059190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member F","termid":"PBO:0059190"}


id: MONDO:0013160
data:
  {"annotated_genes":["SJAG_04316","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87014,87015],"is_not":false,"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","definition":"An autosomal recessive inherited congenital muscular dystrophy caused by mutations in the POMT2 gene. It is characterized by mental retardation and mild structural brain abnormalities resulting from defective glycosylation of alpha-dystroglycan.","definition_xrefs":["NCIT:C126690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type B","termid":"MONDO:0000172"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMT2","termid":"MONDO:0700071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112380","MEDGEN:461766","OMIM:613156","UMLS:C3150416"],"synonyms":[{"name":"MDDGB2","type":"related"},{"name":"congenital muscular dystrophy-POMT2 related","type":"exact"},{"name":"congenital muscular dystrophy-dystroglycanopathy with intellectual disability type B2","type":"exact"},{"name":"congenital muscular dystrophy-dystroglycanopathy with mental retardation type B2","type":"exact"},{"name":"muscular dystrophy, congenital, Pomt2-related","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B, 2","type":"related"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with mental retardation), type B, 2","type":"related"}],"termid":"MONDO:0013160","terms_by_termid":{"MONDO:0013160":null},"xrefs":{"Monarch":{"xref_id":"0013160"}}}


id: MONDO:1012775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cancer that occurs in pigs due to a mutation in the RUNX gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"cancer, pig","termid":"MONDO:1012572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer, RUNX-related, pig","secondary_identifiers":["OMIA:002054-9823"],"termid":"MONDO:1012775","xrefs":{"Monarch":{"xref_id":"1012775"}}}


id: PATO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001175 urine composition (obsolete PATO:0001175)","termid":"PATO:0001175"}


id: FYPO:0000695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"},{"relation_name":"is_a","term_name":"increased DNA N-glycosylase activity","termid":"FYPO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"increased DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000695"}


id: PBO:0084214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I; required for the integrity of the active PtdIns-3-kinase complex I by maintaining an association between Vps15p-Vps34p and Atg14p-Vps30p subcomplexes; localizes to the pre-autophagosomal structure (PAS) in an Atg14p-dependent manner; ATG38 is non-essential but is required for macroautophagy","termid":"PBO:0084214"}


id: MONDO:0012256
data:
  {"annotated_genes":["SJAG_04506","SJAG_00199","SJAG_04292"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85534,85535,85536],"is_not":false,"summary":null,"term":"MONDO:0012256"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 28 is a pure form of hereditary spastic paraplegia characterized by a childhood or adolescent onset of slowly progressive, pure crural muscle spastic paraparesis which manifests with mild lower limb weakness, gait difficulties, extensor plantar responses, and hyperreflexia of lower extremities. Less common manifestations reported include cerebellar oculomotor disturbance with saccadic eye pursuit, pes cavus and scoliosis. Some patients also present pin and vibration sensory loss in distal legs.","definition_xrefs":["Orphanet:101008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_04292":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:332174","SCTID:763376002","MESH:C563732","DOID:0110779","GARD:16941","UMLS:C1836295","OMIM:609340"],"synonyms":[{"name":"DDHD1 autosomal recessive pure spastic paraplegia","type":"exact"},{"name":"SPG28","type":"exact"},{"name":"autosomal recessive pure spastic paraplegia caused by mutation in DDHD1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 28","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 28","type":"exact"},{"name":"hereditary spastic paraplegia 28","type":"exact"},{"name":"hereditary spastic paraplegia type 28","type":"exact"},{"name":"spastic paraplegia 28, autosomal recessive","type":"related"}],"termid":"MONDO:0012256","terms_by_termid":{"MONDO:0012256":null},"xrefs":{"Monarch":{"xref_id":"0012256"}}}


id: GO:0006504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent or non-covalent attachment of a geranylgeranyl group to the carboxy-terminus of a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal protein geranylgeranylation (obsolete GO:0006504)","synonyms":[{"name":"C-terminal protein geranylgeranylation","type":"exact"}],"termid":"GO:0006504"}


id: PBO:0113457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; increases the activity and thermal stability of the complex, along with Pop2p; protein abundance increases in response to DNA replication stress","termid":"PBO:0113457"}


id: GO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by chemoreceptor signalling","type":"exact"}],"termid":"GO:0002007"}


id: PBO:0077342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 81","termid":"PBO:0077342"}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: GO:0038076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to an innate immune response.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in innate immune response (obsolete GO:0038076)","synonyms":[{"name":"MAP2K activity involved in innate immune response","type":"exact"},{"name":"MAPKK activity involved in innate immune response","type":"exact"}],"termid":"GO:0038076"}


id: MONDO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Mitochondrial oxidative phosphorylation disorder due to nuclear DNA anomalies is a group of clinically heterogeneous diseases, commonly defined by lack of cellular energy due to defects of oxidative phosphorylation (OXPHOS), resulting from pathogenic mutations in the nuclear DNA. Mitochondrial oxidative phosphorylation disorder due to nuclear DNA anomalies includes diseases classified according to defects in: genes encoding structural components of OXPHOS complexes (such as Leigh syndrome, coenzyme Q10 deficiency); genes encoding assembly factors of OXPHOS complexes (such as GRACILE syndrome); genes altering the stability of mitochondrial DNA (such as autosomal dominant progressive external ophthalmoplegia, mitochondrial DNA depletion syndrome); mitochondrial protein synthesis.","definition_xrefs":["Orphanet:2443"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to nuclear DNA anomalies (obsolete MONDO:0016578)","synonyms":[{"name":"OXPHOS disease due to nDNA anomalies","type":"exact"},{"name":"OXPHOS disease due to nuclear DNA anomalies","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to nDNA anomalies","type":"exact"}],"termid":"MONDO:0016578","xrefs":{"Monarch":{"xref_id":"0016578"}}}


id: PBO:0086166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for spore wall formation; subunit of leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms ring-like structure at leading edge of prospore membrane during meiosis II; mediates assembly of LEP complex, formation of ring-like structure via interaction with spindle pole body components, and prospore membrane maturation; potentially phosphorylated by Cdc28p; ADY3 has a paralog, CNM67, that arose from the whole genome duplication","termid":"PBO:0086166"}


id: GO:0021850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of glioblasts in the subpallium. These cells will give rise to oligodendrocytes.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium glioblast cell division","synonyms":[{"name":"glioblast cell division in subpallium","type":"exact"},{"name":"glioblast division in ventral telencephalon","type":"exact"}],"termid":"GO:0021850"}


id: PBO:0011109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome remodeling protein Spt6","termid":"PBO:0011109"}


id: PBO:0005205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase (predicted)","termid":"PBO:0005205"}


id: PBO:0083447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BNA5","termid":"PBO:0083447"}


id: PBO:0000879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0000879"}


id: PBO:0053933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1232","termid":"PBO:0053933"}


id: GO:0140857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-threonine (position 45) + ATP = histone H3-phosphothreonine (position 45) + ADP. This reaction is the addition of a phosphate group to the threonine residue at position 45 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0003824","GO:0004672","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H3T45 kinase activity","synonyms":[{"name":"histone kinase activity (H3-T45 specific)","type":"exact"},{"name":"histone threonine kinase activity (H3-T45 specific)","type":"exact"},{"name":"histone-threonine kinase activity (H3-T45 specific)","type":"exact"}],"termid":"GO:0140857"}


id: MONDO:0017447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital absence/hypoplasia of thumb is a rare developmental defect during embryogenesis characterized by underdevelopment of the thumb, ranging from a slight decrease in thumb size to complete absence of the thumb. The malformation may occur isolated, combined to other defects of the hand or upper limb, or as part of a multiple congenital anomaly syndrome.","definition_xrefs":["Orphanet:294988"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of thumb (obsolete MONDO:0017447)","synonyms":[{"name":"thumb hypodactyly","type":"exact"},{"name":"thumb oligodactyly","type":"exact"}],"termid":"MONDO:0017447","xrefs":{"Monarch":{"xref_id":"0017447"}}}


id: GO:0046487
data:
  {"annotated_genes":["SJAG_01432","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105411,101349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glyoxylate, the anion of glyoxylic acid, HOC-COOH.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glyoxylate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glyoxylate metabolism","type":"exact"}],"termid":"GO:0046487","terms_by_termid":{"GO:0009436":null}}


id: FYPO:0002042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to iron ion starvation","termid":"FYPO:0003196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to iron ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to iron ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to iron starvation","type":"exact"},{"name":"decreased RNA level during iron ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to iron ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0002042"}


id: PR:Q10328
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- phx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox transcription factor phx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC32A11.03c","synonyms":[{"name":"Spom972h-phx1","type":"exact"}],"termid":"PR:Q10328"}


id: GO:2001240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction in absence of ligand","termid":"GO:1901099"},{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001237"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:2001239"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"negative regulation of dependence receptor signaling pathway","type":"related"},{"name":"negative regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"negative regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001240"}


