# terms

id: PR:000028938
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1-like transcription factor reduced form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-1-like transcription factor","termid":"PR:000027897"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor reduced form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1783.07c","synonyms":[{"name":"Spom-pap1/Red+","type":"exact"}],"termid":"PR:000028938"}


id: MONDO:0017190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic pheochromocytoma/secreting paraganglioma are isolated, non-familial, catecholamin-producing tumors arising from neuroendocrine chromaffin cells in the adrenal medulla or in extra-adrenal chromaffin tissue, respectively. The majority of these tumors are benign and the presenting symptoms are typically caused by the increased catecholamine production of the tumor, including hypertension (often paroxysmal), tachycardia, anxiety and/or excessive sweating.","definition_xrefs":["Orphanet:276621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic pheochromocytoma/secreting paraganglioma","secondary_identifiers":["GARD:7385","MEDGEN:1636854","UMLS:C4707333"],"termid":"MONDO:0017190","xrefs":{"Monarch":{"xref_id":"0017190"}}}


id: GO:0016242
data:
  {"annotated_genes":["SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106969],"is_not":false,"summary":null,"term":"GO:0016242"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of autophagy","termid":"GO:0010507"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"negatively_regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of macroautophagy","type":"exact"},{"name":"down-regulation of macroautophagy","type":"exact"},{"name":"downregulation of macroautophagy","type":"exact"},{"name":"inhibition of macroautophagy","type":"narrow"},{"name":"negative regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016242","terms_by_termid":{"GO:0016242":null}}


id: PBO:0042131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil glutamate rich protein 2","termid":"PBO:0042131"}


id: GO:0043528
data:
  {"annotated_genes":["SJAG_04181","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75781,104452],"is_not":false,"summary":null,"term":"GO:0043528"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNA. In S. cerevisiae, this complex consists of at least two subunits, Trm11p and Trm112p.","definition_xrefs":["PMID:15899842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04181":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m2G10) methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043528","terms_by_termid":{"GO:0043528":null}}


id: PBO:0047267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member B","termid":"PBO:0047267"}


id: MONDO:0700269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the BRCA2 gene. Germline pathogenic or likely pathogenic variants in the BRCA2 gene confer an autosomal dominant predisposition to hereditary breast and ovarian cancer. Tumor formation at other sites, including pancreatic and prostate cancer, have been described.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA2-related cancer predisposition","termid":"MONDO:0700269","xrefs":{"Monarch":{"xref_id":"0700269"}}}


id: PBO:0060905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 6","termid":"PBO:0060905"}


id: MONDO:0015562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 17q is a very rare chromosomal disorder of unknown prevalence characterized by multiple craniofacial (microcephaly and eye, ear, and nose deformities), limb and other multiple organ abnormalities, growth and motor retardation and intellectual deficit. The syndrome is frequently lethal. The deletions include 17(q21.3q23), 17(q21.3q24.2), 17(q23.q24.3) and 17(q23.1q24.2).","definition_xrefs":["Orphanet:1597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 17q","secondary_identifiers":["MEDGEN:895716","SCTID:715365000","GARD:10972","UMLS:C4275171"],"synonyms":[{"name":"17q deletion","type":"related"},{"name":"17q monosomy","type":"related"},{"name":"chromosome 17q deletion","type":"related"},{"name":"deletion 17q","type":"related"},{"name":"distal 17q deletion","type":"exact"},{"name":"distal monosomy type 17q","type":"exact"},{"name":"monosomy 17q","type":"related"},{"name":"monosomy 17qter","type":"exact"},{"name":"partial monosomy 17q","type":"related"},{"name":"telomeric deletion 17q","type":"exact"}],"termid":"MONDO:0015562","xrefs":{"Monarch":{"xref_id":"0015562"}}}


id: MONDO:0011952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 7","secondary_identifiers":["OMIM:608031","MESH:C564300","MEDGEN:334136","UMLS:C1842674","DOID:0060199","GARD:10500"],"synonyms":[{"name":"ALS7","type":"exact"},{"name":"amyotrophic lateral sclerosis 7","type":"exact"}],"termid":"MONDO:0011952","xrefs":{"Monarch":{"xref_id":"0011952"}}}


id: PBO:0081973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRSR2 pseudogene 1","termid":"PBO:0081973"}


id: MONDO:0020576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the blood vessel wall characterized by palpable purpura.","definition_xrefs":["NCIT:C112210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous vasculitis","secondary_identifiers":["UMLS:C0262988","MEDGEN:488809"],"synonyms":[{"name":"cutaneous vasculitis","type":"exact"}],"termid":"MONDO:0020576","xrefs":{"Monarch":{"xref_id":"0020576"}}}


id: GO:0047313
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + an aromatic amino acid = L-glycine + an aromatic oxo acid.","definition_xrefs":["MetaCyc:2.6.1.60-RXN","EC:2.6.1.60"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"aromatic-amino-acid-glyoxylate transaminase activity","secondary_identifiers":["RHEA:10900"],"synonyms":[{"name":"aromatic-amino-acid--glyoxylate aminotransferase activity","type":"related"},{"name":"aromatic-amino-acid-glyoxylate aminotransferase activity","type":"exact"},{"name":"aromatic-amino-acid:glyoxylate aminotransferase activity","type":"related"}],"termid":"GO:0047313"}


id: PBO:0031177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe,_small_cell","termid":"PBO:0031177"}


id: GO:1900205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric nephron tubule development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10","PMID:17314325","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900205"}


id: PBO:0036425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, domain associated with Mpn1 in some fungi","termid":"PBO:0036425"}


id: MONDO:0004877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"transient neonatal neutropenia","termid":"MONDO:0001241"},{"relation_name":"is_a","term_name":"neonatal thrombocytopenia","termid":"MONDO:0024277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"transient neonatal thrombocytopenia","secondary_identifiers":["ICD10CM:P61.0","SCTID:23205009","MEDGEN:472906","DOID:9771","ICD9:776.1","UMLS:C0158991"],"termid":"MONDO:0004877","xrefs":{"Monarch":{"xref_id":"0004877"}}}


id: GO:1901119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tobramycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tobramycin metabolic process","synonyms":[{"name":"tobramycin metabolism","type":"exact"}],"termid":"GO:1901119"}


id: MONDO:0020801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive rectal adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C60640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenocarcinoma","termid":"MONDO:0002169"},{"relation_name":"is_a","term_name":"colorectal medullary carcinoma","termid":"MONDO:0020794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectal medullary carcinoma","secondary_identifiers":["UMLS:C1882915","MEDGEN:364314"],"synonyms":[{"name":"rectal medullary carcinoma","type":"exact"}],"termid":"MONDO:0020801","xrefs":{"Monarch":{"xref_id":"0020801"}}}


id: FYPO:0000232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the actomyosin contractile ring splits upon initiation of contraction during anaphase B, resulting in the formation of a primary ring that undergoes constriction and a secondary ring that does not constrict.","definition_xrefs":["PMID:18272786","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring morphology","termid":"FYPO:0003338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"split actomyosin contractile ring","synonyms":[{"name":"abnormal contractile ring contraction with contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting","type":"related"},{"name":"actomyosin contractile ring splitting upon contraction","type":"related"},{"name":"cytokinesis defects, splitting of the actinomyosin ring","type":"related"},{"name":"split actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"split actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"split cytokinetic contractile ring","type":"exact"},{"name":"split mitotic contractile ring","type":"exact"}],"termid":"FYPO:0000232"}


id: PBO:0048206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit delta","termid":"PBO:0048206"}


id: GO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to papulacandin B","termid":"GO:0072730"}


id: PR:O13996
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized glycosyl hydrolase C27E2.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.01","synonyms":[{"name":"Spom972h-SPAC27E2.01","type":"exact"}],"termid":"PR:O13996"}


id: PBO:0029512
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_vegetative_cell_population_(obsolete_FYPO:0002202)","termid":"PBO:0029512"}


id: MONDO:0019041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic inherited tumor (obsolete MONDO:0019041)","secondary_identifiers":["Orphanet:68336"],"synonyms":[{"name":"rare genetic tumor","type":"related"}],"termid":"MONDO:0019041","xrefs":{"Monarch":{"xref_id":"0019041"}}}


id: MONDO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sandhoff disease is a lysosomal storage disorder from the GM2 gangliosidosis family and is characterized by central nervous system degeneration.","definition_xrefs":["Orphanet:796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"GM2 gangliosidosis","termid":"MONDO:0017720"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002561","MONDO:0005066","MONDO:0005559","MONDO:0002039","MONDO:0005328","MONDO:0002525"],"is_obsolete":false,"name":"Sandhoff disease","secondary_identifiers":["icd11.foundation:708581915","OMIM:268800","NCIT:C85052","GARD:2521","MEDGEN:11313","DOID:3323","MESH:D012497","NORD:1688","SCTID:23849003","NANDO:1200072","UMLS:C0036161","ICD10CM:E75.01","NANDO:2201200"],"synonyms":[{"name":"Beta-hexosaminidase-beta-subunit deficiency","type":"related"},{"name":"GM2 gangliosidosis 0 variant","type":"exact"},{"name":"GM2 gangliosidosis, 0 variant","type":"related"},{"name":"GM2 gangliosidosis, type 2","type":"related"},{"name":"GM2-gangliosidosis, type 2","type":"related"},{"name":"Hexosaminidases A and B deficiency","type":"exact"},{"name":"Hexosaminidases a and B deficiency","type":"related"},{"name":"Sandhoff Jatzkewitz disease","type":"exact"},{"name":"Sandhoff disease","type":"exact"},{"name":"Sandhoff disease, adult type","type":"related"},{"name":"Sandhoff disease, infantile type","type":"related"},{"name":"Sandhoff disease, infantile, juvenile, and adult forms","type":"exact"},{"name":"Sandhoff disease, juvenile type","type":"related"},{"name":"Sandhoff-Jatzkewitz-Pilz disease","type":"related"},{"name":"hexosaminidase A and B deficiency disease","type":"related"},{"name":"total hexosaminidase deficiency","type":"related"}],"termid":"MONDO:0010006","xrefs":{"Monarch":{"xref_id":"0010006"}}}


id: PBO:0029335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_phosphorylation","termid":"PBO:0029335"}


id: GO:0047725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 2,1-beta-D-fructosyl(n) = glucose + 2,1-beta-D-fructosyl(n+1).","definition_xrefs":["EC:2.4.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"inulosucrase activity","secondary_identifiers":["MetaCyc:RXN-15518","RHEA:15745"],"synonyms":[{"name":"sucrose 1-fructosyl transferase activity","type":"related"},{"name":"sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:2,1-beta-D-fructan 1-beta-D-fructosyltransferase activity","type":"related"}],"termid":"GO:0047725"}


id: PBO:0030700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hydrogen_peroxide","termid":"PBO:0030700"}


id: PBO:0110170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitocondrial and tRNA (guanine-N2-)-methyltransferase Trm1","termid":"PBO:0110170"}


id: GO:0009998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"},{"relation_name":"is_a","term_name":"negative regulation of retinal cone cell fate commitment","termid":"GO:0060226"},{"relation_name":"negatively_regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cone cell fate specification","synonyms":[{"name":"down regulation of retinal cone cell fate specification","type":"exact"},{"name":"down-regulation of retinal cone cell fate specification","type":"exact"},{"name":"downregulation of retinal cone cell fate specification","type":"exact"},{"name":"inhibition of retinal cone cell fate specification","type":"narrow"},{"name":"negative regulation of retina cone cell fate specification","type":"exact"},{"name":"suppression of retina cone cell fate","type":"exact"},{"name":"suppression of retinal cone cell fate","type":"exact"}],"termid":"GO:0009998"}


id: GO:1901734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quercetin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00724","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavone biosynthetic process","termid":"GO:0051553"},{"relation_name":"is_a","term_name":"quercetin metabolic process","termid":"GO:1901732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"quercetin biosynthetic process","synonyms":[{"name":"quercetin anabolism","type":"exact"},{"name":"quercetin biosynthesis","type":"exact"},{"name":"quercetin formation","type":"exact"},{"name":"quercetin synthesis","type":"exact"}],"termid":"GO:1901734"}


id: MONDO:0015625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diazoxide-resistant diffuse hyperinsulism (DRDH) is a form of Diazoxide resistant hyperinsulinism characterized by recurrent episodes of profound hypoglycemia caused by an excessive/ uncontrolled insulin secretion (inappropriate for the level of glycemia) due to diffuse involvement of pancreas that is unresponsive to medical treatment with diazoxide, often necessitating near total/total pancreatectomy.","definition_xrefs":["Orphanet:165988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diazoxide-resistant hyperinsulinism","termid":"MONDO:0017186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"diazoxide-resistant diffuse hyperinsulinism","secondary_identifiers":["GARD:20068","MEDGEN:1843355","UMLS:C5679569"],"synonyms":[{"name":"hyperinsulinemic hypoglycemia, diazoxide-resistant diffuse form","type":"exact"}],"termid":"MONDO:0015625","xrefs":{"Monarch":{"xref_id":"0015625"}}}


id: GO:0008922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + holo-[ACP] = a long-chain fatty acyl-[ACP] + AMP + diphosphate. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["EC:6.2.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty acid [acyl-carrier-protein] ligase activity","secondary_identifiers":["GO:0010300","KEGG_REACTION:R07325","MetaCyc:ACYLACPSYNTH-RXN","RHEA:45588"],"synonyms":[{"name":"acyl-ACP synthetase activity","type":"exact"},{"name":"acyl-[acyl-carrier-protein] synthetase activity","type":"related"},{"name":"acyl-acyl carrier protein synthetase","type":"broad"},{"name":"acyl-acyl-carrier-protein synthetase activity","type":"related"},{"name":"acyl-acyl-carrier-proteinsynthetase activity","type":"related"},{"name":"long-chain fatty acid-[acyl-carrier-protein] ligase activity","type":"exact"},{"name":"long-chain-fatty-acid-ACP ligase activity","type":"exact"},{"name":"long-chain-fatty-acid-[acyl-carrier protein] ligase activity","type":"exact"},{"name":"long-chain-fatty-acid-[acyl-carrier-protein] ligase activity","type":"exact"},{"name":"long-chain-fatty-acid-acyl-carrier-protein ligase activity","type":"related"},{"name":"long-chain-fatty-acid:acyl-carrier-protein ligase (AMP-forming) activity","type":"related"},{"name":"stearoyl-ACP synthetase activity","type":"related"}],"termid":"GO:0008922"}


id: PATO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An 1-D extent quality inhering in two-dimensional bearer by virtue of being equal to the distance around it.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Perimeter"],"direct_ancestors":[{"relation_name":"is_a","term_name":"length","termid":"PATO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perimeter","termid":"PATO:0001711"}


id: PBO:0017832
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Cdc Four","termid":"PBO:0017832"}


id: PBO:0058016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3942","termid":"PBO:0058016"}


id: PR:O14321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg6 gene.","definition_xrefs":["UniProtKB:O14321","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 24-C-methyltransferase erg6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.05","synonyms":[{"name":"Spom972h-erg6","type":"exact"},{"name":"delta(24)-sterol C-methyltransferase erg6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14321"}


id: GO:0047410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + charged-fMet-tRNAs = L-methionylaminoacyl-tRNA + formate.","definition_xrefs":["MetaCyc:3.5.1.27-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete N-formylmethionylaminoacyl-tRNA deformylase activity (obsolete GO:0047410)","synonyms":[{"name":"N-formyl-L-methionylaminoacyl-tRNA amidohydrolase activity","type":"exact"}],"termid":"GO:0047410"}


id: FYPO:0000047
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119778,119779,119782,119780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000674"}],"single_locus_phenotype":[{"annotations":[119532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001690"},{"annotations":[119696,119453,119698,119697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001357"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population of cells grow normally (i.e. indistinguishably from wild type). Cell population growth refers to an increase in the number of cells in the population as individual cells grow and divide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population growth phenotype","termid":"FYPO:0000139"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_00601":null,"SJAG_01355":null,"SJAG_01946":null,"SJAG_03198":null,"SJAG_03575":null,"SJAG_03720":null},"genotype_count":8,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]},"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01946","SJAG_03575","SJAG_03198"],"name":"normal cell population growth","references_by_uniquename":{"PMID:23090706":null,"PMID:23786411":null,"PMID:25318672":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_00601","SJAG_00426","SJAG_01355","SJAG_03720"],"single_locus_genotype_uniquenames":["cox6delta","rip1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","tel1delta"],"synonyms":[{"name":"growth normal","type":"broad"}],"termid":"FYPO:0000047","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000674":null,"FYPO:0001357":null,"FYPO:0001690":null}}


id: PBO:0050222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2","termid":"PBO:0050222"}


id: PBO:0039421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 1","termid":"PBO:0039421"}


id: PBO:0053454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 404","termid":"PBO:0053454"}


id: PBO:0017589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated beclin family protein Atg6","termid":"PBO:0017589"}


id: PBO:0088457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-body component, Nst1","termid":"PBO:0088457"}


id: MONDO:0013242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the BLK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066","MONDO:0005015","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 11","secondary_identifiers":["OMIM:613375","DOID:0111109","GARD:15653","MEDGEN:461968","SCTID:609578001","UMLS:C3150618"],"synonyms":[{"name":"BLK maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY11","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in BLK","type":"exact"},{"name":"maturity-onset diabetes of the young, type 11","type":"related"}],"termid":"MONDO:0013242","xrefs":{"Monarch":{"xref_id":"0013242"}}}


id: PBO:0114641
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur depletion response","termid":"PBO:0114641"}


id: PR:O14337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl7 gene.","definition_xrefs":["UniProtKB:O14337","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.02c","synonyms":[{"name":"Spom972h-mrpl7","type":"exact"}],"termid":"PR:O14337"}


id: MONDO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal infection of joint","secondary_identifiers":["icd11.foundation:1787713905","MEDGEN:509210","UMLS:C0153216","SCTID:44743006"],"synonyms":[{"name":"gonococcal arthritis","type":"related"},{"name":"gonococcal infection of joint","type":"exact"},{"name":"gonococcal joint infection","type":"related"},{"name":"gonococcal rheumatism","type":"related"}],"termid":"MONDO:0041903","xrefs":{"Monarch":{"xref_id":"0041903"}}}


id: PBO:0052788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 27","termid":"PBO:0052788"}


id: GO:0070787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the conidiophore over time, from its formation to the mature structure. The conidiophore is a specialized hypha that extends aerially from the growth substrate and bears conidia, or asexual spores.","definition_xrefs":["PMID:9529886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidiophore development","termid":"GO:0070787"}


id: MONDO:0011794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Dravet syndrome (DS) is a genetic epilepsy of childhood characterized by a variety of drug-resistant seizures often induced by fever, presenting in previously healthy children, and which frequently leads to cognitive and motor impairment.","definition_xrefs":["Orphanet:33069"],"gene_count":0,"genotype_count":0,"name":"obsolete Dravet syndrome (obsolete MONDO:0011794)","termid":"MONDO:0011794","xrefs":{"Monarch":{"xref_id":"0011794"}}}


id: MONDO:0100087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A degenerative disease of the brain that causes gradual loss of memory, judgment, and the ability to function socially. About 25% of all Alzheimer disease is familial (more than 2 people in a family have AD). When Alzheimer disease begins before 60 or 65 years of age (early-onset AD) about 60% of the cases are familial (also known as Early-onset familial AD). These cases appear to be inherited in an autosomal dominant manner.","definition_xrefs":["GARD:0000632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease","termid":"MONDO:0004975"},{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"familial Alzheimer disease","secondary_identifiers":["MEDGEN:82914","UMLS:C0276496"],"synonyms":[{"name":"Alzheimer disease, familial","type":"exact"},{"name":"FAD","type":"exact"},{"name":"GARD:0000632","type":"exact"}],"termid":"MONDO:0100087","xrefs":{"Monarch":{"xref_id":"0100087"}}}


id: PBO:0039590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7 like 1 (pseudogene)","termid":"PBO:0039590"}


id: PBO:0088949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Fyv7","termid":"PBO:0088949"}


id: FYPO:0004598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G2 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G2 phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004598"}


id: PBO:0027296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tetranucleate_vegetative_cell","termid":"PBO:0027296"}


id: PATO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A attachment quality inhering in a bearer by virtue of the bearer's having or being supported by a pedicel or pedicle.","definition_xrefs":["MedTerms:MedTerms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment quality","termid":"PATO:0001435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedicellate","termid":"PATO:0001438"}


id: GO:0071986
data:
  {"annotated_genes":["SJAG_03089","SJAG_03928","SJAG_00688","SJAG_01032"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93235,94392,105453,108160],"is_not":false,"summary":null,"term":"GO:0071986"}]},"cv_name":"cellular_component","definition":"A vacuolar membrane-anchored guanine nucleotide exchange factor (GEF) complex for the Rag GTPases (Gtr1-Gtr2 GTPase complex GO:1990131) in TORC1 signaling pathway. In human, Ragulator is comprised of the membrane anchor subunit LAMTOR1 (Meh1p in S. cerevisiae, Lam1 in S. pombe), a GEF subunit LAMTOR2 ( Slm4 in S. cerevisiae , Lam2 in S. pombe ) , LAMTOR3 (no S. cerevisiae ortholog identified, Lam3 in S. pombe) , LAMTOR4 (no S. cerevisiae ortholog identified, Lam4 in S. pombe), and LAMTOR5 (no S. cerevisiae or S. pombe ortholog identified).","definition_xrefs":["PMID:22980980","PMID:20381137","PMID:16732272","GOC:vw","PMID:19748353","PMID:29199950","PMID:15989961","PMID:19177150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"vacuolar membrane","termid":"GO:0005774"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00688":null,"SJAG_01032":null,"SJAG_03089":null,"SJAG_03928":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"Ragulator complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034449","GO:0034448"],"synonyms":[{"name":"EGO complex","type":"related"},{"name":"EGO-GSE complex","type":"related"},{"name":"GSE complex","type":"related"},{"name":"GTPase-containing complex for Gap1p sorting in the endosome","type":"related"},{"name":"MAPKSP1/ROBLD3/C11orf59 complex","type":"exact"},{"name":"Rag GEF","type":"exact"}],"termid":"GO:0071986","terms_by_termid":{"GO:0071986":null}}


id: PBO:0003493
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at DNA damage sites, Swi5_dependent","termid":"PBO:0003493"}


id: GO:0010145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructan, a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fructan metabolic process","synonyms":[{"name":"fructan metabolism","type":"exact"},{"name":"levan metabolic process","type":"exact"}],"termid":"GO:0010145"}


id: GO:0070536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:mah","PMID:19202061","PMID:19214193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K63-linked deubiquitination","termid":"GO:0070536"}


