# terms

id: MONDO:0016085
data:
  {"annotated_genes":["SJAG_02349","SJAG_00288"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007204"},{"annotations":[85796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014573"}]},"cv_name":"mondo","definition":"An extremely rare form of bone dysplasia characterized by the features of osteogenesis imperfecta such as bone fragility associated with multiple fractures, bone deformities (metaphyseal irregularities and bowing of the long bones) and blue sclera, in association with growth failure, craniosynostosis, hydrocephalus, ocular proptosis, and distinctive facial features (e.g. frontal bossing, midface hypoplasia, and micrognathia).","definition_xrefs":["Orphanet:2050"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00288":null,"SJAG_02349":null},"genotype_count":0,"is_obsolete":false,"name":"Cole-Carpenter syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1425","UMLS:C1862178","DOID:0060438","icd11.foundation:1458793358","MEDGEN:350614","MESH:C535963","OMIMPS:112240","NCIT:C130985"],"synonyms":[{"name":"Cole Carpenter syndrome","type":"related"},{"name":"bone fragility-craniosynostosis-proptosis-hydrocephalus syndrome","type":"exact"}],"termid":"MONDO:0016085","terms_by_termid":{"MONDO:0007204":null,"MONDO:0014573":null},"xrefs":{"Monarch":{"xref_id":"0016085"}}}


id: MONDO:0017404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal Xq28 microduplication syndrome is a rare, hereditary, syndromic intellectual disability characterized by cognitive impairment, behavioral and psychiatric problems, recurrent infections, atopic diseases, and distinctive facial features in males. Females are clinically asymptomatic or mildly affected, presenting mild learning difficulties and facial dysmorphism.","definition_xrefs":["Orphanet:293939"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"chromosome Xq28 duplication syndrome","termid":"MONDO:0010436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"distal Xq28 microduplication syndrome","secondary_identifiers":["DECIPHER:88","MEDGEN:1655645","UMLS:C4751127","GARD:17350"],"synonyms":[{"name":"Xq28 Microduplication","type":"exact"},{"name":"distal dup(X)q(28)","type":"exact"},{"name":"distal trisomy Xq28","type":"exact"}],"termid":"MONDO:0017404","xrefs":{"Monarch":{"xref_id":"0017404"}}}


id: PBO:0053611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 645","termid":"PBO:0053611"}


id: MONDO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete horns in sheep (obsolete MONDO:0011111)","secondary_identifiers":["OMIM:601563"],"synonyms":[{"name":"Ho","type":"related"},{"name":"horns in sheep","type":"exact"}],"termid":"MONDO:0011111","xrefs":{"Monarch":{"xref_id":"0011111"}}}


id: MONDO:0001297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute compression of the heart caused by increased intrapericardial pressure due to the collection of blood or fluid in the pericardium from rupture of the heart, penetrating trauma, or progressive effusion.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardial effusion","termid":"MONDO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac tamponade","secondary_identifiers":["icd11.foundation:216782575","ICD10CM:I31.4","ICD9:423.3","EFO:1001285","MEDGEN:40108","UMLS:C0007177","NCIT:C50481","MESH:D002305","SCTID:35304003","DOID:115"],"synonyms":[{"name":"pericardial tamponade","type":"exact"},{"name":"rose's tamponade","type":"exact"}],"termid":"MONDO:0001297","xrefs":{"Monarch":{"xref_id":"0001297"}}}


id: PBO:0088657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S rRNA endonuclease Utp24","termid":"PBO:0088657"}


id: GO:0016360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a sensory organ precursor cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination involved in pattern specification","termid":"GO:0060582"},{"relation_name":"part_of","term_name":"sensory organ boundary specification","termid":"GO:0008052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory organ precursor cell fate determination","synonyms":[{"name":"sense organ precursor cell fate determination","type":"exact"}],"termid":"GO:0016360"}


id: GO:0102900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dehydroabietadienal + NADPH + O2 = dehydroabietic acid + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dehydroabietadienal hydroxylase activity (obsolete GO:0102900)","termid":"GO:0102900"}


id: MONDO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic meningitis","secondary_identifiers":["UMLS:C0854214","ICD9:320.81","MEDGEN:678523","DOID:14559","SCTID:445059005"],"synonyms":[{"name":"meningitis caused by anaerobic bacteria","type":"exact"},{"name":"meningitis due to anaerobic bacteria","type":"exact"}],"termid":"MONDO:0002000","xrefs":{"Monarch":{"xref_id":"0002000"}}}


id: MONDO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric cancer (obsolete MONDO:0000126)","termid":"MONDO:0000126","xrefs":{"Monarch":{"xref_id":"0000126"}}}


id: SO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA segment that ranges from about -250 to -40 relative to +1 of RNA transcription start site, where sequence specific DNA-binding transcription factors binds, such as Sp1, CTF (CCAAT-binding transcription factor), and CBF (CCAAT-box binding factor).","definition_xrefs":["SO:ml","PMID:9679020","PMID:12515390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal_promoter_element","synonyms":[{"name":"proximal promoter element","type":"related"},{"name":"specific transcription factor binding site","type":"related"}],"termid":"SO:0001668"}


id: PBO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 divergent transcript","termid":"PBO:0080005"}


id: GO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + O2 = acetaldehyde + nitrite.","definition_xrefs":["EC:1.13.12.16","RHEA:28767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nitronate monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPROPANE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-nitropropane dioxygenase activity","type":"related"},{"name":"nitronate:oxygen 2-oxidoreductase (nitrite-forming) activity","type":"exact"}],"termid":"GO:0018580"}


id: FYPO:0005266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium dodecyl sulfate (SDS) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium dodecyl sulphate","type":"exact"},{"name":"resistant to SDS","type":"exact"},{"name":"resistant to sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0005266"}


id: PBO:0056240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGOH divergent transcript","termid":"PBO:0056240"}


id: GO:0019208
data:
  {"annotated_genes":["SJAG_03793","SJAG_04871","SJAG_03940","SJAG_01142","SJAG_04968","SJAG_00078","SJAG_00229","SJAG_00095","SJAG_04638","SJAG_03272","SJAG_04999","SJAG_03309","SJAG_00369","SJAG_01901","SJAG_02380","SJAG_00526","SJAG_01270","SJAG_03353","SJAG_03681","SJAG_04627","SJAG_00534"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89069,73302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008597"},{"annotations":[118874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019211"},{"annotations":[73022,76793,74966,93270,115283,79269,98028,118250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[70568,89721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[96662,93324,78632,68854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019888"},{"annotations":[74987,76342,88194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[76119,72056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"regulates","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_01901":null,"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04627":null,"SJAG_04638":null,"SJAG_04871":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"regulates","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019208","terms_by_termid":{"GO:0004864":null,"GO:0004865":null,"GO:0008160":null,"GO:0008597":null,"GO:0019211":null,"GO:0019888":null,"GO:0072542":null}}


id: MONDO:0002280
data:
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reduction in the number of red blood cells, the amount of hemoglobin, and/or the volume of packed red blood cells. Clinically, anemia represents a reduction in the oxygen-transporting capacity of a designated volume of blood, resulting from an imbalance between blood loss (through hemorrhage or hemolysis) and blood production. Signs and symptoms of anemia may include pallor of the skin and mucous membranes, shortness of breath, palpitations of the heart, soft systolic murmurs, lethargy, and fatigability.","definition_xrefs":["NCIT:C2869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":85,"genes_by_uniquename":{"SJAG_00066":null,"SJAG_00088":null,"SJAG_00166":null,"SJAG_00235":null,"SJAG_00319":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00487":null,"SJAG_00605":null,"SJAG_00611":null,"SJAG_00640":null,"SJAG_00749":null,"SJAG_00839":null,"SJAG_00846":null,"SJAG_00921":null,"SJAG_00930":null,"SJAG_01007":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_01199":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01410":null,"SJAG_01417":null,"SJAG_01512":null,"SJAG_01548":null,"SJAG_01568":null,"SJAG_01588":null,"SJAG_01615":null,"SJAG_01621":null,"SJAG_01704":null,"SJAG_01840":null,"SJAG_02009":null,"SJAG_02046":null,"SJAG_02280":null,"SJAG_02288":null,"SJAG_02297":null,"SJAG_02335":null,"SJAG_02339":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02457":null,"SJAG_02539":null,"SJAG_02556":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02708":null,"SJAG_02749":null,"SJAG_02796":null,"SJAG_02802":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03153":null,"SJAG_03254":null,"SJAG_03335":null,"SJAG_03424":null,"SJAG_03447":null,"SJAG_03497":null,"SJAG_03762":null,"SJAG_03919":null,"SJAG_03929":null,"SJAG_03961":null,"SJAG_04042":null,"SJAG_04066":null,"SJAG_04168":null,"SJAG_04192":null,"SJAG_04204":null,"SJAG_04217":null,"SJAG_04334":null,"SJAG_04414":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04473":null,"SJAG_04478":null,"SJAG_04491":null,"SJAG_04495":null,"SJAG_04695":null,"SJAG_04731":null,"SJAG_04746":null,"SJAG_04881":null,"SJAG_04984":null,"SJAG_05180":null,"SJAG_05283":null,"SJAG_05979":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:271737000","HP:0001903","ICD9:285.8","ICD9:285.9","DOID:2355","MEDGEN:1526","MESH:D000740","UMLS:C0002871"],"synonyms":[{"name":"anaemia (disease)","type":"exact"},{"name":"anemia","type":"exact"},{"name":"anemia (disease)","type":"exact"}],"termid":"MONDO:0002280","terms_by_termid":{"MONDO:0007109":null,"MONDO:0007110":null,"MONDO:0007925":null,"MONDO:0008165":null,"MONDO:0008422":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0008785":null,"MONDO:0008787":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009238":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009354":null,"MONDO:0009605":null,"MONDO:0009606":null,"MONDO:0009609":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010184":null,"MONDO:0010438":null,"MONDO:0010480":null,"MONDO:0010493":null,"MONDO:0010524":null,"MONDO:0011639":null,"MONDO:0012197":null,"MONDO:0012204":null,"MONDO:0012529":null,"MONDO:0012700":null,"MONDO:0012924":null,"MONDO:0012925":null,"MONDO:0012937":null,"MONDO:0012938":null,"MONDO:0012939":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013216":null,"MONDO:0013217":null,"MONDO:0013248":null,"MONDO:0013275":null,"MONDO:0013307":null,"MONDO:0013499":null,"MONDO:0013851":null,"MONDO:0013964":null,"MONDO:0014108":null,"MONDO:0014166":null,"MONDO:0014221":null,"MONDO:0014245":null,"MONDO:0014394":null,"MONDO:0014487":null,"MONDO:0014804":null,"MONDO:0014985":null,"MONDO:0014986":null,"MONDO:0014987":null,"MONDO:0019107":null,"MONDO:0019531":null,"MONDO:0020721":null,"MONDO:0024553":null,"MONDO:0030436":null,"MONDO:0031071":null,"MONDO:0032668":null,"MONDO:0032669":null,"MONDO:0032670":null,"MONDO:0044309":null,"MONDO:0044310":null,"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0002280"}}}


