# terms

id: MONDO:0018100
data:
  {"annotated_genes":["SJAG_03371"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"}]},"cv_name":"mondo","definition":"A hereditary disorder that leads to a selective defect in renal or intestinal magnesium absorption, resulting in a low serum magnesium concentration.","definition_xrefs":["NCIT:C123263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"is_a","term_name":"disorder of magnesium transport","termid":"MONDO:0017765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03371":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"familial primary hypomagnesemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:34526","DOID:0060879","SCTID:80710001","OMIMPS:602014","UMLS:C0151723","MEDGEN:57481"],"synonyms":[{"name":"HOMG","type":"exact"},{"name":"familial primary hypomagnesemia","type":"exact"},{"name":"hypomagnesemia","type":"broad"},{"name":"primary familial hypomagnesemia","type":"exact"}],"termid":"MONDO:0018100","terms_by_termid":{"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0018100"}}}


id: MONDO:1010334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinitis pigmentosa that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa, non-human animal","secondary_identifiers":["OMIA:001413"],"termid":"MONDO:1010334","xrefs":{"Monarch":{"xref_id":"1010334"}}}


id: PBO:0034126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_start_location","termid":"PBO:0034126"}


id: PBO:0089956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0089956"}


id: MONDO:0018229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stevens-Johnson syndrome is a limited form of toxic epidermal necrolysis characterized by destruction and detachment of the skin epithelium and mucous membranes involving less than 10% of the body surface area.","definition_xrefs":["Orphanet:36426"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic epidermal necrolysis","termid":"MONDO:0019810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stevens-Johnson syndrome","secondary_identifiers":["GARD:7700","EFO:0004276","NANDO:2100290","ICD10CM:L51.1","MEDGEN:20955","ICD9:695.12","ICD9:695.15","NANDO:1200245","NANDO:2201006","MESH:D013262","DOID:0050426","NCIT:C79484","SCTID:73442001","MedDRA:10042033","OMIM:608579","UMLS:C0038325","icd11.foundation:450167795","ICD9:695.13"],"synonyms":[{"name":"Dermatostomatitis, Stevens Johnson type","type":"exact"},{"name":"Stevens Johnson syndrome","type":"exact"},{"name":"Stevens-Johnson syndrome, susceptibility to","type":"related"},{"name":"erythema multiforme major","type":"related"},{"name":"hypersensitivity syndrome, carbamazepine-induced, susceptibility to","type":"related"},{"name":"severe cutaneous adverse reaction, susceptibility to","type":"related"},{"name":"toxic Epidermal necrolysis, susceptibility to","type":"related"}],"termid":"MONDO:0018229","xrefs":{"Monarch":{"xref_id":"0018229"}}}


id: PR:O13629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lipoyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12561:SF0","PRO:DNx","OMA:SCHPO02855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoate-protein ligase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.09c","secondary_identifiers":["UniProtKB:O13629"],"synonyms":[{"name":"Spom972h-LIPT1","type":"exact"}],"termid":"PR:O13629"}


id: PBO:0057999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3923","termid":"PBO:0057999"}


id: GO:0019527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"},{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pentitol catabolic process","synonyms":[{"name":"pentitol breakdown","type":"exact"},{"name":"pentitol catabolism","type":"exact"},{"name":"pentitol degradation","type":"exact"}],"termid":"GO:0019527"}


id: FYPO:0006400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the frequency of DNA replication initiation is higher than normal at inefficient origins, i.e. replication origins that normally rarely fire.","definition_xrefs":["PMID:28903048","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased mitotic DNA replication initiation from inefficient origin","synonyms":[{"name":"increased DNA replication initiation from inefficient origin during mitotic cell cycle","type":"exact"},{"name":"increased DNA replication initiation from inefficient origin during vegetative growth","type":"exact"},{"name":"increased firing of inefficient replication origins","type":"exact"},{"name":"increased mitotic DNA replication initiation at inefficient origin","type":"exact"},{"name":"increased mitotic DNA replication initiation from inefficient replication origin","type":"related"}],"termid":"FYPO:0006400"}