id: GO:0062054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a fluoride ion through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:23991286","PMID:25156118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"},{"relation_name":"is_a","term_name":"fluoride transmembrane transporter activity","termid":"GO:1903425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"fluoride channel activity","termid":"GO:0062054"}


id: MONDO:0013848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the GATAD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 2B","secondary_identifiers":["DOID:0110441","UMLS:C3553409","GARD:15832","MEDGEN:766323","OMIM:614672"],"synonyms":[{"name":"CMD2B","type":"exact"},{"name":"GATAD1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 2B","type":"related"},{"name":"cardiomyopathy, dilated, type 2B","type":"exact"},{"name":"dilated cardiomyopathy 2B","type":"exact"},{"name":"dilated cardiomyopathy type 2B","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in GATAD1","type":"exact"}],"termid":"MONDO:0013848","xrefs":{"Monarch":{"xref_id":"0013848"}}}


id: PBO:0066806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 105","termid":"PBO:0066806"}


id: PBO:0084037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell wall protein involved in weak acid resistance; basal expression requires Msn2p/Msn4p; expression is induced under conditions of stress and during the diauxic shift; SPI1 has a paralog, SED1, that arose from the whole genome duplication","termid":"PBO:0084037"}


id: PBO:0041074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP/retinoic acid inducible neural specific 3","termid":"PBO:0041074"}


id: PR:P41887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock protein HSP 90-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01614","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.04c","secondary_identifiers":["UniProtKB:P41887"],"synonyms":[{"name":"Spom972h-HSP90AA1","type":"exact"}],"termid":"PR:P41887"}


id: GO:0150175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphatidylethanolamine metabolic process.","definition_xrefs":["PMID:30074985","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phosphatidylethanolamine metabolic process","termid":"GO:0150175"}


id: GO:0033581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a galactose unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete protein galactosylation in Golgi (obsolete GO:0033581)","synonyms":[{"name":"protein amino acid galactosylation in Golgi","type":"exact"}],"termid":"GO:0033581"}


id: GO:0042059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"is_a","term_name":"negative regulation of ERBB signaling pathway","termid":"GO:1901185"},{"relation_name":"negatively_regulates","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-182971"],"synonyms":[{"name":"down regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of epidermal growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of EGFR signaling pathway","type":"exact"}],"termid":"GO:0042059"}


id: GO:0001174
data:
  {"annotated_genes":["SJAG_01523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77610],"is_not":false,"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"Any process involved in the selection of the specific location within the template strand of an RNA polymerase II promoter for hybridization of the cognate ribonucleotides and formation of first phosphodiester bond within the nascent transcript.","definition_xrefs":["GOC:txnOH","PMID:16826228","PMID:18846104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcriptional start site selection","termid":"GO:0001173"},{"relation_name":"part_of","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01523":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcriptional start site selection at RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001174","terms_by_termid":{"GO:0001174":null}}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: MONDO:0005232
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant epithelial neoplasm composed of large, atypical cells.","definition_xrefs":["NCIT:C3780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0206704","ICDO:8012/3","MESH:D018287","MEDGEN:61665","DOID:4552"],"synonyms":[{"name":"carcinoma, large cell","type":"exact"},{"name":"large cell carcinoma","type":"exact"}],"termid":"MONDO:0005232","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005232"}}}


id: MONDO:0012239
data:
  {"annotated_genes":["SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85516],"is_not":false,"summary":null,"term":"MONDO:0012239"}]},"cv_name":"mondo","definition":"Any congenital myopathy in which the cause of the disease is a mutation in the TPM3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"},{"relation_name":"is_a","term_name":"TPM3-related myopathy","termid":"MONDO:0100108"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myopathy 4B, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5829889","OMIM:609284","GARD:15453","DOID:0110926","MEDGEN:1840525","MESH:C538348"],"synonyms":[{"name":"NEM1","type":"related"},{"name":"Nem1","type":"related"},{"name":"TPM3 nemaline myopathy","type":"exact"},{"name":"nemaline myopathy 1","type":"related"},{"name":"nemaline myopathy 1, autosomal dominant or recessive","type":"related"},{"name":"nemaline myopathy caused by mutation in TPM3","type":"exact"},{"name":"nemaline myopathy type 1","type":"related"}],"termid":"MONDO:0012239","terms_by_termid":{"MONDO:0012239":null},"xrefs":{"Monarch":{"xref_id":"0012239"}}}


id: MONDO:0011261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepiphyseal dysplasia characterized by spondyloepiphyseal dysplasia, craniosynostosis, cataracts, cleft palate and intellectual deficit. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["Orphanet:163649"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","secondary_identifiers":["OMIM:602611","MESH:C566515","DOID:0112294","MEDGEN:355919","SCTID:718766002","GARD:16993","UMLS:C1865134"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","type":"exact"},{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and mental retardation","type":"exact"},{"name":"spondyloepiphyseal dysplasia-craniosynostosis-cleft palate-cataract-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0011261","xrefs":{"Monarch":{"xref_id":"0011261"}}}


id: PBO:0029133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell_after_meiosis_II","termid":"PBO:0029133"}


id: PBO:0079591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D3 pseudogene 3","termid":"PBO:0079591"}


id: MOD:00707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-tyrosine residue to a multihydroxylated L-phenylalanine","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated tyrosine","synonyms":[{"name":"HyTyr","type":"exact"}],"termid":"MOD:00707"}


id: GO:0000036
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76110],"is_not":false,"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding an acyl group and presenting it for processing or offloading to a cognate enzyme. Covalently binds the acyl group via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The acyl carrier protein (ACP) presents substrates to enzymes involved in fatty acid biosynthesis or in polyketide secondary metabolite biosynthesis.","definition_xrefs":["GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ACP phosphopantetheine attachment site binding","termid":"GO:0044620"},{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0140104","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acyl carrier activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process","type":"exact"}],"termid":"GO:0000036","terms_by_termid":{"GO:0000036":null}}


id: MONDO:0850445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peritoneal benign neoplasm that is characterized by the presence of prominent hemangiopericytoma-like vessels.","definition_xrefs":["DOID:0081026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign peritoneal solitary fibrous tumor","termid":"MONDO:0850445","xrefs":{"Monarch":{"xref_id":"0850445"}}}


id: GO:0003026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in the aorta and responding to the input via central nervous system control.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by aortic arch baroreceptor feedback","synonyms":[{"name":"aortic arch baroreceptor control of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0003026"}


id: GO:0042263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neuropeptide F and transmitting the signal within the cell to initiate a change in cell activity. Neuropeptide F is an arthropod peptide of more than 28 residues (typically 28-45) with a consensus C-terminal RxRFamide (commonly RPRFa, but also RVRFa.","definition_xrefs":["PMID:21440021","GOC:bf","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neuropeptide F receptor activity","synonyms":[{"name":"NPF receptor activity","type":"exact"}],"termid":"GO:0042263"}


id: PBO:0071719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 17","termid":"PBO:0071719"}


id: MONDO:0017884
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","definition":"A rare subtype of renal cell carcinoma, arising from the renal tubular epithelium and showing a papillary growth pattern, which typically manifests with hematuria, flank pain, palpable abdominal mass or nonspecific symptoms, such as fatigue, weight loss or fever. Symptoms related to metastatic spread, such as bone pain or persistent cough, are frequently associated since early diagnosis is not common. It is typically multifocal, bilateral, and in most cases sporadic, although different hereditary syndromes, such as Hereditary leiomyoma renal cell carcinoma, Birt-Hogg-DubC) syndrome and Tuberous sclerosis, may predispose to the development of papillary renal cell carcinoma.","definition_xrefs":["Orphanet:319298"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited renal cancer-predisposing syndrome (obsolete MONDO:0017891)","termid":"MONDO:0017891"},{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"papillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000640","ONCOTREE:PRCC","DOID:4465","NCIT:C6975","MEDGEN:266300","SCTID:733608000","GARD:9572","UMLS:C1306837"],"synonyms":[{"name":"HPRCC","type":"exact"},{"name":"RCCP","type":"related"},{"name":"RCCP1","type":"related"},{"name":"chromophil RCC","type":"related"},{"name":"chromophil carcinoma of kidney","type":"exact"},{"name":"chromophil carcinoma of the kidney","type":"exact"},{"name":"chromophil renal cell carcinoma","type":"exact"},{"name":"papillary (chromophil) renal cell carcinoma","type":"exact"},{"name":"papillary kidney carcinoma","type":"exact"},{"name":"papillary renal carcinoma, malignant - (subtype)","type":"related"},{"name":"papillary renal cell adenocarcinoma","type":"exact"},{"name":"papillary renal cell cancer","type":"exact"},{"name":"papillary renal cell carcinoma","type":"exact"},{"name":"papillary renal cell carcinoma, bilateral - (subtype)","type":"related"},{"name":"papillary renal cell carcinoma, familial - (subtype)","type":"related"},{"name":"papillary renal cell carcinoma, multiple - (subtype)","type":"related"},{"name":"papillary renal cell carcinoma, sporadic - (subtype)","type":"related"},{"name":"renal adenocarcinoma","type":"related"},{"name":"renal cell carcinoma, papillary, 1","type":"related"},{"name":"renal cell carcinoma, papillary, type 1","type":"exact"},{"name":"sporadic papillary renal cell carcinoma","type":"exact"}],"termid":"MONDO:0017884","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0017884"}}}


id: GO:1901879
data:
  {"annotated_genes":["SJAG_02700","SJAG_00279","SJAG_04312","SJAG_01993","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80555,79524,92665,76057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[102169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein depolymerization.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:12032137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein polymer breakdown","type":"exact"},{"name":"regulation of protein polymer catabolic process","type":"exact"},{"name":"regulation of protein polymer catabolism","type":"exact"},{"name":"regulation of protein polymer degradation","type":"exact"}],"termid":"GO:1901879","terms_by_termid":{"GO:0031117":null,"GO:0051016":null}}


id: PBO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Rgg8 (predicted)","termid":"PBO:0001827"}


id: PBO:0003674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator, multiprotein bridging factor Mbf1 (predicted)","termid":"PBO:0003674"}


id: PBO:0082872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein involved in ER-plasma membrane (PM) tethering; one of 6 proteins (Ist2, Scs2, Scs22, Tcb1, Tcb2, Tcb3) that connect ER to PM, regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1 phosphatase to PI4P; required to locate Osh6, Osh7 in ER/PM contact site to allow phosphatidylserine transport from ER to PM; localizes to mother in small-budded cells, to bud in medium-, large-budded cells; mRNA transported to bud tip by actomyosin-driven process","termid":"PBO:0082872"}


id: GO:0071248
data:
  {"annotated_genes":["SJAG_04454","SJAG_04516","SJAG_01351","SJAG_04403","SJAG_01344","SJAG_01233","SJAG_02858","SJAG_02599","SJAG_00988","SJAG_03631","SJAG_03497","SJAG_03799","SJAG_03879","SJAG_00044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93477],"is_not":false,"summary":null,"term":"GO:0071248"},{"annotations":[118502,93651,108746,71183,97344,97382],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098849"},{"annotations":[89223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071276"},{"annotations":[110471,114980,113665,116427,98435,101313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071277"},{"annotations":[114981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035865"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00988":null,"SJAG_01233":null,"SJAG_01344":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_02858":null,"SJAG_03497":null,"SJAG_03631":null,"SJAG_03799":null,"SJAG_03879":null,"SJAG_04403":null,"SJAG_04454":null,"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to metal ion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to heavy metal","type":"narrow"},{"name":"cellular response to metal","type":"exact"}],"termid":"GO:0071248","terms_by_termid":{"GO:0035865":null,"GO:0071248":null,"GO:0071276":null,"GO:0071277":null,"GO:0098849":null}}


id: PBO:0042017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74A","termid":"PBO:0042017"}


id: PBO:0080742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPA binding protein 2","termid":"PBO:0080742"}


id: PBO:0047942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(14)(q24.1)","termid":"PBO:0047942"}


id: GO:1903433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["GOC:TermGenie","GOC:als","GO_REF:0000058","PMID:22899725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of constitutive secretory pathway","termid":"GO:1903433"}


id: SO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (one running N-terminal to C-terminal and one running C-terminal to N-terminal). Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i) and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they form two mutual backbone hydrogen bonds to each other's flanking peptide groups; this is known as a close pair of hydrogen bonds. The peptide backbone dihedral angles (phi, psi) are about (-140 degrees, 135 degrees) in antiparallel sheets.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"antiparallel_beta_strand","secondary_identifiers":["BS:0000341"],"synonyms":[{"name":"antiparallel beta strand","type":"exact"}],"termid":"SO:0001112"}


id: PBO:0044130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 16, pseudogene","termid":"PBO:0044130"}


id: PATO:0001626
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer has enough functionality.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sufficiency","synonyms":[{"name":"adequacy","type":"related"}],"termid":"PATO:0001626"}


id: PBO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 9","termid":"PBO:0061146"}


id: GO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of hardened covering (a scab) at a wound site. The scab has multiple functions including limiting blood loss, providing structural stability to the wound and guarding against infection.","definition_xrefs":["GOC:bf","PMID:15269788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"scab formation","termid":"GO:0035314"}


id: PR:Q10752
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.01","secondary_identifiers":["UniProtKB:Q10752"],"synonyms":[{"name":"SPBC19C2.01","type":"related"},{"name":"Spom972h-DHX16","type":"exact"},{"name":"pre-mRNA-processing protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"prp8","type":"related"}],"termid":"PR:Q10752"}


id: PBO:0000735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding protein, coronin Crn1","termid":"PBO:0000735"}


id: PBO:0065889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB36, member RAS oncogene family","termid":"PBO:0065889"}


id: GO:0048514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of blood vessels are generated and organized. The blood vessel is the vasculature carrying blood.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel morphogenesis","termid":"GO:0048514"}


id: PBO:0047249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 238 member C","termid":"PBO:0047249"}


id: PBO:0044165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-lyase","termid":"PBO:0044165"}


id: MONDO:0031006
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85929],"is_not":false,"summary":null,"term":"MONDO:0031006"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with ataxia and late-onset optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5543254","MEDGEN:1779901","OMIM:619259"],"synonyms":[{"name":"NDAXOA","type":"exact"}],"termid":"MONDO:0031006","terms_by_termid":{"MONDO:0031006":null},"xrefs":{"Monarch":{"xref_id":"0031006"}}}


id: PBO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome","termid":"PBO:0000327"}


id: MONDO:0000073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nail disorder, nonsyndromic congenital (obsolete MONDO:0000073)","termid":"MONDO:0000073","xrefs":{"Monarch":{"xref_id":"0000073"}}}


id: MONDO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease affecting a single peripheral nerve of the upper limb.","direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuritis simplex","termid":"MONDO:0002121"},{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"upper limb mononeuronitis","secondary_identifiers":["DOID:1844","ICD9:354.9"],"synonyms":[{"name":"forelimb mononeuritis simplex","type":"exact"},{"name":"mononeuritis of upper limb","type":"exact"},{"name":"mononeuritis of upper limb, unspecified","type":"exact"},{"name":"mononeuritis simplex of forelimb","type":"exact"},{"name":"mononeuritis upper limb","type":"exact"}],"termid":"MONDO:0002130","xrefs":{"Monarch":{"xref_id":"0002130"}}}


id: PBO:0057726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-10","termid":"PBO:0057726"}


id: MONDO:0014804
data:
  {"annotated_genes":["SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86154],"is_not":false,"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"autosomal recessive sideroblastic anemia","termid":"MONDO:0016828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0004069","MONDO:0006025","MONDO:0005570"],"is_obsolete":false,"name":"sideroblastic anemia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:895975","SCTID:720465002","GARD:17235","DOID:0080343","OMIM:616860","Orphanet:255132","UMLS:C4225155"],"synonyms":[{"name":"GLRX5-related sideroblastic anaemia","type":"exact"},{"name":"GLRX5-related sideroblastic anemia","type":"exact"},{"name":"SIDBA3","type":"exact"},{"name":"adult-onset autosomal recessive sideroblastic anaemia","type":"exact"},{"name":"adult-onset autosomal recessive sideroblastic anemia","type":"exact"},{"name":"anemia, sideroblastic, 3, pyridoxine-refractory","type":"exact"}],"termid":"MONDO:0014804","terms_by_termid":{"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0014804"}}}


id: MONDO:0019769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Renpenning syndrome","termid":"MONDO:0010653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Sutherland-Haan type","secondary_identifiers":["Orphanet:93950","GARD:19242","UMLS:C5681613","MEDGEN:1842836"],"termid":"MONDO:0019769","xrefs":{"Monarch":{"xref_id":"0019769"}}}


id: GO:0052842
data:
  {"annotated_genes":["SJAG_04870","SJAG_00244","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89064,105523,115361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052843"},{"annotations":[89065,105524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052845"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: diphospho-1D-myo-inositol pentakisphosphate + H2O = 1D-myo-inositol hexakisphosphate + phosphate.","definition_xrefs":["PMID:10827188","PMID:11502751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"inositol diphosphate pentakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855198","Reactome:R-HSA-2023971"],"termid":"GO:0052842","terms_by_termid":{"GO:0052843":null,"GO:0052845":null}}


id: MONDO:0005372
data:
  {"annotated_genes":["SJAG_02294","SJAG_03635","SJAG_00663","SJAG_02463","SJAG_02006","SJAG_02223","SJAG_04663","SJAG_03051","SJAG_05196","SJAG_03418","SJAG_03698","SJAG_02690","SJAG_00786","SJAG_01465","SJAG_03286","SJAG_02035","SJAG_04324","SJAG_02339","SJAG_02500","SJAG_00377","SJAG_01941","SJAG_04176","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013901"},{"annotations":[87536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014961"},{"annotations":[85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054725"},{"annotations":[85569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054726"},{"annotations":[86759,86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054732"},{"annotations":[87160,87161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011720"},{"annotations":[85520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009461"},{"annotations":[86429,86428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030507"},{"annotations":[86446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030515"},{"annotations":[87438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030733"},{"annotations":[87301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030787"},{"annotations":[86320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024773"},{"annotations":[86339,86335,86338,86341,86340,86337,86336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[86067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030869"}]},"cv_name":"mondo","definition":"The inability of the male to effect fertilization of an ovum after a specified period of unprotected intercourse. Male sterility is permanent infertility.","definition_xrefs":["MESH:D007248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"infertility disorder","termid":"MONDO:0005047"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_00663":null,"SJAG_00786":null,"SJAG_01465":null,"SJAG_01837":null,"SJAG_01941":null,"SJAG_02006":null,"SJAG_02035":null,"SJAG_02223":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02463":null,"SJAG_02500":null,"SJAG_02690":null,"SJAG_03051":null,"SJAG_03286":null,"SJAG_03418":null,"SJAG_03635":null,"SJAG_03698":null,"SJAG_04176":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"male infertility","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:5796","DOID:12336","SCTID:2904007","icd11.foundation:753457327","UMLS:C0021364","EFO:0004248","ICD10CM:N46","ICD9:606","ICD9:606.9"],"synonyms":[{"name":"infertility disorder of male reproductive system","type":"exact"},{"name":"male reproductive system infertility","type":"exact"},{"name":"male reproductive system infertility disorder","type":"exact"}],"termid":"MONDO:0005372","terms_by_termid":{"MONDO:0009461":null,"MONDO:0010767":null,"MONDO:0011720":null,"MONDO:0013901":null,"MONDO:0014961":null,"MONDO:0024773":null,"MONDO:0030507":null,"MONDO:0030515":null,"MONDO:0030733":null,"MONDO:0030787":null,"MONDO:0030869":null,"MONDO:0054725":null,"MONDO:0054726":null,"MONDO:0054732":null},"xrefs":{"Monarch":{"xref_id":"0005372"}}}


id: PBO:0047314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAST kinase domains 3","termid":"PBO:0047314"}


id: PBO:0054492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1892","termid":"PBO:0054492"}


id: PR:000044741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase dma1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"E3 ubiquitin-protein ligase dma1","termid":"PR:000027845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dma1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC17G8.10c","synonyms":[{"name":"Spom-dma1","type":"exact"}],"termid":"PR:000044741"}


id: SO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyl_2_thiouridine","secondary_identifiers":["RNAMOD:059"],"synonyms":[{"name":"5-methyl-2-thiouridine","type":"exact"},{"name":"five methyl 2 thiouridine","type":"exact"},{"name":"m5s2U","type":"exact"}],"termid":"SO:0001351"}


id: PBO:0080940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zonadhesin","termid":"PBO:0080940"}


id: GO:0038143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric complex between the tyrosine kinase receptor ERBB2 and a ligand-activated receptor ERBB3. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB3.","definition_xrefs":["PMID:16460914","PMID:8665853","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"ERBB3:ERBB2 complex","synonyms":[{"name":"EGFR:ERBB2 heterodimer","type":"narrow"},{"name":"NRG1/2:ERBB3:ERBB2","type":"narrow"}],"termid":"GO:0038143"}


id: GO:0032281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. The AMPA receptors mediate fast synaptic transmission in the CNS and are composed of subunits GluR1-4, products from separate genes. These subunits have an extracellular N-terminus and an intracellular C-terminus.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"AMPA glutamate receptor complex","synonyms":[{"name":"AMPA receptor","type":"related"},{"name":"AMPA-selective glutamate receptor complex","type":"exact"},{"name":"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex","type":"exact"}],"termid":"GO:0032281"}


id: SO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the alteration of codon meaning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon_redefined","synonyms":[{"name":"codon redefined","type":"exact"}],"termid":"SO:0000882"}


id: GO:0044653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dextrin + H2O = alpha-D-glucose.","definition_xrefs":["PMID:18556189"],"gene_count":0,"genotype_count":0,"name":"obsolete dextrin alpha-glucosidase activity (obsolete GO:0044653)","termid":"GO:0044653"}


id: PATO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A consumption which is relatively high.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000767 increased consumption (obsolete PATO:0000767)","synonyms":[{"name":"high consumption","type":"exact"},{"name":"increased propensity to consume","type":"related"}],"termid":"PATO:0000767"}


id: PBO:0051495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF11 antisense RNA 1","termid":"PBO:0051495"}


id: GO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism stops, prevents, or reduces the frequency, rate or extent of translation, the chemical reactions and pathways resulting in the formation of a protein, in its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host translation (obsolete GO:0044074)","synonyms":[{"name":"negative regulation of host translation by symbiont","type":"exact"}],"termid":"GO:0044074"}


id: GO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA + NADPH + H+ = 4 CoA + isoliquiritigenin + 3 CO2 + NADP+ + H2O.","definition_xrefs":["EC:2.3.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"6'-deoxychalcone synthase activity","secondary_identifiers":["RHEA:10584","MetaCyc:RXN-3142"],"synonyms":[{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing, reducing) activity","type":"related"}],"termid":"GO:0033808"}