id: GO:0033774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region in the lower half of some cells formed from extensive infoldings of the basal plasma membrane; includes cytoplasm adjacent to the infolded membrane.","definition_xrefs":["PMID:11640882","GOC:mah","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal labyrinth","termid":"GO:0033774"}


id: PATO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellularity quality inhering in a bearer by virtue of the bearer's consisting of exactly one cell.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellularity","termid":"PATO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unicellular","termid":"PATO:0001994"}


id: MONDO:0035561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sporadic human prion disease (obsolete MONDO:0035561)","secondary_identifiers":["Orphanet:576356"],"synonyms":[{"name":"idiopathic human prion disease","type":"exact"}],"termid":"MONDO:0035561","xrefs":{"Monarch":{"xref_id":"0035561"}}}


id: MOD:00324
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serinyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0319","PubMed:8658134","PubMed:8658132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serinyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-serinyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-O3-serinyl-molybdenum oxide","type":"exact"}],"termid":"MOD:00324"}


id: GO:0015677
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79019],"is_not":false,"summary":null,"term":"GO:0015677"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"copper ion import","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"copper ion uptake","type":"exact"}],"termid":"GO:0015677","terms_by_termid":{"GO:0015677":null}}


id: PBO:0062843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1","termid":"PBO:0062843"}


id: GO:0020007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A group of cytoskeletal structures and associated membrane-bounded organelles found at the anterior end of adult obligate intracellular protozoan parasites in the phylum Apicomplexa. The apical complex is involved in attachment to and penetration of the host cell, and in parasite proliferation.","definition_xrefs":["PMID:16518471","GOC:giardia","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"apical part of cell","termid":"GO:0045177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical complex","termid":"GO:0020007"}


id: PBO:0111916
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus (SURF40 family)","termid":"PBO:0111916"}


id: GO:0018720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + X-phosphate = XH + phenylphosphate.","definition_xrefs":["UM-BBD_reactionID:r0155","PMID:16980461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phenol kinase activity","secondary_identifiers":["MetaCyc:PHENOLPHOS-RXN"],"termid":"GO:0018720"}


id: PBO:0082768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; contributes to SAM complex stability","termid":"PBO:0082768"}


id: MONDO:0020247
data:
  {"annotated_genes":["SJAG_02194","SJAG_02362"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015026"},{"annotations":[86912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957264"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02194":null,"SJAG_02362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"congenital vitreoretinal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98669","UMLS:C3266134","icd11.foundation:44221751","ICD9:743.56","MEDGEN:757909","SCTID:449866003"],"synonyms":[{"name":"vitreoretinal dysplasia","type":"exact"}],"termid":"MONDO:0020247","terms_by_termid":{"MONDO:0015026":null,"MONDO:0957264":null},"xrefs":{"Monarch":{"xref_id":"0020247"}}}


id: PBO:0048856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 1","termid":"PBO:0048856"}


id: PBO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex RNA-binding subunit Rmn1","termid":"PBO:0090428"}


id: PBO:0028764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery_during_cellular_response_to_heat","termid":"PBO:0028764"}


id: PBO:0026729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_stress_during_vegetative_growth","termid":"PBO:0026729"}


id: PBO:0055917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A5, pseudogene","termid":"PBO:0055917"}


id: FYPO:0001133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal DNA replication","termid":"FYPO:0001133"}


id: PBO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 4","termid":"PBO:0060917"}


id: FYPO:0002315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular FPP level","synonyms":[{"name":"normal cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"normal cellular FPP accumulation","type":"related"},{"name":"normal cellular FPP level during mitotic cell cycle","type":"related"},{"name":"normal cellular FPP level during vegetative growth","type":"exact"},{"name":"normal cellular farnesyl diphosphate level","type":"broad"},{"name":"normal cellular farnesyl pyrophosphate level","type":"broad"}],"termid":"FYPO:0002315"}


id: MONDO:0015483
data:
  {"annotated_genes":["SJAG_00731","SJAG_03578","SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[86034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[85709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"}]},"cv_name":"mondo","definition":"A hereditary disorder occurring in two forms: the complete form (Franceschetti's syndrome) is characterized by antimongoloid slant of the palpebral fissures, coloboma of the lower lid, micrognathia and hypoplasia of the zygomatic arches, and microtia. It is transmitted as an autosomal trait. The incomplete form (Treacher Collins syndrome) is characterized by the same anomalies in less pronounced degree. It occurs sporadically, but an autosomal dominant mode of transmission is suspected. (Dorland, 27th ed)","definition_xrefs":["MESH:D008342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00731":null,"SJAG_01444":null,"SJAG_03578":null},"genotype_count":0,"is_obsolete":false,"name":"mandibulofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19980","Orphanet:155899","icd11.foundation:470731247","MedDRA:10051456"],"synonyms":[{"name":"bilateral and symmetric oto-mandibular dysplasia","type":"exact"}],"termid":"MONDO:0015483","terms_by_termid":{"MONDO:0009558":null,"MONDO:0013385":null,"MONDO:0030067":null},"xrefs":{"Monarch":{"xref_id":"0015483"}}}


id: PBO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (predicted)","termid":"PBO:0001006"}


id: GO:1990803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process involved in localizing a protein to the spindle microtubule.","definition_xrefs":["GO_REF:0000060","GOC:rb","PMID:22521784","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in protein localization to spindle microtubule (obsolete GO:1990803)","synonyms":[{"name":"protein amino acid phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localization in spindle microtubule","type":"exact"}],"termid":"GO:1990803"}


id: PBO:0031375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_microtubules","termid":"PBO:0031375"}


id: PBO:0117205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein for Cox2 maturation, human DMAC1 ortholog","termid":"PBO:0117205"}


id: PBO:0061083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 2","termid":"PBO:0061083"}


id: PBO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin ADOP ribosylation factor GTPase activating protein family","termid":"PBO:0002012"}


id: GO:0070881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"proline transport","termid":"GO:0015824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of proline transport","termid":"GO:0070881"}


id: MONDO:0014861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autoimmune disease, multisystem, infantile-onset in which the cause of the disease is a mutation in the ZAP70 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease, multisystem, infantile-onset, 2","secondary_identifiers":["MEDGEN:934735","UMLS:C4310768","OMIM:617006"],"synonyms":[{"name":"ADMIO2","type":"exact"},{"name":"ZAP70 autoimmune disease, multisystem, infantile-onset","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset caused by mutation in ZAP70","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, 2","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, 2; ADMIO2","type":"exact"},{"name":"autoimmune disease, multisystem, infantile-onset, type 2","type":"exact"}],"termid":"MONDO:0014861","xrefs":{"Monarch":{"xref_id":"0014861"}}}


id: GO:1904611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',4,4',5-pentachlorobiphenyl stimulus.","definition_xrefs":["PMID:23196670","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to 3,3',4,4',5-pentachlorobiphenyl","termid":"GO:1904610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 3,3',4,4',5-pentachlorobiphenyl","synonyms":[{"name":"cellular response to PCB 126","type":"exact"}],"termid":"GO:1904611"}


id: GO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a nucleotide to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein nucleotidylation","synonyms":[{"name":"protein amino acid nucleotidylation","type":"exact"}],"termid":"GO:0018175"}


id: GO:0006293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage as well as the unwound DNA. The stabilization of the protein-DNA complex ensures proper positioning of the preincision complex before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0006259","GO:0065003","GO:0044085","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex stabilization","termid":"GO:0006293"}


id: PR:P87041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-N-acetylglucosamine transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.03","secondary_identifiers":["UniProtKB:P87041"],"synonyms":[{"name":"Golgi UDP-Gal transporter (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC1795.03","type":"related"},{"name":"Spom972h-SLC35A3","type":"exact"}],"termid":"PR:P87041"}


id: GO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron development","synonyms":[{"name":"norepinephrine secreting neuron development","type":"exact"}],"termid":"GO:0003358"}


id: GO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of skeletal muscle fiber development. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:lm","GOC:mtg_muscle","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle fiber development","termid":"GO:0048742"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"skeletal muscle fiber development","termid":"GO:0048741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle fiber development","synonyms":[{"name":"activation of skeletal muscle fiber development","type":"narrow"},{"name":"positive regulation of skeletal muscle fibre development","type":"exact"},{"name":"positive regulation of skeletal myofiber development","type":"exact"},{"name":"positive regulation of skeletal myofibre development","type":"exact"},{"name":"stimulation of skeletal muscle fiber development","type":"narrow"},{"name":"up regulation of skeletal muscle fiber development","type":"exact"},{"name":"up-regulation of skeletal muscle fiber development","type":"exact"},{"name":"upregulation of skeletal muscle fiber development","type":"exact"}],"termid":"GO:0048743"}


id: PBO:0113451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; essential for integrity and function of EGO; targeted to vacuole via AP-3 pathway; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0113451"}


id: GO:0090318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of chylomicron remodeling. Chylomicron remodeling is the acquisition, loss or modification of a protein or lipid within a chylomicron, including the hydrolysis of triglyceride by lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"chylomicron remodeling","termid":"GO:0034371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chylomicron remodeling","synonyms":[{"name":"regulation of chylomicron remodelling","type":"exact"}],"termid":"GO:0090318"}


id: PBO:0083651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endocytic site protein required for stress-induced cell elongation; may link the polarization signal with the endocytic machinery to facilitate adaptive morphogenesis under conditions of stress; interacts with the polarity regulator Cdc42p, the SH3 domains of actin patch components and actin filaments; contains a Rho-GAP domain lacking the catalytic arginine finger, PXXP motifs and an xACT (F-actin binding) motif; promoter contains a consensus binding sequence for transcription factor Abf1p","termid":"PBO:0083651"}


id: PBO:0055076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2493","termid":"PBO:0055076"}


id: GO:0021740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pontine nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"principal sensory nucleus of trigeminal nerve development","synonyms":[{"name":"pontine nucleus development","type":"broad"}],"termid":"GO:0021740"}


id: PBO:0066727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 24","termid":"PBO:0066727"}


id: PBO:0005661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no message in thiamine Nmt1","termid":"PBO:0005661"}


id: GO:0016969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An oxygen carrier found in a few groups of invertebrates, e.g. sipunculid worms, certain molluscs, and crustaceans.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete hemerythrin (obsolete GO:0016969)","synonyms":[{"name":"hemerythrin","type":"exact"}],"termid":"GO:0016969"}


id: PBO:0055745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA bladder and prostate cancer suppressor, hnRNPK interacting","termid":"PBO:0055745"}


id: MONDO:0004082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"immature ovarian teratoma","termid":"MONDO:0018369"},{"relation_name":"is_a","term_name":"childhood gonadal germ cell tumor","termid":"MONDO:0020577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood immature teratoma of ovary","secondary_identifiers":["DOID:7037","UMLS:C1332990","MEDGEN:232353","NCIT:C6547"],"synonyms":[{"name":"childhood immature ovarian teratoma","type":"exact"},{"name":"childhood immature teratoma of the ovary","type":"exact"},{"name":"childhood ovarian immature teratoma","type":"exact"},{"name":"immature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric immature ovarian teratoma","type":"exact"},{"name":"paediatric immature teratoma of ovary","type":"exact"},{"name":"paediatric immature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian immature teratoma","type":"exact"},{"name":"pediatric immature ovarian teratoma","type":"exact"},{"name":"pediatric immature teratoma of ovary","type":"exact"},{"name":"pediatric immature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian immature teratoma","type":"exact"}],"termid":"MONDO:0004082","xrefs":{"Monarch":{"xref_id":"0004082"}}}