id: PBO:0005658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S28, Rps2802","termid":"PBO:0005658"}


id: GO:0015505
data:
  {"annotated_genes":["SJAG_04714"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95871],"is_not":false,"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: uracil(out) + cation(out) = uracil(in) + cation(in).","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uracil transmembrane transporter activity","termid":"GO:0015210"},{"relation_name":"is_a","term_name":"nucleobase:monoatomic cation symporter activity","termid":"GO:0015391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04714":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"uracil:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uracil permease activity","type":"related"},{"name":"uracil:cation symporter activity","type":"broad"}],"termid":"GO:0015505","terms_by_termid":{"GO:0015505":null}}


id: FYPO:0005171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased uracil import","synonyms":[{"name":"decreased uracil import across plasma membrane","type":"exact"},{"name":"decreased uracil import during mitotic cell cycle","type":"related"},{"name":"decreased uracil import during vegetative growth","type":"exact"},{"name":"decreased uracil import into cell","type":"exact"},{"name":"decreased uracil uptake","type":"exact"},{"name":"reduced uracil import","type":"exact"}],"termid":"FYPO:0005171"}


id: GO:0043314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of neutrophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of neutrophil degranulation","termid":"GO:0043313"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"neutrophil degranulation","termid":"GO:0043312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil degranulation","synonyms":[{"name":"down regulation of neutrophil degranulation","type":"exact"},{"name":"down-regulation of neutrophil degranulation","type":"exact"},{"name":"downregulation of neutrophil degranulation","type":"exact"},{"name":"inhibition of neutrophil degranulation","type":"narrow"},{"name":"negative regulation of neutrophil granule exocytosis","type":"exact"}],"termid":"GO:0043314"}


id: MONDO:0044749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked congenital stationary night blindness (XLCSNB) is a disorder of the retina. People with this condition typically experience night blindness and other vision problems, including loss of sharpness (reduced visual acuity), severe nearsightedness (myopia), nystagmus,and strabismus. Color vision is typically not affected. These vision problems are usually evident at birth, but tend to be stable (stationary) over time. There aretwo major types of XLCSNB: the complete form and the incomplete form. Bothtypes have very similar signs and symptoms. However, everyone with the complete form has night blindness, while not all people with the incomplete form have night blindness. The types are distinguished by their genetic cause.","definition_xrefs":["GARD:0003995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"X-linked congenital stationary night blindness","secondary_identifiers":["GARD:3995"],"synonyms":[{"name":"X-linked CSNB","type":"exact"},{"name":"XLCSNB","type":"exact"},{"name":"congenital stationary night blindness, X-linked","type":"exact"}],"termid":"MONDO:0044749","xrefs":{"Monarch":{"xref_id":"0044749"}}}


id: MONDO:0018491
data:
  {"annotated_genes":["SJAG_02313","SJAG_02791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009736"},{"annotations":[87229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014466"},{"annotations":[87271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011152"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurometabolic disorder due to serine deficiency","termid":"MONDO:0018162"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02313":null,"SJAG_02791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-phosphoglycerate dehydrogenase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:460538363","ICD9:270.7","SCTID:303098002","UMLS:C0580190","Orphanet:422519","MEDGEN:663158"],"termid":"MONDO:0018491","terms_by_termid":{"MONDO:0009736":null,"MONDO:0011152":null,"MONDO:0014466":null},"xrefs":{"Monarch":{"xref_id":"0018491"}}}


id: MONDO:0021002
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"A disease characterized by the presence of syndactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"syndactyly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D013576","HP:0001159","DOID:11193","ICD9:755.1","MedDRA:10042778","MEDGEN:52619","UMLS:C0039075"],"synonyms":[{"name":"syndactyly (disease)","type":"exact"}],"termid":"MONDO:0021002","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0021002"}}}


id: PBO:0011155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Las1 protein","termid":"PBO:0011155"}


id: PBO:0049930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hedgehog acyltransferase like","termid":"PBO:0049930"}


id: PBO:0089785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notchless-like ribosome biogenesis protein Rsa4","termid":"PBO:0089785"}


id: GO:0033862
data:
  {"annotated_genes":["SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80760],"is_not":false,"summary":null,"term":"GO:0033862"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UMP = ADP + UDP.","definition_xrefs":["EC:2.7.4.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"},{"relation_name":"is_a","term_name":"nucleoside monophosphate kinase activity","termid":"GO:0050145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00779":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UMP kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24400","MetaCyc:2.7.4.22-RXN"],"synonyms":[{"name":"ATP:UMP phosphotransferase activity","type":"related"},{"name":"PyrH","type":"related"},{"name":"SmbA","type":"related"},{"name":"UMP-kinase activity","type":"related"},{"name":"UMPK","type":"related"},{"name":"uridine monophosphate kinase activity","type":"related"}],"termid":"GO:0033862","terms_by_termid":{"GO:0033862":null}}


id: MONDO:0005523
data:
  {"annotated_genes":["SJAG_04270","SJAG_01036"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009025"},{"annotations":[87597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"}]},"cv_name":"mondo","definition":"Errors in metabolic processing of steroids resulting from inborn genetic mutations that are inherited or acquired in utero.","definition_xrefs":["MESH:D043202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"steroid inherited metabolic disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:1701","EFO:0005590","MEDGEN:219772","UMLS:C1257809"],"termid":"MONDO:0005523","terms_by_termid":{"MONDO:0009025":null,"MONDO:0013310":null},"xrefs":{"Monarch":{"xref_id":"0005523"}}}


id: PBO:0055835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 5","termid":"PBO:0055835"}


id: GO:0043411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myopalladin, a myofibrillar protein with titin-like Ig domains.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myopalladin binding (obsolete GO:0043411)","synonyms":[{"name":"myopalladin binding","type":"exact"}],"termid":"GO:0043411"}


id: PBO:0071344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 2","termid":"PBO:0071344"}


id: GO:0005572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcribed untranslated RNA (obsolete GO:0005572)","synonyms":[{"name":"RNA polymerase II transcribed untranslated RNA","type":"exact"}],"termid":"GO:0005572"}


id: GO:0010283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pinoresinol + NADPH + H+ = lariciresinol + NADP+.","definition_xrefs":["PMID:10066819","PMID:7592828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pinoresinol reductase activity","termid":"GO:0010283"}


id: GO:0098966
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the extracellular matrix that lies within the perisynaptic space.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"},{"relation_name":"part_of","term_name":"synapse-associated extracellular matrix","termid":"GO:0099535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"perisynaptic extracellular matrix","synonyms":[{"name":"extrasynaptic extracellular matrix","type":"exact"},{"name":"perisynaptic ECM","type":"exact"}],"termid":"GO:0098966"}


id: PBO:0088772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Iss1","termid":"PBO:0088772"}


id: PBO:0116789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CERK like autophagy regulator","termid":"PBO:0116789"}


id: MONDO:0015161
data:
  {"annotated_genes":["SJAG_01410","SJAG_00984","SJAG_02431","SJAG_00322","SJAG_00504","SJAG_00197","SJAG_02200","SJAG_01444","SJAG_02539","SJAG_00539","SJAG_03153","SJAG_04995","SJAG_02855","SJAG_02349","SJAG_05180","SJAG_01863","SJAG_00731","SJAG_02879","SJAG_03703","SJAG_00288","SJAG_04222","SJAG_02708","SJAG_01213","SJAG_01065","SJAG_02556","SJAG_01615","SJAG_00611","SJAG_03396","SJAG_00640","SJAG_02618","SJAG_00612","SJAG_03847","SJAG_01677","SJAG_01644","SJAG_03578","SJAG_02339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[85968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012064"},{"annotations":[87354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010879"},{"annotations":[87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007204"},{"annotations":[85796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014573"},{"annotations":[87511,87510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"},{"annotations":[86079,86080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"},{"annotations":[87320,87319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011911"},{"annotations":[86149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014801"},{"annotations":[86670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[87094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[85377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[87349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[87353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[87350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[86480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[87603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012853"},{"annotations":[87525,87524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008675"},{"annotations":[86534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[85837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"},{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012074"},{"annotations":[85533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"},{"annotations":[87598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009623"},{"annotations":[85890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013118"},{"annotations":[85756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009903"},{"annotations":[85917,85916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[85563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009998"},{"annotations":[87086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"},{"annotations":[87376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[86034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[85709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"},{"annotations":[85871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030077"},{"annotations":[86671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013252"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple 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disability","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:102285","UMLS:C5680373","MEDGEN:1842829","GARD:19833"],"synonyms":[{"name":"MCA without intellectual disability","type":"exact"},{"name":"multiple congenital anomalies without intellectual disability with or without dysmorphism","type":"exact"}],"termid":"MONDO:0015161","terms_by_termid":{"MONDO:0007204":null,"MONDO:0007943":null,"MONDO:0008675":null,"MONDO:0009558":null,"MONDO:0009623":null,"MONDO:0009670":null,"MONDO:0009903":null,"MONDO:0009955":null,"MONDO:0009998":null,"MONDO:0010408":null,"MONDO:0010621":null,"MONDO:0010879":null,"MONDO:0011911":null,"MONDO:0012064":null,"MONDO:0012074":null,"MONDO:0012656":null,"MONDO:0012853":null,"MONDO:0013118":null,"MONDO:0013248":null,"MONDO:0013252":null,"MONDO:0013385":null,"MONDO:0013499":null,"MONDO:0014108":null,"MONDO:0014573":null,"MONDO:0014801":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0020746":null,"MONDO:0030067":null,"MONDO:0030077":null,"MONDO:0100104":null,"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0015161"}}}