id: MONDO:0005998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infestation with mites of the genus Trombiculidae, whose larvae carry the rickettsial agent of scrub typhus.","definition_xrefs":["MESH:D014323-modified"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mite infestation","termid":"MONDO:0004389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trombiculiasis","secondary_identifiers":["MEDGEN:11928","MESH:D014323","DOID:8399","UMLS:C0041170"],"synonyms":[{"name":"Trombiculidae caused disease or disorder","type":"exact"},{"name":"Trombiculidae disease or disorder","type":"exact"},{"name":"Trombiculidae infectious disease","type":"exact"}],"termid":"MONDO:0005998","xrefs":{"Monarch":{"xref_id":"0005998"}}}


id: FYPO:0002443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin cable retrograde transport is normal (i.e. indistinguishable from wild type). The process results in arrangement of actin cables from the periphery toward the interior of the cell. Actin cables are parallel actin filament bundles nucleated by formin, and are the most common form of actin filament bundles found in yeasts.","definition_xrefs":["PMID:23051734","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of actin cable retrograde transport","synonyms":[{"name":"normal rate of actin cable retrograde transport during mitotic cell cycle","type":"related"},{"name":"normal rate of actin cable retrograde transport during vegetative growth","type":"exact"},{"name":"normal rate of formin-nucleated actin cable retrograde flow","type":"exact"},{"name":"normal rate of formin-nucleated actin cable retrograde transport","type":"exact"}],"termid":"FYPO:0002443"}


id: PBO:0070785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 15","termid":"PBO:0070785"}


id: MONDO:0014949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the FGF12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undetermined early-onset epileptic encephalopathy","termid":"MONDO:0018614"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 47","secondary_identifiers":["OMIM:617166","MEDGEN:934652","DOID:0080425","UMLS:C4310685","GARD:16206"],"synonyms":[{"name":"DEE47","type":"exact"},{"name":"EIEE47","type":"exact"},{"name":"FGF12 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 47","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in FGF12","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 47","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 47; EIEE47","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 47","type":"exact"}],"termid":"MONDO:0014949","xrefs":{"Monarch":{"xref_id":"0014949"}}}


id: PBO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit alpha1","termid":"PBO:0048197"}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: GO:0043998
data:
  {"annotated_genes":["SJAG_03537"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74437],"is_not":false,"summary":null,"term":"GO:0043998"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine = CoA + histone H2A N6-acetyl-L-lysine.","definition_xrefs":["PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase activity","termid":"GO:0004402"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016740","GO:0016746","GO:0003674","GO:0034212"],"is_obsolete":false,"name":"histone H2A acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"H2A histone acetylase activity","type":"exact"},{"name":"H2A histone acetyltransferase activity","type":"exact"},{"name":"H2A histone lysine N-acetyltransferase activity","type":"exact"}],"termid":"GO:0043998","terms_by_termid":{"GO:0043998":null}}


id: PBO:0066430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERG antisense RNA 1","termid":"PBO:0066430"}


id: GO:0043827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine57/adenosine58 in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N1-methyladenosine57/N1-methyladenosine58 in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20483913","PMID:14739239","RHEA:41740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140101","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"tRNA (adenine(57)-N1)/(adenine(58)-N1)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.219"],"synonyms":[{"name":"tRNA (adenine(57)-N(1))/(adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-)/(adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine(57)-N1-/adenine(58)-N1-)-methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58 N1-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N(1)-) methyltransferase activity","type":"exact"},{"name":"tRNA (adenine-57, 58-N1-) methyltransferase activity","type":"exact"}],"termid":"GO:0043827"}


id: GO:0060497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information between a mesenchymal cell and an endodermal cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-endodermal cell signaling","synonyms":[{"name":"mesenchymal-endodermal cell signalling","type":"exact"}],"termid":"GO:0060497"}


id: PBO:0089855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15","termid":"PBO:0089855"}


id: PBO:0063464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor beta","termid":"PBO:0063464"}


id: GO:0009910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flower development","termid":"GO:0009909"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flower development","synonyms":[{"name":"down regulation of flower development","type":"exact"},{"name":"down-regulation of flower development","type":"exact"},{"name":"downregulation of flower development","type":"exact"},{"name":"inhibition of flower development","type":"narrow"}],"termid":"GO:0009910"}


id: GO:0031755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-2 lysophosphatidic acid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"Edg-2 lysophosphatidic acid receptor binding","synonyms":[{"name":"Edg-2 lysophosphatidic acid receptor ligand","type":"narrow"},{"name":"LPA1 receptor binding","type":"exact"}],"termid":"GO:0031755"}


id: MONDO:1012134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin G2 deficiency, non-human animal","termid":"MONDO:1011728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin G2 deficiency, cattle","secondary_identifiers":["OMIA:000555-9913"],"termid":"MONDO:1012134","xrefs":{"Monarch":{"xref_id":"1012134"}}}


id: PATO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000293 absolute activity value (obsolete PATO:0000293)","termid":"PATO:0000293"}


id: PBO:0044079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin pseudogene 1","termid":"PBO:0044079"}


id: GO:0016216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine + O2 = 2 H2O + isopenicillin N.","definition_xrefs":["RHEA:22428","EC:1.21.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isopenicillin-N synthase activity","secondary_identifiers":["MetaCyc:1.21.3.1-RXN","KEGG_REACTION:R04872"],"synonyms":[{"name":"N-[(5S)-5-amino-5-carboxypentanoyl]-L-cysteinyl-D-valine:oxygen oxidoreductase (cyclizing)","type":"related"},{"name":"isopenicillin N synthase activity","type":"related"},{"name":"isopenicillin-N synthetase activity","type":"exact"}],"termid":"GO:0016216"}


id: MOD:00415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - OBSOLETE because Unimod entry 22 is now merged with entry 21 remap to MOD:00696 'phosphorylated residue'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00415 phosphorylation without neutral loss (obsolete MOD:00415)","termid":"MOD:00415"}


id: GO:0150117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell-substrate junction organization.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"positively_regulates","term_name":"cell-substrate junction organization","termid":"GO:0150115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell-substrate junction organization","termid":"GO:0150117"}


id: PBO:0039766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 1 (Colton blood group)","termid":"PBO:0039766"}


id: PBO:0028946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate-cysteine_ligase_activity","termid":"PBO:0028946"}


id: GO:0120297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dopamine + L-glutaminyl-[histone] = 5-dopaminyl-L-glutamyl-[histone] + NH4(+).","definition_xrefs":["GOC:sp","PMID:32273471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide dopaminyltransferase activity","termid":"GO:0120296"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone dopaminyltransferase activity","termid":"GO:0120297"}


id: PR:O60154
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C7.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.05","synonyms":[{"name":"Spom972h-SPBC19C7.05","type":"exact"}],"termid":"PR:O60154"}


id: CHEBI:9168
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirolimus","termid":"CHEBI:9168"}


id: GO:1905816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dorsal/ventral axon guidance.","definition_xrefs":["GOC:TermGenie","PMID:18434533","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon guidance","termid":"GO:1902668"},{"relation_name":"is_a","term_name":"regulation of dorsal/ventral axon guidance","termid":"GO:1905815"},{"relation_name":"negatively_regulates","term_name":"dorsal/ventral axon guidance","termid":"GO:0033563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dorsal/ventral axon guidance","synonyms":[{"name":"down regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"down regulation of dorsal/ventral axon guidance","type":"exact"},{"name":"down regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"down regulation of dorsoventral axon guidance","type":"exact"},{"name":"down-regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"down-regulation of dorsal/ventral axon guidance","type":"exact"},{"name":"down-regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"down-regulation of dorsoventral axon guidance","type":"exact"},{"name":"downregulation of dorsal-ventral axon guidance","type":"exact"},{"name":"downregulation of dorsal/ventral axon guidance","type":"exact"},{"name":"downregulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"downregulation of dorsoventral axon guidance","type":"exact"},{"name":"inhibition of dorsal-ventral axon guidance","type":"narrow"},{"name":"inhibition of dorsal/ventral axon guidance","type":"narrow"},{"name":"inhibition of dorsal/ventral axon pathfinding","type":"narrow"},{"name":"inhibition of dorsoventral axon guidance","type":"narrow"},{"name":"negative regulation of dorsal-ventral axon guidance","type":"exact"},{"name":"negative regulation of dorsal/ventral axon pathfinding","type":"exact"},{"name":"negative regulation of dorsoventral axon guidance","type":"exact"}],"termid":"GO:1905816"}


id: FYPO:0000578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gene silencing is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal gene silencing","synonyms":[{"name":"normal gene silencing during mitotic cell cycle","type":"related"},{"name":"normal gene silencing during vegetative growth","type":"exact"},{"name":"silencing: normal","type":"related"}],"termid":"FYPO:0000578"}


id: MONDO:0019436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Childhood arthritis typically associated with psoriasis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile idiopathic arthritis","termid":"MONDO:0011429"},{"relation_name":"is_a","term_name":"psoriatic arthritis","termid":"MONDO:0011849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"psoriasis-related juvenile idiopathic arthritis","secondary_identifiers":["Orphanet:85436","ICD10EXP:M09.0*","NCIT:C114361","ICD10EXP:L40.5+","SCTID:239802003","EFO:0009733","icd11.foundation:1473955563","UMLS:C3714758","MEDGEN:811463","GARD:10970"],"synonyms":[{"name":"JPsA","type":"exact"},{"name":"juvenile psoriatic arthritis","type":"exact"},{"name":"psoriasis-related JIA","type":"exact"}],"termid":"MONDO:0019436","xrefs":{"Monarch":{"xref_id":"0019436"}}}


id: GO:0030397
data:
  {"annotated_genes":["SJAG_00840","SJAG_04578","SJAG_00680","SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[103980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[74769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034496"},{"annotations":[94178,103983],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"}]},"cv_name":"biological_process","definition":"The controlled breakdown of any cell membrane in the context of a normal process such as autophagy.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_00840":null,"SJAG_02100":null,"SJAG_04578":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane disassembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"membrane breakdown","type":"exact"},{"name":"membrane catabolism","type":"exact"},{"name":"membrane degradation","type":"exact"}],"termid":"GO:0030397","terms_by_termid":{"GO:0007077":null,"GO:0034496":null,"GO:0140516":null,"GO:1905557":null}}


id: GO:0015560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (L-idonate or D-gluconate)(out) + H+(out) = (L-iodonate or D-gluconate)(in) + H+(in).","definition_xrefs":["TC:2.A.8.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate/D-gluconate:hydrogen symporter activity (obsolete GO:0015560)","synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"exact"},{"name":"L-idonate/D-gluconate:proton symporter","type":"exact"}],"termid":"GO:0015560"}


id: PBO:0040985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 family apoptosis regulator BOK","termid":"PBO:0040985"}


id: PBO:0072689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX1 intronic transcript 1","termid":"PBO:0072689"}


id: PBO:0058060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4280 host gene","termid":"PBO:0058060"}


id: PBO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 21 member F, pseudogene","termid":"PBO:0046899"}


id: PBO:0049990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2 pseudogene 1","termid":"PBO:0049990"}


id: PBO:0112005
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repeat Specific Silencing factor","termid":"PBO:0112005"}


id: MONDO:0019007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal atresia","secondary_identifiers":["MEDGEN:232948","GARD:18867","icd11.foundation:1126562070","UMLS:C1321884","MedDRA:10046879","HP:0000148","Orphanet:65681"],"termid":"MONDO:0019007","xrefs":{"Monarch":{"xref_id":"0019007"}}}


id: PBO:0059293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L44","termid":"PBO:0059293"}


id: GO:0008224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, Gram-positive bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive antibacterial peptide activity (obsolete GO:0008224)","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"exact"}],"termid":"GO:0008224"}


id: PBO:0052320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1210","termid":"PBO:0052320"}


id: GO:0009279
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["GOC:md","GOC:mtg_sensu","ISBN:0135712254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer membrane","termid":"GO:0019867"},{"relation_name":"part_of","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell outer membrane","synonyms":[{"name":"outer membrane of cell","type":"exact"}],"termid":"GO:0009279"}


id: PBO:0074350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatomedin B domain containing 1, pseudogene","termid":"PBO:0074350"}


id: GO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within a cell, either in a vascular tissue or in the vascular membrane.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"vascular transport","termid":"GO:0010232"}


id: GO:1903595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of histamine secretion by mast cell.","definition_xrefs":["PMID:18253931","GOC:als","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mast cell degranulation","termid":"GO:0043306"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response","termid":"GO:0050729"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of histamine secretion by mast cell","termid":"GO:1903593"},{"relation_name":"positively_regulates","term_name":"histamine secretion by mast cell","termid":"GO:0002553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of histamine secretion by mast cell","synonyms":[{"name":"activation of histamine secretion by mast cell","type":"narrow"},{"name":"up regulation of histamine secretion by mast cell","type":"exact"},{"name":"up-regulation of histamine secretion by mast cell","type":"exact"},{"name":"upregulation of histamine secretion by mast cell","type":"exact"}],"termid":"GO:1903595"}


id: PBO:0059903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 26","termid":"PBO:0059903"}


id: GO:0030953
data:
  {"annotated_genes":["SJAG_02761","SJAG_04841","SJAG_02737","SJAG_00856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100700,106764],"is_not":false,"summary":null,"term":"GO:0030953"},{"annotations":[76687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[117238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of astral microtubules, any of the spindle microtubules that radiate in all directions from the spindle poles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle organization","termid":"GO:0007051"},{"relation_name":"is_a","term_name":"cytoplasmic microtubule organization","termid":"GO:0031122"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"astral microtubule organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"astral microtubule organisation","type":"exact"},{"name":"astral microtubule organization and biogenesis","type":"related"}],"termid":"GO:0030953","terms_by_termid":{"GO:0030953":null,"GO:0030954":null,"GO:0060172":null}}


id: GO:0034066
data:
  {"annotated_genes":["SJAG_00143","SJAG_06588"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76130,77597],"is_not":false,"summary":null,"term":"GO:0034066"}]},"cv_name":"cellular_component","definition":"A protein complex that acts as a nucleotide exchange factor for the GTPase Ypt6p, and is required for fusion of endosome-derived vesicles with the Golgi.","definition_xrefs":["GOC:jh","GOC:mah","PMID:10990452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"Ric1-Rgp1 guanyl-nucleotide exchange factor complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Ric1p-Rgp1p complex","type":"related"}],"termid":"GO:0034066","terms_by_termid":{"GO:0034066":null}}


id: PBO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_assembly","termid":"PBO:0031254"}


id: MONDO:0018577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthoma elasticum-like skin manifestations with retinitis pigmentosa","secondary_identifiers":["GARD:21820","MEDGEN:1810682","Orphanet:436274","UMLS:C5680045"],"synonyms":[{"name":"PXE-like syndrome with retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0018577","xrefs":{"Monarch":{"xref_id":"0018577"}}}


id: PBO:0060769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5","termid":"PBO:0060769"}


id: GO:0001553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes resulting in differentiation of theca and granulosa cells into luteal cells and in the formation of a corpus luteum after ovulation.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteinization","secondary_identifiers":["Wikipedia:Luteinization","Wikipedia:Luteal_phase"],"synonyms":[{"name":"luteal phase","type":"related"}],"termid":"GO:0001553"}


id: PATO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001170 numerical value (obsolete PATO:0001170)","termid":"PATO:0001170"}


id: MONDO:0000522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inflammatory myofibroblastic tumor (obsolete MONDO:0000522)","termid":"MONDO:0000522","xrefs":{"Monarch":{"xref_id":"0000522"}}}


id: GO:0019008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.","definition_xrefs":["PMID:12571227","GOC:mah","PMID:15709772"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdopterin synthase complex (obsolete GO:0019008)","synonyms":[{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:0019008"}


id: PBO:0049193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 4","termid":"PBO:0049193"}


id: PBO:0062405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 29 pseudogene","termid":"PBO:0062405"}


id: GO:0120003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A narrow rim of non-thickened membrane in between urothelial plaques in apical plasma membrane.","definition_xrefs":["GOC:krc","PMID:21887288","PMID:21468280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"apical plasma membrane","termid":"GO:0016324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"hinge region between urothelial plaques of apical plasma membrane","termid":"GO:0120003"}


id: GO:1905417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amoeboid sperm motility.","definition_xrefs":["GOC:TermGenie","GOC:cilia","GOC:krc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amoeboid sperm motility","termid":"GO:1905416"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"amoeboid sperm motility","termid":"GO:0097723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amoeboid sperm motility","synonyms":[{"name":"down regulation of ameboid sperm motility","type":"exact"},{"name":"down regulation of ameboid sperm movement","type":"exact"},{"name":"down regulation of amoeboid sperm motility","type":"exact"},{"name":"down regulation of amoeboid sperm movement","type":"exact"},{"name":"down-regulation of ameboid sperm motility","type":"exact"},{"name":"down-regulation of ameboid sperm movement","type":"exact"},{"name":"down-regulation of amoeboid sperm motility","type":"exact"},{"name":"down-regulation of amoeboid sperm movement","type":"exact"},{"name":"downregulation of ameboid sperm motility","type":"exact"},{"name":"downregulation of ameboid sperm movement","type":"exact"},{"name":"downregulation of amoeboid sperm motility","type":"exact"},{"name":"downregulation of amoeboid sperm movement","type":"exact"},{"name":"inhibition of ameboid sperm motility","type":"narrow"},{"name":"inhibition of ameboid sperm movement","type":"narrow"},{"name":"inhibition of amoeboid sperm motility","type":"narrow"},{"name":"inhibition of amoeboid sperm movement","type":"narrow"},{"name":"negative regulation of ameboid sperm motility","type":"exact"},{"name":"negative regulation of ameboid sperm movement","type":"exact"},{"name":"negative regulation of amoeboid sperm movement","type":"exact"}],"termid":"GO:1905417"}


id: GO:0052657
data:
  {"annotated_genes":["SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94099],"is_not":false,"summary":null,"term":"GO:0052657"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GMP + diphosphate = guanine + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["RHEA:25424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine phosphoribosyltransferase activity","termid":"GO:0106130"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"guanine phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01229","MetaCyc:GUANPRIBOSYLTRAN-RXN"],"synonyms":[{"name":"6-hydroxypurine phosphoribosyltransferase activity","type":"related"},{"name":"6-mercaptopurine phosphoribosyltransferase activity","type":"related"},{"name":"GMP pyrophosphorylase activity","type":"related"},{"name":"GPRT","type":"related"},{"name":"Transphosphoribosidase activity","type":"broad"},{"name":"guanine-hypoxanthine phosphoribosyltransferase activity","type":"broad"},{"name":"guanosine 5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"guanosine phosphoribosyltransferase activity","type":"related"},{"name":"guanylate pyrophosphorylase activity","type":"related"},{"name":"guanylic pyrophosphorylase activity","type":"related"},{"name":"hypoxanthine-guanine phosphoribosyltransferase activity","type":"broad"},{"name":"purine-6-thiol phosphoribosyltransferase activity","type":"related"}],"termid":"GO:0052657","terms_by_termid":{"GO:0052657":null}}


id: MONDO:0020780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy and hearing loss","termid":"MONDO:0014980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy and hearing loss 2","secondary_identifiers":["OMIM:618358","UMLS:C5193051","MEDGEN:1675017"],"synonyms":[{"name":"CONE-ROD DYSTROPHY AND HEARING LOSS 2","type":"related"},{"name":"CRDHL2","type":"related"}],"termid":"MONDO:0020780","xrefs":{"Monarch":{"xref_id":"0020780"}}}


id: MONDO:0016233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare lymphatic system malformation (obsolete MONDO:0016233)","secondary_identifiers":["Orphanet:211255","NANDO:1200881"],"termid":"MONDO:0016233","xrefs":{"Monarch":{"xref_id":"0016233"}}}


id: MOD:01435
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue, a glutamic acid residue and the indole compound 2-carboxy-3-methyl-4-hydroxymethyl--indole.","definition_xrefs":["RESID:AA0488","PubMed:893891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(cystein-S-ylcarbonyl)-3-methyl-4-(glutam-5-yloxy)methylindole","synonyms":[{"name":"2-([(1R)-1-amino-1-carboxyeth-2-yl]sulfanyl)carbonyl-3-methyl-4-([(1S)-1-amino-1-carboxy-4-oxobutan-4-yl]oxy)methyl-1H-indole","type":"exact"},{"name":"2-(cystein-S-ylcarbonyl)-3-methyl-4-(glutam-5-yloxy)methylindole","type":"exact"},{"name":"2-(cystein-S-ylcarbonyl)-4-[(glutam-5-yloxy)methyl]-3-methyl-1H-indole","type":"exact"},{"name":"BINDING 3-methyl-4-hydroxymethylindole-2-carboxylic acid (covalent; via 2 links)","type":"exact"}],"termid":"MOD:01435"}


id: GO:0075068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's vascular tissue. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host vascular tissue (obsolete GO:0075068)","synonyms":[{"name":"growth or development of symbiont in host vascular tissue","type":"exact"}],"termid":"GO:0075068"}


id: GO:0042322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the duration or quality of rapid eye movement (REM) sleep.","definition_xrefs":["GOC:go_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, REM sleep","termid":"GO:0042320"},{"relation_name":"is_a","term_name":"negative regulation of circadian sleep/wake cycle, sleep","termid":"GO:0042321"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, REM sleep","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, REM sleep","type":"narrow"},{"name":"negative regulation of REM sleep","type":"exact"}],"termid":"GO:0042322"}


id: GO:0021982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pineal gland over time from its initial formation until its mature state. The pineal gland is an endocrine gland that secretes melatonin and is involved in circadian rhythms.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pineal gland development","synonyms":[{"name":"epiphysis development","type":"exact"}],"termid":"GO:0021982"}


id: MONDO:0003898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myxoid chondrosarcoma occurring in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid chondrosarcoma","termid":"MONDO:0003681"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric myxoid chondrosarcoma","secondary_identifiers":["NCIT:C27377","MEDGEN:232065","UMLS:C1332984","DOID:6494"],"synonyms":[{"name":"childhood myxoid chondrosarcoma","type":"exact"},{"name":"myxoid chondrosarcoma of childhood","type":"exact"},{"name":"pediatric myxoid chondrosarcoma","type":"exact"}],"termid":"MONDO:0003898","xrefs":{"Monarch":{"xref_id":"0003898"}}}