id: PBO:0041517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15 open reading frame 61","termid":"PBO:0041517"}


id: GO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein serine/threonine phosphatase activity (obsolete GO:0039517)","synonyms":[{"name":"modulation by virus of protein serine/threonine phosphatase activity in host","type":"exact"},{"name":"regulation by virus of host protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0039517"}


id: PBO:0003967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein Oca3/ ER membrane protein complex Ecm2 (predicted)","termid":"PBO:0003967"}


id: MONDO:0009343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","secondary_identifiers":["MESH:C565517","MEDGEN:341065","MESH:C538120","UMLS:C1856111","OMIM:235750"],"synonyms":[{"name":"Hirschsprung disease polydactyly heart disease","type":"related"},{"name":"Hirschsprung disease with ulnar polydactyly, polysyndactyly of big toes, and ventricular septal defect","type":"exact"}],"termid":"MONDO:0009343","xrefs":{"Monarch":{"xref_id":"0009343"}}}


id: PBO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS family histone acetyltransferase subunit Yaf9","termid":"PBO:0001510"}


id: MONDO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial myopathy (obsolete MONDO:0004061)","termid":"MONDO:0004061","xrefs":{"Monarch":{"xref_id":"0004061"}}}


id: GO:0098670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface that mediates/triggers viral entry by endocytosis/pinocytosis or by inducing fusion/penetration.","definition_xrefs":["VZ:3942","PMID:18351291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry receptor-mediated virion attachment to host cell","synonyms":[{"name":"viral attachment to host entry receptor","type":"exact"}],"termid":"GO:0098670"}


id: FYPO:0009005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which microtubule-based movement oscillations occur at a faster speed than normal in a daughter cell that inherits no mitochondria.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased interphase nuclear movement velocity in daughter cell without mitochondria","synonyms":[{"name":"increased interphase nuclear oscillation velocity in daughter cell without mitochondria","type":"exact"}],"termid":"FYPO:0009005"}


id: PBO:0047965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(X)(q22.1) C","termid":"PBO:0047965"}


id: PBO:0068466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 43, pseudogene","termid":"PBO:0068466"}


id: GO:0180012
data:
  {"annotated_genes":["SJAG_03233","SJAG_03226","SJAG_03624","SJAG_03500","SJAG_00527","SJAG_01713","SJAG_03594","SJAG_01412","SJAG_00961","SJAG_04942","SJAG_02865","SJAG_01175","SJAG_00435","SJAG_02720","SJAG_04022","SJAG_02668","SJAG_02037","SJAG_02551","SJAG_01791","SJAG_03126","SJAG_01599","SJAG_03853","SJAG_04587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180034"},{"annotations":[93275,105311,113877,97513,110127,87976,67902,111881,88728,105021,111608,118520,93809,99416,93787,98463,115597,93166,112266,105059,100623,90963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II RNA transcripts by 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31499460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01713":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"cotranscriptional 3'-end processing of RNA polymerase II transcripts","type":"exact"}],"termid":"GO:0180012","terms_by_termid":{"GO:0180010":null,"GO:0180034":null}}


id: PBO:0069926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1218, pseudogene","termid":"PBO:0069926"}


id: FYPO:0006586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the plasma membrane at the tip of a shmoo, or mating projection, is abolished, and the protein is instead detected distributed over a greater area of the plasma membrane than normal.","definition_xrefs":["PomBase:mah","PMID:29134248"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein abnormally dispersed at shmoo tip","termid":"FYPO:0006386"},{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip membrane","termid":"FYPO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to shmoo tip membrane, with protein distributed in plasma membrane","synonyms":[{"name":"abolished protein localisation to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to mating projection tip membrane, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to plasma membrane at shmoo tip, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to shmoo membrane fusion domain, with protein distributed in plasma membrane","type":"exact"},{"name":"abolished protein localization to shmoo projection membrane, with protein distributed in plasma membrane","type":"related"},{"name":"protein localization to shmoo tip membrane abolished, with protein distributed in plasma membrane","type":"related"}],"termid":"FYPO:0006586"}


id: MONDO:0015209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A gastroduodenal malformation that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic gastroduodenal malformation (obsolete MONDO:0015209)","secondary_identifiers":["Orphanet:108963"],"synonyms":[{"name":"isolated gastroduodenal malformation","type":"exact"},{"name":"nonsyndromic gastroduodenal malformation","type":"exact"}],"termid":"MONDO:0015209","xrefs":{"Monarch":{"xref_id":"0015209"}}}


id: FYPO:0001414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sulfide (S2-). Cells stop growing (and may die) at a concentration of sulfide ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to sulfide","synonyms":[{"name":"hypersensitive to sulfide","type":"exact"},{"name":"sensitive to sulfide during mitotic cell cycle","type":"related"},{"name":"sensitive to sulfide during vegetative growth","type":"exact"},{"name":"sensitive to sulfide ions","type":"exact"},{"name":"sensitive to sulphide","type":"exact"}],"termid":"FYPO:0001414"}


id: PBO:0088466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 family DNAJ domain protein Mas5","termid":"PBO:0088466"}


id: MONDO:0014099
data:
  {"annotated_genes":["SJAG_03361"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85367],"is_not":false,"summary":null,"term":"MONDO:0014099"}]},"cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the ARHGDIA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03361":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615244","UMLS:C3808953","GARD:15925","MEDGEN:815283","DOID:0080389"],"synonyms":[{"name":"ARHGDIA nephrotic syndrome","type":"exact"},{"name":"NPHS8","type":"related"},{"name":"nephrotic syndrome caused by mutation in ARHGDIA","type":"exact"},{"name":"nephrotic syndrome, type 8","type":"exact"}],"termid":"MONDO:0014099","terms_by_termid":{"MONDO:0014099":null},"xrefs":{"Monarch":{"xref_id":"0014099"}}}


id: PATO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a insect by virtue of the bearer's being in the chrysalis (cocoon) or post larval stage.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pupal","termid":"PATO:0001187"}


id: FYPO:0004226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which nucleosome binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"},{"relation_name":"is_a","term_name":"abnormal nucleosome binding","termid":"FYPO:0004225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000702","FYPO:0000707"],"is_obsolete":false,"name":"abolished nucleosome binding","synonyms":[{"name":"nucleosome binding abolished","type":"exact"}],"termid":"FYPO:0004226"}


id: MONDO:1010734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic lupus erythematosus that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus, non-human animal","termid":"MONDO:1010118"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, domestic cat","secondary_identifiers":["OMIA:000968-9685"],"termid":"MONDO:1010734","xrefs":{"Monarch":{"xref_id":"1010734"}}}


id: GO:0042123
data:
  {"annotated_genes":["SJAG_01290","SJAG_04483","SJAG_01835","SJAG_00218"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74860,76214,73429,71258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042124"}]},"cv_name":"molecular_function","definition":"Catalysis of the splitting and linkage of glucan molecules, resulting in glucan chain elongation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity","termid":"GO:0016740"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_04483":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucanosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042123","terms_by_termid":{"GO:0042124":null}}


id: MONDO:0004035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign multifocal proliferation of glomus cells forming clusters around dilated vascular spaces.","definition_xrefs":["NCIT:C27496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign perivascular tumor","termid":"MONDO:0003342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glomangiomatosis","secondary_identifiers":["MEDGEN:234311","DOID:6906","UMLS:C1333824"],"termid":"MONDO:0004035","xrefs":{"Monarch":{"xref_id":"0004035"}}}


id: GO:0051145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell; smooth muscle lacks transverse striations in its constituent fibers and are almost always involuntary.","definition_xrefs":["GOC:ai","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell differentiation","synonyms":[{"name":"nonstriated muscle cell differentiation","type":"exact"}],"termid":"GO:0051145"}


id: SO:0000616
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The base where transcription ends.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_end_site","synonyms":[{"name":"transcription end site","type":"exact"}],"termid":"SO:0000616"}


id: GO:0061670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Neurotransmitter secretion that occurs in the presence of the action of a secretagogue or a presynaptic action potential.","definition_xrefs":["GOC:dph","GOC:pad","GOC:PARL","PMID:21334193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"evoked neurotransmitter secretion","synonyms":[{"name":"stimulus-dependant neurotransmitter secretion","type":"exact"}],"termid":"GO:0061670"}


id: PBO:0060317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYLK pseudogene 2","termid":"PBO:0060317"}


id: PBO:0086108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for assembly of U2 snRNP into the spliceosome; forms a complex with Hsh49p and Hsh155p","termid":"PBO:0086108"}


id: GO:1902671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GOC:giardia","GOC:TermGenie","GO_REF:0000064","ISBN:9780124260207","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left anterior flagellum","termid":"GO:0097554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"left anterior basal body","synonyms":[{"name":"cilial basal body of left anterior cilium","type":"exact"},{"name":"cilial basal body of left anterior flagellum","type":"exact"},{"name":"ciliary basal body of left anterior cilium","type":"exact"},{"name":"ciliary basal body of left anterior flagellum","type":"exact"},{"name":"cilium basal body of left anterior cilium","type":"exact"},{"name":"cilium basal body of left anterior flagellum","type":"exact"},{"name":"left anterior flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left anterior cilium","type":"exact"},{"name":"microtubule basal body of left anterior flagellum","type":"exact"}],"termid":"GO:1902671"}


id: PBO:0073425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 1","termid":"PBO:0073425"}


id: GO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-1 (MAML1); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:16510869","CORUM:2949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MAML1-RBP-Jkappa- ICN1 complex","synonyms":[{"name":"MAML1-CSL-ICN1","type":"exact"},{"name":"MAML1-CSL-Notch1 complex","type":"exact"},{"name":"MAML1-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0002193"}


id: GO:2000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of mitotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of mitotic sister chromatid cohesion","termid":"GO:0034184"},{"relation_name":"is_a","term_name":"regulation of maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:2000715"},{"relation_name":"positively_regulates","term_name":"maintenance of mitotic sister chromatid cohesion, arms","termid":"GO:0071959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of mitotic sister chromatid cohesion, arms","synonyms":[{"name":"positive regulation of maintenance of mitotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at mitosis","type":"exact"}],"termid":"GO:2000717"}


id: PBO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteinyl leukotriene receptor 2","termid":"PBO:0044501"}


id: PBO:0036049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_chloride","termid":"PBO:0036049"}


id: GO:0046809
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Globular nuclear domains where the transcription and replication of the viral genome occurs. More than one site can be present simultaneously.","definition_xrefs":["VZ:1951","PMID:9499108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"replication compartment","synonyms":[{"name":"RC","type":"exact"}],"termid":"GO:0046809"}


id: PBO:0031684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peroxisome_degradation","termid":"PBO:0031684"}