id: MONDO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Thelazia.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thelaziasis","secondary_identifiers":["icd11.foundation:1803398353","ICD9:128.8","SCTID:46477004","UMLS:C0344058","MEDGEN:576041","DOID:0050261"],"synonyms":[{"name":"Thelazia caused disease or disorder","type":"exact"},{"name":"Thelazia disease or disorder","type":"exact"},{"name":"Thelazia infectious disease","type":"exact"},{"name":"conjunctival spirurosis","type":"related"},{"name":"infection by Thelazia","type":"exact"},{"name":"infection caused by Thelazia","type":"related"},{"name":"thelaziasis","type":"exact"},{"name":"thelaziosis","type":"related"},{"name":"verminous ophthalmia","type":"related"}],"termid":"MONDO:0000299","xrefs":{"Monarch":{"xref_id":"0000299"}}}


id: PBO:0004331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verprolin","termid":"PBO:0004331"}


id: MONDO:0018466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary late onset Parkinson disease (obsolete MONDO:0018466)","termid":"MONDO:0018466","xrefs":{"Monarch":{"xref_id":"0018466"}}}


id: GO:1900425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defense response to bacterium.","definition_xrefs":["PMID:22346749","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to bacterium","termid":"GO:1900424"},{"relation_name":"negatively_regulates","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to bacterium","secondary_identifiers":["GO:1902478"],"synonyms":[{"name":"down regulation of antibacterial peptide activity","type":"related"},{"name":"down regulation of defence response to bacteria","type":"exact"},{"name":"down regulation of defence response to bacterium","type":"exact"},{"name":"down regulation of defense response to bacteria","type":"exact"},{"name":"down regulation of defense response to bacterium","type":"exact"},{"name":"down-regulation of antibacterial peptide activity","type":"related"},{"name":"down-regulation of defence response to bacteria","type":"exact"},{"name":"down-regulation of defence response to bacterium","type":"exact"},{"name":"down-regulation of defense response to bacteria","type":"exact"},{"name":"down-regulation of defense response to bacterium","type":"exact"},{"name":"downregulation of antibacterial peptide activity","type":"related"},{"name":"downregulation of defence response to bacteria","type":"exact"},{"name":"downregulation of defence response to bacterium","type":"exact"},{"name":"downregulation of defense response to bacteria","type":"exact"},{"name":"downregulation of defense response to bacterium","type":"exact"},{"name":"inhibition of antibacterial peptide activity","type":"related"},{"name":"inhibition of defence response to bacteria","type":"exact"},{"name":"inhibition of defence response to bacterium","type":"exact"},{"name":"inhibition of defence response to pathogenic bacteria, incompatible interaction","type":"narrow"},{"name":"inhibition of defence response to pathogenic bacterium, incompatible interaction","type":"narrow"},{"name":"inhibition of defense response to bacteria","type":"exact"},{"name":"inhibition of defense response to bacterium","type":"narrow"},{"name":"inhibition of defense response to bacterium, incompatible interaction","type":"narrow"},{"name":"inhibition of resistance response to pathogenic bacteria","type":"narrow"},{"name":"inhibition of resistance response to pathogenic bacterium","type":"narrow"},{"name":"inhibition of response to pathogenic bacteria (incompatible interaction)","type":"narrow"},{"name":"inhibition of response to pathogenic bacterium (incompatible interaction)","type":"narrow"},{"name":"negative regulation of antibacterial peptide activity","type":"related"},{"name":"negative regulation of defence response to bacteria","type":"exact"},{"name":"negative regulation of defence response to bacterium","type":"exact"},{"name":"negative regulation of defense response to bacteria","type":"exact"},{"name":"negative regulation of defense response to bacterium, incompatible interaction","type":"narrow"}],"termid":"GO:1900425"}