id: MONDO:0013039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-M syndrome in which the cause of the disease is a mutation in the OBSL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-M syndrome","termid":"MONDO:0007477"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"3M syndrome 2","secondary_identifiers":["OMIM:612921","MESH:C567862","MEDGEN:414168","UMLS:C2752041","GARD:15591"],"synonyms":[{"name":"3-M syndrome 2","type":"exact"},{"name":"3-M syndrome caused by mutation in OBSL1","type":"exact"},{"name":"3M syndrome 2","type":"exact"},{"name":"3M2","type":"related"},{"name":"OBSL1 3-M syndrome","type":"exact"},{"name":"three M syndrome 2","type":"exact"},{"name":"three M syndrome type 2","type":"exact"}],"termid":"MONDO:0013039","xrefs":{"Monarch":{"xref_id":"0013039"}}}


id: PBO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI anchored protein (predicted)","termid":"PBO:0000064"}


id: PBO:0044176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catenin alpha like 1","termid":"PBO:0044176"}


id: MONDO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrofacial dysostosis (obsolete MONDO:0000760)","termid":"MONDO:0000760","xrefs":{"Monarch":{"xref_id":"0000760"}}}


id: PBO:0054165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1535","termid":"PBO:0054165"}


id: PR:Q9P7B4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADP-dependent 3-hydroxy acid dehydrogenase YdfG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent 3-hydroxy acid dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.03","secondary_identifiers":["UniProtKB:Q9P7B4"],"synonyms":[{"name":"L-allo-threonine dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ydfG","type":"exact"}],"termid":"PR:Q9P7B4"}


id: PBO:0062972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 4","termid":"PBO:0062972"}


id: MONDO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal growth of the cells that comprise the cranial nerves.","definition_xrefs":["NCIT:C2963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"},{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranial nerve neoplasm","secondary_identifiers":["DOID:338","ICD9:239.7","MESH:D003390","SCTID:126966009","MEDGEN:3263","UMLS:C0010267"],"synonyms":[{"name":"cranial nerve neoplasm","type":"exact"},{"name":"cranial nerve neoplasm (disease)","type":"exact"},{"name":"cranial nerve neoplasms","type":"exact"},{"name":"cranial nerve tumor","type":"exact"},{"name":"cranial nerve tumour","type":"exact"},{"name":"neoplasm of cranial nerve","type":"exact"},{"name":"neoplasm of the cranial nerve","type":"exact"},{"name":"tumor of cranial nerve","type":"exact"},{"name":"tumor of the cranial nerve","type":"exact"},{"name":"tumour of cranial nerve","type":"exact"},{"name":"tumour of the cranial nerve","type":"exact"}],"termid":"MONDO:0002633","xrefs":{"Monarch":{"xref_id":"0002633"}}}


id: FYPO:0007739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleolar ring disassembly begins later than normal. Nucleolar rings are structures located at the nucleolar periphery where several nuclear factors are reversibly aggregated and sequestered during acute heat stress. They normally disassemble upon removal of heat stress.","definition_xrefs":["PMID:33176152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of nucleolar ring disassembly","synonyms":[{"name":"delayed nucleolar ring disassembly","type":"exact"},{"name":"delayed nucleolar ring disassembly during recovery from heat shock","type":"exact"},{"name":"delayed onset of NuR disassembly","type":"exact"},{"name":"delayed onset of nucleolar ring disassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of nucleolar ring disassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007739"}


id: MONDO:0006507
data:
  {"annotated_genes":["SJAG_02117"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011417"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder characterized by iron accumulation in the tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemosiderosis","termid":"MONDO:0001436"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"disorder of iron metabolism and transport","termid":"MONDO:0017763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02117":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hereditary hemochromatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84481","DOID:2352","MESH:D006432","MEDGEN:140272","ICD10CM:E83.110","OMIMPS:235200","SCTID:35400008","SCTID:399187006","UMLS:C0392514"],"synonyms":[{"name":"diabetes bronze","type":"exact"},{"name":"haemochromatosis","type":"broad"},{"name":"hemochromatosis","type":"broad"},{"name":"hemochromatosis, hereditary","type":"exact"},{"name":"iron storage disorder","type":"exact"}],"termid":"MONDO:0006507","terms_by_termid":{"MONDO:0011417":null},"xrefs":{"Monarch":{"xref_id":"0006507"}}}


id: PBO:0048447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GBX2 and ASB18 antisense RNA 1","termid":"PBO:0048447"}


id: PBO:0090191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein, conserved in fungi plants and protozoa","termid":"PBO:0090191"}


id: SO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates early in S phase.","definition_xrefs":["PMID:9115207","PMID:23348837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early_origin_of_replication","synonyms":[{"name":"early origin","type":"exact"},{"name":"early origin of replication","type":"exact"},{"name":"early replication origin","type":"exact"}],"termid":"SO:0002140"}


id: MONDO:0100281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waldenstrom macroglobulinemia","termid":"MONDO:0100280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"macroglobulinemia, Waldenstrom, 1","secondary_identifiers":["UMLS:C1835192","MEDGEN:320546","OMIM:153600"],"synonyms":[{"name":"WM1","type":"exact"},{"name":"macroglobulinemia, Waldenstrom, somatic","type":"exact"},{"name":"macroglobulinemia, waldenstrom, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100281","xrefs":{"Monarch":{"xref_id":"0100281"}}}


id: GO:0038130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB4 on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16460914","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERBB4 signaling pathway","synonyms":[{"name":"ERBB4 signalling pathway","type":"exact"},{"name":"HER4 signaling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-4 signaling pathway","type":"exact"}],"termid":"GO:0038130"}


id: PBO:0061202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor pseudogene 2","termid":"PBO:0061202"}


id: MONDO:0025167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of pathologic syndromes found in avian species caused by reticuloendotheliosis virus. The distinct syndromes include non-neoplastic runting, acute neoplastic disease, and chronic neoplastic disease. Humans and mammals appear resistant.","definition_xrefs":["MESH:D055761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticuloendotheliosis, avian","synonyms":[{"name":"Avian Reticuloendothelioses","type":"related"},{"name":"Avian reticuloendotheliosis","type":"related"},{"name":"Reticuloendothelioses, Avian","type":"related"}],"termid":"MONDO:0025167","xrefs":{"Monarch":{"xref_id":"0025167"}}}


id: FYPO:0005912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling that occurs as part of meiosis I is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:19139281","GO:1905886","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal meiosis-specific chromatin remodeling","synonyms":[{"name":"normal chromatin remodeling during meiosis I","type":"exact"},{"name":"normal chromatin remodeling involved in meiosis I","type":"exact"},{"name":"normal meiotic nuclear division-specific chromatin remodeling","type":"exact"}],"termid":"FYPO:0005912"}


id: MOD:01990
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a glycinium (protonated glycine).","definition_xrefs":["ChEBI:64723","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated glycine (glycinium) residue","termid":"MOD:01990"}


id: PBO:0027458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_morphology","termid":"PBO:0027458"}


id: GO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric proximal tubule morphogenesis","termid":"GO:0072292"}


id: PBO:0064945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1 domain family member 2","termid":"PBO:0064945"}


id: PBO:0041844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAS1 domain containing 1","termid":"PBO:0041844"}


id: GO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a lysosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to lysosome","termid":"GO:0061462"}


id: MONDO:0022057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing, locally invasive neoplasm arising from tooth-forming tissues. It most often grows intraosseously in the mandible and less frequently in the maxilla. In a minority of cases it grows extraosseously in the gingiva. It is characterized by the presence of a fibrous stroma, epithelial cells with abundant eosinophilic cytoplasm, and amyloid material which is often calcified. Small tumors may be successfully treated with enucleation. Local resection is usually required for larger tumors. Recurrences have been reported in a minority of cases.","definition_xrefs":["NCIT:C54301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"calcifying epithelial odontogenic tumor","secondary_identifiers":["MESH:C537961","UMLS:C0334574","ICDO:9340/0","MEDGEN:87266"],"synonyms":[{"name":"CEOT","type":"related"},{"name":"Pindborg tumor","type":"exact"},{"name":"Pindborg tumour","type":"exact"},{"name":"calcifying epithelial odontogenic tumor","type":"exact"}],"termid":"MONDO:0022057","xrefs":{"Monarch":{"xref_id":"0022057"}}}


id: GO:2001226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chloride transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic anion transport","termid":"GO:1903792"},{"relation_name":"is_a","term_name":"regulation of chloride transport","termid":"GO:2001225"},{"relation_name":"negatively_regulates","term_name":"chloride transport","termid":"GO:0006821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of chloride transport","termid":"GO:2001226"}


id: GO:0045796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uptake of cholesterol into the blood by absorption from the intestine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intestinal cholesterol absorption","termid":"GO:0030300"},{"relation_name":"is_a","term_name":"negative regulation of intestinal lipid absorption","termid":"GO:1904730"},{"relation_name":"negatively_regulates","term_name":"intestinal cholesterol absorption","termid":"GO:0030299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal cholesterol absorption","synonyms":[{"name":"down regulation of cholesterol absorption","type":"exact"},{"name":"down-regulation of cholesterol absorption","type":"exact"},{"name":"downregulation of cholesterol absorption","type":"exact"},{"name":"inhibition of cholesterol absorption","type":"narrow"}],"termid":"GO:0045796"}


id: GO:0071942
data:
  {"annotated_genes":["SJAG_01887","SJAG_01049"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72580,73057],"is_not":false,"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"A nucleotide-excision repair complex that is involved in damage sensing during global genome nucleotide excision repair (GG-NER). It is part of the pre-incision (or initial recognition) complex bound to sites of DNA damage. In human, it is composed of XPC, RAD23B and CETN2.","definition_xrefs":["PMID:11279143","PMID:15964821","PMID:19941824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"XPC complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071942","terms_by_termid":{"GO:0071942":null}}


id: GO:0102180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol + NADH + O2 + H+ = 4alpha-formyl-stigmasta-7,24(241)-dien-3beta-ol + NAD + 2 H2O.","definition_xrefs":["GOC:pz","RHEA:59036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11936"],"termid":"GO:0102180"}


id: PBO:0046189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 3","termid":"PBO:0046189"}


id: FYPO:0007711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33723569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal number of Ssb1 foci","synonyms":[{"name":"normal number of RPA foci","type":"exact"},{"name":"normal number of Rad11 foci","type":"exact"},{"name":"normal number of Rpa1 foci","type":"exact"},{"name":"normal number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"normal number of Ssb1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007711"}


id: MONDO:0033545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 19","secondary_identifiers":["GARD:18370","OMIM:618972","MEDGEN:1770258","UMLS:C5436514","DOID:0070450"],"synonyms":[{"name":"MITOCHONDRIAL DNA DEPLETION SYNDROME 19","type":"related"},{"name":"MTDPS19","type":"related"}],"termid":"MONDO:0033545","xrefs":{"Monarch":{"xref_id":"0033545"}}}


id: MONDO:0020253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with a symptomatic strabismus (obsolete MONDO:0020253)","secondary_identifiers":["Orphanet:98683"],"termid":"MONDO:0020253","xrefs":{"Monarch":{"xref_id":"0020253"}}}


id: MONDO:0009592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal acroscyphodysplasia is an extremely rare form of metaphyseal dysplasia characterized by the distinctive radiological sign of cone-shaped upper tibial and lower femoral epiphyses embedded in large cup-shaped metaphyses, associated with short stature and micromelia. Upper limb involvement includes brachydactyly and phalangeal and metacarpal cone-shaped epiphyses. The association of metaphyseal acroscyphodysplasia with psychomotor delay and alopecia has also been reported in some cases.","definition_xrefs":["Orphanet:1240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal acroscyphodysplasia","secondary_identifiers":["UMLS:C1855243","MESH:C537350","icd11.foundation:1994645064","MEDGEN:344453","OMIM:250215","GARD:3519"],"synonyms":[{"name":"Bellini Chiumello Rimoldi syndrome","type":"related"},{"name":"Bellini syndrome","type":"exact"},{"name":"cupped metaphyses and cone-Shaped epiphyses of knees with brachydactyly","type":"related"},{"name":"intellectual disability-short stature-wedge-shaped epiphyses of knees syndrome","type":"exact"},{"name":"metaphyseal acroscyphodysplasia","type":"exact"},{"name":"wedge-Shaped epiphyses of knees","type":"related"},{"name":"wedge-shaped epiphyses of knees","type":"related"},{"name":"wedge-shaped epiphyses of the knees with intellectual disability and short stature","type":"related"},{"name":"wedge-shaped epiphyses of the knees with mental retardation and short stature","type":"related"}],"termid":"MONDO:0009592","xrefs":{"Monarch":{"xref_id":"0009592"}}}


id: GO:0050670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell proliferation","termid":"GO:0032944"},{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte proliferation","termid":"GO:0050670"}


id: MOD:01912
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of a residue with one bromine atom.","definition_xrefs":["Unimod:340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated residue","termid":"MOD:00754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated residue","synonyms":[{"name":"Br1Res","type":"exact"}],"termid":"MOD:01912"}


id: PR:O14100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zds1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein zds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31F12.01","synonyms":[{"name":"Spom972h-zds1","type":"exact"},{"name":"meiotically up-regulated gene 88 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14100"}


id: GO:0051687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the spindle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle localization","termid":"GO:0051653"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"maintenance of spindle location","synonyms":[{"name":"maintenance of spindle localization","type":"related"}],"termid":"GO:0051687"}


id: MONDO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the colon or rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C96160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine tumor G1","termid":"MONDO:0021533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:474244","UMLS:C3272611","EFO:1000195"],"synonyms":[{"name":"colorectal NET G1","type":"exact"},{"name":"colorectal carcinoid tumor","type":"exact"},{"name":"colorectal carcinoid tumour","type":"exact"},{"name":"colorectal neuroendocrine tumor G1","type":"exact"},{"name":"colorectum NET G1","type":"exact"},{"name":"colorectum carcinoid tumor","type":"exact"},{"name":"colorectum carcinoid tumour","type":"exact"},{"name":"colorectum neuroendocrine neoplasm G1","type":"exact"},{"name":"colorectum neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of colorectum","type":"exact"},{"name":"large intestinal neuroendocrine tumor G1","type":"exact"},{"name":"large intestinal neuroendocrine tumour G1","type":"exact"}],"termid":"MONDO:0006162","xrefs":{"Monarch":{"xref_id":"0006162"}}}


id: GO:0035393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-X-C motif) ligand 9 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"CXCL9 production","type":"exact"},{"name":"MIG production","type":"exact"},{"name":"Monokine induced by gamma interferon production","type":"exact"}],"termid":"GO:0035393"}


id: GO:0006686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin metabolic process","termid":"GO:0006684"},{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingomyelin biosynthetic process","synonyms":[{"name":"sphingomyelin anabolism","type":"exact"},{"name":"sphingomyelin biosynthesis","type":"exact"},{"name":"sphingomyelin formation","type":"exact"},{"name":"sphingomyelin synthesis","type":"exact"}],"termid":"GO:0006686"}


id: MONDO:0044937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm that arises from the rectum and invades through the muscularis mucosa into the submucosa. The vast majority are adenocarcinomas.","definition_xrefs":["NCIT:C9382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal cancer","termid":"MONDO:0006519"},{"relation_name":"is_a","term_name":"colorectal carcinoma","termid":"MONDO:0024331"},{"relation_name":"is_a","term_name":"epithelial neoplasm of rectum","termid":"MONDO:0024476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectal carcinoma","secondary_identifiers":["UMLS:C0007113","MEDGEN:40100"],"synonyms":[{"name":"cancer of rectum","type":"broad"},{"name":"cancer of the rectum","type":"broad"},{"name":"carcinoma of rectum","type":"exact"},{"name":"carcinoma of the rectum","type":"exact"},{"name":"rectal cancer","type":"broad"},{"name":"rectal carcinoma","type":"exact"},{"name":"rectum carcinoma","type":"exact"}],"termid":"MONDO:0044937","xrefs":{"Monarch":{"xref_id":"0044937"}}}


id: PBO:0034174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homoeology_relationship_with","termid":"PBO:0034174"}


id: PBO:0042300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8 subunit beta","termid":"PBO:0042300"}


id: MONDO:0013492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia - intellectual disability syndrome","termid":"MONDO:0008756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia-intellectual disability syndrome 3","secondary_identifiers":["DOID:0080951","OMIM:613930","MEDGEN:462712","UMLS:C3151362","GARD:15730"],"synonyms":[{"name":"APMR3","type":"exact"},{"name":"alopecia-intellectual disability syndrome 3","type":"exact"},{"name":"alopecia-mental retardation syndrome 3","type":"related"}],"termid":"MONDO:0013492","xrefs":{"Monarch":{"xref_id":"0013492"}}}


id: PBO:0086060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; null mutant exhibits translation defects, altered polyribosome profiles, and resistance to the translation inhibitor anisomcyin; protein abundance increases in response to DNA replication stress","termid":"PBO:0086060"}


id: PBO:0079312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 6","termid":"PBO:0079312"}


id: GO:1905365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["GOC:bc","GOC:TermGenie","PMID:26911690","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endosome organization","termid":"GO:1904978"},{"relation_name":"regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of intralumenal vesicle formation","synonyms":[{"name":"regulation of endosome membrane budding","type":"exact"}],"termid":"GO:1905365"}


id: GO:0098893
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic endocytic zone membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone membrane","termid":"GO:0098844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic endocytic zone","termid":"GO:0098893"}


id: PBO:0056468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 antisense RNA 1","termid":"PBO:0056468"}


id: PBO:0035791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2B-K119_ubiquitination_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035791"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: PBO:0054295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1686","termid":"PBO:0054295"}


id: GO:0141114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process by which a symbiont inhibits or disrupts the normal execution of the activation of complement in its host.","definition_xrefs":["PMID:25830295","PMID:20194595"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host complement activation (obsolete GO:0141114)","synonyms":[{"name":"suppression of complement activation by another organism","type":"broad"}],"termid":"GO:0141114"}


id: PBO:0043044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 1","termid":"PBO:0043044"}


id: PBO:0038469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 8","termid":"PBO:0038469"}


id: GO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell aging (obsolete GO:0090343)","termid":"GO:0090343"}


id: MONDO:0016150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of integrin alpha-7 (obsolete MONDO:0016150)","secondary_identifiers":["Orphanet:207098"],"synonyms":[{"name":"integrinopathy","type":"exact"}],"termid":"MONDO:0016150","xrefs":{"Monarch":{"xref_id":"0016150"}}}


id: PBO:0073098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 2","termid":"PBO:0073098"}


id: GO:0001172
data:
  {"annotated_genes":["SJAG_00119","SJAG_01313","SJAG_02101","SJAG_03356","SJAG_02070","SJAG_04894","SJAG_01436","SJAG_00458","SJAG_04030"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58267,58487,59517,60516,62655,63545,63786,64043,68335],"is_not":false,"summary":null,"term":"GO:0001172"}]},"cv_name":"biological_process","definition":"The synthesis of an RNA transcript from an RNA template.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00458":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_03356":null,"SJAG_04030":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA-templated transcription","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"transcription, RNA-dependent","type":"exact"},{"name":"transcription, RNA-templated","type":"exact"}],"termid":"GO:0001172","terms_by_termid":{"GO:0001172":null}}


id: MONDO:0044336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive colorectal adenocarcinoma characterized by the presence of malignant glandular epithelial cells with prominent intracytoplasmic mucin resulting in the displacement of the nuclei. The malignant glandular cells with intracytoplasmic mucin constitute more than 50% of the malignant cellular infiltrate.","definition_xrefs":["NCIT:C43586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenocarcinoma","termid":"MONDO:0005008"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal signet ring cell carcinoma","secondary_identifiers":["MEDGEN:313040","UMLS:C1707440"],"synonyms":[{"name":"colorectal signet Ring cell carcinoma","type":"exact"}],"termid":"MONDO:0044336","xrefs":{"Monarch":{"xref_id":"0044336"}}}


id: RO:HOM0000045
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is characterized by topological discordance between a gene tree and a species tree attributable to the phylogenetic sorting of genetic polymorphisms across successive nodes in a species tree.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_hemiplasy_relationship_with","synonyms":[{"name":"hemiplasous to","type":"exact"}],"termid":"RO:HOM0000045"}


id: PBO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 6 (pseudogene)","termid":"PBO:0044719"}


id: PBO:0109203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer kinetochore KNL network protein Sos7","termid":"PBO:0109203"}


id: GO:0010219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the vernalization response, by which induction of flowering is normally caused by extended exposure to cold temperatures.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"regulates","term_name":"vernalization response","termid":"GO:0010048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vernalization response","termid":"GO:0010219"}


id: _global:results_in_formation_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship linking a entity and its participation in a process whereby at the beginning of the process the entity does not exist and at the end of the process the entity exists.","definition_xrefs":["GOC:mtg_berkeley_2013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has_output","termid":"RO:0002234"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_output","termid":"_global:has_output"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_formation_of","secondary_identifiers":["GOREL:0001020","RO:0002297"],"termid":"_global:results_in_formation_of"}


id: SO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U3_LTR_region","termid":"SO:0000424"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_five_prime_LTR_region","synonyms":[{"name":"U3 5' long term repeat region","type":"exact"},{"name":"U3 five prime LTR region","type":"exact"}],"termid":"SO:0000429"}


id: MOD:01485
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["Unimod:532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(18)O isotope tagged reagent","termid":"MOD:01430"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 114","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ114","type":"related"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01485"}


id: MONDO:1011962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D-deficiency rickets, non-type I, non-type II, non-human animal","secondary_identifiers":["OMIA:001614"],"termid":"MONDO:1011962","xrefs":{"Monarch":{"xref_id":"1011962"}}}


id: PBO:0057706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1293","termid":"PBO:0057706"}


id: GO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"positively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pteridine metabolic process","synonyms":[{"name":"activation of pteridine metabolic process","type":"narrow"},{"name":"positive regulation of pteridine metabolism","type":"exact"},{"name":"stimulation of pteridine metabolic process","type":"narrow"},{"name":"up regulation of pteridine metabolic process","type":"exact"},{"name":"up-regulation of pteridine metabolic process","type":"exact"},{"name":"upregulation of pteridine metabolic process","type":"exact"}],"termid":"GO:0045864"}


id: PBO:0054542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1942","termid":"PBO:0054542"}


id: MONDO:0018411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare female infertility due to hypothalamic-pituitary-gonadal axis disorder that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare female infertility due to hypothalamic-pituitary-gonadal axis disorder of genetic origin (obsolete MONDO:0018411)","secondary_identifiers":["Orphanet:400011"],"synonyms":[{"name":"genetic rare female infertility due to hypothalamic-pituitary-gonadal axis disorder","type":"exact"},{"name":"rare female infertility due to gonadotropic axis disorder of genetic origin","type":"exact"},{"name":"rare female infertility due to hypothalamic-pituitary-testicular axis disorder of genetic origin","type":"exact"}],"termid":"MONDO:0018411","xrefs":{"Monarch":{"xref_id":"0018411"}}}