id: MONDO:0006266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor occurring in the testis and rarely in the ovary. It is predominantly or completely composed of Leydig cells which may contain crystals of Reinke. In males it usually presents as a painless testicular enlargement and it may be associated with gynecomastia and decreased libido. The majority of the cases have a benign clinical course. Approximately 10% of the cases have a malignant clinical course and metastasize. In females it may be associated with androgenic manifestations and it follows a benign clinical course.","definition_xrefs":["NCIT:C3188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leydig cell tumor","secondary_identifiers":["MESH:D007984","UMLS:C0023601","MEDGEN:9747","DOID:2696","ICDO:8650/1","EFO:1000321"],"synonyms":[{"name":"Leydig cell neoplasm","type":"exact"},{"name":"Leydig cell tumor","type":"exact"},{"name":"Leydig cell tumor, undetermined","type":"related"},{"name":"interstitial cell neoplasm","type":"exact"},{"name":"interstitial cell tumor","type":"exact"},{"name":"interstitial cell tumour","type":"exact"}],"termid":"MONDO:0006266","xrefs":{"Monarch":{"xref_id":"0006266"}}}


id: GO:0003777
data:
  {"annotated_genes":["SJAG_01613","SJAG_04745","SJAG_00332","SJAG_02286","SJAG_01546","SJAG_01297","SJAG_00773","SJAG_02336","SJAG_00851","SJAG_00930","SJAG_00042"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61460],"is_not":false,"summary":null,"term":"GO:0003777"},{"annotations":[97110,99564,66450,95115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008569"},{"annotations":[108583,76285,76115,78189,103866,79252,104068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008574"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microtubule, driven by ATP hydrolysis.","definition_xrefs":["PMID:32684327","PMID:19686686","PMID:32842864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00042":null,"SJAG_00332":null,"SJAG_00773":null,"SJAG_00851":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003774","GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"microtubule motor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-265160","Reactome:R-HSA-177479","Reactome:R-HSA-9610627","GO:1990939"],"synonyms":[{"name":"ATP-dependent microtubule motor activity","type":"exact"},{"name":"axonemal motor activity","type":"narrow"},{"name":"dynein","type":"broad"},{"name":"dynein ATPase activity","type":"narrow"},{"name":"kinesin","type":"broad"},{"name":"kinesin motor activity","type":"narrow"},{"name":"kinetochore motor activity","type":"narrow"}],"termid":"GO:0003777","terms_by_termid":{"GO:0003777":null,"GO:0008569":null,"GO:0008574":null}}


id: RO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_from","termid":"RO:0002202"}


id: GO:0010498
data:
  {"annotated_genes":["SJAG_02651","SJAG_00712","SJAG_05236","SJAG_00300","SJAG_01392","SJAG_04633","SJAG_04335","SJAG_01585","SJAG_00312","SJAG_01535","SJAG_00530","SJAG_05316","SJAG_04572","SJAG_02900","SJAG_00293","SJAG_03763","SJAG_01593","SJAG_00188","SJAG_04144","SJAG_03191","SJAG_00192","SJAG_00052","SJAG_01709","SJAG_00435","SJAG_00790","SJAG_03858","SJAG_01854","SJAG_02502","SJAG_04853","SJAG_00948","SJAG_05252","SJAG_03968","SJAG_00855","SJAG_03350","SJAG_00552","SJAG_01131","SJAG_02341","SJAG_02694","SJAG_04211","SJAG_03153","SJAG_04309","SJAG_04306","SJAG_04661","SJAG_04520","SJAG_05274","SJAG_03321","SJAG_01489","SJAG_01678","SJAG_04583","SJAG_00778","SJAG_04540","SJAG_04541","SJAG_01497","SJAG_03638","SJAG_01068","SJAG_03219","SJAG_03651","SJAG_05022","SJAG_04484","SJAG_03151","SJAG_04384","SJAG_02197","SJAG_00071","SJAG_01528","SJAG_00146","SJAG_00666","SJAG_01134","SJAG_03227","SJAG_04612","SJAG_02539","SJAG_00931","SJAG_00738","SJAG_01637","SJAG_04539","SJAG_03680","SJAG_04151","SJAG_04345","SJAG_00766","SJAG_00403","SJAG_03454","SJAG_01022","SJAG_02562","SJAG_03699","SJAG_02162","SJAG_03032","SJAG_00475","SJAG_00452","SJAG_01074","SJAG_01886","SJAG_01858","SJAG_01544","SJAG_02041","SJAG_02822","SJAG_02186","SJAG_00627","SJAG_05329","SJAG_03351","SJAG_00808","SJAG_01556","SJAG_00591","SJAG_02992","SJAG_00837","SJAG_04888","SJAG_03561","SJAG_00054","SJAG_04904","SJAG_00341","SJAG_02705","SJAG_03615","SJAG_03575","SJAG_00131","SJAG_02591","SJAG_01626","SJAG_04477","SJAG_01472","SJAG_00762","SJAG_04619","SJAG_03417","SJAG_01737","SJAG_02419","SJAG_01656","SJAG_00126","SJAG_01203","SJAG_02485","SJAG_03657","SJAG_00681","SJAG_02774","SJAG_01051","SJAG_03408","SJAG_04655","SJAG_03841","SJAG_04357","SJAG_01617","SJAG_01760","SJAG_03048","SJAG_01679","SJAG_01210","SJAG_01768","SJAG_01956","SJAG_03037","SJAG_00173","SJAG_03175","SJAG_03385","SJAG_02685","SJAG_03345","SJAG_00642","SJAG_02625","SJAG_01253","SJAG_00128","SJAG_07000","SJAG_00644","SJAG_04088","SJAG_04229","SJAG_00941","SJAG_02244","SJAG_04429","SJAG_01900","SJAG_02723","SJAG_04573","SJAG_04969","SJAG_03809","SJAG_01467","SJAG_01014","SJAG_00651","SJAG_02021"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60972,71079,79319,79445,73406,112524,74274,107912,70612,95501,78092,76906,114571,105187,80315,58025,80687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031145"},{"annotations":[114713],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[110052,109949,108317,110644,113926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"},{"annotations":[105053,79061,79925,78883,107986,116157,71049,73892,74762,79008,71009,95055,108422,112287,71600,89887,78848,105137,95322,98167,72743,75170,116891,91742,108486,70990,98547,93914,101092,103242,117453,88135,76766,79078,71271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036503"},{"annotations":[113289,103724,89601,88136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180027"},{"annotations":[102677],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905785"},{"annotations":[77769,78420],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904293"},{"annotations":[107268,77665],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0032435"},{"annotations":[76898,111167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071630"},{"annotations":[89286],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905786"},{"annotations":[61571,67264,65879,67652,68534,69070],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901800"},{"annotations":[109208,102699,106975,112022,117370],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032436"},{"annotations":[79340,77282,71066,75642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010499"},{"annotations":[79363,96145,78380,104676,106773,72517,109552,76808,78483,80342,80706,78758,99959,72276,116691,78237,115566,95323,71218,94496,109620,112009,113429,99132,79923,101971,111028,75748,72648,73299,88922,71487,78719,74601,71699,115427,79987,77655,79661,111457,114556,73455,75499,96565,98723,73990,117500,72875,66324,93696,70395,80201,98034,102422,63675,118313,72075,101509,70152,79059,79228,113121,111467,66542,79479,78297,88634,94858,77413,94336,67168,74515,76092,77725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043161"},{"annotations":[114932],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032434"},{"annotations":[79448,75852],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030970"},{"annotations":[89605,104289,76962,70204,105138,115714,97033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990116"},{"annotations":[95874,102427,94688,107541,117147,105192,74558,98783,109397,80619,104911,98101,72224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031146"},{"annotations":[93891,96041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"},{"annotations":[97275,74731,64802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071596"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic 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protein catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"proteasome-mediated protein catabolic process","type":"exact"},{"name":"proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:0010498","terms_by_termid":{"GO:0010499":null,"GO:0030970":null,"GO:0031145":null,"GO:0031146":null,"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0036503":null,"GO:0043161":null,"GO:0071596":null,"GO:0071629":null,"GO:0071630":null,"GO:0097466":null,"GO:0140708":null,"GO:0180027":null,"GO:1901800":null,"GO:1904293":null,"GO:1905785":null,"GO:1905786":null,"GO:1990116":null}}


id: GO:0030700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses glycine reductase activity; usually comprises three subunits, of which two are selenoproteins; the subunits are typically designated selenoprotein A, selenoprotein B and protein C.","definition_xrefs":["GOC:mah","PMID:2018775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"glycine reductase complex","termid":"GO:0030700"}


id: PBO:0004000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin Trx2","termid":"PBO:0004000"}


id: GO:0015549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of carbonyl cyanide m-chlorophenylhydrazone from one side of a membrane to the other. Carbonyl cyanide m-chlorophenylhydrazone is a proton ionophore, commonly used as an uncoupling agent and inhibitor of photosynthesis because of its effects on mitochondrial and chloroplast membranes.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbonyl cyanide m-chlorophenylhydrazone transmembrane transporter activity (obsolete GO:0015549)","synonyms":[{"name":"CCCP transporter activity","type":"exact"},{"name":"carbonyl cyanide m-chlorophenylhydrazone transporter activity","type":"related"},{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"related"}],"termid":"GO:0015549"}


id: MONDO:0002470
data:
  {"annotated_genes":["SJAG_00995","SJAG_01207","SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[85647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[85648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","definition":"A trichothiodystrophy that is photosensitive, and caused by defects in the NER pathway","definition_xrefs":["Wikipedia:Trichothiodystrophy#Photosensitive_forms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"photosensitive trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2960","NCIT:C4924","Orphanet:453","NANDO:1200626","UMLS:C1848412","MEDGEN:336339"],"synonyms":[{"name":"IBIDS syndrome","type":"exact"},{"name":"Ichtyosis, brittle hair, intellectual impairment, decreased fertility, and short stature","type":"related"},{"name":"Tay syndrome","type":"exact"},{"name":"sulfur-deficient brittle hair syndrome","type":"exact"},{"name":"trichothiodystrophy","type":"broad"},{"name":"trichothiodystrophy with congenital ichthyosis","type":"broad"},{"name":"trichothiodystrophy with congenital ichtyosis","type":"related"}],"termid":"MONDO:0002470","terms_by_termid":{"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0002470"}}}


id: GO:2001166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H2B ubiquitination.","definition_xrefs":["PMID:12876293"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H2B ubiquitination (obsolete GO:2001166)","termid":"GO:2001166"}


id: PBO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 2","termid":"PBO:0043507"}


id: PBO:0003914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR92","termid":"PBO:0003914"}


id: GO:1900582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving o-orsellinic acid.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"o-orsellinic acid metabolic process","synonyms":[{"name":"o-orsellinic acid metabolism","type":"exact"}],"termid":"GO:1900582"}


id: PBO:0113371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with structural similarity to lipid transport protein Vps13p; localizes to multiple membrane contact sites between organelles including mitochondria–ER contact sites; non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113371"}


id: GO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of internal peptidyl-1-thioglycine, which has an internal C=S bond, instead of an internal C=O bond, in the peptide.","definition_xrefs":["RESID:AA0265","PMID:10660523","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-1-thioglycine biosynthetic process, internal (obsolete GO:0019920)","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, internal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, internal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, internal","type":"exact"}],"termid":"GO:0019920"}