id: MONDO:0017315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-webbed neck-heart disease syndrome is characterized by short stature, intellectual deficit, facial dysmorphism, short webbed neck, skin changes and congenital heart defects. It has been reported in four Arab Bedouin sibs born to consanguineous parents.","definition_xrefs":["Orphanet:2865"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-webbed neck-heart disease syndrome","secondary_identifiers":["SCTID:721073008","GARD:583","MESH:C535613","MEDGEN:419677","UMLS:C2930950"],"synonyms":[{"name":"Al Gazali Aziz Salem syndrome","type":"related"},{"name":"Al Gazali-Aziz-Salem syndrome","type":"exact"},{"name":"short stature, intellectual disability, facial dysmorphism, short webbed neck, skin changes and congenital heart disease","type":"related"},{"name":"short stature, webbed neck, heart disease","type":"related"}],"termid":"MONDO:0017315","xrefs":{"Monarch":{"xref_id":"0017315"}}}


id: FYPO:0006692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic sister chromatid separation, producing inviable daughter cells, and in which the septum forms so as to separate the nucleus into two unequal masses, each in one compartment.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000641","FYPO:0000032","FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"cut with septum between unequally sized nuclei","synonyms":[{"name":"cut with septum between unequally sized nuclei during mitotic cell cycle","type":"related"},{"name":"cut with septum between unequally sized nuclei during vegetative growth","type":"exact"},{"name":"cut with unequally sized nuclei, one either side of septum","type":"exact"},{"name":"septation following abnormal mitotic sister chromatid segregation, with septum between unequally sized nuclei","type":"exact"}],"termid":"FYPO:0006692"}


id: FYPO:0004968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is decreased relative to normal under conditions of phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"decreased vegetative cell population growth during phosphate starvation","synonyms":[{"name":"decreased vegetative cell population growth during phosphate depletion","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate deprivation","type":"exact"},{"name":"decreased vegetative cell population growth during phosphate limitation","type":"exact"},{"name":"decreased vegetative cell population growth in response to phosphate starvation","type":"exact"},{"name":"reduced vegetative cell population growth during phosphate starvation","type":"exact"},{"name":"sensitive to phosphate starvation","type":"related"},{"name":"slow vegetative cell population growth during phosphate starvation","type":"narrow"}],"termid":"FYPO:0004968"}


id: FYPO:0000790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cortical patch.","definition_xrefs":["GO:0044396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actin cortical patch organization","synonyms":[{"name":"abnormal F-actin patch organization","type":"exact"},{"name":"abnormal actin cortical patch organisation","type":"exact"},{"name":"abnormal actin cortical patch organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch organization during vegetative growth","type":"exact"},{"name":"abnormal actin patch organization","type":"exact"}],"termid":"FYPO:0000790"}


id: GO:1900378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"positively_regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of secondary metabolite biosynthetic process","synonyms":[{"name":"activation of secondary metabolite biosynthesis","type":"exact"},{"name":"activation of secondary metabolite biosynthetic process","type":"narrow"},{"name":"positive regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"up regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"up regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"up-regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"up-regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"upregulation of secondary metabolite biosynthesis","type":"exact"},{"name":"upregulation of secondary metabolite biosynthetic process","type":"exact"}],"termid":"GO:1900378"}


id: PBO:0057339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 525","termid":"PBO:0057339"}


id: MOD:00638
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of an L-arginine residue with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated L-arginine.","definition_xrefs":["Unimod:330","PubMed:15782174"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"dimethylated L-arginine","termid":"MOD:00783"},{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,6x(2)H labeled dimethylated L-arginine","synonyms":[{"name":"Dimethyl:2H(6)13C(2)","type":"related"},{"name":"dimethylated arginine","type":"related"}],"termid":"MOD:00638"}


id: PBO:0067744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 43","termid":"PBO:0067744"}


id: PBO:0054593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1996","termid":"PBO:0054593"}


id: PBO:0091484
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ris-Related Protein 1","termid":"PBO:0091484"}


id: GO:0006952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response","secondary_identifiers":["GO:0002217","GO:0042829"],"synonyms":[{"name":"antimicrobial peptide activity","type":"related"},{"name":"defence response","type":"exact"},{"name":"defense/immunity protein activity","type":"related"},{"name":"physiological defense response","type":"exact"}],"termid":"GO:0006952"}


id: MONDO:1010694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AL amyloidosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AL amyloidosis, non-human animal","termid":"MONDO:1010093"},{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, domestic cat","termid":"MONDO:1010459"},{"relation_name":"is_a","term_name":"amyloidosis, domestic cat","termid":"MONDO:1011468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AL amyloidosis, domestic cat","secondary_identifiers":["OMIA:000039-9685"],"termid":"MONDO:1010694","xrefs":{"Monarch":{"xref_id":"1010694"}}}


id: GO:0016799
data:
  {"annotated_genes":["SJAG_01781","SJAG_02528","SJAG_03724","SJAG_02179","SJAG_02261","SJAG_01974","SJAG_01971","SJAG_04927","SJAG_00957","SJAG_01119"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[76132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070694"},{"annotations":[96479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"},{"annotations":[73947,96480,74458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"},{"annotations":[101899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052820"},{"annotations":[101900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008725"},{"annotations":[101901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043916"},{"annotations":[90995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070635"},{"annotations":[90996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070636"},{"annotations":[112480,75606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008477"},{"annotations":[73949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"},{"annotations":[98916,98915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106432"},{"annotations":[67452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004844"},{"annotations":[90998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045437"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any N-glycosyl bond.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on glycosyl bonds","termid":"GO:0016798"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01119":null,"SJAG_01781":null,"SJAG_01971":null,"SJAG_01974":null,"SJAG_02179":null,"SJAG_02261":null,"SJAG_02528":null,"SJAG_03724":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, hydrolyzing N-glycosyl compounds","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.2.2.-"],"termid":"GO:0016799","terms_by_termid":{"GO:0000701":null,"GO:0004844":null,"GO:0008477":null,"GO:0008725":null,"GO:0034039":null,"GO:0034042":null,"GO:0034043":null,"GO:0043916":null,"GO:0045437":null,"GO:0052820":null,"GO:0070635":null,"GO:0070636":null,"GO:0070694":null,"GO:0106432":null}}


id: MONDO:0007599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor 9 and Factor XI, combined deficiency of","secondary_identifiers":["MESH:C565022","OMIM:134540","UMLS:C1851374","MEDGEN:377012"],"synonyms":[{"name":"factor IX and factor XI, combined deficiency OF","type":"related"},{"name":"familial multiple coagulation Factor deficiency 6","type":"related"},{"name":"multiple coagulation Factor deficiency 6","type":"related"}],"termid":"MONDO:0007599","xrefs":{"Monarch":{"xref_id":"0007599"}}}


id: MONDO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 2 is an uniparental disomy of maternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:96179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 2","secondary_identifiers":["SCTID:766237006","MEDGEN:1631626","icd11.foundation:2067230711","UMLS:C4707718","GARD:19331"],"synonyms":[{"name":"UPD(2)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 2","type":"exact"}],"termid":"MONDO:0019910","xrefs":{"Monarch":{"xref_id":"0019910"}}}


id: MONDO:0015944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Axial mesodermal dysplasia spectrum is a rare developmental defect during embryogenesis syndrome characterized by congenital manifestations of both oculo-auriculo-vertebral spectrum and caudal regression sequence. Phenotype is highly variable but patients typically present facial dysmorphism (incl. asymmetry, hypertelorism), auricular abnormalities (e.g. preauricular tags, microtia, absence of middle ear ossicles), skeletal malformations (hemivertebrae, hip dislocation, sacral agenesis/dysplasia, talipes equinovarus, flexion deformity of lower limbs), cardiac defects (dextrocardia, septal defects), renal and genitourinary anomalies (such as renal agensis/dysplasia, abnormal external genitalia, cryptorchidia), as well as anal anomalies such as anal atresia and rectovesical fistula.","definition_xrefs":["Orphanet:1834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axial mesodermal dysplasia spectrum","secondary_identifiers":["GARD:213","MEDGEN:419853","MESH:C537790","UMLS:C2931613","SCTID:765755006"],"synonyms":[{"name":"Russell Weaver Bull syndrome","type":"related"},{"name":"Russell-Weaver-Bull syndrome","type":"exact"},{"name":"blastogenesis defect","type":"exact"}],"termid":"MONDO:0015944","xrefs":{"Monarch":{"xref_id":"0015944"}}}