id: MONDO:0009546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrosomia adiposa congenita","secondary_identifiers":["MESH:C565425","MEDGEN:340875","UMLS:C1855468","OMIM:248100"],"synonyms":[{"name":"macrosomia adiposa congenita","type":"exact"}],"termid":"MONDO:0009546","xrefs":{"Monarch":{"xref_id":"0009546"}}}


id: PBO:0088426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion molecule with predicted signal peptide (predicted)","termid":"PBO:0088426"}


id: PBO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc53 (predicted)","termid":"PBO:0005708"}


id: PBO:0053668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 847","termid":"PBO:0053668"}


id: FYPO:0002792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, but smaller, vacuoles than normal during a cellular response to a hypotonic environment.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"output_of","term_name":"abnormal vacuole fusion during cellular hypotonic response","termid":"FYPO:0004483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during cellular hypotonic response","synonyms":[{"name":"fragmented vacuoles during cellular hypotonic response","type":"related"},{"name":"small vacuoles present in greater numbers during cellular hypotonic response","type":"exact"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during mitotic cell cycle","type":"related"},{"name":"small vacuoles present in increased numbers during cellular hypotonic response during vegetative growth","type":"exact"},{"name":"small vacuoles present in increased numbers during hypotonic stress","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002792"}


id: MONDO:0032748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 38","secondary_identifiers":["GARD:18409","OMIM:618433","MEDGEN:1680356","UMLS:C5193095","DOID:0111919"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 38","type":"related"},{"name":"SPGF38","type":"related"}],"termid":"MONDO:0032748","xrefs":{"Monarch":{"xref_id":"0032748"}}}


id: CHEBI:15741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinic acid","termid":"CHEBI:15741"}


id: PBO:0077607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 13","termid":"PBO:0077607"}


id: PBO:0046237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 31","termid":"PBO:0046237"}


id: GO:0033842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acetyl-beta-D-glucosaminyl derivative + UDP-N-acetyl-alpha-D-galactosamine = an N-acetyl-beta-D-galactosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl derivative + UDP + H+.","definition_xrefs":["RHEA:20493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"N-acetyl-beta-glucosaminyl-derivative 4-beta-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.244-RXN","EC:2.4.1.244"],"synonyms":[{"name":"N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity","type":"exact"},{"name":"UDP-N-acetyl-D-galactosamine:N-acetyl-D-glucosaminyl-group beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"beta1,4-N-acetylgalactosaminyltransferase III activity","type":"related"},{"name":"beta1,4-N-acetylgalactosaminyltransferase IV activity","type":"related"},{"name":"beta1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"beta4GalNAc-T3","type":"related"},{"name":"beta4GalNAc-T4","type":"related"}],"termid":"GO:0033842"}


id: PBO:0117144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain 3 tRNA guanosine methyltransferase","termid":"PBO:0117144"}


id: PBO:0028080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles","termid":"PBO:0028080"}


id: PBO:0003318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein (predicted)","termid":"PBO:0003318"}


id: PBO:0047402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 40","termid":"PBO:0047402"}


id: FYPO:0002768
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitination of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein ubiquitination during vegetative growth","termid":"FYPO:0000905"},{"relation_name":"is_a","term_name":"decreased protein ubiquitination","termid":"FYPO:0007946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein ubiquitination during vegetative growth","synonyms":[{"name":"decreased protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"decreased protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"decreased protein ubiquitylation during vegetative growth","type":"exact"},{"name":"reduced protein ubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0002768"}


id: PBO:0040683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 1","termid":"PBO:0040683"}


id: PBO:0053984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1300","termid":"PBO:0053984"}


id: PBO:0067135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 183, pseudogene","termid":"PBO:0067135"}


id: GO:0003781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin bundling activity (obsolete GO:0003781)","synonyms":[{"name":"actin bundling activity","type":"exact"}],"termid":"GO:0003781"}


id: GO:0032691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 beta production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 beta production","termid":"GO:0032651"},{"relation_name":"is_a","term_name":"negative regulation of interleukin-1 production","termid":"GO:0032692"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 beta production","termid":"GO:0032611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-1 beta production","secondary_identifiers":["GO:0050713","GO:0050724"],"synonyms":[{"name":"down regulation of interleukin-1 beta production","type":"exact"},{"name":"down-regulation of interleukin-1 beta production","type":"exact"},{"name":"downregulation of interleukin-1 beta production","type":"exact"},{"name":"inhibition of interleukin-1 beta production","type":"narrow"},{"name":"negative regulation of IL-1 beta production","type":"exact"},{"name":"negative regulation of interleukin-1 beta biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 beta secretion","type":"narrow"}],"termid":"GO:0032691"}


id: PBO:0030153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_telomere_tethering_at_nuclear_periphery","termid":"PBO:0030153"}


id: GO:0019625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide, into cyanuric acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrazine catabolic process","termid":"GO:0019381"},{"relation_name":"is_a","term_name":"cyanuric acid metabolic process","termid":"GO:0042199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process to cyanuric acid","synonyms":[{"name":"atrazine breakdown to cyanuric acid","type":"exact"},{"name":"atrazine degradation to cyanuric acid","type":"exact"}],"termid":"GO:0019625"}


id: PBO:0070463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 6","termid":"PBO:0070463"}


id: MONDO:0007084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial focal alopecia","secondary_identifiers":["MESH:C566301","OMIM:104110","MEDGEN:350835","UMLS:C1863092"],"synonyms":[{"name":"ALPF","type":"related"},{"name":"alopecia, familial focal","type":"exact"}],"termid":"MONDO:0007084","xrefs":{"Monarch":{"xref_id":"0007084"}}}


id: PBO:0071416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 22","termid":"PBO:0071416"}


id: MONDO:0017723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Sandhoff disease that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sandhoff disease","termid":"MONDO:0010006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0002525","MONDO:0005559","MONDO:0002561","MONDO:0002039","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"Sandhoff disease, adult form","secondary_identifiers":["Orphanet:309169","MEDGEN:148319","GARD:17405","UMLS:C0751489","SCTID:238020001"],"synonyms":[{"name":"Hexosaminidases A and B deficiency, adult form","type":"exact"},{"name":"Sandhoff disease of adults","type":"exact"},{"name":"adult GM2 gangliosidosis 0 variant","type":"exact"},{"name":"adult Sandhoff disease","type":"exact"}],"termid":"MONDO:0017723","xrefs":{"Monarch":{"xref_id":"0017723"}}}


id: PBO:0048779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine monophosphate synthase pseudogene 1","termid":"PBO:0048779"}


id: MONDO:0019141
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87450,87451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"}]},"cv_name":"mondo","definition":"Porokeratosis of Mibelli (PM) is a form of porokeratosis that is characterized by the presence of brown single or multiple annular plaques of varying size, that are sometimes confluent, with a distinctive sharply-defined keratotic border.","definition_xrefs":["Orphanet:735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis of Mibelli","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:181842","GARD:4438","ICD9:757.39","SCTID:80432009","UMLS:C0949506"],"termid":"MONDO:0019141","terms_by_termid":{"MONDO:0008293":null},"xrefs":{"Monarch":{"xref_id":"0019141"}}}


id: GO:0097285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any apoptotic process in a specific cell type.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cell-type specific apoptotic process (obsolete GO:0097285)","synonyms":[{"name":"cell-type specific apoptosis","type":"narrow"}],"termid":"GO:0097285"}


id: PBO:0041432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 89","termid":"PBO:0041432"}


id: SO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:078"],"synonyms":[{"name":"5-carboxymethylaminomethyl- 2'-O-methyluridine","type":"exact"},{"name":"cmnm5Um","type":"exact"},{"name":"five carboxymethylaminomethyl two prime O methyluridine","type":"exact"}],"termid":"SO:0001370"}


id: GO:0001651
data:
  {"annotated_genes":["SJAG_00259"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89164],"is_not":false,"summary":null,"term":"GO:0001651"}]},"cv_name":"cellular_component","definition":"A structure found in the nucleolus, which contains newly synthesized preribosomal RNA (pre-rRNA) and a collection of proteins.","definition_xrefs":["PMID:10754561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005730","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"dense fibrillar component","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1841764412"],"synonyms":[{"name":"pars fibrosa","type":"broad"}],"termid":"GO:0001651","terms_by_termid":{"GO:0001651":null}}


id: MONDO:0013362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC6-related developmental delay-microcephaly-facial dysmorphism syndrome","secondary_identifiers":["OMIM:613680","Orphanet:363444","UMLS:C3150939","MEDGEN:462289","GARD:17558"],"synonyms":[{"name":"BBIS","type":"exact"},{"name":"BEAULIEU-BOYCOTT-Innes syndrome","type":"related"},{"name":"Beaulieu-Boycott-Innes syndrome","type":"exact"},{"name":"microcephaly, intellectual disability, and distinctive facies, with Cardiac and genitourinary malformations","type":"related"},{"name":"microcephaly, mental retardation, and distinctive facies, with Cardiac and genitourinary malformations","type":"related"}],"termid":"MONDO:0013362","xrefs":{"Monarch":{"xref_id":"0013362"}}}


id: FYPO:0002446
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to oxidative stress","termid":"FYPO:0007620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to H2O2","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0002446"}


id: MONDO:0009337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hennekam syndrome in which the cause of the disease is a mutation in the CCBE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hennekam syndrome","termid":"MONDO:0016256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Hennekam lymphangiectasia-lymphedema syndrome 1","secondary_identifiers":["UMLS:C4012050","OMIM:235510","GARD:15181","MEDGEN:860487"],"synonyms":[{"name":"CCBE1 Hennekam syndrome","type":"exact"},{"name":"HKLLS1","type":"related"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome","type":"related"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome 1","type":"exact"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome type 1","type":"exact"},{"name":"Hennekam syndrome caused by mutation in CCBE1","type":"exact"},{"name":"lymphatic dysplasia, generalised","type":"related"},{"name":"lymphatic dysplasia, generalized","type":"related"}],"termid":"MONDO:0009337","xrefs":{"Monarch":{"xref_id":"0009337"}}}


id: GO:1900184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"negatively_regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"down regulation of xanthone biosynthesis","type":"narrow"},{"name":"down regulation of xanthone biosynthetic process","type":"narrow"},{"name":"down regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"down regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"down regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"down regulation of xanthone-containing compound formation","type":"exact"},{"name":"down regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"down-regulation of xanthone biosynthesis","type":"narrow"},{"name":"down-regulation of xanthone biosynthetic process","type":"narrow"},{"name":"down-regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"down-regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"down-regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"down-regulation of xanthone-containing compound formation","type":"exact"},{"name":"down-regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"downregulation of xanthone biosynthesis","type":"narrow"},{"name":"downregulation of xanthone biosynthetic process","type":"narrow"},{"name":"downregulation of xanthone-containing compound anabolism","type":"exact"},{"name":"downregulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"downregulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"downregulation of xanthone-containing compound formation","type":"exact"},{"name":"downregulation of xanthone-containing compound synthesis","type":"exact"},{"name":"inhibition of xanthone biosynthesis","type":"narrow"},{"name":"inhibition of xanthone biosynthetic process","type":"narrow"},{"name":"inhibition of xanthone-containing compound anabolism","type":"exact"},{"name":"inhibition of xanthone-containing compound biosynthesis","type":"exact"},{"name":"inhibition of xanthone-containing compound biosynthetic process","type":"narrow"},{"name":"inhibition of xanthone-containing compound formation","type":"exact"},{"name":"inhibition of xanthone-containing compound synthesis","type":"exact"},{"name":"negative regulation of xanthone biosynthesis","type":"narrow"},{"name":"negative regulation of xanthone biosynthetic process","type":"narrow"},{"name":"negative regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"negative regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"negative regulation of xanthone-containing compound formation","type":"exact"},{"name":"negative regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"negative regulation of xanthones anabolism","type":"exact"}],"termid":"GO:1900184"}


id: SO:1000036
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous nucleotide sequence is inverted in the same position.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion","secondary_identifiers":["loinc:LA6689-9"],"synonyms":[{"name":"inversion","type":"exact"}],"termid":"SO:1000036"}


id: MONDO:0019835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune-mediated inflammation of the pituitary gland often associated with other autoimmune diseases (e.g., hashimoto disease; graves disease; and addison disease).","definition_xrefs":["MESH:D000069281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"acquired pituitary hormone deficiency","termid":"MONDO:0019832"},{"relation_name":"is_a","term_name":"hypophysitis","termid":"MONDO:0021156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary hypophysitis","secondary_identifiers":["UMLS:C0342410","GARD:19281","ICD9:279.49","ICD9:253.8","NCIT:C132055","Orphanet:95506","MEDGEN:575013","SCTID:237706000"],"synonyms":[{"name":"autoimmune hypophysitis","type":"exact"},{"name":"lymphocytic hypophysitis","type":"exact"}],"termid":"MONDO:0019835","xrefs":{"Monarch":{"xref_id":"0019835"}}}


id: GO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smaller branches of an axon that emanate from the main axon cylinder.","definition_xrefs":["NIF_Subcellular:sao1470140754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon collateral","termid":"GO:0044303"}


id: PBO:0056474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2 non-catalytic beta subunit","termid":"PBO:0056474"}


id: GO:0032402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of melanosomes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanosome localization","termid":"GO:0032400"},{"relation_name":"is_a","term_name":"establishment of melanosome localization","termid":"GO:0032401"},{"relation_name":"is_a","term_name":"pigment granule transport","termid":"GO:0051904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"melanosome transport","termid":"GO:0032402"}


id: GO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a neurotransmitter into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"positively_regulates","term_name":"neurotransmitter uptake","termid":"GO:0001504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of neurotransmitter uptake","synonyms":[{"name":"activation of neurotransmitter uptake","type":"narrow"},{"name":"positive regulation of neurotransmitter import","type":"exact"},{"name":"stimulation of neurotransmitter uptake","type":"narrow"},{"name":"up regulation of neurotransmitter uptake","type":"exact"},{"name":"up-regulation of neurotransmitter uptake","type":"exact"},{"name":"upregulation of neurotransmitter uptake","type":"exact"}],"termid":"GO:0051582"}


id: GO:0004248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage where P1', P2' and P3' are hydrophobic residues.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete stromelysin 1 activity (obsolete GO:0004248)","synonyms":[{"name":"MMP-3","type":"exact"},{"name":"collagen-activating protein","type":"related"},{"name":"collagenase activating protein","type":"related"},{"name":"matrix metalloproteinase 3 activity","type":"related"},{"name":"neutral proteoglycanase activity","type":"related"},{"name":"procollagenase activator","type":"related"},{"name":"proteoglycanase activity","type":"related"},{"name":"stromelysin","type":"related"},{"name":"stromelysin 1 activity","type":"exact"},{"name":"transin activity","type":"related"}],"termid":"GO:0004248"}


id: GO:1900442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:1900440"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900743"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to neutral pH","type":"exact"}],"termid":"GO:1900442"}


id: MONDO:0012737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the SCN4B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 10","secondary_identifiers":["UMLS:C2678484","DOID:0110651","MEDGEN:394836","OMIM:611819","GARD:10436","MESH:C567514"],"synonyms":[{"name":"LQT10","type":"exact"},{"name":"SCN4B long QT syndrome","type":"exact"},{"name":"atrial fibrillation, familial, 17","type":"related"},{"name":"long QT syndrome 10","type":"exact"},{"name":"long QT syndrome caused by mutation in SCN4B","type":"exact"},{"name":"long QT syndrome type 10","type":"exact"}],"termid":"MONDO:0012737","xrefs":{"Monarch":{"xref_id":"0012737"}}}


id: GO:0102997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + progesterone + NADPH = 5beta-pregnane-3,20-dione + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete progesterone 5beta- reductase activity (obsolete GO:0102997)","termid":"GO:0102997"}


id: PBO:0072600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSF1 intronic transcript 1","termid":"PBO:0072600"}


id: MONDO:0008211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoleprechaunism syndrome, Patterson type is a rare, genetic, adrenal disorder characterized by congenital bronzed hyperpigmentation, cutis laxa of the hands and feet, body disproportion (comprising large hands, feet, nose and ears), hirsutism and severe intellectual disability. Patients additionally present hyperadrenocorticism, cushingoid features, premature adrenarche and diabetes mellitus, as well as skeletal deformities (not present at birth and which progress with age). There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:2976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoleprechaunism syndrome, Patterson type","secondary_identifiers":["OMIM:169170","MEDGEN:358350","MESH:C536310","UMLS:C1868546","GARD:4259"],"synonyms":[{"name":"Patterson pseudoleprechaunism syndrome","type":"related"},{"name":"Patterson syndrome","type":"exact"},{"name":"Patterson's leprechaunoid syndrome","type":"related"}],"termid":"MONDO:0008211","xrefs":{"Monarch":{"xref_id":"0008211"}}}


id: MONDO:0034670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic postaxial polydactyly (obsolete MONDO:0034670)","secondary_identifiers":["Orphanet:498467"],"termid":"MONDO:0034670","xrefs":{"Monarch":{"xref_id":"0034670"}}}


id: GO:1902041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["GOC:TermGenie","PMID:17245429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","secondary_identifiers":["Reactome:R-HSA-3371378"],"synonyms":[{"name":"regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902041"}


id: GO:0003356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency of cilium movement, the directed, self-propelled movement of a cilium.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cilium beat frequency","secondary_identifiers":["GO:0036144"],"synonyms":[{"name":"regulation of flagellum beat frequency","type":"related"},{"name":"regulation of microtubule-based flagellum beat frequency","type":"exact"}],"termid":"GO:0003356"}


id: PBO:0084633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2634 methylation of the 25S rRNA; S-adenosylmethionine-dependent; associates with precursors of the 60S ribosomal subunit; predicted to be involved in ribosome biogenesis","termid":"PBO:0084633"}


id: PR:P52808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P52808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L30-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.03c","synonyms":[{"name":"L32 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3001","type":"exact"}],"termid":"PR:P52808"}


id: GO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"}


id: SO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A uORF beginning with a codon other than AUG.","definition_xrefs":["PMID:26684391","PMID:27313038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uORF","termid":"SO:0002027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_AUG_initiated_uORF","synonyms":[{"name":"non AUG initiated uORF","type":"exact"}],"termid":"SO:0002151"}


id: PATO:0000779
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000779 absolute locomotor activity value (obsolete PATO:0000779)","termid":"PATO:0000779"}


id: PBO:0052172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 3","termid":"PBO:0052172"}


id: PBO:0047789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 6","termid":"PBO:0047789"}


id: PBO:0091649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin, involved in actin cytoskeleton organization","termid":"PBO:0091649"}


id: PBO:0076723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional and immune response regulator","termid":"PBO:0076723"}


id: PBO:0090590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-amylase homolog Aah3","termid":"PBO:0090590"}


id: PBO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retromer complex subunit Vps35","termid":"PBO:0005569"}


id: PBO:0004888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stm1 homolog (predicted)","termid":"PBO:0004888"}


id: PR:O74372
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- duo1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit duo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.08c","synonyms":[{"name":"Spom972h-duo1","type":"exact"},{"name":"outer kinetochore protein duo1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74372"}


id: GO:1990430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein that is part of an extracellular matrix.","definition_xrefs":["PMID:22355679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix protein binding","termid":"GO:1990430"}


id: FYPO:0004776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular threonine level","termid":"FYPO:0001565"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar threonine level","synonyms":[{"name":"increased level of threonine in vacuole","type":"exact"},{"name":"increased vacuolar L-threonine level","type":"exact"},{"name":"increased vacuolar threonine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar threonine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004776"}


id: GO:0015565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of threonine from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-threonine transmembrane transporter activity","termid":"GO:0015195"},{"relation_name":"is_a","term_name":"L-amino acid efflux transmembrane transporter activity","termid":"GO:0034639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"threonine efflux transmembrane transporter activity","synonyms":[{"name":"threonine efflux permease activity","type":"exact"},{"name":"threonine export protein","type":"related"},{"name":"threonine export transporter activity","type":"exact"}],"termid":"GO:0015565"}


id: PBO:0051199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-17 (non-functional)","termid":"PBO:0051199"}


id: PBO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport","termid":"PBO:0031219"}


id: MONDO:0100272
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"}]},"cv_name":"mondo","definition":"Any peroxisome biogenesis disorder in which the cause of the disease is a mutation in the PEX7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"non-Zellweger spectrum disorder","termid":"MONDO:0100322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0019053","MONDO:0005066","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX7 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX7 related peroxisome biogenesis disorder","type":"exact"},{"name":"adult refsum disease due to PEX7 defect (formerly)","type":"narrow"},{"name":"rhizomelic chondrodysplasia punctata type 1 (formerly)","type":"narrow"}],"termid":"MONDO:0100272","terms_by_termid":{"MONDO:0008972":null},"xrefs":{"Monarch":{"xref_id":"0100272"}}}


id: GO:0052086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont interferes with, inhibits or disrupts the normal execution of the B-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host adaptive immune response","termid":"GO:0039504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host B-cell mediated immune response","secondary_identifiers":["GO:0052281"],"synonyms":[{"name":"down regulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"down-regulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"downregulation by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"inhibition by symbiont of host B-cell mediated immune response","type":"narrow"},{"name":"negative regulation by organism of B-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"suppression by symbiont of host B-cell mediated immune response","type":"exact"},{"name":"suppression of host B-cell mediated immune response","type":"exact"}],"termid":"GO:0052086"}


id: MONDO:0023873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Noonan-like/multiple giant cell lesion syndrome (NS/MGCLS) is a term used to describe a subgroup of people with Noonan syndrome who also have giant cell lesions (benign tumor-like lesions that most frequently occur in the jaws but may also affect other bones or soft tissues) and resemble individuals who have cherubism. Although NS/MGCLS was once believed to be a separate condition, it is now known to bepart of the Noonan syndrome spectrum. Mutations in the PTPN11 and SOS1 genes have been associated with NS/MGCLS; however, mutations in these genes do not always cause giant cell lesions. One family with NS/MGCLS has been found to have a mutation in the PTPN11 gene butno giant cell lesions, suggesting that other genetic factors may be involved in leading to giant cell development. Multiple giant cell lesions associated with NS may resolve after puberty with variable restoration of the facial structure.","definition_xrefs":["GARD:0004006"],"gene_count":0,"genotype_count":0,"name":"obsolete Noonan-like/multiple giant cell lesion syndrome (obsolete MONDO:0023873)","secondary_identifiers":["OMIM:163955"],"synonyms":[{"name":"NL/MGCLS","type":"related"}],"termid":"MONDO:0023873","xrefs":{"Monarch":{"xref_id":"0023873"}}}