id: PR:Q09893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.05","synonyms":[{"name":"Spom972h-SPAC24B11.05","type":"exact"}],"termid":"PR:Q09893"}


id: PBO:0047786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D4 like 3","termid":"PBO:0047786"}


id: PBO:0026861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_centromeric_chromatin","termid":"PBO:0026861"}


id: PBO:0090260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan 1,3-beta-glucosidase Exg3","termid":"PBO:0090260"}


id: PR:G2TRN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.01 gene.","definition_xrefs":["UniProtKB:G2TRN6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl-alcohol dehydrogenase C750.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.01","synonyms":[{"name":"Spom972h-SPAC750.01","type":"exact"}],"termid":"PR:G2TRN6"}


id: SO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute to describe a feature that is independently known - not predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"independently_known","synonyms":[{"name":"independently known","type":"exact"}],"termid":"SO:0000906"}


id: PBO:0015704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1 subfamily, Sds21","termid":"PBO:0015704"}


id: FYPO:0000270
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119659,119647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to osmotic stress","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"hypersensitive to osmotic stress","type":"exact"},{"name":"osmotic stress resistance: decreased","type":"related"},{"name":"sensitive to osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000270","terms_by_termid":{"FYECO:0000207":null,"FYPO:0000271":null,"FYPO_EXT:0000001":null}}


id: PBO:0051156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-36 (pseudogene)","termid":"PBO:0051156"}


id: MONDO:0015961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary head and neck malformation (obsolete MONDO:0015961)","secondary_identifiers":["Orphanet:183583"],"synonyms":[{"name":"genetic head and neck malformation","type":"exact"}],"termid":"MONDO:0015961","xrefs":{"Monarch":{"xref_id":"0015961"}}}


id: MONDO:0012412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any classic complement early component deficiency in which the cause of the disease is a mutation in the C7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"immunodeficiency due to a late component of complement deficiency","termid":"MONDO:0015700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"complement component 7 deficiency","secondary_identifiers":["OMIM:610102","DOID:0060300","UMLS:C1864694","MEDGEN:355270","MESH:C566443","NANDO:2200785","GARD:18290"],"synonyms":[{"name":"C7 classic complement early component deficiency","type":"exact"},{"name":"C7 deficiency","type":"related"},{"name":"C7D","type":"related"},{"name":"classic complement early component deficiency caused by mutation in C7","type":"exact"},{"name":"complement component 7 deficiency","type":"exact"}],"termid":"MONDO:0012412","xrefs":{"Monarch":{"xref_id":"0012412"}}}


id: GO:0061404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to increased salt (obsolete GO:0061404)","termid":"GO:0061404"}


id: MONDO:0035863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome-intellectual disability (obsolete MONDO:0035863)","secondary_identifiers":["Orphanet:611327"],"termid":"MONDO:0035863","xrefs":{"Monarch":{"xref_id":"0035863"}}}


id: GO:0019307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"mannose biosynthetic process","synonyms":[{"name":"mannose anabolism","type":"exact"},{"name":"mannose biosynthesis","type":"exact"},{"name":"mannose formation","type":"exact"},{"name":"mannose synthesis","type":"exact"}],"termid":"GO:0019307"}


id: PBO:0045857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 47","termid":"PBO:0045857"}


id: PBO:0071838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 33","termid":"PBO:0071838"}


id: PBO:0000829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ryh1","termid":"PBO:0000829"}


id: MOD:01560
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01560"}


id: PBO:0068534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 136, pseudogene","termid":"PBO:0068534"}


id: MONDO:0006035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of gastric adenocarcinoma characterized by prominent dilated or slit-like tubules.","definition_xrefs":["NCIT:C5473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric adenocarcinoma","termid":"MONDO:0005036"},{"relation_name":"is_a","term_name":"tubular adenocarcinoma","termid":"MONDO:0005606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric tubular adenocarcinoma","secondary_identifiers":["MEDGEN:234303","EFO:1000030","UMLS:C1333791","ONCOTREE:TSTAD","DOID:6595"],"synonyms":[{"name":"gastric tubular adenocarcinoma","type":"exact"},{"name":"stomach tubular adenocarcinoma","type":"exact"},{"name":"tubular adenocarcinoma of stomach","type":"exact"},{"name":"tubular adenocarcinoma of the stomach","type":"exact"},{"name":"tubular stomach adenocarcinoma","type":"related"}],"termid":"MONDO:0006035","xrefs":{"Monarch":{"xref_id":"0006035"}}}


id: PBO:0114072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily A member 2, pseudogene","termid":"PBO:0114072"}


id: PBO:0067047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 67, pseudogene","termid":"PBO:0067047"}


id: MONDO:0016855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mowat-Wilson syndrome","termid":"MONDO:0009341"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0002320"],"is_obsolete":false,"name":"Mowat-Wilson syndrome due to monosomy 2q22","secondary_identifiers":["MEDGEN:1723926","GARD:17248","UMLS:C5437617","Orphanet:261537"],"synonyms":[{"name":"Hirschsprung disease and intellectual disability due to 2q22 microdeletion","type":"exact"},{"name":"Hirschsprung disease and intellectual disability due to del(2)(q22)","type":"exact"},{"name":"Hirschsprung disease and intellectual disability due to monosomy 2q22","type":"exact"},{"name":"Mowat-Wilson syndrome due to 2q22 microdeletion","type":"exact"},{"name":"Mowat-Wilson syndrome due to del(2)q(22)","type":"exact"},{"name":"Mowat-Wilson syndrome due to monosomy type 2q22","type":"exact"}],"termid":"MONDO:0016855","xrefs":{"Monarch":{"xref_id":"0016855"}}}


id: GO:0031825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1F serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1F serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 1F receptor binding","type":"exact"},{"name":"type 1F serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031825"}


id: FYPO:0001547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to zinc ion starvation","synonyms":[{"name":"increased RNA accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"increased RNA level during cellular response to zinc ion depletion","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion deprivation","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion limitation","type":"exact"},{"name":"increased RNA level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to zinc starvation","type":"exact"},{"name":"increased mRNA level during cellular response to zinc ion starvation","type":"narrow"},{"name":"increased transcript level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0001547"}


id: GO:0043231
data:
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id: GO:0097218
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id: MONDO:0020427
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laubry-Pezzi syndrome is a rare, non-syndromic, congenital heart malformation characterized by the prolapse of an aortic valve cusp into a subjacent ventricular septal defect due to Venturi effect, resulting in aortic regurgitation. Patients typically present with symptoms of progressive aortic valve insufficiency, such as shortness of breath, heart palpitations, chest pain and exercise intolerance.","definition_xrefs":["Orphanet:99094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laubry-Pezzi syndrome","secondary_identifiers":["MEDGEN:1643612","UMLS:C4707235","GARD:19646","SCTID:764955006"],"synonyms":[{"name":"VSD with aortic insufficiency","type":"exact"},{"name":"ventricular septal defect with aortic insufficiency","type":"exact"}],"termid":"MONDO:0020427","xrefs":{"Monarch":{"xref_id":"0020427"}}}


id: PBO:0070163
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id: PBO:0072717
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id: PBO:0048114
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id: PBO:0059484
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id: SO:0001589
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id: PBO:0061249
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id: PBO:0073374
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id: GO:2000037
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id: FYPO:0002433
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id: PBO:0070680
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id: PBO:0064108
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id: GO:0035865
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id: PBO:0034378
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id: FYPO:0004656
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id: GO:1900886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane biosynthetic process","termid":"GO:1900884"},{"relation_name":"is_a","term_name":"positive regulation of tridecane metabolic process","termid":"GO:1900895"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tridecane biosynthetic process","synonyms":[{"name":"activation of tridecane anabolism","type":"narrow"},{"name":"activation of tridecane biosynthesis","type":"narrow"},{"name":"activation of tridecane biosynthetic process","type":"narrow"},{"name":"activation of tridecane formation","type":"narrow"},{"name":"activation of tridecane synthesis","type":"narrow"},{"name":"positive regulation of tridecane anabolism","type":"exact"},{"name":"positive regulation of tridecane biosynthesis","type":"exact"},{"name":"positive regulation of tridecane formation","type":"exact"},{"name":"positive regulation of tridecane synthesis","type":"exact"},{"name":"up regulation of tridecane anabolism","type":"exact"},{"name":"up regulation of tridecane biosynthesis","type":"exact"},{"name":"up regulation of tridecane biosynthetic process","type":"exact"},{"name":"up regulation of tridecane formation","type":"exact"},{"name":"up regulation of tridecane synthesis","type":"exact"},{"name":"up-regulation of tridecane anabolism","type":"exact"},{"name":"up-regulation of tridecane biosynthesis","type":"exact"},{"name":"up-regulation of tridecane biosynthetic process","type":"exact"},{"name":"up-regulation of tridecane formation","type":"exact"},{"name":"up-regulation of tridecane synthesis","type":"exact"},{"name":"upregulation of tridecane anabolism","type":"exact"},{"name":"upregulation of tridecane biosynthesis","type":"exact"},{"name":"upregulation of tridecane biosynthetic process","type":"exact"},{"name":"upregulation of tridecane formation","type":"exact"},{"name":"upregulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900886"}


id: PBO:0051177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-65 (pseudogene)","termid":"PBO:0051177"}


id: FYPO:0007152
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to camphor. Cells stop growing (and may die) at a concentration of camphor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to camphor","synonyms":[{"name":"hypersensitive to camphor","type":"exact"},{"name":"sensitive to camphor during mitotic cell cycle","type":"related"},{"name":"sensitive to camphor during vegetative growth","type":"exact"}],"termid":"FYPO:0007152"}


id: MONDO:0019908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 15 is a chromosome abnormality that affects growth, learning, and speech. People with ring chromosome 15 often have growth delays before and after birth, resulting in short stature; varying degrees of intellectual disability ; low muscle tone (hypotonia); craniofacial malformations; and limb abnormalities. Other symptoms might include congenital heart defects, kidney problems, congenital dislocation of the hips, and cafe-au-lait spots. Ring chromosome 15 is caused by an abnormal chromosome known as a ring chromosome 15 or r(15). A ring chromosome is a circular structure that occurs when a chromosome breaks in two places and the broken ends fuse together. The features of ring chromosome 15 appear to result from the loss (deletion) of genetic material from the long (q) arm of chromosome 15. Ring chromosome 15 is usually caused by spontaneous (de novo) errors very early in embryonic development. In rare cases, it is passed through families, either from a parent who also has a ring chromosome 15, or from a parent who has a balanced translocation. Treatment for ring chromosome 15 is focused on addressing the symptoms present in each individual and may require a team of medical specialists.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 15","secondary_identifiers":["Orphanet:96177","MEDGEN:1646359","GARD:1328","MESH:C538035","NORD:941","SCTID:763405000","UMLS:C0795855"],"synonyms":[{"name":"Chromosome 15 Ring","type":"exact"},{"name":"R15","type":"related"},{"name":"Ring 15","type":"related"},{"name":"Ring chromosome 15 syndrome","type":"related"},{"name":"Ring chromosome type 15","type":"exact"},{"name":"chromosome 15 ring","type":"related"}],"termid":"MONDO:0019908","xrefs":{"Monarch":{"xref_id":"0019908"}}}