id: PBO:0066924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 226","termid":"PBO:0066924"}


id: PBO:0047792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box F1","termid":"PBO:0047792"}


id: GO:1901206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901206)","synonyms":[{"name":"activation of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"activation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"upregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901206"}


id: PBO:0084378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-ornithine transaminase (OTAse); catalyzes the second step of arginine degradation, expression is dually-regulated by allophanate induction and a specific arginine induction process; not nitrogen catabolite repression sensitive; protein abundance increases in response to DNA replication stress; human homolog OAT complements yeast null mutant","termid":"PBO:0084378"}


id: GO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an immune cell in response to an external stimulus a part of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration involved in immune response","termid":"GO:0002522"},{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte chemotaxis involved in immune response","synonyms":[{"name":"immune cell chemotaxis during immune response","type":"exact"},{"name":"leucocyte chemotaxis during immune response","type":"exact"}],"termid":"GO:0002233"}


id: MONDO:0004126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the thyroid gland. This category includes Hashimoto thyroiditis, Riedel thyroiditis, acute thyroiditis, subacute thyroiditis, and radiation-induced thyroiditis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis","secondary_identifiers":["ICD9:245.9","UMLS:C0040147","MESH:D013966","ICD9:245","DOID:7166","HP:0100646","MEDGEN:21548","NCIT:C26894","SCTID:82119001","icd11.foundation:587793334"],"synonyms":[{"name":"inflammation of thyroid gland","type":"exact"},{"name":"thyroid gland inflammation","type":"exact"},{"name":"thyroiditis","type":"exact"},{"name":"thyroiditis (disease)","type":"exact"}],"termid":"MONDO:0004126","xrefs":{"Monarch":{"xref_id":"0004126"}}}


id: PBO:0061917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 5","termid":"PBO:0061917"}


id: PBO:0038593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase family member 11","termid":"PBO:0038593"}


id: GO:0060573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of the identity of a cell in a field of cells that is being instructed as to how to differentiate. Once specification has taken place, that cell will be committed to differentiate down a specific pathway if left in its normal environment.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"cell fate commitment involved in pattern specification","termid":"GO:0060581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate specification involved in pattern specification","termid":"GO:0060573"}


id: GO:0106435
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a carboxylic ester + H2O = a carboxylate + an alcohol + H+.","definition_xrefs":["RHEA:21164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"carboxylesterase activity","secondary_identifiers":["MetaCyc:CARBOXYLESTERASE-RXN","Reactome:R-HSA-9619024","EC:3.1.1.1","Reactome:R-HSA-9749647","Reactome:R-HSA-9727567"],"synonyms":[{"name":"B-esterase activity","type":"narrow"},{"name":"ali-esterase activity","type":"related"},{"name":"alpha-carboxylesterase activity","type":"narrow"},{"name":"cocaine esterase","type":"narrow"},{"name":"nonspecific carboxylesterase activity","type":"related"},{"name":"procaine esterase","type":"narrow"},{"name":"serine esterase activity","type":"narrow"},{"name":"triacetin esterase","type":"narrow"},{"name":"vitamin A esterase","type":"narrow"}],"termid":"GO:0106435"}


id: PBO:0012240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal-ubiquitin fusion protein Ubi5 (predicted)","termid":"PBO:0012240"}


id: MONDO:0019178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The association of auricular abnormalities and cleft lip with or without cleft palate has been described in two siblings. One sibling had postauricular pits, profound myopia, nystagmus and retinal pigment abnormalities. The second sibling was a fetus (gestational age: 23 weeks) with severe cleft lip, cleft palate and external ear abnormalities.","definition_xrefs":["Orphanet:77300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auricular abnormalities-cleft lip with or without cleft palate-ocular abnormalities syndrome","secondary_identifiers":["MEDGEN:1378358","UMLS:C4518478","GARD:18933"],"termid":"MONDO:0019178","xrefs":{"Monarch":{"xref_id":"0019178"}}}


id: GO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["PMID:11426647","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046426"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042527","GO:0042512","GO:0042514","GO:0042530","GO:0042518","GO:0042524","GO:0042521"],"synonyms":[{"name":"down regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"downregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042532"}


id: GO:0021767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary body over time from its initial formation until its mature state. The mammillary body is a protrusion at the posterior end of the hypothalamus that contains hypothalamic nuclei.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","GOC:dgh","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary body development","termid":"GO:0021767"}


id: PR:Q10321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- shg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component shg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.09","synonyms":[{"name":"COMPASS component shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-shg1","type":"exact"},{"name":"complex proteins associated with set1 protein shg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10321"}


id: GO:0045978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of nucleoside metabolic process","synonyms":[{"name":"down regulation of nucleoside metabolic process","type":"exact"},{"name":"down-regulation of nucleoside metabolic process","type":"exact"},{"name":"downregulation of nucleoside metabolic process","type":"exact"},{"name":"inhibition of nucleoside metabolic process","type":"narrow"},{"name":"negative regulation of nucleoside metabolism","type":"exact"}],"termid":"GO:0045978"}


id: GO:0005775
data:
  {"annotated_genes":["SJAG_01088","SJAG_03586","SJAG_03976","SJAG_04785","SJAG_00181","SJAG_02100","SJAG_00132","SJAG_03022","SJAG_02432","SJAG_01407","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113610,116150,106076,94255,114475,114747,101981,97959,87816,71028,98169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000328"}]},"cv_name":"cellular_component","definition":"The volume enclosed within the vacuolar membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00132":null,"SJAG_00181":null,"SJAG_01088":null,"SJAG_01407":null,"SJAG_02100":null,"SJAG_02432":null,"SJAG_03022":null,"SJAG_03586":null,"SJAG_03608":null,"SJAG_03976":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"vacuolar lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005775","terms_by_termid":{"GO:0000328":null}}


id: PBO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 5","termid":"PBO:0050970"}


id: PBO:0056986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR30D and MIR30B host gene","termid":"PBO:0056986"}


id: PBO:0086715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutation results in impaired mitochondrial respiration","termid":"PBO:0086715"}


id: PBO:0041715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 6","termid":"PBO:0041715"}


id: PBO:0057869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-2","termid":"PBO:0057869"}


id: GO:0052662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-zeaxanthin + 4 H+ + 2 O2 + 4 reduced [2Fe-2S]-[ferredoxin] = all-trans-violaxanthin + 2 H2O + 4 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:32443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"zeaxanthin epoxidase activity","secondary_identifiers":["KEGG_REACTION:R10070","GO:0009540","MetaCyc:RXN-13193","GO:0052663","EC:1.14.15.21"],"synonyms":[{"name":"antheraxanthin epoxidase activity","type":"narrow"},{"name":"zea-epoxidase activity","type":"related"},{"name":"zeaxanthin epoxidase [overall] activity","type":"related"}],"termid":"GO:0052662"}


id: PBO:0060024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 12","termid":"PBO:0060024"}


id: GO:0140404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host innate immune response by symbiont","synonyms":[{"name":"effector mediated modulation of host immune response by symbiont","type":"exact"},{"name":"effector triggered modulation of host immune response by symbiont","type":"exact"},{"name":"effector-dependent modulation of host immune response by symbiont","type":"exact"},{"name":"effector-mediated modulation of host immunity","type":"exact"},{"name":"effector-mediated modulation of host innate immune response by symbiont","type":"exact"},{"name":"effector-triggered modulation of host immune response by symbiont","type":"exact"}],"termid":"GO:0140404"}


id: FYPO:0000093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an arsenic-containing substance. Cells stop growing (and may die) at a concentration of arsenic that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to arsenic","synonyms":[{"name":"hypersensitive to arsenic","type":"exact"},{"name":"sensitive to arsenic during mitotic cell cycle","type":"related"},{"name":"sensitive to arsenic during vegetative growth","type":"exact"},{"name":"sensitive to arsenic molecular entity","type":"exact"},{"name":"sensitive to arsenic-containing substance","type":"exact"}],"termid":"FYPO:0000093"}


id: PBO:0042435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 42","termid":"PBO:0042435"}


id: PATO:0001054
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex angle that is inside two adjacent sides of a polygon.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex angle to","termid":"PATO:0001053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal angle","termid":"PATO:0001054"}


id: GO:0021796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in the creation of areas within the cerebral cortex that will direct the behavior of cell migration and differentiation as the cortex develops.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"telencephalon regionalization","termid":"GO:0021978"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex regionalization","synonyms":[{"name":"cerebral cortex arealization","type":"exact"},{"name":"cerebral cortex pattern biosynthesis","type":"exact"},{"name":"cerebral cortex pattern formation","type":"exact"}],"termid":"GO:0021796"}