id: GO:0071385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"}


id: PBO:0084560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Mba1p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with the mitochondrial large ribosomal subunit and nascent polypeptide chains; null mutant displays increased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084560"}


id: PBO:0081582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 511","termid":"PBO:0081582"}


id: MONDO:0005250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammatory process that involves the chorionic villi (villitis) of the placenta.","definition_xrefs":["EFO:0003110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of extraembryonic membrane","termid":"MONDO:0045013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placental villitis","secondary_identifiers":["UMLS:C1270169","SCTID:388604008","MEDGEN:693918"],"termid":"MONDO:0005250","xrefs":{"Monarch":{"xref_id":"0005250"}}}


id: MONDO:0100204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with parainfluenza virus type 2.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent","PMID:27197630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parainfluenza infectious disease","termid":"MONDO:0100197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parainfluenza virus type 2 infectious disease","synonyms":[{"name":"human rubulavirus 2 infectious disease","type":"exact"},{"name":"infection caused by human parainfluenza virus 2","type":"exact"},{"name":"infection due to human parainfluenza virus 2","type":"exact"}],"termid":"MONDO:0100204","xrefs":{"Monarch":{"xref_id":"0100204"}}}


id: MONDO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kleine-Levin syndrome (obsolete MONDO:0000692)","termid":"MONDO:0000692","xrefs":{"Monarch":{"xref_id":"0000692"}}}


id: PBO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A9 pseudogene 1","termid":"PBO:0060722"}


id: PBO:0054993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2408","termid":"PBO:0054993"}


id: MONDO:0006793
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"Disease of the glandular, anterior portion of the pituitary (pituitary gland, anterior) resulting in hypersecretion of adenohypophyseal hormones such as growth hormone; prolactin; thyrotropin; luteinizing hormone; follicle stimulating hormone ; and adrenocorticotropic hormone. Hyperpituitarism usually is caused by a functional adenoma.","definition_xrefs":["MESH:D006964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior pituitary gland disorder","termid":"MONDO:0024468"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"hyperpituitarism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:10649000","MedDRA:10020716","DOID:2444","ICD9:253.1","MEDGEN:43783","UMLS:C0020506","EFO:1000973"],"termid":"MONDO:0006793","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0006793"}}}


id: PBO:0078911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 2-1","termid":"PBO:0078911"}


id: PBO:0068522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 117, pseudogene","termid":"PBO:0068522"}


id: GO:0044595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 3-decaprenyl-4,5-dihydroxybenzoate = S-adenosyl-L-homocysteine + 3-decaprenyl-4-hydroxy-5-methoxybenzoate.","definition_xrefs":["PMID:10777520"],"gene_count":0,"genotype_count":0,"name":"obsolete decaprenyldihydroxybenzoate methyltransferase activity (obsolete GO:0044595)","termid":"GO:0044595"}


id: PBO:0053120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 10","termid":"PBO:0053120"}


id: PBO:0054612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2017","termid":"PBO:0054612"}


id: PBO:0003736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd3","termid":"PBO:0003736"}


id: GO:0102245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lupan-3beta,20-diol = (S)-2,3-epoxysqualene + H2O.","definition_xrefs":["GOC:pz","EC:4.2.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lupan-3beta,20-diol synthase activity","secondary_identifiers":["RHEA:31351","MetaCyc:RXN-12338"],"termid":"GO:0102245"}


id: PR:O13290
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic dynein 1 heavy chain 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01915","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.06c","secondary_identifiers":["UniProtKB:O13290"],"synonyms":[{"name":"DYHC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-DYNC1H1","type":"exact"},{"name":"dynein heavy chain, cytosolic (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13290"}


id: PBO:0027894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_methyltransferase_activity_(H3-K4_specific)","termid":"PBO:0027894"}


id: PATO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's independence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic","termid":"PATO:0001456"}


id: GO:1900129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein activated inward rectifier potassium channel activity (obsolete GO:1900129)","synonyms":[{"name":"activation of G protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-activated inward rectifier potassium channel activity","type":"narrow"},{"name":"activation of G-protein-enhanced inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"positive regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein enhanced inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-activated inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of G-protein-enhanced inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1900129"}


id: PBO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_potential_to_developmentally_induce","termid":"PBO:0034177"}


id: PBO:0079919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein pseudogene 4","termid":"PBO:0079919"}


id: MONDO:0018786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pontine autosomal dominant microangiopathy with leukoencephalopathy (obsolete MONDO:0018786)","termid":"MONDO:0018786","xrefs":{"Monarch":{"xref_id":"0018786"}}}


id: GO:0003334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a keratinocyte over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"keratinocyte differentiation","termid":"GO:0030216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte development","secondary_identifiers":["Reactome:R-HSA-9725554"],"termid":"GO:0003334"}


id: GO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that inhibits the signaling function of a G protein-coupled receptor by uncoupling the receptor from its downstream G proteins.","definition_xrefs":["PMID:8396717","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete desensitization of G protein-coupled receptor signaling pathway by arrestin (obsolete GO:0002032)","synonyms":[{"name":"arrestin mediated desensitisation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"arrestin mediated desensitization of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"arrestin-mediated desensitization of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"desensitization of G-protein coupled receptor protein signaling pathway by arrestin","type":"exact"}],"termid":"GO:0002032"}


id: GO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C2 complex (obsolete GO:0005603)","synonyms":[{"name":"complement component C2 complex","type":"exact"}],"termid":"GO:0005603"}


id: GO:0102872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-palmitoyl-2-linoleoyl-phosphatidylcholine + O2 + a reduced electron acceptor = 1-16:0-2-18:3-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["PMID:8102138","GOC:pz","PMID:15538555"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-16:0-2-18:2-phosphatidylcholine desaturase activity (obsolete GO:0102872)","termid":"GO:0102872"}


id: MONDO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutation in the LMF1 gene resulting in combined lipase deficiency with concomitant hypertriglyceridemia and associated disorders.","definition_xrefs":["NCIT:C126558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"familial chylomicronemia syndrome","termid":"MONDO:0018637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"lipase deficiency, combined","secondary_identifiers":["MEDGEN:340886","MESH:C535904","OMIM:246650","DOID:0111422","UMLS:C1855498","GARD:10244","Orphanet:535453"],"synonyms":[{"name":"LPL and HL deficiency","type":"related"},{"name":"LPL and HTGL deficiency","type":"related"},{"name":"combined lipase deficiency","type":"exact"},{"name":"familial lipase maturation factor 1 deficiency","type":"exact"},{"name":"lipase deficiency combined","type":"related"},{"name":"lipase deficiency, combined","type":"exact"},{"name":"lipoprotein lipase deficiency with hepatic triglyceride lipase deficiency","type":"related"}],"termid":"MONDO:0009527","xrefs":{"Monarch":{"xref_id":"0009527"}}}


id: PBO:0053379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 305","termid":"PBO:0053379"}


id: FYPO:0004957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the mitochondrion differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"},{"relation_name":"is_a","term_name":"abnormal mitochondrion","termid":"FYPO:0004943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of substance in mitochondrion","synonyms":[{"name":"abnormal level of substance in mitochondrion","type":"exact"},{"name":"abnormal level of substance in mitochondrion during vegetative growth","type":"exact"},{"name":"abnormal mitochondrial level of substance","type":"exact"},{"name":"altered level of substance in mitochondrion during mitotic cell cycle","type":"related"},{"name":"altered mitochondrial level of substance","type":"exact"}],"termid":"FYPO:0004957"}


id: FYPO:0005498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more CRE elements occurs to a greater extent than normal during a cellular response to miconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription from CRE promoter","termid":"FYPO:0005495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased transcription from CRE promoter during cellular response to miconazole","synonyms":[{"name":"expression of CRE target genes increased during cellular response to miconazole","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during mitotic cell cycle","type":"related"},{"name":"increased transcription from CRE promoter during cellular response to miconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0005498"}


id: GO:0046465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dolichyl diphosphate, a diphosphorylated dolichol derivative. In eukaryotes, these function as carriers of mono- and oligosaccharide residues in the glycosylation of lipids and proteins within intracellular membranes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"dolichyl diphosphate metabolic process","synonyms":[{"name":"dolichyl diphosphate metabolism","type":"exact"}],"termid":"GO:0046465"}


id: PBO:0003113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M transition checkpoint protein Sum2","termid":"PBO:0003113"}


id: PBO:0059959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 4","termid":"PBO:0059959"}


id: PBO:0064172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group VI","termid":"PBO:0064172"}


id: MONDO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated scaphocephaly is a form of nonsyndromic craniosynostosis characterized by premature fusion of the sagittal suture.","definition_xrefs":["Orphanet:35093"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"}],"gene_count":0,"genotype_count":0,"name":"obsolete isolated scaphocephaly (obsolete MONDO:0018112)","secondary_identifiers":["NANDO:2201302"],"synonyms":[{"name":"isolated dolichocephaly","type":"exact"},{"name":"non-syndromic sagittal synostosis","type":"exact"}],"termid":"MONDO:0018112","xrefs":{"Monarch":{"xref_id":"0018112"}}}


id: PBO:0083536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YAP1802/YGR241C","termid":"PBO:0083536"}


id: GO:0120181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a focal adhesion into its constituent components. A focal adhesion is a complex of intracellular signaling and structural proteins that provides a structural link between the internal actin cytoskeleton and the ECM, and also functions as a locus of signal transduction activity.","definition_xrefs":["PMID:25490267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction disassembly","termid":"GO:0120180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"focal adhesion disassembly","termid":"GO:0120181"}


id: MONDO:0010297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any FG syndrome in which the cause of the disease is a mutation in the FLNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 2","secondary_identifiers":["UMLS:C1845902","OMIM:300321","MEDGEN:337461"],"synonyms":[{"name":"FG syndrome 2","type":"exact"},{"name":"FG syndrome caused by mutation in FLNA","type":"exact"},{"name":"FG syndrome type 2","type":"exact"},{"name":"FGS2","type":"related"},{"name":"FLNA FG syndrome","type":"exact"}],"termid":"MONDO:0010297","xrefs":{"Monarch":{"xref_id":"0010297"}}}


id: GO:0010823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a mitochondrion.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitochondrion organization (obsolete GO:0010823)","synonyms":[{"name":"negative regulation of mitochondrion organisation","type":"exact"}],"termid":"GO:0010823"}


id: PBO:0041357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement component 4 binding protein alpha","termid":"PBO:0041357"}


id: PBO:0074638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 31","termid":"PBO:0074638"}


id: GO:0141115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont disrupts or prematurely activates host complement so that its microbial-destroying activities fail.","definition_xrefs":["PMID:34305859","PMID:24312361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host complement activation","termid":"GO:0042784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host complement activation by inactivation of complement proteins","synonyms":[{"name":"suppression of complement activation by another organism by inactivation of complement proteins","type":"broad"}],"termid":"GO:0141115"}


id: PBO:0026703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_tryptophan_level","termid":"PBO:0026703"}


id: PBO:0116683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 14","termid":"PBO:0116683"}


id: GO:0035184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a threonine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone threonine kinase activity (obsolete GO:0035184)","synonyms":[{"name":"histone-threonine kinase activity","type":"exact"}],"termid":"GO:0035184"}


id: SO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene segment which when incorporated by somatic recombination in the final gene transcript results in a nonfunctional product.","definition_xrefs":["SO:hd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_segment","termid":"SO:3000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_gene_segment","synonyms":[{"name":"pseudogenic gene segment","type":"exact"}],"termid":"SO:0001741"}


id: GO:0016611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing an iron-iron cluster found in species such as the photosynthetic bacterium Rhodobacter capsulatus. It is composed of two main subunits, dinitrogenase and nitrogenase reductase. Dinitrogenase, the iron-iron containing subunit, has an alpha1-beta2 or alpha2-beta2 structure, and the nitrogenase reductase subunit is a homodimer. Functions in the catalysis of the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["PMID:11848850","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"iron-iron nitrogenase complex","termid":"GO:0016611"}


id: PBO:0051155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-35 (non-functional)","termid":"PBO:0051155"}


id: GO:1990701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the ERGIC membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane (obsolete GO:1990701)","synonyms":[{"name":"integral component of ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"integral component of ERGIC membrane","type":"exact"},{"name":"integral component of endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990701"}


id: PBO:0113343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein phosphatase required for mitotic exit; required for rDNA segregation, cytokinesis, meiosis I spindle disassembly, environmental stress response, autophagy during meiosis; downregulates microautophagy induction after TORC1 inactivation; held in nucleolus by Cdc55p in early meiosis, liberated by FEAR and Mitotic Exit Network in anaphase; sequestered in metaphase II, released upon entry into anaphase II; human homolog CDC14A can complement thermosensitivity of cdc14-1 mutant","termid":"PBO:0113343"}


id: MONDO:0014430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the FBXO31 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 45","secondary_identifiers":["GARD:22567","DOID:0081209","MEDGEN:863301","UMLS:C4014864","OMIM:615979"],"synonyms":[{"name":"FBXO31 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT45","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in FBXO31","type":"exact"},{"name":"intellectual disability, autosomal recessive 45","type":"exact"},{"name":"intellectual disability, autosomal recessive type 45","type":"exact"},{"name":"mental retardation, autosomal recessive 45","type":"related"},{"name":"mental retardation, autosomal recessive type 45","type":"exact"}],"termid":"MONDO:0014430","xrefs":{"Monarch":{"xref_id":"0014430"}}}


id: PBO:0082338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant","termid":"PBO:0082338"}


id: FYPO:0002966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"},{"relation_name":"is_a","term_name":"normal protein localization during mitosis","termid":"FYPO:0004328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle","synonyms":[{"name":"normal protein localisation to mitotic spindle","type":"exact"},{"name":"normal protein localization to mitotic spindle during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002966"}


id: MONDO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor usually arising in the synovium of joints, bursa or tendon sheath. It is characterized by the presence of mononuclear cells, multinucleated osteoclast-like giant cells, hemosiderin-laden macrophages, foam cells, and an inflammatory infiltrate. According to the growth pattern, it is classified as localized or diffuse.","definition_xrefs":["NCIT:C3402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant cell tumor","termid":"MONDO:0002171"},{"relation_name":"is_a","term_name":"synovium neoplasm","termid":"MONDO:0002528"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"tendon sheath disorder","termid":"MONDO:0024876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenosynovial giant cell tumor","secondary_identifiers":["SCTID:310605004","ICD9:727.02","UMLS:C1318543","ICD9:727.89","DOID:314","ICDO:9252/0","MEDGEN:232927","EFO:1000562","SCTID:95412009"],"synonyms":[{"name":"fibrous histiocytoma of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"giant cell neoplasm of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"giant cell tumor of Tenosynovium","type":"exact"},{"name":"giant cell tumor of tendon sheath","type":"exact"},{"name":"giant cell tumor of the Tenosynovium","type":"exact"},{"name":"giant cell tumour of Tenosynovium","type":"exact"},{"name":"giant cell tumour of tendon sheath","type":"exact"},{"name":"giant cell tumour of the Tenosynovium","type":"exact"},{"name":"tendon sheath giant cell neoplasm","type":"exact"},{"name":"tendon sheath giant cell tumor","type":"exact"},{"name":"tendon sheath giant cell tumour","type":"exact"},{"name":"tenosynovial giant cell neoplasm","type":"exact"},{"name":"tenosynovial giant cell tumor","type":"exact"}],"termid":"MONDO:0002522","xrefs":{"Monarch":{"xref_id":"0002522"}}}


id: PBO:0110366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR pathway substrate 8, signaling adaptor","termid":"PBO:0110366"}


id: PBO:0004920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta' subunit (predicted)","termid":"PBO:0004920"}


id: GO:0045670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoclast differentiation","termid":"GO:0045670"}


id: MONDO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 3-Methylcrotonyl-CoA carboxylase deficiency (obsolete MONDO:0000419)","termid":"MONDO:0000419","xrefs":{"Monarch":{"xref_id":"0000419"}}}


id: PBO:0003263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itty bitty phosphatase","termid":"PBO:0003263"}


id: PBO:0086718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p","termid":"PBO:0086718"}


id: MONDO:0017575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by the association of gastrointestinal dysmotility, peripheral neuropathy, chronic progressive external ophthalmoplegia and leukoencephalopathy.","definition_xrefs":["Orphanet:298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0004069","MONDO:0005244","MONDO:0005066","MONDO:0002320","MONDO:0019254"],"is_obsolete":false,"name":"mitochondrial neurogastrointestinal encephalomyopathy","secondary_identifiers":["MESH:C537477","SCTID:718214007","NCIT:C119678","NORD:1449","GARD:9920","UMLS:C0872218","MEDGEN:167876"],"synonyms":[{"name":"MNGIE","type":"exact"},{"name":"MNGIE syndrome","type":"related"},{"name":"Mitochondrial Neurogastrointestinal Encephalopathy","type":"exact"},{"name":"Mitochondrial neurogastrointestinal encephalopathy","type":"exact"},{"name":"OGIMD","type":"related"},{"name":"POLIP","type":"related"},{"name":"mitochondrial Neurogastrointestingal encephalopathy","type":"exact"},{"name":"mitochondrial neurogastrointestinal encephalopathy syndrome","type":"related"},{"name":"myoneurogastrointestinal encephalopathy syndrome","type":"related"},{"name":"oculogastrointestinal muscular dystrophy","type":"related"},{"name":"polyneuropathy, ophthalmoplegia, leukoencephalopathy, and intestinal pseudo-obstruction","type":"related"},{"name":"thymidine phosphorylase deficiency","type":"related"}],"termid":"MONDO:0017575","xrefs":{"Monarch":{"xref_id":"0017575"}}}


id: GO:0033094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: putrescine + 2-oxoglutarate = L-glutamate + 1-pyrroline + H2O. The enzymatic part of the reaction produces 4-aminobutanal that spontaneously cyclizes to form 1-pyrroline.","definition_xrefs":["GOC:mlg","RHEA:12268","EC:2.6.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"putrescine--2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:PUTTRANSAM-RXN"],"synonyms":[{"name":"PAT activity","type":"related"},{"name":"YgjG","type":"related"},{"name":"butane-1,4-diamine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine aminotransferase activity","type":"broad"},{"name":"putrescine transaminase activity","type":"broad"},{"name":"putrescine-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"putrescine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine:alpha-ketoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0033094"}


id: PBO:0012841
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perlman syndrome","termid":"PBO:0012841"}


id: MONDO:0858910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spinal disease that is characterized by severe kyphotic deformity of the cervicothoracic spine and by severe weakness of the cervical paraspinal muscles that results in the passively correctable chin-on-chest deformity. This syndrome is defined by weakness of neck extensor muscles against gravity with or without weakness of neck flexor muscles.","definition_xrefs":["DOID:0060034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dropped head syndrome","secondary_identifiers":["MEDGEN:757938","UMLS:C3266164"],"termid":"MONDO:0858910","xrefs":{"Monarch":{"xref_id":"0858910"}}}


id: PBO:0066047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 3","termid":"PBO:0066047"}


id: GO:0060753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mast cell chemotaxis","termid":"GO:0060753"}


id: GO:0071165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a GINS complex, a heterotetrameric protein complex that associates with DNA replication origins and replication forks.","definition_xrefs":["GOC:mah","PMID:16990792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication preinitiation complex assembly","termid":"GO:0071163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"GINS complex assembly","termid":"GO:0071165"}


id: GO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the cumulus oophorus to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21380641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of cumulus oophorus","synonyms":[{"name":"penetration of cumulus cells layer","type":"exact"},{"name":"penetration of cumulus mass","type":"exact"}],"termid":"GO:0061956"}


id: PBO:0002951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Hrp3","termid":"PBO:0002951"}


id: MONDO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myophosphorylase deficiency (McArdle's disease), or glycogen storage disease type 5 (GSD5), is a severe form of glycogen storage disease characterized by exercise intolerance.","definition_xrefs":["Orphanet:368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease V","secondary_identifiers":["MESH:D006012","NANDO:2200541","OMIM:232600","NANDO:1200828","GARD:6528","NCIT:C84738","SCTID:55912009","UMLS:C0017924","MedDRA:10018462","MEDGEN:5341","DOID:2746"],"synonyms":[{"name":"GSD 5","type":"related"},{"name":"GSD due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"GSD type 5","type":"exact"},{"name":"GSD type V","type":"exact"},{"name":"GSD5","type":"related"},{"name":"McArdle disease","type":"exact"},{"name":"McArdle type glycogen storage disease","type":"related"},{"name":"McArdle's disease","type":"exact"},{"name":"Mcardle disease","type":"exact"},{"name":"PYGM glycogen storage disease","type":"exact"},{"name":"Pygm deficiency","type":"related"},{"name":"glycogen storage disease 5","type":"related"},{"name":"glycogen storage disease V","type":"exact"},{"name":"glycogen storage disease caused by mutation in PYGM","type":"exact"},{"name":"glycogen storage disease due to muscle glycogen phosphorylase deficiency","type":"related"},{"name":"glycogen storage disease type 5","type":"exact"},{"name":"glycogen storage disease type V","type":"exact"},{"name":"glycogen storage disease, type V","type":"exact"},{"name":"glycogenosis due to muscle glycogen phosphorylase deficiency","type":"exact"},{"name":"glycogenosis type 5","type":"exact"},{"name":"glycogenosis type V","type":"exact"},{"name":"muscle glycogen phosphorylase deficiency","type":"related"},{"name":"myophosphorylase deficiency","type":"exact"}],"termid":"MONDO:0009293","xrefs":{"Monarch":{"xref_id":"0009293"}}}


id: GO:0097439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which tolerance to severe drying is acquired, before entering into a dry, either dormant or quiescent state.","definition_xrefs":["GOC:PO_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of desiccation tolerance","termid":"GO:0097439"}


id: PBO:0071083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 85","termid":"PBO:0071083"}


id: MONDO:0020553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary pulmonary hemosiderosis is a respiratory disease due to the deposition of hemosiderin-laden macrophages in lungs as a result of repeated alveolar hemorrhage secondary to another disease, especially dysimmunitary disorders (i.e. Heiner syndrome, autoimmune diseases), thrombotic disorders and cardiovascular disorders such as mitral stenosis. It manifests as a triad of hemoptysis, anemia and diffuse parenchymal infiltrates on chest radiography","definition_xrefs":["Orphanet:99930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary pulmonary hemosiderosis","secondary_identifiers":["UMLS:C4274326","ICD10EXP:E83.1+","GARD:19713","ICD10EXP:J99.8*","MEDGEN:909854","icd11.foundation:878618614","SCTID:716712004"],"termid":"MONDO:0020553","xrefs":{"Monarch":{"xref_id":"0020553"}}}