id: PR:O42903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rud3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain-containing protein C119.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.12","synonyms":[{"name":"Spom972h-rud3","type":"exact"}],"termid":"PR:O42903"}


id: MONDO:1011060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, sheep","secondary_identifiers":["OMIA:000807-9940"],"termid":"MONDO:1011060","xrefs":{"Monarch":{"xref_id":"1011060"}}}


id: PBO:0078617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 66","termid":"PBO:0078617"}


id: FYPO:0002396
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"normal maintenance of protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal maintenance of protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal maintenance of protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002396"}


id: PATO:0000902
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000902 chinsurah boro type value (obsolete PATO:0000902)","termid":"PATO:0000902"}


id: GO:0003046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intrinsic circulatory process resulting from stress relaxation that modulates the force with which blood travels through the systemic arterial circulatory system. Stress relaxation is the adaptation of vessels to a new size as a result of changes in pressure in storage areas such as veins, the liver, the spleen, and the lungs.","definition_xrefs":["GOC:mtg_cardio","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by physical factors","termid":"GO:0003045"},{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by stress relaxation","synonyms":[{"name":"blood pressure regulation by stress relaxation","type":"exact"}],"termid":"GO:0003046"}


id: GO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-isopropylammelide + H2O = cyanuric acid + isopropylamine.","definition_xrefs":["EC:3.5.4.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"N-isopropylammelide isopropylaminohydrolase activity","secondary_identifiers":["RHEA:23608","MetaCyc:R123-RXN","UM-BBD_enzymeID:r0115"],"synonyms":[{"name":"AtzC","type":"related"}],"termid":"GO:0018764"}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: PBO:0064269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G3","termid":"PBO:0064269"}


id: MONDO:0859190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurodevelopmental-craniofacial syndrome with variable renal and cardiac abnormalities","secondary_identifiers":["MEDGEN:1794194","UMLS:C5561984","OMIM:619522"],"synonyms":[{"name":"ZMYM2-related neurodevelopmental disorder with multiple anomalies","type":"exact"}],"termid":"MONDO:0859190","xrefs":{"Monarch":{"xref_id":"0859190"}}}


id: FYPO:0000869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation occurs to a greater extent than normal. All histone methylation may be affected, or methylation of specific sites on specific histones may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone methylation during vegetative growth","synonyms":[{"name":"increased histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000869"}


id: PBO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_localization","termid":"PBO:0006193"}


id: PBO:0108953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM69 pseudogene 1","termid":"PBO:0108953"}


id: FYPO:0006681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:19111658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0000892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K9 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006681"}


id: GO:0009970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfate.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfate starvation","synonyms":[{"name":"cellular response to sulphate starvation","type":"exact"}],"termid":"GO:0009970"}


id: PR:Q10070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.04c","synonyms":[{"name":"Spom972h-mdm31","type":"exact"}],"termid":"PR:Q10070"}


id: GO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity.","definition_xrefs":["PMID:20160973","GOC:ems","GOC:jl","ISBN:0395448956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavior","secondary_identifiers":["Wikipedia:Behavior","GO:0044708","GO:0023032","GO:0044709"],"synonyms":[{"name":"behavioral response to stimulus","type":"exact"},{"name":"behaviour","type":"exact"},{"name":"behavioural response to stimulus","type":"exact"},{"name":"single-organism behavior","type":"related"}],"termid":"GO:0007610"}


id: PBO:0045812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 2","termid":"PBO:0045812"}


id: GO:0097638
data:
  {"annotated_genes":["SJAG_00991","SJAG_05346","SJAG_02605","SJAG_03591","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100681],"is_not":false,"summary":null,"term":"GO:0097638"},{"annotations":[92081,110850,93675,99204],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04637":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090467","GO:1902765"],"synonyms":[{"name":"L-arginine import into cell","type":"exact"},{"name":"arginine import","type":"broad"}],"termid":"GO:0097638","terms_by_termid":{"GO:0097638":null,"GO:1905589":null}}


id: PBO:0089787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein, G-patch domain, PINX1 family Pxr1","termid":"PBO:0089787"}


id: PBO:0081220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMPSTE24 divergent transcript","termid":"PBO:0081220"}


id: GO:0102119
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A20 + S-adenosyl-L-methionine = gibberellin A20 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A20 carboxyl methyltransferase activity (obsolete GO:0102119)","termid":"GO:0102119"}


id: PBO:0064797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase methylesterase 1","termid":"PBO:0064797"}


id: SO:1000100
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":".","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000100 mutation_causing_polypeptide_N_terminal_elongation (obsolete SO:1000100)","synonyms":[{"name":"mutation causing polypeptide N terminal elongation","type":"exact"},{"name":"polypeptide N-terminal elongation","type":"exact"}],"termid":"SO:1000100"}


id: PBO:0031320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_pravastatin","termid":"PBO:0031320"}


id: PBO:0027175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_septated_vegetative_cell","termid":"PBO:0027175"}


id: PR:Q9UTI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A gammaproteobacterial-type dihydroorotase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroorotase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16.03c","secondary_identifiers":["UniProtKB:Q9UTI0"],"synonyms":[{"name":"DHOase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gammaproteo-pyrC","type":"exact"}],"termid":"PR:Q9UTI0"}


id: GO:0097632
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94958],"is_not":false,"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of the phagophore assembly site membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"phagophore assembly site membrane","termid":"GO:0034045"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000407"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0000407","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of phagophore assembly site membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic component of pre-autophagosomal structure membrane","type":"narrow"},{"name":"extrinsic to phagophore assembly site membrane","type":"exact"},{"name":"phagophore assembly site peripheral membrane","type":"related"}],"termid":"GO:0097632","terms_by_termid":{"GO:0097632":null}}


id: FYPO:0004034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased glutathione transferase activity","synonyms":[{"name":"reduced glutathione transferase activity","type":"exact"}],"termid":"FYPO:0004034"}


id: PR:Q9UTN4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylation factor subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.14c","synonyms":[{"name":"Spom972h-pfs2","type":"exact"}],"termid":"PR:Q9UTN4"}


id: PBO:0069677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 954, pseudogene","termid":"PBO:0069677"}


id: GO:0062116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chloroplast-derived plastid in which the solid form of phenol is stored.","definition_xrefs":["PMID:24683183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"phenyloplast","termid":"GO:0062116"}


id: PBO:0077758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20L divergent transcript","termid":"PBO:0077758"}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: FYPO:0004839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abolished when the cell is subject to glucose starvation, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose depletion","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose deprivation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose limitation","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"}],"termid":"FYPO:0004839"}


id: PBO:0058911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12129","termid":"PBO:0058911"}


id: PBO:0074730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 88","termid":"PBO:0074730"}


id: PBO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.38","termid":"PBO:0005068"}


id: PBO:0034457
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_MCB_promoters","termid":"PBO:0034457"}


id: SO:1000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000094 sequence_variant_causing_conservative_amino_acid_substitution (obsolete SO:1000094)","synonyms":[{"name":"mutation causing conservative amino acid substitution","type":"related"},{"name":"sequence variant causing conservative amino acid substitution","type":"exact"}],"termid":"SO:1000094"}


id: GO:1990056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the phosphorylation of an amino acid residue in a substrate protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP, thereby targeting the substrate to the proteasomal ubiquitin mediated protein catabolic process.","definition_xrefs":["PMID:21993622","PMID:21098119","PMID:23264631"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase activity required for targeting substrate to proteasomal ubiquitin-dependent protein catabolic process (obsolete GO:1990056)","synonyms":[{"name":"protein kinase activity required for targeting substrate to proteasomal ubiquitin-dependent protein catabolic process","type":"exact"}],"termid":"GO:1990056"}


id: SO:0002146
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 7th residue (a lysine), from the start of the H2AZ histone protein is acetylated.","definition_xrefs":["PMID:24316985","PMID:27087541","PMID:19385636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2AZ_acetylation_site","termid":"SO:0002144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2AZK7_acetylation_site","synonyms":[{"name":"H2A.ZK7ac","type":"exact"},{"name":"H2AZK7 acetylation site","type":"exact"},{"name":"H2AZK7ac","type":"exact"}],"termid":"SO:0002146"}


id: PBO:0058377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4749","termid":"PBO:0058377"}


id: MONDO:0010704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The mildest form of otopalatodigital syndrome spectrum disorder that is characterized by a generalized skeletal dysplasia, mild intellectual disability, conductive hearing loss, and typical facial anomalies.","definition_xrefs":["Orphanet:90650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 1","secondary_identifiers":["DOID:0111783","GARD:5121","UMLS:C0265251","icd11.foundation:1442049882","OMIM:311300","SCTID:54036001","ICD9:759.89","NCIT:C118845","MEDGEN:78542"],"synonyms":[{"name":"OPD 1 syndrome","type":"exact"},{"name":"OPD I syndrome","type":"exact"},{"name":"OPD syndrome","type":"related"},{"name":"OPD syndrome 1","type":"exact"},{"name":"OPD1","type":"exact"},{"name":"Taybi syndrome","type":"exact"},{"name":"frontootopalatodigital osteodysplasia","type":"related"},{"name":"oto-palato-digital syndrome type 1","type":"exact"},{"name":"otopalatodigital spectrum disorder","type":"related"},{"name":"otopalatodigital syndrome, type 1","type":"exact"},{"name":"otopalatodigital syndrome, type I","type":"exact"},{"name":"otopalatodigital syndrome, type I, X-linked dominant","type":"exact"}],"termid":"MONDO:0010704","xrefs":{"Monarch":{"xref_id":"0010704"}}}


id: MONDO:0018824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyoderma gangrenosum (PG) is a primarily sterile inflammatory neutrophilic dermatosis characterized by recurrent cutaneous ulcerations with a mucopurulent or hemorrhagic exudate.","definition_xrefs":["Orphanet:48104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pyoderma gangrenosum","secondary_identifiers":["ICD9:686.01","NORD:1638","UMLS:C0085652","MESH:D017511","MedDRA:10037635","DOID:8553","SCTID:74578003","icd11.foundation:2120746218","NANDO:2200437","MEDGEN:43224","ICD10CM:L88","GARD:7510"],"termid":"MONDO:0018824","xrefs":{"Monarch":{"xref_id":"0018824"}}}


id: MONDO:0012547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the SOS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 4","secondary_identifiers":["GARD:10699","MEDGEN:339908","OMIM:610733","UMLS:C1853120","DOID:0060582","MESH:C548082","NCIT:C176932"],"synonyms":[{"name":"NS4","type":"exact"},{"name":"Noonan syndrome 4","type":"exact"},{"name":"Noonan syndrome caused by mutation in SOS1","type":"exact"},{"name":"Noonan syndrome type 4","type":"exact"},{"name":"SOS1 Noonan syndrome","type":"exact"},{"name":"SOS1 gene related Noonan syndrome","type":"related"}],"termid":"MONDO:0012547","xrefs":{"Monarch":{"xref_id":"0012547"}}}