id: PBO:0045370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 5","termid":"PBO:0045370"}


id: MONDO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"entropion","termid":"MONDO:0001519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile entropion","secondary_identifiers":["MEDGEN:509837","SCTID:55408009","UMLS:C0155188","ICD9:374.01","DOID:12836"],"synonyms":[{"name":"involutional entropion","type":"exact"}],"termid":"MONDO:0001591","xrefs":{"Monarch":{"xref_id":"0001591"}}}


id: PBO:0048156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 2","termid":"PBO:0048156"}


id: PBO:0091752
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kre9(Nine) Homolog","termid":"PBO:0091752"}


id: SO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An A box within an RNA polymerase III type 1 promoter.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"A_box","termid":"SO:0000619"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_1","termid":"SO:0000617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box_type_1","synonyms":[{"name":"A box type 1","type":"related"}],"termid":"SO:0001675"}


id: PBO:0043455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin and CBS domain divalent metal cation transport mediator 1","termid":"PBO:0043455"}


id: MONDO:0021464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the caecum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign colon neoplasm","termid":"MONDO:0002278"},{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of cecum","secondary_identifiers":["NCIT:C4772","UMLS:C0496859","MEDGEN:105420","ICD10CM:D12.0","SCTID:92040001"],"synonyms":[{"name":"benign cecum neoplasm","type":"exact"},{"name":"benign cecum tumor","type":"exact"},{"name":"benign cecum tumour","type":"exact"},{"name":"benign neoplasm of the cecum","type":"exact"},{"name":"benign tumor of cecum","type":"exact"},{"name":"benign tumor of the cecum","type":"exact"},{"name":"benign tumour of cecum","type":"exact"},{"name":"benign tumour of the cecum","type":"exact"},{"name":"caecum benign neoplasm","type":"exact"}],"termid":"MONDO:0021464","xrefs":{"Monarch":{"xref_id":"0021464"}}}


id: PBO:0052022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 2","termid":"PBO:0052022"}


id: FYECO:0000266
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose (typically <2% w/v), salts, water and with xanthine as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, xanthine nitrogen source","termid":"FYECO:0000266"}


id: SO:1000056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation affects the amino acid coding sequence of a gene; this region includes both the initiator and terminator codons.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000056 sequence_variant_causing_amino_acid_coding_codon_change_in_transcript (obsolete SO:1000056)","synonyms":[{"name":"mutaton causing amino acid coding codon change in transcript","type":"related"},{"name":"sequence variant causing amino acid coding codon change in transcript","type":"exact"}],"termid":"SO:1000056"}


id: PBO:0048511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 15","termid":"PBO:0048511"}


id: MONDO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the WFS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset nuclear cataract","termid":"MONDO:0020376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 41","secondary_identifiers":["OMIM:116400","GARD:18234","MEDGEN:811742","DOID:0110241","UMLS:C3805412"],"synonyms":[{"name":"CTRCT41","type":"exact"},{"name":"WFS1 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 41","type":"exact"},{"name":"cataract 41, congenital nuclear type","type":"related"},{"name":"cataract type 41","type":"exact"},{"name":"congenital nuclear type cataract 41","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in WFS1","type":"exact"}],"termid":"MONDO:0007287","xrefs":{"Monarch":{"xref_id":"0007287"}}}


id: PR:Q9UT05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tripeptidyl-peptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02216","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripeptidyl-peptidase 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.12c","secondary_identifiers":["UniProtKB:Q9UT05"],"synonyms":[{"name":"Spom972h-TPP2","type":"exact"},{"name":"TPP-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"multicorn protease (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT05"}


id: PBO:0091575
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by mouse HUS1","termid":"PBO:0091575"}


id: MONDO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"focal palmoplantar keratoderma","termid":"MONDO:0017672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal palmoplantar keratoderma with joint keratoses","secondary_identifiers":["GARD:17596","Orphanet:370002","UMLS:C4755302","MEDGEN:1667811"],"termid":"MONDO:0018252","xrefs":{"Monarch":{"xref_id":"0018252"}}}


id: PBO:0064021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 55","termid":"PBO:0064021"}


id: PBO:0085438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A+) RNA-binding protein; key surveillance factor for the selective export of spliced mRNAs from the nucleus to the cytoplasm; preference for intron-containing genes; similar to Npl3p; HRB1 has a paralog, GBP2, that arose from the whole genome duplication","termid":"PBO:0085438"}


id: GO:0008581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of the Gly76-Lys48 isopeptide bond of polyubiquitin.","definition_xrefs":["ISBN:0120793709","MEROPS:c19p001"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-specific protease 5 activity (obsolete GO:0008581)","synonyms":[{"name":"ubiquitin isopeptidase T activity","type":"exact"},{"name":"ubiquitin-specific protease 5 activity","type":"exact"}],"termid":"GO:0008581"}


id: GO:0006216
data:
  {"annotated_genes":["SJAG_03771","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70176,70274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009972"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidine metabolic process","termid":"GO:0046087"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside catabolic process","termid":"GO:0046133"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01673":null,"SJAG_03771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"cytidine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"cytidine breakdown","type":"exact"},{"name":"cytidine catabolism","type":"exact"},{"name":"cytidine degradation","type":"exact"}],"termid":"GO:0006216","terms_by_termid":{"GO:0009972":null}}


id: SO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence from the end of a PAC clone that may provide a highly specific marker.","definition_xrefs":["ZFIN:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"PAC","termid":"SO:0000154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC_end","synonyms":[{"name":"PAC end","type":"exact"}],"termid":"SO:0001480"}


id: PBO:0042091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 160","termid":"PBO:0042091"}


id: GO:0140979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleotides within a cell.","definition_xrefs":["PMID:34880500","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleotide homeostasis","termid":"GO:0140979"}


id: PBO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein vacuolar sorting signal","termid":"PBO:0002342"}


id: PBO:0079773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose ceramide glucosyltransferase","termid":"PBO:0079773"}


id: PBO:0004281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin family protein (predicted)","termid":"PBO:0004281"}


id: SO:0000240
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deviation in chromosome structure or number.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"part_of","term_name":"chromosomally_aberrant_genome","termid":"SO:0001524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_variation","synonyms":[{"name":"chromosome variation","type":"exact"}],"termid":"SO:0000240"}


id: GO:0039704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral translation initiation mechanism where ribosomes are loaded onto viral mRNA at the 5'-cap structure and start scanning for a short distance before by-passing the large internal leader region and initiating at a downstream start site.","definition_xrefs":["PMID:18195037","VZ:608","PMID:15827182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational shunt","synonyms":[{"name":"ribosomal shunt initiation pathway","type":"exact"}],"termid":"GO:0039704"}


id: MONDO:1010429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"atherosclerosis, non-human animal","termid":"MONDO:1010008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis, Japanese quail","secondary_identifiers":["OMIA:000080-93934"],"termid":"MONDO:1010429","xrefs":{"Monarch":{"xref_id":"1010429"}}}


id: GO:0097625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have a pH above 7. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity basic amino acid transmembrane transporter activity","synonyms":[{"name":"low affinity basic amino acid transmembrane transporter activity","type":"exact"}],"termid":"GO:0097625"}


id: MONDO:0018880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare teratologic disease (obsolete MONDO:0018880)","secondary_identifiers":["Orphanet:52662"],"synonyms":[{"name":"acquired embryofetopathy","type":"exact"}],"termid":"MONDO:0018880","xrefs":{"Monarch":{"xref_id":"0018880"}}}


id: PBO:0032714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis","termid":"PBO:0032714"}


id: FYPO:0007499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more cohesin-associated regions (CARs) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PMID:27226485","PMID:31895039","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"increased chromatin binding at cohesin associated regions","synonyms":[{"name":"increased chromatin binding at CARs","type":"exact"},{"name":"increased chromatin binding at cohesin associated regions during mitotic cell cycle","type":"related"},{"name":"increased chromatin binding at cohesin associated regions during vegetative growth","type":"exact"}],"termid":"FYPO:0007499"}


id: PBO:0003175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine O-acetyltransferase (predicted)","termid":"PBO:0003175"}


id: PBO:0059334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 4","termid":"PBO:0059334"}


id: PBO:0049831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 2","termid":"PBO:0049831"}


id: GO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses fatty-acyl-CoA synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"fatty-acyl-CoA synthase complex","synonyms":[{"name":"fatty acyl CoA synthase complex","type":"exact"}],"termid":"GO:0005836"}


id: PBO:0053880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1159","termid":"PBO:0053880"}


id: MONDO:0859277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with muscle tone abnormalities and distal skeletal defects","secondary_identifiers":["UMLS:C5774199","MEDGEN:1823972","OMIM:620007"],"termid":"MONDO:0859277","xrefs":{"Monarch":{"xref_id":"0859277"}}}