id: PBO:0080961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 4","termid":"PBO:0080961"}


id: GO:1904158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal central apparatus.","definition_xrefs":["GO_REF:0000079","GOC:cilia","GOC:TermGenie","PMID:9295136","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"axonemal central apparatus assembly","synonyms":[{"name":"axonemal central apparatus formation","type":"exact"}],"termid":"GO:1904158"}


id: MONDO:0004096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermoid cyst that involves the spinal cord.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"dermoid cyst","termid":"MONDO:0002378"},{"relation_name":"is_a","term_name":"central nervous system teratoma","termid":"MONDO:0002718"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord dermoid cyst","secondary_identifiers":["NCIT:C6808","MEDGEN:232125","DOID:7071","UMLS:C1333278"],"synonyms":[{"name":"dermoid cyst of spinal cord","type":"exact"},{"name":"dermoid cyst of the spinal cord","type":"exact"},{"name":"spinal cord dermoid","type":"exact"},{"name":"spinal cord dermoid cyst","type":"exact"}],"termid":"MONDO:0004096","xrefs":{"Monarch":{"xref_id":"0004096"}}}


id: MONDO:0019365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scrub typhus is a rare dust mite-borne infectious disease caused by the Orientia tsutsugamushi bacterium and characterized clinically by an eruptive fever which is potentially serious.","definition_xrefs":["Orphanet:83317"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"typhoid fever","termid":"MONDO:0005619"},{"relation_name":"is_a","term_name":"typhus","termid":"MONDO:0001246"},{"relation_name":"is_a","term_name":"bacterial hemorrhagic fever","termid":"MONDO:0600003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrub typhus","secondary_identifiers":["GARD:19035","DOID:13371","SCTID:271425001","EFO:0007480","icd11.foundation:1695340384","ICD9:081.2","MedDRA:10039766","MEDGEN:48591","MESH:D012612","UMLS:C0036472"],"synonyms":[{"name":"Japanese river fever","type":"exact"},{"name":"Kedani fever","type":"exact"},{"name":"Mite-borne rickettsiosis","type":"related"},{"name":"Mite-borne typhus","type":"related"},{"name":"chigger-borne rickettsiosis","type":"related"},{"name":"chigger-borne typhus","type":"related"},{"name":"scrub (mite-borne) typhus","type":"related"},{"name":"scrub mite-borne typhus","type":"exact"},{"name":"tropical typhus","type":"related"},{"name":"tsutsugamushi","type":"exact"},{"name":"tsutsugamushi disease","type":"exact"},{"name":"tsutsugamushi fever","type":"exact"},{"name":"typhus fever due to Rickettsia tsutsugamushi","type":"related"}],"termid":"MONDO:0019365","xrefs":{"Monarch":{"xref_id":"0019365"}}}


id: GO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the T-cell mediated immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host T-cell mediated immune response","secondary_identifiers":["GO:0052295"],"synonyms":[{"name":"modulation by organism of T-cell mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host T-cell mediated immune response","type":"exact"},{"name":"perturbation of host T-cell mediated immune response","type":"exact"},{"name":"symbiont-mediated modulation of host cell-mediated immune response","type":"exact"},{"name":"symbiont-mediated perturbation of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052156"}


id: GO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenine + H+ + H2O = hypoxanthine + NH4+.","definition_xrefs":["RHEA:23688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"adenine deaminase activity","secondary_identifiers":["EC:3.5.4.2","MetaCyc:ADENINE-DEAMINASE-RXN"],"synonyms":[{"name":"ADase activity","type":"related"},{"name":"adenase activity","type":"related"},{"name":"adenine aminase activity","type":"related"},{"name":"adenine aminohydrolase activity","type":"related"}],"termid":"GO:0000034"}


id: PBO:0067891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 193","termid":"PBO:0067891"}


id: MOD:02061
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-selenocysteine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-selenocysteine residue","termid":"MOD:02061"}


id: PR:O94709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdx1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase protein X component, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.09c","synonyms":[{"name":"Spom972h-pdx1","type":"exact"},{"name":"dihydrolipoamide dehydrogenase-binding protein of pyruvate dehydrogenase complex (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94709"}


id: PBO:0078574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51H, pseudogene","termid":"PBO:0078574"}


id: MONDO:0006760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of the fetus or newborn that occurs when fetal cells that are coated with IgG alloantibodies from the mother attack antigens inherited from the father. Severity can range from absence of symptoms to death.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcytic anemia","termid":"MONDO:0001245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"fetal erythroblastosis","secondary_identifiers":["MESH:D004899","EFO:1000937","ICD9:773.2","DOID:1098","ICD9:773","NCIT:C101304","SCTID:387705004","MEDGEN:4530","UMLS:C0014761"],"synonyms":[{"name":"EF - erythroblastosis foetalis","type":"exact"},{"name":"HDFN","type":"exact"},{"name":"erythroblastosis fetalis","type":"exact"},{"name":"haemolytic disease due to rhesus isoimmunisation","type":"exact"},{"name":"hemolytic disease of the fetus or newborn","type":"exact"},{"name":"hemolytic disease of the foetus or newborn","type":"exact"},{"name":"hemolytic disease of the newborn","type":"exact"},{"name":"isoimmune hemolytic disease of the newborn","type":"exact"},{"name":"rhesus isoimmunisation of the newborn","type":"exact"}],"termid":"MONDO:0006760","xrefs":{"Monarch":{"xref_id":"0006760"}}}


id: PBO:0048101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FTO intronic transcript 1","termid":"PBO:0048101"}


id: PBO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Dph1","termid":"PBO:0002017"}


id: FYPO:0000882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000787"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000882"}


id: GO:2000520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immunological synapse formation","synonyms":[{"name":"regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000520"}


id: PBO:0043279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member C","termid":"PBO:0043279"}


id: GO:0015191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-methionine from one side of a membrane to the other. L-methionine is 2-amino-4-(methylthio)butanoic acid.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"methionine transmembrane transporter activity","termid":"GO:0043865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-methionine transmembrane transporter activity","synonyms":[{"name":"L-methionine transporter activity","type":"broad"}],"termid":"GO:0015191"}


id: MONDO:0020077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Clonal myeloid disorders that possess both dysplastic and proliferative features but are not properly classified as either MYELODYSPLASTIC SYNDROMES or MYELOPROLIFERATIVE disorderS.","definition_xrefs":["MESH:D054437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid hemopathy","termid":"MONDO:0015756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic/myeloproliferative disease","secondary_identifiers":["GARD:9351","Orphanet:98275"],"termid":"MONDO:0020077","xrefs":{"Monarch":{"xref_id":"0020077"}}}


id: PBO:0041028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPNT2 pseudogene 1","termid":"PBO:0041028"}


id: PR:O74855
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A notchless protein homolog 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04884","PANTHER:PTHR19848:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.05c","secondary_identifiers":["UniProtKB:O74855"],"synonyms":[{"name":"Spom972h-NLE1","type":"exact"},{"name":"notchless protein homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosome biogenesis factor rsa4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74855"}


id: PBO:0012011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial type I [2Fe-2S] ferredoxin Etp1/ cytochrome oxidase cofactor Cox15, fusion protein","termid":"PBO:0012011"}


id: GO:0051977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"lysophospholipid transport","termid":"GO:0051977"}


id: PBO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK4 antisense RNA 1","termid":"PBO:0045325"}


id: PBO:0088940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase component","termid":"PBO:0088940"}


id: MONDO:0004425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overactivity of the thyroid gland resulting in overproduction of thyroid hormone and increased metabolic rate. Causes include diffuse hyperplasia of the thyroid gland (Graves' disease), single nodule in the thyroid gland, and thyroiditis. The symptoms are related to the increased metabolic rate and include weight loss, fatigue, heat intolerance, excessive sweating, diarrhea, tachycardia, insomnia, muscle weakness, and tremor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism","secondary_identifiers":["UMLS:C0020550","NANDO:2200329","MEDGEN:6972","SCTID:34486009","ICD9:242.90","MESH:D006980","DOID:7998","NANDO:2100119","NCIT:C3123","EFO:0009189"],"synonyms":[{"name":"overactive thyroid","type":"exact"}],"termid":"MONDO:0004425","xrefs":{"Monarch":{"xref_id":"0004425"}}}


id: MONDO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.","definition_xrefs":["NCIT:C3224"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"melanocytic neoplasm","termid":"MONDO:0021143"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma","secondary_identifiers":["ONCOTREE:MEL","DOID:1909","ICDO:8720/3","MESH:D008545","EFO:0000756","UMLS:C0025202","Orphanet:411533","NANDO:2200077","HP:0002861","MEDGEN:9944","SCTID:372244006"],"synonyms":[{"name":"Naevocarcinoma","type":"exact"},{"name":"malignant melanoma","type":"exact"},{"name":"melanoma","type":"exact"},{"name":"melanoma (disease)","type":"exact"},{"name":"melanoma, malignant","type":"exact"}],"termid":"MONDO:0005105","xrefs":{"Monarch":{"xref_id":"0005105"}}}


id: PBO:0090447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, implicated in DNA repair","termid":"PBO:0090447"}


id: GO:0015529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: raffinose(out) + H+(out) = raffinose(in) + H+(in).","definition_xrefs":["TC:2.A.1.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"raffinose transmembrane transporter activity","termid":"GO:0015158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"raffinose:proton symporter activity","synonyms":[{"name":"raffinose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015529"}


id: PBO:0065989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination activating 1","termid":"PBO:0065989"}


id: FYPO:0004278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased uracil DNA N-glycosylase activity","synonyms":[{"name":"reduced uracil DNA N-glycosylase activity","type":"exact"}],"termid":"FYPO:0004278"}


id: PBO:0091257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt/nickel-dependent phosphatase involved in cellular detoxification/metabolite repair Duf8901","termid":"PBO:0091257"}


id: FYPO:0003443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which medial cortical nodes move less frequently, and over shorter distances, than normal. During contractile ring assembly, medial cortical nodes normally move towards the cell center, and condense into a ring.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:24798735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"decreased medial cortical node movement during contractile ring assembly","synonyms":[{"name":"decreased medial cortical node movement during actomyosin contractile ring assembly","type":"exact"},{"name":"decreased medial cortical node movement during contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"decreased medial cortical node movement during contractile ring assembly during vegetative growth","type":"exact"},{"name":"reduced medial cortical node movement during contractile ring assembly","type":"exact"}],"termid":"FYPO:0003443"}


id: GO:0035664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like receptor where the TIRAP/MAL adaptor mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:11526399","GOC:BHF","PMID:12447442","PMID:11544529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TIRAP-dependent toll-like receptor signaling pathway","synonyms":[{"name":"MAL-dependent toll-like receptor signaling pathway","type":"exact"},{"name":"MyD88 adapter-like dependent toll-like receptor signaling pathway","type":"exact"},{"name":"TIRAP-dependent TLR signaling pathway","type":"exact"},{"name":"TIRAP-dependent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0035664"}


id: PBO:0086306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with homology to human PDCD5; PDCD5 is involved in programmed cell death; N-terminal region forms a conserved triple-helix bundle structure; overproduction suppresses lethality due to expression of the dominant PET9 allele AAC2-A128P; overexpression promotes H2O2-induced apoptosis; YMR074C is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0086306"}


id: PBO:0072622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head component 9","termid":"PBO:0072622"}


id: GO:0004873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving an asialoglycoprotein, and delivering the asialoglycoprotein into the cell via endocytosis. An asialoglycoprotein is a plasma glycoproteins from which the terminal sialic acid residue on their complex carbohydrate groups has been removed. The asialoglycoprotein receptor recognizes the terminal galactose and N-acetylgalactosamine units of the asialoglycoprotein, the receptor-ligand complex is internalized and transported to a sorting organelle where disassociation occurs before the receptor is recycled to the cell membrane.","definition_xrefs":["PMID:11278827","Wikipedia:Asialoglycoprotein","PMID:7624395","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"asialoglycoprotein receptor activity","termid":"GO:0004873"}


id: PBO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png2","termid":"PBO:0003480"}


id: PBO:0089763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, meiotic, STKc MAK-like Pit1","termid":"PBO:0089763"}


id: GO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete myosin phosphatase myosin binding (obsolete GO:0017021)","synonyms":[{"name":"myosin phosphatase myosin binding","type":"exact"}],"termid":"GO:0017021"}


id: _global:guides
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guides","termid":"_global:guides"}


id: PBO:0069794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1080, pseudogene","termid":"PBO:0069794"}


id: GO:0006890
data:
  {"annotated_genes":["SJAG_04474","SJAG_04340","SJAG_05209","SJAG_04956","SJAG_03499","SJAG_02418","SJAG_02234","SJAG_04701","SJAG_01166","SJAG_04402","SJAG_04391","SJAG_01516","SJAG_01508","SJAG_00192","SJAG_03933","SJAG_05030","SJAG_02586","SJAG_04070","SJAG_02482","SJAG_02419","SJAG_01927","SJAG_02204","SJAG_01940","SJAG_00557","SJAG_04592","SJAG_04569"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64398,65973,67275,69274,71247,71307,71625,72619,73102,73875,74244,75677,75902,76980,77968,78246,78395,90912,93239,93576,98076,98782,98873,99800,113935],"is_not":false,"summary":null,"term":"GO:0006890"},{"annotations":[113927],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.","definition_xrefs":["PMID:16510524","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00557":null,"SJAG_01166":null,"SJAG_01508":null,"SJAG_01516":null,"SJAG_01927":null,"SJAG_01940":null,"SJAG_02204":null,"SJAG_02234":null,"SJAG_02418":null,"SJAG_02419":null,"SJAG_02482":null,"SJAG_02586":null,"SJAG_03499":null,"SJAG_03933":null,"SJAG_04070":null,"SJAG_04340":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04701":null,"SJAG_04956":null,"SJAG_05030":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6811434","GO:0048220"],"synonyms":[{"name":"cis-Golgi to rough ER transport","type":"exact"},{"name":"cis-Golgi to rough ER vesicle-mediated transport","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum transport","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport","type":"exact"},{"name":"retrograde (Golgi to ER) transport","type":"exact"},{"name":"retrograde transport, Golgi to ER","type":"exact"},{"name":"retrograde transport, Golgi to endoplasmic reticulum","type":"exact"},{"name":"retrograde vesicle-mediated transport, Golgi to ER","type":"exact"}],"termid":"GO:0006890","terms_by_termid":{"GO:0006890":null,"GO:2000156":null}}


id: PBO:0077734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 2","termid":"PBO:0077734"}


id: GO:0033349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving apiose, the branched tetrose 3-C-(hydroxymethyl)-D-glycero-tetrose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrose metabolic process","termid":"GO:0033347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"apiose metabolic process","synonyms":[{"name":"apiose metabolism","type":"exact"}],"termid":"GO:0033349"}


id: FYECO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which canavanin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ canavanin","synonyms":[{"name":"canavanin added","type":"exact"}],"termid":"FYECO:0000408"}


id: PBO:0076853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 1","termid":"PBO:0076853"}


id: GO:0120241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5'-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17.","definition_xrefs":["EC:3.5.99.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"2-iminobutanoate/2-iminopropanoate deaminase","synonyms":[{"name":"2-iminobutanoate deaminase","type":"narrow"},{"name":"2-iminopropanoate deaminase","type":"narrow"},{"name":"enamine/imine deaminase","type":"broad"},{"name":"imine intermediate deaminase activity","type":"related"}],"termid":"GO:0120241"}


id: MONDO:0006920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which blood glucose levels are high, but not high enough to be classified as type 2 diabetes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"prediabetes syndrome","secondary_identifiers":["UMLS:C0362046","EFO:1001121","NCIT:C122685","DOID:11716","MedDRA:10065542","MEDGEN:83928","MESH:D011236"],"synonyms":[{"name":"borderline diabetes","type":"exact"},{"name":"prediabetes","type":"exact"},{"name":"prediabetic state","type":"exact"}],"termid":"MONDO:0006920","xrefs":{"Monarch":{"xref_id":"0006920"}}}


id: PBO:0048824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 10","termid":"PBO:0048824"}


id: GO:0052137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in host (obsolete GO:0052137)","synonyms":[{"name":"aerotaxis within host","type":"exact"}],"termid":"GO:0052137"}


id: GO:0046251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["PMID:10224006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene metabolic process","termid":"GO:0018923"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"limonene catabolic process","synonyms":[{"name":"limonene breakdown","type":"exact"},{"name":"limonene catabolism","type":"exact"},{"name":"limonene degradation","type":"exact"}],"termid":"GO:0046251"}


id: GO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase IV specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase IV activity (obsolete GO:0001057)","synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001057"}


id: PBO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"filamin C","termid":"PBO:0047680"}


id: PBO:0082371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic leucine zipper (bZIP) transcription factor","termid":"PBO:0082371"}


id: GO:0019186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group from acyl-CoA to a nitrogen atom on an acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"acyl-CoA N-acyltransferase activity","termid":"GO:0019186"}


id: PBO:0076443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 13 pseudogene 2","termid":"PBO:0076443"}


id: GO:0019051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a viral gene product activates host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host apoptotic process (obsolete GO:0019051)","synonyms":[{"name":"activation by virus of host apoptosis","type":"exact"},{"name":"activation by virus of host apoptotic programmed cell death","type":"exact"},{"name":"activation of apoptosis in host by virus","type":"exact"},{"name":"activation of host caspases by virus","type":"narrow"},{"name":"induction by virus of host apoptosis","type":"narrow"},{"name":"induction by virus of host apoptotic programmed cell death","type":"exact"},{"name":"induction by virus of host caspase activity","type":"narrow"},{"name":"induction by virus of host cysteine-type endopeptidase activity involved in apoptotic process","type":"narrow"},{"name":"induction of apoptosis in host by virus","type":"exact"},{"name":"positive regulation of apoptosis by virus","type":"narrow"},{"name":"positive regulation of apoptotic process by virus","type":"exact"}],"termid":"GO:0019051"}


id: MONDO:0019899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete distal monosomy 20q (obsolete MONDO:0019899)","secondary_identifiers":["Orphanet:96152"],"synonyms":[{"name":"distal deletion 20q","type":"exact"},{"name":"distal monosomy type 20q","type":"exact"},{"name":"monosomy 20qter","type":"exact"},{"name":"telomeric deletion 20q","type":"exact"}],"termid":"MONDO:0019899","xrefs":{"Monarch":{"xref_id":"0019899"}}}


id: MONDO:0007909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial multiple lipomatosis is a rare, benign, genetic skin disease characterized by numerous, painless, encapsulated lipomas located in the subcutaneous adipose tissue of the trunk and extremities, with relative sparing of the neck and shoulders. Association with gastroduodenal lipomatosis, brain anomalies or lipomatosis, and refractory epilepsy has been reported.","definition_xrefs":["Orphanet:199276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial multiple lipomatosis","secondary_identifiers":["ICD9:214.9","MEDGEN:698553","MESH:D000071070","SCTID:766888002","OMIM:151900","ICD9:214.8","UMLS:C1275273","GARD:12925","DOID:0070518"],"synonyms":[{"name":"lipoma","type":"related"},{"name":"lipomatosis, familial multiple","type":"related"},{"name":"lipomatosis, multiple","type":"related"}],"termid":"MONDO:0007909","xrefs":{"Monarch":{"xref_id":"0007909"}}}


id: PBO:0064941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAC2 small nuclear protein","termid":"PBO:0064941"}


id: GO:0044322
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67104],"is_not":false,"summary":null,"term":"GO:0044322"}]},"cv_name":"cellular_component","definition":"A subcompartment of the endoplasmic reticulum in which proteins with improper or incorrect folding accumulate. Enzymes in this compartment direct proteins with major folding problems to translocation to the cytosol and degradation, and proteins with minor folding problems to the ER, to interact with chaperon proteins.","definition_xrefs":["PMID:11408579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum quality control compartment","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"ER quality control compartment","type":"exact"},{"name":"ER-derived quality control compartment","type":"related"},{"name":"ERQC","type":"exact"}],"termid":"GO:0044322","terms_by_termid":{"GO:0044322":null}}


id: GO:0016805
data:
  {"annotated_genes":["SJAG_04858","SJAG_01542"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60392,61553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a dipeptide.","definition_xrefs":["PMID:19879002","EC:3.4.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01542":null,"SJAG_04858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"dipeptidase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-266012","Reactome:R-HSA-5433067","Reactome:R-HSA-9026771","GO:0102008","MetaCyc:3.4.13.18-RXN","Reactome:R-HSA-5693783"],"synonyms":[{"name":"cytosolic dipeptidase activity","type":"narrow"}],"termid":"GO:0016805","terms_by_termid":{"GO:0070573":null}}


id: FYPO:0005277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has two or more nuclei and more than one septum per cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate","termid":"FYPO:0003341"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"multinucleate multiseptate cell","termid":"FYPO:0005277"}


id: GO:0047803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + sulfite = L-cysteate + sulfide.","definition_xrefs":["EC:4.4.1.10","MetaCyc:CYSTEINE-LYASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"cysteine lyase activity","secondary_identifiers":["RHEA:20916"],"synonyms":[{"name":"L-cysteine hydrogen-sulfide-lyase (adding sulfite)","type":"related"},{"name":"L-cysteine hydrogen-sulfide-lyase (adding sulfite; L-cysteate-forming)","type":"related"},{"name":"cysteine (sulfite) lyase activity","type":"related"}],"termid":"GO:0047803"}


id: PBO:0043222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 1","termid":"PBO:0043222"}


id: PBO:0073348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 9","termid":"PBO:0073348"}


id: FYPO:0007883
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cleavage-dependent termination of transcription by RNA polymerase II is abnormal. In cleavage-dependent termination, co-transcriptional secondary structure-dependent endonucleolytic cleavage triggers RNA polymerase II transcription termination; transcripts are not polyadenylated, and are subsequently rapidly degraded in the nucleus. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["PMID:34352089","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased termination of RNA polymerase II transcription","termid":"FYPO:0006613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased cleavage-dependent termination of RNA polymerase II transcription","synonyms":[{"name":"decreased Pac1-dependent termination of RNA polymerase II transcription","type":"related"},{"name":"decreased cleavage-dependent RNA polymerase II transcription termination","type":"exact"},{"name":"decreased cleavage-dependent premature transcription termination","type":"narrow"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"decreased cleavage-dependent termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0007883"}


id: PBO:0078644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 1-2","termid":"PBO:0078644"}


id: PBO:0079346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 30, pseudogene","termid":"PBO:0079346"}


id: PBO:0003507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1769 family protein","termid":"PBO:0003507"}