id: MONDO:0007486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder with an autosomal dominant pattern of inheritance with variable penetrance. It was initially described among Native Americans belonging to the Haliwa-Saponi tribe of northeastern North Carolina. It is caused by a duplication of chromosomal DNA at 4q35. Clinical signs present in early childhood and include asymptomatic plaques of the epibulbar conjunctivae and oral mucosa. Clinical progression of the plaques to malignancy has not been reported.","definition_xrefs":["NCIT:C3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary benign intraepithelial dyskeratosis","secondary_identifiers":["UMLS:C0265966","OMIM:127600","SCTID:400014002","GARD:17524","icd11.foundation:2059594980","MEDGEN:75588","MESH:C562551","Orphanet:352657"],"synonyms":[{"name":"Dkbi","type":"related"},{"name":"HBID","type":"exact"},{"name":"Witkop-Von Sallmann disease","type":"exact"},{"name":"dyskeratosis, hereditary benign intraepithelial","type":"related"},{"name":"hereditary benign corneal intraepithelial dyskeratosis","type":"exact"}],"termid":"MONDO:0007486","xrefs":{"Monarch":{"xref_id":"0007486"}}}


id: GO:0005221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when intracellular cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"cyclic nucleotide-activated monoatomic ion channel activity","termid":"GO:0043855"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","secondary_identifiers":["Reactome:R-HSA-2514867"],"synonyms":[{"name":"intracellular cyclic nucleotide activated cation channel activity","type":"broad"},{"name":"intracellular cyclic nucleotide activated monoatomic cation channel activity","type":"exact"},{"name":"intracellular cyclic nucleotide-activated monoatomic cation channel activity","type":"exact"}],"termid":"GO:0005221"}


id: FYPO:0007974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization occurs at a higher rate, or speed, than normal for microtubules with their plus ends inside the nuclear membrane bridge formed during mitotic anaphase B.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of interpolar microtubule polymerization inside the mitotic nuclear membrane bridge","termid":"FYPO:0007974"}


id: GO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a peg-like structure for the purpose of penetration into its host organism, which penetrates through the host cuticle and epidermal cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:26441323","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration peg formation","secondary_identifiers":["GO:0075057"],"synonyms":[{"name":"formation of symbiont penetration peg for entry into host","type":"related"},{"name":"initiation of symbiont penetration peg","type":"narrow"},{"name":"symbiont penetration peg formation for entry into host","type":"related"},{"name":"symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075053"}


id: FYPO:0004563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha-galactosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal alpha-galactosidase activity","termid":"FYPO:0004563"}


id: FYPO:0009045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and potassium chloride than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to calcofluor and potassium chloride","synonyms":[{"name":"resistance to calcofluor and potassium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and potassium chloride during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and potassium chloride in combination","type":"exact"},{"name":"resistant to calcofluor and potassium chloride","type":"exact"}],"termid":"FYPO:0009045"}


id: PBO:0079275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription termination factor 1","termid":"PBO:0079275"}


id: GO:0140756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the proteasome.","definition_xrefs":["PMID:28583440","PMID:29652515","PMID:28525752","PMID:10500111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of proteasome","termid":"GO:0140756"}


id: PBO:0086498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative plasma membrane permease; proposed to be involved in carboxylic acid uptake and repressed by thiamine; substrate of Dbf2p/Mob1p kinase; transcription is altered if mitochondrial dysfunction occurs","termid":"PBO:0086498"}


id: PBO:0029319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat","termid":"PBO:0029319"}


id: MONDO:0012132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any colorectal cancer in which the cause of the disease is a mutation in the GALNT12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 1","secondary_identifiers":["OMIM:608812","MEDGEN:324734","UMLS:C1837315"],"synonyms":[{"name":"CRCS1","type":"related"},{"name":"GALNT12 colorectal cancer","type":"exact"},{"name":"colorectal adenoma and cancer, susceptibility to","type":"related"},{"name":"colorectal cancer caused by mutation in GALNT12","type":"exact"},{"name":"colorectal cancer, susceptibility to, 1","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 9","type":"related"},{"name":"colorectal cancer, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to colorectal cancer 1","type":"related"}],"termid":"MONDO:0012132","xrefs":{"Monarch":{"xref_id":"0012132"}}}


id: PBO:0070973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 11","termid":"PBO:0070973"}


id: GO:0070451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin cell projection that contains F-actin and tubulin, with microtubules centrally located and F-actin peripherally located.","definition_xrefs":["PMID:11526084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell hair","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"imaginal disc-derived wing hair","type":"narrow"},{"name":"non-sensory hair","type":"exact"}],"termid":"GO:0070451"}


id: PBO:0056739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase 2","termid":"PBO:0056739"}


id: PBO:0077405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM139 antisense RNA 1","termid":"PBO:0077405"}


id: GO:0035840
data:
  {"annotated_genes":["SJAG_00152","SJAG_03119","SJAG_02916","SJAG_02838","SJAG_04566","SJAG_01196","SJAG_00424","SJAG_02222","SJAG_01290","SJAG_04901","SJAG_00030","SJAG_04058"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89101,89774,91923,97199,99646,103379,104967,106424,113082,114347,114681],"is_not":false,"summary":null,"term":"GO:0035840"},{"annotations":[111070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035842"}]},"cv_name":"cellular_component","definition":"A cell tip which has existed for at least one complete cell cycle, and at which polarized growth occurs. For example, in fission yeast the cell end that existed prior to cell division grows immediately after division, and contains a distinctive complement of proteins including actin cytoskeletal structures.","definition_xrefs":["GOC:expert_jd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growing cell tip","termid":"GO:0035838"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00152":null,"SJAG_00424":null,"SJAG_01196":null,"SJAG_01290":null,"SJAG_02222":null,"SJAG_02838":null,"SJAG_02916":null,"SJAG_03119":null,"SJAG_04058":null,"SJAG_04566":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"old growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"old growing cell end","type":"exact"}],"termid":"GO:0035840","terms_by_termid":{"GO:0035840":null,"GO:0035842":null}}


id: GO:0018726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + X-SO3(-) = HX + 9-phenanthrylsulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol sulfotransferase activity (obsolete GO:0018726)","synonyms":[{"name":"9-phenanthrol sulphotransferase activity","type":"exact"}],"termid":"GO:0018726"}


id: GO:0008537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multisubunit complex that activates the hydrolysis of small nonubiquitinated peptides by binding to the proteasome core complex.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome activator complex","synonyms":[{"name":"PA28","type":"narrow"}],"termid":"GO:0008537"}


id: GO:0004588
data:
  {"annotated_genes":["SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73717],"is_not":false,"summary":null,"term":"GO:0004588"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: orotidine 5'-phosphate + diphosphate = orotate + 5-phospho-alpha-D-ribose 1-diphosphate.","definition_xrefs":["EC:2.4.2.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"orotate phosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:OROPRIBTRANS-RXN","RHEA:10380","Reactome:R-HSA-73567"],"synonyms":[{"name":"OPRT activity","type":"related"},{"name":"OPRTase activity","type":"related"},{"name":"orotate phosphoribosyl pyrophosphate transferase activity","type":"related"},{"name":"orotic acid phosphoribosyltransferase activity","type":"related"},{"name":"orotidine 5'-monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine monophosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine phosphoribosyltransferase activity","type":"related"},{"name":"orotidine-5'-phosphate diphosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate pyrophosphorylase activity","type":"related"},{"name":"orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase activity","type":"related"},{"name":"orotidylate phosphoribosyltransferase activity","type":"related"},{"name":"orotidylate pyrophosphorylase activity","type":"related"},{"name":"orotidylic acid phosphorylase activity","type":"related"},{"name":"orotidylic acid pyrophosphorylase activity","type":"related"},{"name":"orotidylic phosphorylase activity","type":"related"},{"name":"orotidylic pyrophosphorylase activity","type":"related"}],"termid":"GO:0004588","terms_by_termid":{"GO:0004588":null}}


id: GO:1905143
data:
  {"annotated_genes":["SJAG_00353"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101423],"is_not":false,"summary":null,"term":"GO:1905143"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an eukaryotic translation initiation factor 2 complex.","definition_xrefs":["PMID:23775072","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00353":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"eIF-2 assembly","type":"exact"},{"name":"eIF-2 formation","type":"exact"},{"name":"eIF2 assembly","type":"exact"},{"name":"eIF2 formation","type":"exact"},{"name":"eukaryotic translation initiation factor 2 complex formation","type":"exact"}],"termid":"GO:1905143","terms_by_termid":{"GO:1905143":null}}


id: MONDO:0009262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM1 gangliosidosis type 3 is a mild, chronic, adult form of GM1 gangliosidosis characterized by onset generally during childhood or adolescence and by cerebellar dysfunction.","definition_xrefs":["Orphanet:79257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GM1 gangliosidosis","termid":"MONDO:0018149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"GM1 gangliosidosis type 3","secondary_identifiers":["GARD:2431","OMIM:230650","MEDGEN:78655","NANDO:2201198","DOID:0080489","icd11.foundation:1331496842","UMLS:C0268273","NANDO:1200069","SCTID:238027003"],"synonyms":[{"name":"Beta-galactosidase deficiency type 3","type":"related"},{"name":"GM1-gangliosidosis, type 3","type":"related"},{"name":"GM1-gangliosidosis, type III","type":"related"},{"name":"adult GM1 gangliosidosis","type":"related"},{"name":"adult-onset GM1 gangliosidosis","type":"exact"},{"name":"gangliosidosis GM1 type 3","type":"related"},{"name":"gangliosidosis generalised GM1 chronic type","type":"related"},{"name":"gangliosidosis generalized GM1 chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, adult type","type":"related"},{"name":"gangliosidosis, generalised GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalised GM1, type 3","type":"related"},{"name":"gangliosidosis, generalized GM1, adult type","type":"related"},{"name":"gangliosidosis, generalized GM1, chronic type","type":"related"},{"name":"gangliosidosis, generalized GM1, type 3","type":"related"}],"termid":"MONDO:0009262","xrefs":{"Monarch":{"xref_id":"0009262"}}}


id: PBO:0075673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase small subunit A","termid":"PBO:0075673"}


id: GO:1900102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endoplasmic reticulum unfolded protein response.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"is_a","term_name":"negative regulation of response to endoplasmic reticulum stress","termid":"GO:1903573"},{"relation_name":"negatively_regulates","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endoplasmic reticulum unfolded protein response","synonyms":[{"name":"down regulation of ER unfolded protein response","type":"exact"},{"name":"down regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"down regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"down regulation of erUPR","type":"exact"},{"name":"down-regulation of ER unfolded protein response","type":"exact"},{"name":"down-regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"down-regulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"down-regulation of erUPR","type":"exact"},{"name":"downregulation of ER unfolded protein response","type":"exact"},{"name":"downregulation of SREBP-mediated signalling pathway","type":"related"},{"name":"downregulation of endoplasmic reticulum unfolded protein response","type":"exact"},{"name":"downregulation of erUPR","type":"exact"},{"name":"inhibition of ER unfolded protein response","type":"exact"},{"name":"inhibition of SREBP-mediated signalling pathway","type":"related"},{"name":"inhibition of endoplasmic reticulum unfolded protein response","type":"narrow"},{"name":"inhibition of erUPR","type":"exact"},{"name":"negative regulation of ER unfolded protein response","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway","type":"related"},{"name":"negative regulation of erUPR","type":"exact"}],"termid":"GO:1900102"}