id: PBO:0027126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_heat_shock_gene_mRNA_during_vegetative_growth","termid":"PBO:0027126"}


id: PBO:0004701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B (predicted)","termid":"PBO:0004701"}


id: FYPO:0008054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homocitrate synthase is increased, due to the absence of lysine inhibition.","definition_xrefs":["PMID:20089861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased homocitrate synthase inhibition by L-lysine","synonyms":[{"name":"feedback inhibition insensitive","type":"broad"}],"termid":"FYPO:0008054"}


id: PBO:0051910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha V","termid":"PBO:0051910"}


id: PBO:0080007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene 2","termid":"PBO:0080007"}


id: SO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a chromosomal insertion,.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_attribute","synonyms":[{"name":"insertion attribute","type":"exact"}],"termid":"SO:0001512"}


id: MOD:00667
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a decanoyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"decanoylated residue","synonyms":[{"name":"DecRes","type":"exact"}],"termid":"MOD:00667"}


id: PBO:0049086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 141B, pseudogene","termid":"PBO:0049086"}


id: GO:2000794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epithelial cell proliferation involved in lung morphogenesis.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:2000794"}


id: GO:1902640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propan-2-ol.","definition_xrefs":["PMID:16346237","GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propan-2-ol metabolic process","termid":"GO:1902639"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"propan-2-ol biosynthetic process","synonyms":[{"name":"Isopropanol biosynthetic process","type":"exact"},{"name":"Isopropyl alcohol biosynthetic process","type":"exact"},{"name":"propan-2-ol anabolism","type":"exact"},{"name":"propan-2-ol biosynthesis","type":"exact"},{"name":"propan-2-ol formation","type":"exact"},{"name":"propan-2-ol synthesis","type":"exact"}],"termid":"GO:1902640"}


id: PBO:0079612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 I","termid":"PBO:0079612"}


id: PBO:0061617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 3","termid":"PBO:0061617"}


id: PBO:0027396
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_diacylglycerol_O-acyltransferase_activity","termid":"PBO:0027396"}


id: GO:2000232
data:
  {"annotated_genes":["SJAG_01764","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75780,78312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000234"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01764":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000232","terms_by_termid":{"GO:2000234":null}}


id: PBO:0065514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein prenyltransferase alpha subunit repeat containing 1","termid":"PBO:0065514"}


id: PBO:0066449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 1, pseudogene","termid":"PBO:0066449"}


id: GO:0009588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons from UV-A or blue light into a molecular signal; the UV-A, blue light range is defined as having a wavelength within the range of 315 to 400 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phototransduction","termid":"GO:0007602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"UV-A, blue light phototransduction","synonyms":[{"name":"blue-sensitive opsin","type":"related"},{"name":"short-wave-sensitive opsin","type":"related"},{"name":"violet-sensitive opsin","type":"related"}],"termid":"GO:0009588"}


id: PBO:0027084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0027084"}


id: PBO:0084322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and import of histones H3 and H4; localizes to the nuclear pore, nucleus, and cytoplasm; exhibits genetic interactions with RAI1","termid":"PBO:0084322"}


id: PBO:0017492
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_inferred","termid":"PBO:0017492"}


id: PATO:0001165
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001165 urine enzyme composition value (obsolete PATO:0001165)","termid":"PATO:0001165"}


id: FYPO:0006508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the telomere is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal telomere maintenance","termid":"FYPO:0007415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0000641"],"is_obsolete":false,"name":"abnormal telomere morphology","termid":"FYPO:0006508"}


id: GO:0034653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"fat-soluble vitamin catabolic process","termid":"GO:0042363"},{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"retinoic acid catabolic process","synonyms":[{"name":"retinoic acid breakdown","type":"exact"},{"name":"retinoic acid catabolism","type":"exact"},{"name":"retinoic acid degradation","type":"exact"},{"name":"vitamin A1 acid catabolic process","type":"exact"}],"termid":"GO:0034653"}


id: FYPO:0000140
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K 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id: GO:0042267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a natural killer cell through the release of granules containing cytotoxic mediators or through the engagement of death receptors.","definition_xrefs":["GOC:pr","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"},{"relation_name":"is_a","term_name":"natural killer cell mediated immunity","termid":"GO:0002228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated cytotoxicity","synonyms":[{"name":"NK cell mediated cell death","type":"exact"},{"name":"NK cell mediated cell killing","type":"exact"},{"name":"NK cell mediated cytolysis","type":"related"},{"name":"NK cell mediated cytotoxicity","type":"exact"},{"name":"killer activity","type":"related"},{"name":"natural killer cell mediated cell death","type":"exact"},{"name":"natural killer cell mediated cell killing","type":"exact"},{"name":"natural killer cell mediated cytolysis","type":"related"},{"name":"natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042267"}


id: MONDO:1012365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Laron dwarfism, non-human animal","termid":"MONDO:1011958"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laron dwarfism, cattle","secondary_identifiers":["OMIA:001323-9913"],"termid":"MONDO:1012365","xrefs":{"Monarch":{"xref_id":"1012365"}}}


id: FYPO:0006235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal level of macromolecular complex","synonyms":[{"name":"normal level of macromolecular complex during mitotic cell cycle","type":"related"},{"name":"normal level of macromolecular complex during vegetative growth","type":"exact"}],"termid":"FYPO:0006235"}


id: PBO:0029987
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_glycosylation","termid":"PBO:0029987"}


id: GO:0050939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early stripe melanocyte differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanocyte differentiation","termid":"GO:0045634"},{"relation_name":"regulates","term_name":"early stripe melanocyte differentiation","termid":"GO:0050933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of early stripe melanocyte differentiation","synonyms":[{"name":"regulation of early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050939"}


id: GO:0018995
data:
  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"Any cellular component of a host cell. The host is an organism in which another organism, for instance a parasite or symbiont, spends part or all of its life cycle and from which it obtains nourishment and/or protection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cellular component","references_by_uniquename":{"PMID:30726171":null},"secondary_identifiers":["Wikipedia:Host_(biology)"],"synonyms":[{"name":"host organism","type":"exact"}],"termid":"GO:0018995","terms_by_termid":{"GO:0085039":null}}


id: PR:Q9UR21
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UR21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.14","synonyms":[{"name":"Spom972h-SPAC24B11.14","type":"exact"}],"termid":"PR:Q9UR21"}


id: FYPO:0007705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is normal (i.e. indistinguishable from wild type) when the cell is subject to glucose starvation.","definition_xrefs":["PMID:26443240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to lateral cell cortex during glucose starvation","synonyms":[{"name":"normal protein localisation to lateral cell cortex during glucose starvation","type":"exact"},{"name":"normal protein localization to cell side during glucose starvation","type":"related"},{"name":"normal protein localization to lateral cell cortex during cellular response to glucose starvation","type":"exact"},{"name":"normal protein localization to lateral cell cortex during glucose depletion","type":"exact"},{"name":"normal protein localization to lateral cell cortex during glucose deprivation","type":"exact"},{"name":"normal protein localization to lateral cortex during glucose starvation","type":"exact"}],"termid":"FYPO:0007705"}


id: GO:0008786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-allose-6-phosphate = D-allulose-6-phosphate.","definition_xrefs":["RHEA:28430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"D-allose 6-phosphate isomerase activity","secondary_identifiers":["MetaCyc:RXN0-303"],"synonyms":[{"name":"allose 6-phosphate isomerase activity","type":"narrow"}],"termid":"GO:0008786"}


id: PBO:0079458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 7","termid":"PBO:0079458"}


id: MONDO:0033548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, congenital, with diaphragmatic defects, respiratory insufficiency, and dysmorphic facies","secondary_identifiers":["MEDGEN:1764743","DOID:0081349","UMLS:C5436530","OMIM:618975"],"synonyms":[{"name":"MYODRIF","type":"related"},{"name":"MYOPATHY, CONGENITAL, WITH DIAPHRAGMATIC DEFECTS, RESPIRATORY INSUFFICIENCY, AND DYSMORPHIC FACIES","type":"related"},{"name":"Myopathy, Congenital, Due to Myod1 Deficiency","type":"related"}],"termid":"MONDO:0033548","xrefs":{"Monarch":{"xref_id":"0033548"}}}


id: PBO:0045799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin 3","termid":"PBO:0045799"}