id: GO:0006372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete lariat formation, 5'-splice site cleavage (obsolete GO:0006372)","synonyms":[{"name":"lariat formation, 5'-splice site cleavage","type":"exact"}],"termid":"GO:0006372"}


id: GO:1901127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of candicidin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00101","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"candicidin metabolic process","termid":"GO:1901125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin biosynthetic process","synonyms":[{"name":"candicidin anabolism","type":"exact"},{"name":"candicidin biosynthesis","type":"exact"},{"name":"candicidin formation","type":"exact"},{"name":"candicidin synthesis","type":"exact"}],"termid":"GO:1901127"}


id: PBO:0088716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase","termid":"PBO:0088716"}


id: PR:O13787
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec62 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec62 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.09","synonyms":[{"name":"Spom972h-sec62","type":"exact"}],"termid":"PR:O13787"}


id: GO:0015012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of heparan sulfate proteoglycans, which consist of a core protein linked to a heparan sulfate glycosaminoglycan. The heparan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-N-acetyl-D-glucosamine-alpha-(1,4)-hexuronic acid, the former being either sulfated or deacetylated on its amino group as well as sulfated on one of its hydroxyl groups, and the latter being e a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids. Heparan sulfate chains are covalently linked to serine/threonine residues (O-linked) of the core protein via a tetrasaccharide linker sequence (xylose-galactose-galactose-glucuronate).","definition_xrefs":["PMID:27241222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"heparan sulfate proteoglycan metabolic process","termid":"GO:0030201"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"heparan sulfate proteoglycan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-6558","Reactome:R-HSA-2022928"],"synonyms":[{"name":"heparan sulfate proteoglycan anabolism","type":"exact"},{"name":"heparan sulfate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulfate proteoglycan formation","type":"exact"},{"name":"heparan sulfate proteoglycan synthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthesis","type":"exact"},{"name":"heparan sulphate proteoglycan biosynthetic process","type":"exact"},{"name":"heparin proteoglycan biosynthetic process","type":"related"}],"termid":"GO:0015012"}


id: PBO:0063251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha subfamily C, 2","termid":"PBO:0063251"}


id: MONDO:0021446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the epiglottis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"},{"relation_name":"is_a","term_name":"epiglottis neoplasm","termid":"MONDO:0004109"},{"relation_name":"is_a","term_name":"benign neoplasm of hypopharynx","termid":"MONDO:0021461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of epiglottis","secondary_identifiers":["icd11.foundation:1549564600","NCIT:C4606","SCTID:92089006","MEDGEN:83861","UMLS:C0347236"],"synonyms":[{"name":"benign Epiglottis neoplasm","type":"exact"},{"name":"benign Epiglottis tumor","type":"exact"},{"name":"benign Epiglottis tumour","type":"exact"},{"name":"benign epiglottic neoplasm","type":"exact"},{"name":"benign epiglottic tumor","type":"exact"},{"name":"benign epiglottic tumour","type":"exact"},{"name":"benign neoplasm of the Epiglottis","type":"exact"},{"name":"benign tumor of Epiglottis","type":"exact"},{"name":"benign tumor of the Epiglottis","type":"exact"},{"name":"benign tumour of Epiglottis","type":"exact"},{"name":"benign tumour of the Epiglottis","type":"exact"},{"name":"epiglottis benign neoplasm","type":"exact"}],"termid":"MONDO:0021446","xrefs":{"Monarch":{"xref_id":"0021446"}}}


id: GO:0045164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Secretin is a hormone that takes part in the digestion process. It also has effects on organs other than gastrointestinal tract.","definition_xrefs":["PMID:11320551"],"gene_count":0,"genotype_count":0,"name":"obsolete secretin (sensu Mammalia) (obsolete GO:0045164)","synonyms":[{"name":"secretin (sensu Mammalia)","type":"exact"}],"termid":"GO:0045164"}


id: PBO:0077222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane BAX inhibitor motif containing 6","termid":"PBO:0077222"}


id: PR:Q9USG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug190 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 190 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.06","synonyms":[{"name":"Spom972h-mug190","type":"exact"}],"termid":"PR:Q9USG8"}


id: PBO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insulinase Related Protease","termid":"PBO:0016937"}


id: MONDO:0015638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign partial epilepsy of infancy with complex partial seizures is a rare infantile epilepsy syndrome characterized by complex partial seizures presenting with motion arrest, decreased responsiveness, staring, automatisms and mild clonic movements, with or without apneas, normal interictal EEG and focal, mostly temporal discharges in ictal EEG. Most often, seizures occur in clusters and have a good response to treatment. Psychomotor development is normal.","definition_xrefs":["Orphanet:166299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign non-familial infantile seizures","termid":"MONDO:0015637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign partial epilepsy of infancy with complex partial seizures","secondary_identifiers":["MEDGEN:1654146","UMLS:C4749347","icd11.foundation:147618459","GARD:20072"],"termid":"MONDO:0015638","xrefs":{"Monarch":{"xref_id":"0015638"}}}


id: PBO:0003683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan Meu25","termid":"PBO:0003683"}


id: GO:0038055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a member of the BMP family of proteins from a cell.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"BMP secretion","synonyms":[{"name":"BMP protein secretion","type":"exact"},{"name":"bone morphogenetic protein secretion","type":"exact"}],"termid":"GO:0038055"}


id: RO:0002451
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a disease and organism","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmitted_by","termid":"RO:0002451"}


id: PR:O74801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein yml6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.08c","synonyms":[{"name":"Spom972h-SPBC2D10.08c","type":"exact"}],"termid":"PR:O74801"}


id: GO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contractile ring, i.e. a cytoskeletal structure composed of actin filaments and myosin, that forms beneath the plasma membrane at the mother-bud neck in mitotic cells that divide by budding in preparation for completing cytokinesis. An example of this structure is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0015629","GO:0005938","GO:0005575","GO:0005737","GO:0070938"],"is_obsolete":false,"name":"cellular bud neck contractile ring","synonyms":[{"name":"neck ring","type":"exact"}],"termid":"GO:0000142"}


id: PBO:0048076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 27","termid":"PBO:0048076"}


id: GO:0009092
data:
  {"annotated_genes":["SJAG_00234","SJAG_02290","SJAG_00881","SJAG_03152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116083,71475,74000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[100992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving homoserine, alpha-amino-gamma-hydroxybutyric acid, an intermediate in the biosynthesis of cystathionine, threonine and methionine.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00881":null,"SJAG_02290":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"homoserine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"homoserine metabolism","type":"exact"}],"termid":"GO:0009092","terms_by_termid":{"GO:0009090":null,"GO:0019280":null}}


id: GO:0070196
data:
  {"annotated_genes":["SJAG_02376"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111648],"is_not":false,"summary":null,"term":"GO:0070196"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 3 complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02376":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-3 assembly","type":"exact"},{"name":"eIF3 assembly","type":"exact"}],"termid":"GO:0070196","terms_by_termid":{"GO:0070196":null}}


id: PBO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22 (predicted)","termid":"PBO:0017038"}


id: PBO:0052257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation factor 1","termid":"PBO:0052257"}


id: GO:1904116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vasopressin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22811487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vasopressin","termid":"GO:1904116"}


id: GO:0019939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-palmitoleyl-L-cysteine specifically.","definition_xrefs":["RESID:AA0308"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-palmitoleyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0019939)","synonyms":[{"name":"peptidyl-S-palmitoleyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-palmitoleyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-palmitoleyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0019939"}


id: PBO:0071310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 33","termid":"PBO:0071310"}


id: PBO:0040461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A3 divergent transcript","termid":"PBO:0040461"}


id: MONDO:0022872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis X-linked recessive","termid":"MONDO:0022872","xrefs":{"Monarch":{"xref_id":"0022872"}}}


id: PBO:0052719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 11","termid":"PBO:0052719"}


id: PBO:0039396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 1","termid":"PBO:0039396"}


id: GO:0009228
data:
  {"annotated_genes":["SJAG_04067","SJAG_02420","SJAG_02421","SJAG_00381","SJAG_02406","SJAG_00827","SJAG_03538","SJAG_03362","SJAG_01970","SJAG_04282","SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61722,70516,74292,74371,77505,78775],"is_not":false,"summary":null,"term":"GO:0009228"},{"annotations":[113988,89378],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[99852,110758,110759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THISYN-PWY"],"synonyms":[{"name":"thiamin anabolism","type":"exact"},{"name":"thiamin biosynthetic process","type":"exact"},{"name":"thiamine biosynthesis","type":"exact"},{"name":"thiamine formation","type":"exact"},{"name":"thiamine synthesis","type":"exact"},{"name":"vitamin B1 biosynthesis","type":"exact"},{"name":"vitamin B1 biosynthetic process","type":"exact"}],"termid":"GO:0009228","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: GO:0005765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lytic vacuole membrane","termid":"GO:0098852"},{"relation_name":"part_of","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"lysosomal membrane","synonyms":[{"name":"lysosome membrane","type":"exact"}],"termid":"GO:0005765"}


id: FYPO:0005537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomerase holoenzyme complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal telomerase holoenzyme complex assembly","synonyms":[{"name":"normal telomerase holoenzyme complex assembly during mitotic cell cycle","type":"related"},{"name":"normal telomerase holoenzyme complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005537"}


id: FYPO:0005751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Zeocin (phleomycin D1).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on Zeocin","synonyms":[{"name":"normal cell population growth in presence of Zeocin","type":"exact"},{"name":"normal cell population growth on Zeocin","type":"exact"},{"name":"normal cell population growth on phleomycin D1","type":"exact"},{"name":"normal vegetative cell population growth on Zeocin","type":"exact"}],"termid":"FYPO:0005751"}


id: PBO:0088584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 2","termid":"PBO:0088584"}


id: PBO:0077787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase III alpha","termid":"PBO:0077787"}


id: PBO:0028842
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-heterochromatin_assembly_beyond_boundary_element_IRC1R","termid":"PBO:0028842"}


id: PBO:0004328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-M (predicted)","termid":"PBO:0004328"}


id: FYPO:0006506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during G1 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal RNA level during mitotic G1 phase","synonyms":[{"name":"normal RNA accumulation during mitotic G1 phase","type":"related"},{"name":"normal RNA level during G1 phase during vegetative growth","type":"exact"},{"name":"normal RNA level during G1 phase of mitotic cell cycle","type":"exact"},{"name":"normal mRNA level during mitotic G1 phase","type":"narrow"},{"name":"normal transcript level during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006506"}


id: MONDO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short bowel syndrome (obsolete MONDO:0001077)","termid":"MONDO:0001077","xrefs":{"Monarch":{"xref_id":"0001077"}}}


id: MONDO:0015607
data:
  {"annotated_genes":["SJAG_00786","SJAG_02035","SJAG_01465","SJAG_04324","SJAG_04663","SJAG_03635","SJAG_03286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86337,86335,86336,86338,86339,86340,86341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"Male sterility due to chromosome Y deletion is characterized by a severe deficiency of spermatogenesis. Chromosome Y deletions are a frequent genetic cause of male infertility.","definition_xrefs":["Orphanet:1646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_01465":null,"SJAG_02035":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_04324":null,"SJAG_04663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"partial chromosome Y deletion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HGNC:11311","MESH:C536297","MEDGEN:267211","GARD:16574","SCTID:717158001","UMLS:C1507149"],"synonyms":[{"name":"Male sterility due to chromosome Y deletion","type":"exact"},{"name":"Y-chromosome microdeletions","type":"related"},{"name":"partial deletion of Y","type":"related"},{"name":"partial deletion of Y chromosome short arm","type":"related"},{"name":"partial deletion of chromosome Y","type":"related"},{"name":"partial deletion of the long arm of the Y chromosome","type":"related"}],"termid":"MONDO:0015607","terms_by_termid":{"MONDO:0010767":null},"xrefs":{"Monarch":{"xref_id":"0015607"}}}


id: PBO:0113473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; PM retention is dependent on Avo3p","termid":"PBO:0113473"}


id: GO:0035081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by hormones that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death","termid":"GO:0012502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by hormones","termid":"GO:0035081"}


id: MONDO:0020064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary valve agenesis is a rare congenital heart malformation characterized by a total or partial absence of the pulmonary valve leaflets associated with stenosis of the pulmonary artery orifice and aneurysmal dilatation of the pulmonary arteries. It usually occurs in association with additional cardiovascular malformations such as teralogy of fallot or ventricular septal defect, or can occur as part of a syndrome (e.g. 22q11.2 deletion syndrome). Clinical features depend on the presence of associated cardiac malformations and include pulmonary insufficiency, bronchial obstruction (secondary to compression by aneurysmally dilated pulmonary arteries), pulmonary stenosis, cyanosis, and cardiac failure.3424","definition_xrefs":["Orphanet:982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary valve agenesis","secondary_identifiers":["NANDO:2200280","SCTID:6996004","UMLS:C0344983","GARD:4597","NANDO:2100095","MEDGEN:576671"],"synonyms":[{"name":"PVA","type":"exact"},{"name":"absent pulmonary valve syndrome","type":"exact"},{"name":"congenital absence of the pulmonary valve","type":"exact"},{"name":"pulmonary valves agenesis","type":"related"}],"termid":"MONDO:0020064","xrefs":{"Monarch":{"xref_id":"0020064"}}}


id: MONDO:0003050
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A poorly differentiated non-small cell lung carcinoma composed of large polygonal cells without evidence of glandular or squamous differentiation. There is a male predilection.","definition_xrefs":["NCIT:C4450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell carcinoma","termid":"MONDO:0005232"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung large cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:91060","SCTID:254629004","DOID:4556","ICD9:162.9","UMLS:C0345958","EFO:0003050","MONDO:0006024","ONCOTREE:LCLC"],"synonyms":[{"name":"LCLC","type":"related"},{"name":"anaplastic lung carcinoma","type":"exact"},{"name":"large cell carcinoma of lung","type":"exact"},{"name":"large cell carcinoma of the lung","type":"exact"},{"name":"large cell lung cancer","type":"exact"},{"name":"large cell lung carcinoma","type":"exact"},{"name":"large cell undifferentiated lung carcinoma","type":"exact"},{"name":"lung large cell carcinoma","type":"exact"}],"termid":"MONDO:0003050","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0003050"}}}


id: PBO:0002981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein Klf1","termid":"PBO:0002981"}


id: PBO:0059566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1I, pseudogene","termid":"PBO:0059566"}


id: GO:0048631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["PMID:15907921","GOC:lm","PMID:15726494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"}


id: PBO:0028116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tributyltin","termid":"PBO:0028116"}


id: PBO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kringle containing transmembrane protein 1","termid":"PBO:0052616"}


id: MONDO:0018959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Potassium-aggravated myotonia (PAM) is a muscular channelopathy presenting with a pure myotonia dramatically aggravated by potassium ingestion, with variable cold sensitivity and no episodic weakness. This group includes three forms: myotonia fluctuans, myotonia permanens, and acetazolamide-responsive myotonia.","definition_xrefs":["Orphanet:612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"},{"relation_name":"is_a","term_name":"SCN4A-related channelopathy","termid":"MONDO:0800468"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium-aggravated myotonia","secondary_identifiers":["SCTID:702355008","GARD:4459","MESH:C538353","UMLS:C2931826","MEDGEN:444151","icd11.foundation:1707250468","NCIT:C122788","NANDO:1200500","OMIM:608390"],"synonyms":[{"name":"K+-aggravated myotonia","type":"exact"},{"name":"K-aggravated myotonia","type":"exact"},{"name":"Laryngospasm, Severe Neonatal Episodic","type":"related"},{"name":"MYOTONIA, POTASSIUM-AGGRAVATED","type":"related"},{"name":"Myotonia Congenita, Acetazolamide-Responsive","type":"related"},{"name":"Myotonia Congenita, Atypical","type":"related"},{"name":"Myotonia Fluctuans","type":"related"},{"name":"Myotonia Permanens","type":"related"},{"name":"PAM","type":"exact"},{"name":"Potassium aggravated myotonia","type":"exact"},{"name":"Sodium Channel Muscle Disease","type":"related"},{"name":"myotonia congenita, atypical, acetazolamide-responsive","type":"exact"}],"termid":"MONDO:0018959","xrefs":{"Monarch":{"xref_id":"0018959"}}}


id: PBO:0088271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl5","termid":"PBO:0088271"}


id: GO:0099587
data:
  {"annotated_genes":["SJAG_02968","SJAG_02463","SJAG_04551","SJAG_04185","SJAG_03631","SJAG_02877","SJAG_05229","SJAG_04668","SJAG_01493","SJAG_00296","SJAG_01090","SJAG_04830","SJAG_04246","SJAG_01353","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114739,67331,92740,74816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[114892,88281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[113518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[113668,91557],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[80298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[102463],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[70932,72638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[110430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[104492,113519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"}]},"cv_name":"biological_process","definition":"The directed movement of inorganic ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion transmembrane transport","termid":"GO:0098660"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_01353":null,"SJAG_01493":null,"SJAG_02463":null,"SJAG_02877":null,"SJAG_02883":null,"SJAG_02968":null,"SJAG_03631":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04830":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inorganic ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"inorganic ion import into cell","type":"exact"}],"termid":"GO:0099587","terms_by_termid":{"GO:0071578":null,"GO:0098703":null,"GO:0098705":null,"GO:0098711":null,"GO:0098716":null,"GO:1902434":null,"GO:1905665":null,"GO:1905949":null,"GO:1990573":null}}


id: PBO:0076037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33 pseudogene 1","termid":"PBO:0076037"}


id: PBO:0090641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain","termid":"PBO:0090641"}


id: PBO:0084500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for meiotic recombination; makes DNA double-strand breaks (DSB) during meiotic recombination, homolog pairing, and synaptonemal complex formation; role in meiotic DSB formation involves a topo-II-like transesterase mechanism; forms monotetrameric complex; covalently linked to DSBs through a 5'-phosphodiester bond between a catalytic tyrosine (Y135) and the DSB 5'- end; sequence similarity to a topo VI subunit from archaea, fission yeast rec12 and human SPO11","termid":"PBO:0084500"}


id: PBO:0004277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase(predicted)","termid":"PBO:0004277"}


id: GO:0019244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"lactate biosynthetic process","termid":"GO:0019249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactate biosynthetic process from pyruvate","synonyms":[{"name":"lactate anabolism from pyruvate","type":"exact"},{"name":"lactate formation from pyruvate","type":"exact"},{"name":"lactate synthesis from pyruvate","type":"exact"},{"name":"pyruvate fermentation to lactate","type":"exact"}],"termid":"GO:0019244"}


id: GO:0070367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"negatively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte differentiation","synonyms":[{"name":"down regulation of hepatocyte differentiation","type":"exact"},{"name":"down-regulation of hepatocyte differentiation","type":"exact"},{"name":"downregulation of hepatocyte differentiation","type":"exact"},{"name":"inhibition of hepatocyte differentiation","type":"narrow"},{"name":"negative regulation of liver cell differentiation","type":"exact"}],"termid":"GO:0070367"}


id: MONDO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nodular enlargement of the thyroid gland associated with hyperthyroidism.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism","termid":"MONDO:0004425"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plummer disease","secondary_identifiers":["SCTID:57777000","EFO:0009191","ICD9:242.3","DOID:11277","ICD9:242.30","NCIT:C35171","UMLS:C0342127","MEDGEN:137963"],"synonyms":[{"name":"Plummer disease","type":"exact"},{"name":"Plummer's disease","type":"exact"},{"name":"Toxic goiter","type":"exact"},{"name":"Toxic goitre","type":"exact"},{"name":"toxic nodular goiter","type":"exact"},{"name":"toxic nodular goitre","type":"exact"}],"termid":"MONDO:0001252","xrefs":{"Monarch":{"xref_id":"0001252"}}}


id: PBO:0053920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1217","termid":"PBO:0053920"}


id: PBO:0058035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4256","termid":"PBO:0058035"}


id: PBO:0000228
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"domain combination not observed in other organisms","termid":"PBO:0000228"}


id: PBO:0042136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholecystokinin B receptor","termid":"PBO:0042136"}


id: PBO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_high_osmolarity","termid":"PBO:0031349"}


id: FYPO:0006868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"decreased protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase of meiosis I","type":"exact"},{"name":"decreased protein localization to cell cortex in zygote","type":"related"},{"name":"reduced protein localization to cell cortex during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006868"}


id: PBO:0034141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_overlaps","termid":"PBO:0034141"}


id: PBO:0062965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 8","termid":"PBO:0062965"}


id: GO:0051523
data:
  {"annotated_genes":["SJAG_00216","SJAG_04322","SJAG_01456","SJAG_02838","SJAG_04724","SJAG_03486","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88396,100065,103805,107171,111071,116778,118202],"is_not":false,"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"The process in which a cell switches from monopolar cell growth to bipolar cell growth.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"},{"relation_name":"is_a","term_name":"regulation of direction of cell growth","termid":"GO:0061389"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"cell growth mode switching, monopolar to bipolar","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NETO","type":"narrow"},{"name":"new end take off","type":"narrow"}],"termid":"GO:0051523","terms_by_termid":{"GO:0051523":null}}


id: PBO:0036148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036148"}


id: MONDO:0001245
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Anemia in which the red blood cell volume is decreased.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"microcytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C35141","HP:0001935","UMLS:C5194182","SCTID:234349007","DOID:11252","icd11.foundation:1380406043","MEDGEN:1673948"],"termid":"MONDO:0001245","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0001245"}}}


id: PBO:0031005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level","termid":"PBO:0031005"}


id: GO:1990966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of generating ATP in the nucleus from poly-ADP-D-ribose. Nuclear ATP generation is required for extensive chromatin remodeling events that are energy-consuming.","definition_xrefs":["PMID:27257257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ATP generation from poly-ADP-D-ribose","termid":"GO:1990966"}


id: PBO:0056068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member D","termid":"PBO:0056068"}


id: PBO:0004296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl-tRNA hydrolase Pth1 (predicted)","termid":"PBO:0004296"}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: PBO:0068138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 445","termid":"PBO:0068138"}


id: MONDO:0014285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia type 1","termid":"MONDO:0020337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"congenital dyserythropoietic anemia type type 1B","secondary_identifiers":["GARD:15994","DOID:0111397","MEDGEN:816515","OMIM:615631","UMLS:C3810185"],"synonyms":[{"name":"CDA, type IB","type":"related"},{"name":"CDAN1B","type":"related"},{"name":"anemia, congenital dyserythropoietic, type IB","type":"exact"},{"name":"congenital dyserythropoietic anemia type type 1B","type":"exact"},{"name":"dyserythropoietic anemia, congenital, type IB","type":"exact"}],"termid":"MONDO:0014285","xrefs":{"Monarch":{"xref_id":"0014285"}}}