id: MONDO:0017993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare but serious cerebrovascular disorder involving thrombosis of the cerebral venous system. It affects children from the newborn period through childhood and adolescence. In childhood CSVT, acute infections of the head and neck such as mastoiditis are most common, followed by chronic underlying diseases such as nephrotic syndrome, cancer, and inflammatory bowel disease. Signs and symptoms are also age related. Seizures and altered mental status are the commonest manifestations in newborns. Headache, vomiting, and lethargy, sometimes with 6th nerve palsy, are the most common symptoms in children and adolescents.","definition_xrefs":["PMID:28798906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral sinovenous thrombosis","secondary_identifiers":["GARD:21485","Orphanet:329217"],"synonyms":[{"name":"CSVT","type":"exact"}],"termid":"MONDO:0017993","xrefs":{"Monarch":{"xref_id":"0017993"}}}


id: MONDO:0030482
data:
  {"annotated_genes":["SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86394],"is_not":false,"summary":null,"term":"MONDO:0030482"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"PI4KA-related disorder","termid":"MONDO:1040012"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 84, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794235","DOID:0112347","OMIM:619621","Orphanet:631079","UMLS:C5562025"],"synonyms":[{"name":"SPG84","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 84","type":"exact"}],"termid":"MONDO:0030482","terms_by_termid":{"MONDO:0030482":null},"xrefs":{"Monarch":{"xref_id":"0030482"}}}


id: MONDO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathologic accumulation of air in the interstitium of the lungs, which is caused by the rupture of alveoli and terminal bronchioles, and is most often seen in premature infants that need mechanical ventilation for respiratory distress syndrome.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial emphysema","secondary_identifiers":["NCIT:C34571","SCTID:77690003","ICD9:518.1","icd11.foundation:2008095771","DOID:10030","ICD10CM:J98.2","MEDGEN:234586","UMLS:C1370824"],"synonyms":[{"name":"PIE","type":"exact"},{"name":"interstitial emphysema of lung","type":"exact"},{"name":"pie","type":"exact"},{"name":"pulmonary interstitial emphysema","type":"exact"}],"termid":"MONDO:0000923","xrefs":{"Monarch":{"xref_id":"0000923"}}}


id: PBO:0043762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX11","termid":"PBO:0043762"}


id: PR:O14132
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pit1 gene.","definition_xrefs":["UniProtKB:O14132","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation protein kinase pit1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.06c","synonyms":[{"name":"Spom972h-pit1","type":"exact"}],"termid":"PR:O14132"}


id: GO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sucrose","termid":"GO:0009744"},{"relation_name":"is_a","term_name":"cellular response to disaccharide stimulus","termid":"GO:0071324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sucrose stimulus","termid":"GO:0071329"}


id: GO:0035391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of chromatin in a transcriptionally silent state such as heterochromatin at silent mating-type loci.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of chromatin silencing at silent mating-type cassette (obsolete GO:0035391)","termid":"GO:0035391"}


id: GO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-glycine acid amide by hydrolysis and oxidation of an interior Gly-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0088"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-glycine amidation (obsolete GO:0018041)","termid":"GO:0018041"}


id: FYPO:0000030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome congression is abnormal during mitosis. Chromosome congression is the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.","definition_xrefs":["PomBase:mah","GO:0051310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic chromosome congression","synonyms":[{"name":"abnormal chromosome congression at mitotic metaphase plate","type":"exact"},{"name":"abnormal chromosome congression during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome congression during vegetative growth","type":"exact"},{"name":"abnormal mitotic metaphase plate congression","type":"exact"},{"name":"chromosome segregation defects, chromosome congression","type":"exact"}],"termid":"FYPO:0000030"}


id: MONDO:0033361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 52","secondary_identifiers":["DOID:0080455","UMLS:C4479236","OMIM:617350","GARD:16223","MEDGEN:1376462"],"synonyms":[{"name":"DEE52","type":"exact"},{"name":"EIEE52","type":"exact"},{"name":"developmental and epileptic encephalopathy 52","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 52","type":"exact"}],"termid":"MONDO:0033361","xrefs":{"Monarch":{"xref_id":"0033361"}}}


id: GO:0034098
data:
  {"annotated_genes":["SJAG_03345","SJAG_04384"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70992,75850],"is_not":false,"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex required for the efficient dislocation of ER-lumenal degradation substrates, and their subsequent proteolysis by the proteasome. In budding yeast, this complex includes Cdc48p, Npl4p and Ufd1p proteins. In mammals, this complex includes a hexamer of VCP/p97 (a cytosolic ATPase) and trimers of each of its cofactors UFD1L and NPL4 (NPLOC4) (e.g. a 6:3:3 stoichiometry).","definition_xrefs":["PMID:11813000","PMID:16179952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575","GO:0005789","GO:0032991"],"is_obsolete":false,"name":"VCP-NPL4-UFD1 AAA ATPase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex","type":"narrow"},{"name":"p97-Ufd1-Npl4 complex","type":"exact"}],"termid":"GO:0034098","terms_by_termid":{"GO:0034098":null}}


id: GO:0090558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the plant epidermis over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant epidermis development","termid":"GO:0090558"}


id: PBO:0090812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome regulator, C-terminal","termid":"PBO:0090812"}


id: MONDO:0020769
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Menke-Hennekam syndrome","termid":"MONDO:0020774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menke-Hennekam syndrome 2","secondary_identifiers":["OMIM:618333","UMLS:C5193035","MEDGEN:1676668"],"synonyms":[{"name":"MKHK2","type":"related"},{"name":"Menke-Hennekam syndrome 2","type":"exact"}],"termid":"MONDO:0020769","xrefs":{"Monarch":{"xref_id":"0020769"}}}


id: PBO:0046429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B4","termid":"PBO:0046429"}


id: PBO:0090552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp5","termid":"PBO:0090552"}


id: GO:0071715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of icosanoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Icosanoids are unsaturated C20 fatty acids and skeletally related compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"icosanoid transport","synonyms":[{"name":"eicosanoid transport","type":"exact"}],"termid":"GO:0071715"}


id: GO:1905211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast chemotaxis.","definition_xrefs":["GOC:TermGenie","PMID:8760137","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of fibroblast chemotaxis","termid":"GO:1905210"},{"relation_name":"negatively_regulates","term_name":"fibroblast chemotaxis","termid":"GO:1990956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast chemotaxis","synonyms":[{"name":"down regulation of fibroblast chemotaxis","type":"exact"},{"name":"down-regulation of fibroblast chemotaxis","type":"exact"},{"name":"downregulation of fibroblast chemotaxis","type":"exact"},{"name":"inhibition of fibroblast chemotaxis","type":"narrow"}],"termid":"GO:1905211"}


id: GO:0033837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + an anthocyanin = UDP + an anthocyanin 3'-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"anthocyanin 3'-O-beta-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8231","RHEA:35627"],"synonyms":[{"name":"3'GT","type":"related"},{"name":"UDP-glucose:anthocyanin 3'-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:anthocyanin 3'-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0033837"}


id: PR:Q9HDW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDW6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.05","synonyms":[{"name":"Spom972h-vma5","type":"exact"},{"name":"V-ATPase subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW6"}


id: GO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the activity of a calcium channel in another organism via the action of a venom.","definition_xrefs":["PMID:20920515","GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of ion channel activity","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of calcium channel activity","synonyms":[{"name":"envenomation resulting in modulation of calcium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044472"}


id: GO:0050729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the inflammatory response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"positively_regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inflammatory response","synonyms":[{"name":"activation of inflammatory response","type":"narrow"},{"name":"stimulation of inflammatory response","type":"narrow"},{"name":"up regulation of inflammatory response","type":"exact"},{"name":"up-regulation of inflammatory response","type":"exact"},{"name":"upregulation of inflammatory response","type":"exact"}],"termid":"GO:0050729"}


id: MONDO:0025087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, highly contagious disease affecting swine of all ages and caused by the classical swine fever virus. It has a sudden onset with high morbidity and mortality.","definition_xrefs":["MESH:D006691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classical swine fever","synonyms":[{"name":"Hog cholera","type":"related"},{"name":"cholera, Hog","type":"related"},{"name":"swine fever","type":"related"},{"name":"swine fever, classical","type":"related"}],"termid":"MONDO:0025087","xrefs":{"Monarch":{"xref_id":"0025087"}}}


id: MONDO:0020404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital cardiovascular abnormality characterized by the presence of subvalvar left ventricular outflow tract obstruction, coarctation of the aorta, and mitral stenosis.","definition_xrefs":["NCIT:C99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shone complex","secondary_identifiers":["MEDGEN:501135","ICD9:746.84","UMLS:C1868705","MedDRA:10066802","Orphanet:99063","GARD:19630","SCTID:41371000119100"],"synonyms":[{"name":"shone syndrome","type":"exact"},{"name":"shone's syndrome (greater than 3 sites)","type":"exact"}],"termid":"MONDO:0020404","xrefs":{"Monarch":{"xref_id":"0020404"}}}


id: PBO:0055428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2858","termid":"PBO:0055428"}


id: GO:0006792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfur utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"sulfur utilization","termid":"GO:0006791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sulfur utilization","synonyms":[{"name":"regulation of sulphur utilization","type":"exact"}],"termid":"GO:0006792"}


id: GO:0004029
data:
  {"annotated_genes":["SJAG_03786","SJAG_02961","SJAG_00482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76434,78956],"is_not":false,"summary":null,"term":"GO:0004029"},{"annotations":[101188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140087"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + NAD+ = a carboxylate + 2 H+ + NADH.","definition_xrefs":["RHEA:16185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-389609","Reactome:R-HSA-5692261","Reactome:R-HSA-380608","UM-BBD_reactionID:r0605","EC:1.2.1.3","Reactome:R-HSA-6808496","UM-BBD_reactionID:r0023","Reactome:R-HSA-71723","Reactome:R-HSA-6813749","Reactome:R-HSA-6808487","Reactome:R-HSA-5696091","UM-BBD_reactionID:r0003","MetaCyc:ALDHDEHYDROG-RXN","Reactome:R-HSA-71691","Wikipedia:Aldehyde_dehydrogenase_(NAD+)"],"synonyms":[{"name":"CoA-independent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent 4-hydroxynonenal dehydrogenase activity","type":"related"},{"name":"NAD-dependent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked aldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (NAD+)","type":"related"},{"name":"aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"m-methylbenzaldehyde dehydrogenase activity","type":"related"},{"name":"propionaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004029","terms_by_termid":{"GO:0004029":null,"GO:0140087":null}}


id: MOD:01024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several monohydroxylated proline residues, including 3-hydroxy-L-proline and 4-hydroxy-L-proline.","definition_xrefs":["Unimod:35#P","DeltaMass:0","OMSSA:62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated proline","synonyms":[{"name":"Hy1Pro","type":"exact"},{"name":"Hydroxyproline","type":"exact"},{"name":"Hyp","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"hydroxylationp","type":"exact"}],"termid":"MOD:01024"}