id: MONDO:0019926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X small rings is a rare chromosome X structural anomaly, with highly variable phenotype, principally characterized by developmental delay, intellectual disability, short stature, craniofacial dysmorphism (incl. microcephaly, facial asymmetry, hypertelorism, long palpebral fissures, epicanthus, low-set or malrotated ears, broad nose with a flat nasal bridge, anteverted nares, long philtrum, thin upper lip, high arched palate, micrognathia) and skeletal anomalies (e.g. cubitus valgus, talipes equinovarus). Patients may also present heart malformations (e.g. ventricular septal defects, mitral valve stenosis), sacral dimple, soft tissue syndactyly, pigmented nevi, and seizures.","definition_xrefs":["Orphanet:96201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"X small rings","secondary_identifiers":["GARD:19345","UMLS:C4707824","MEDGEN:1641475","SCTID:766760004"],"termid":"MONDO:0019926","xrefs":{"Monarch":{"xref_id":"0019926"}}}


id: GO:1901086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzylpenicillin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00149","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"benzylpenicillin metabolic process","synonyms":[{"name":"benzylpenicillin metabolism","type":"exact"},{"name":"penicillin G metabolism","type":"exact"}],"termid":"GO:1901086"}


id: PBO:0041516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 48","termid":"PBO:0041516"}


id: GO:0098845
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An endosomal compartment that is part of the post-synapse. Only early and recycling endosomes are typically present in the postsynapse.","definition_xrefs":["PMID:20820847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"postsynaptic endosome","termid":"GO:0098845"}


id: PBO:0045496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 1","termid":"PBO:0045496"}


id: PBO:0043414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy associated 5","termid":"PBO:0043414"}


id: PBO:0059615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 27","termid":"PBO:0059615"}


id: GO:0022849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when glutamate has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate-gated receptor activity","termid":"GO:0004970"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"glutamate-gated calcium ion channel activity","termid":"GO:0022849"}


id: GO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation by the lectin pathway.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, lectin pathway","termid":"GO:0001868"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation, lectin pathway","synonyms":[{"name":"activation of complement activation, lectin pathway","type":"narrow"},{"name":"positive regulation of complement cascade, lectin pathway","type":"exact"},{"name":"stimulation of complement activation, lectin pathway","type":"narrow"},{"name":"up regulation of complement activation, lectin pathway","type":"exact"},{"name":"up-regulation of complement activation, lectin pathway","type":"exact"},{"name":"upregulation of complement activation, lectin pathway","type":"exact"}],"termid":"GO:0001870"}


id: GO:1900713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"regulation of violaceol I biosynthetic process","synonyms":[{"name":"regulation of violaceol I anabolism","type":"exact"},{"name":"regulation of violaceol I biosynthesis","type":"exact"},{"name":"regulation of violaceol I formation","type":"exact"},{"name":"regulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900713"}


id: MONDO:0002440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that is caused by excess erythropoietin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired secondary polycythemia","termid":"MONDO:0016541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"erythropoietin polycythemia","secondary_identifiers":["DOID:2839","MEDGEN:98214","NCIT:C35434","UMLS:C0391869","SCTID:367328005"],"synonyms":[{"name":"nephrogenous polycythemia","type":"exact"},{"name":"polycythaemia due to Excess erythropoetin production","type":"exact"},{"name":"polycythemia due to excess erythopoetin production","type":"exact"},{"name":"polycythemia, nephrogenous","type":"exact"},{"name":"secondary polycythemia with excess erythropoietin","type":"exact"}],"termid":"MONDO:0002440","xrefs":{"Monarch":{"xref_id":"0002440"}}}


id: GO:0043248
data:
  {"annotated_genes":["SJAG_04197","SJAG_00954","SJAG_01652","SJAG_04844","SJAG_04290","SJAG_04602","SJAG_02570","SJAG_00126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57408,58317,59559,62620,104659],"is_not":false,"summary":null,"term":"GO:0043248"},{"annotations":[116036,80374,99810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome complex.","definition_xrefs":["GOC:go_curators","PMID:10872471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00954":null,"SJAG_01652":null,"SJAG_02570":null,"SJAG_04197":null,"SJAG_04290":null,"SJAG_04602":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"proteasome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9907900"],"synonyms":[{"name":"26S proteasome assembly","type":"narrow"},{"name":"proteasome complex assembly","type":"exact"},{"name":"proteasome maturation","type":"exact"}],"termid":"GO:0043248","terms_by_termid":{"GO:0043248":null,"GO:0070682":null}}


id: PBO:0087748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO complex; THO is a nuclear complex comprised of Hpr1p, Mft1p, Rlr1p, and Thp2p, that is involved in transcription elongation and mitotic recombination; involved in telomere maintenance","termid":"PBO:0087748"}


id: MONDO:1012910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in white-tufted-ear marmoset due to a mutation in the ATXN3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinocerebellar ataxia, ATXN3-related, white-tufted-ear marmoset","secondary_identifiers":["OMIA:002473-9483"],"synonyms":[{"name":"ataxia, spinocerebellar, ATXN3-related, white-tufted-ear marmoset","type":"exact"}],"termid":"MONDO:1012910","xrefs":{"Monarch":{"xref_id":"1012910"}}}


id: PBO:0085727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the nonsense-mediated mRNA decay (NMD) pathway; interacts with Nam7p and Upf3p; involved in telomere maintenance","termid":"PBO:0085727"}


id: FYPO:0008049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}


id: PBO:0076223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene 2","termid":"PBO:0076223"}


id: GO:0014738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hyperplasia.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hyperplasia","termid":"GO:0014738"}


id: MONDO:0016379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erosive pustular dermatosis of the scalp is a rare chronic inflammation of the scalp usually occurring in elderly women (>70 years old) and characterized by the development of painful pustules, shallow erosions, and crusting on atrophic skin that eventually result in cicatricial alopecia.","definition_xrefs":["Orphanet:222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erosive pustular dermatosis of the scalp","secondary_identifiers":["MEDGEN:96057","icd11.foundation:982719772","GARD:2188","SCTID:238733003","UMLS:C0406464"],"termid":"MONDO:0016379","xrefs":{"Monarch":{"xref_id":"0016379"}}}


id: PBO:0090969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding and 3'-end processing protein Seb1","termid":"PBO:0090969"}


id: PBO:0034612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_periphery","termid":"PBO:0034612"}


id: PBO:0026732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_mitotic_metaphase","termid":"PBO:0026732"}


id: PBO:0049213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit associated protein 1","termid":"PBO:0049213"}


id: PBO:0027281
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_at_M26_site","termid":"PBO:0027281"}


id: PBO:0081234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 19","termid":"PBO:0081234"}


id: PBO:0005500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jmj4 protein (predicted)","termid":"PBO:0005500"}


id: GO:0140576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ascorbate at the level of a cell.","definition_xrefs":["PMID:17068337","PMID:32547589","PMID:1623014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascorbate homeostasis","synonyms":[{"name":"cellular ascorbate homeostasis","type":"narrow"}],"termid":"GO:0140576"}


id: GO:1902260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GOC:rl","PMID:11299204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of delayed rectifier potassium channel activity","termid":"GO:1902259"},{"relation_name":"is_a","term_name":"negative regulation of voltage-gated potassium channel activity","termid":"GO:1903817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of delayed rectifier potassium channel activity","synonyms":[{"name":"down regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"down-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"downregulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"inhibition of delayed rectifier potassium channel activity","type":"narrow"}],"termid":"GO:1902260"}


id: PBO:0088138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar proteinase B (yscB) with H3 N-terminal endopeptidase activity; serine protease of the subtilisin family; involved in protein degradation in the vacuole and required for full protein degradation during sporulation; activity inhibited by Pbi2p; protein abundance increases in response to DNA replication stress; PRB1 has a paralog, YSP3, that arose from the whole genome duplication","termid":"PBO:0088138"}


id: MONDO:0958238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperemesis gravidarum, susceptibility to","secondary_identifiers":["UMLS:C5889860","MEDGEN:1857498","OMIM:620730"],"termid":"MONDO:0958238","xrefs":{"Monarch":{"xref_id":"0958238"}}}


id: FYPO:0009039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of potassium chloride than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to potassium chloride","synonyms":[{"name":"resistance to potassium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride during vegetative growth","type":"exact"},{"name":"resistant to potassium chloride","type":"exact"}],"termid":"FYPO:0009039"}


id: PBO:0042816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 5","termid":"PBO:0042816"}


id: PBO:0059926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 12","termid":"PBO:0059926"}


id: GO:0060241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of lysozyme.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"negatively_regulates","term_name":"lysozyme activity","termid":"GO:0003796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016798"},{"rel_name":"negatively_regulates","termid":"GO:0003824"},{"rel_name":"negatively_regulates","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"negatively_regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0016787","GO:0004857","GO:0016798","GO:0140678","GO:0003824","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"lysozyme inhibitor activity","termid":"GO:0060241"}


id: PBO:0046004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1B","termid":"PBO:0046004"}


id: FYPO:0007902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic cytokinesis begins at the same time as normal.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytokinesis","termid":"FYPO:0001367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal onset of cytokinesis","termid":"FYPO:0007902"}


id: GO:0061289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the kidney over time.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in kidney development (obsolete GO:0061289)","synonyms":[{"name":"Wnt receptor signaling pathway involved in kidney development","type":"exact"},{"name":"Wnt receptor signalling pathway involved in kidney development","type":"exact"},{"name":"Wnt-activated signaling pathway involved in kidney development","type":"exact"}],"termid":"GO:0061289"}


id: GO:0038199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with ethylene and transmitting the signal in the cell to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:22467798","PMID:24012247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"ethylene receptor activity","synonyms":[{"name":"C2H4 receptor activity","type":"exact"},{"name":"ethylene response sensor","type":"related"}],"termid":"GO:0038199"}


id: PBO:0054830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2243","termid":"PBO:0054830"}


id: MONDO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 52","secondary_identifiers":["OMIM:619202","UMLS:C5543094","MEDGEN:1785685","GARD:16436","DOID:0112270"],"synonyms":[{"name":"SPGF52","type":"exact"},{"name":"spermatogenic failure 52","type":"exact"}],"termid":"MONDO:0030938","xrefs":{"Monarch":{"xref_id":"0030938"}}}


id: PBO:0084327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ketopantoate hydroxymethyltransferase; required for pantothenic acid biosynthesis, converts 2-oxoisovalerate into 2-dehydropantoate","termid":"PBO:0084327"}


id: PBO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 7","termid":"PBO:0072069"}


id: PBO:0089525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex ATPase subunit Brr2","termid":"PBO:0089525"}


id: PBO:0050333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 35","termid":"PBO:0050333"}


id: GO:0051999
data:
  {"annotated_genes":["SJAG_02168","SJAG_03953","SJAG_05311","SJAG_04878","SJAG_04913"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75866,79716,92145,95587,112842],"is_not":false,"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannosyl-inositol phosphorylceramide, any lipid with a phosphodiester bridge between an inositol residue and the ceramide group which contains a phosphoryl (-P(O)=) groups and a mannose derivative.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyl-inositol phosphorylceramide metabolic process","termid":"GO:0006675"},{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02168":null,"SJAG_03953":null,"SJAG_04878":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"mannosyl-inositol phosphorylceramide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MIPC biosynthetic process","type":"exact"},{"name":"mannose inositol phosphoceramide biosynthetic process","type":"exact"},{"name":"mannose-inositol-P-ceramide (MIPC) biosynthetic process","type":"exact"},{"name":"mannosyl-inositol phosphorylceramide anabolism","type":"exact"},{"name":"mannosyl-inositol phosphorylceramide biosynthesis","type":"exact"},{"name":"mannosyl-inositol phosphorylceramide formation","type":"exact"},{"name":"mannosyl-inositol phosphorylceramide synthesis","type":"exact"}],"termid":"GO:0051999","terms_by_termid":{"GO:0051999":null}}


id: MOD:01037
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two hydrogen atoms of an L-tyrosine residue with two chlorine atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated tyrosine","termid":"MOD:00987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dichlorinated tyrosine","synonyms":[{"name":"Cl2Tyr","type":"exact"}],"termid":"MOD:01037"}


id: PBO:0060588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBR1 autophagy cargo receptor","termid":"PBO:0060588"}


id: GO:0102138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: O2 + reduced [NADPH--hemoprotein reductase] + typhasterol = 7-oxatyphasterol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-oxatyphasterol synthase activity (obsolete GO:0102138)","termid":"GO:0102138"}


id: PBO:0047204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 218 member B, pseudogene","termid":"PBO:0047204"}


id: FYPO:0006566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable under conditions of sulfur starvation.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal viability upon sulfur starvation","synonyms":[{"name":"normal cell population viability upon sulfur starvation","type":"exact"},{"name":"normal viability upon sulphur starvation","type":"exact"}],"termid":"FYPO:0006566"}


id: MOD:00511
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, HexNAc(2)","definition_xrefs":["PubMed:111247","PubMed:1694179","PubMed:5490222","RESID:AA0151#var","Unimod:143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)","type":"related"},{"name":"HexNAc2","type":"related"}],"termid":"MOD:00511"}


id: PBO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 66","termid":"PBO:0048355"}


id: GO:0000033
data:
  {"annotated_genes":["SJAG_04952","SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052925"},{"annotations":[60910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004378"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["GOC:mcc","PMID:10521541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03056":null,"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"alpha-1,3-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-4720473","Reactome:R-HSA-4549368","Reactome:R-HSA-446188","Reactome:R-HSA-446208"],"termid":"GO:0000033","terms_by_termid":{"GO:0004378":null,"GO:0052925":null}}


id: MONDO:1012050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"chronic interstitial nephropathy, non-human animal","termid":"MONDO:1011904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic interstitial nephropathy, ducks","secondary_identifiers":["OMIA:000192-8835"],"termid":"MONDO:1012050","xrefs":{"Monarch":{"xref_id":"1012050"}}}


id: GO:0071317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an isoquinoline alkaloid stimulus. An isoquinoline alkaloid is any member of a group of compounds with the heterocyclic ring structure of benzo(c)pyridine which is a structure characteristic of the group of opium alkaloids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to isoquinoline alkaloid","termid":"GO:0014072"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"}


id: GO:0047479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced glutathione + glutathionylspermidine + ATP = trypanothione + ADP + phosphate.","definition_xrefs":["EC:6.3.1.9","MetaCyc:6.3.1.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"trypanothione synthase activity","secondary_identifiers":["RHEA:21532"],"synonyms":[{"name":"TSR synthetase activity","type":"related"},{"name":"glutathionylspermidine:glutathione ligase (ADP-forming)","type":"related"}],"termid":"GO:0047479"}


id: FYPO:0001293
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell wall biogenesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell wall biogenesis","synonyms":[{"name":"normal cell wall biogenesis during mitotic cell cycle","type":"related"},{"name":"normal cell wall biogenesis during vegetative growth","type":"exact"},{"name":"normal fungal-type cell wall biogenesis","type":"exact"}],"termid":"FYPO:0001293"}


id: PBO:0076946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroglobulin","termid":"PBO:0076946"}


id: GO:0070879
data:
  {"annotated_genes":["SJAG_05285","SJAG_04666","SJAG_01288","SJAG_01453","SJAG_03587","SJAG_02192","SJAG_05001","SJAG_01835","SJAG_02222","SJAG_03646","SJAG_04771","SJAG_00876","SJAG_03123","SJAG_00218","SJAG_01171","SJAG_01290","SJAG_04483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95438,102261,102262,108380],"is_not":false,"summary":null,"term":"GO:0070879"},{"annotations":[94800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[73430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[106426,71261,113468,74863,73432,76217,116119,91935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[102958,78609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[87860,92761],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of fungal cells.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall beta-glucan metabolic process","termid":"GO:0034406"},{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide metabolic process","termid":"GO:0071966"},{"relation_name":"part_of","term_name":"fungal-type cell wall biogenesis","termid":"GO:0009272"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044085","GO:0005975","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall beta-glucan metabolism","type":"exact"}],"termid":"GO:0070879","terms_by_termid":{"GO:0034412":null,"GO:0034413":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0070487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 22","termid":"PBO:0070487"}


id: GO:1900034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to heat.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to heat","secondary_identifiers":["Reactome:R-HSA-3371571","Reactome:R-HSA-3371453"],"synonyms":[{"name":"regulation of cellular response to heat stress","type":"exact"}],"termid":"GO:1900034"}


id: FYECO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are initially grown in glucose minimal medium to stationary phase followed by transfer to minimal medium and continued growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth to stationary phase","termid":"FYECO:0000158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to stationary phase in rich medium followed by transfer to minimal medium","termid":"FYECO:0000159"}


id: FYPO:0007697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is decreased.","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA strand exchange inhibitor activity","synonyms":[{"name":"decreased RecA-family recombinase inhibitor activity","type":"exact"},{"name":"decreased negative regulation of RecA-family recombinase activity","type":"related"},{"name":"reduced DNA strand exchange inhibitor activity","type":"exact"}],"termid":"FYPO:0007697"}


id: GO:0003019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The neurological process in which nerve impulses arising in the aorta or the carotid sinuses travel to the medulla and reach the nucleus of tractus solaris.","definition_xrefs":["GOC:mtg_cardio","ISBN:0323031951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","termid":"GO:0001978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system control of baroreceptor feedback","termid":"GO:0003019"}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: MONDO:0013052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KLHL7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 42","secondary_identifiers":["ICD10CM:H35.5","OMIM:612943","UMLS:C2751986","MEDGEN:442864","GARD:15593","DOID:0110386","MESH:C567854"],"synonyms":[{"name":"KLHL7 retinitis pigmentosa","type":"exact"},{"name":"RP42","type":"exact"},{"name":"retinitis pigmentosa 42","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KLHL7","type":"exact"},{"name":"retinitis pigmentosa type 42","type":"exact"}],"termid":"MONDO:0013052","xrefs":{"Monarch":{"xref_id":"0013052"}}}