id: MONDO:0017854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete T-b+ severe combined immunodeficiency (obsolete MONDO:0017854)","termid":"MONDO:0017854","xrefs":{"Monarch":{"xref_id":"0017854"}}}


id: GO:0140070
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of hydrogen peroxide through a transmembrane aqueous pore or channel.","definition_xrefs":["PMID:27256569","PMID:23541115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel activity","termid":"GO:0015267"},{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"hydrogen peroxide channel activity","synonyms":[{"name":"hydrogen peroxide transmembrane transporter activity","type":"related"}],"termid":"GO:0140070"}


id: PBO:0083189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YJL225C","termid":"PBO:0083189"}


id: GO:0043757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + adenosylcobyric acid + (R)-1-aminopropan-2-yl phosphate = ADP + phosphate + adenosylcobinamide phosphate, and ATP + adenosylcobyric acid + (R)-1-aminopropan-2-ol = ADP + phosphate + adenosylcobinamide.","definition_xrefs":["EC:6.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"adenosylcobinamide-phosphate synthase activity","secondary_identifiers":["MetaCyc:RXN-6261","RHEA:21896"],"synonyms":[{"name":"AdoCbi-P synthase activity","type":"related"},{"name":"CbiB","type":"related"},{"name":"adenosylcobyric acid:(R)-1-aminopropan-2-yl phosphate ligase (ADP-forming)","type":"exact"}],"termid":"GO:0043757"}


id: MOD:00385
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-asparagine residue and a glycine residue to form L-asparagine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0380","PubMed:10504696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparagine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,3-diamino-3-oxopropyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,3-diamino-3-oxopropyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Asn-Gly)","type":"exact"},{"name":"L-asparagine 5-imidazolinone glycine","type":"exact"},{"name":"Zoanthus sp. fluorescent protein FP506 chromophore","type":"exact"},{"name":"[2-(1,3-diamino-3-oxopropyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"asparaginyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00385"}


id: GO:0043495
data:
  {"annotated_genes":["SJAG_05950","SJAG_03264","SJAG_04558","SJAG_03200","SJAG_01178","SJAG_04821","SJAG_02737","SJAG_01456","SJAG_02398","SJAG_03449","SJAG_01073","SJAG_04077","SJAG_04991","SJAG_00368","SJAG_04315","SJAG_01437","SJAG_03416","SJAG_03464","SJAG_04370","SJAG_00831","SJAG_01258","SJAG_04413","SJAG_00185","SJAG_03089","SJAG_01564","SJAG_01738","SJAG_03103","SJAG_00453","SJAG_03920","SJAG_00079","SJAG_01263","SJAG_00397","SJAG_03564","SJAG_01196","SJAG_00268","SJAG_00053","SJAG_03673","SJAG_03170","SJAG_01143","SJAG_01305","SJAG_04417","SJAG_01745","SJAG_02215","SJAG_05000","SJAG_03602","SJAG_05196","SJAG_02699","SJAG_03851","SJAG_03596","SJAG_00700","SJAG_00029","SJAG_03435","SJAG_00152","SJAG_03710","SJAG_04763","SJAG_02874","SJAG_04479","SJAG_04930","SJAG_05226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73192,73464,80673,94968,95763,95823,97789,98761,99008,99775,102109,102825,103812,104091,105458,106243,106448,107008,107213,109558,111176,113504,114351,115603,117057,118765,118979,119248],"is_not":false,"summary":null,"term":"GO:0043495"},{"annotations":[91688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140449"},{"annotations":[112178,112614,114253,103282,117246,117334,106524,106912,92933,103058,99652,102740,113076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106006"},{"annotations":[99727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[104697,90754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160214"},{"annotations":[91692,103919,119892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062239"},{"annotations":[60751,114839,90312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"},{"annotations":[107964,107838,91245,106174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140474"},{"annotations":[106913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140443"},{"annotations":[80688,103137,113149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106166"},{"annotations":[106283,117860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140473"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a protein or a protein complex with a membrane, or bringing together two membranes, either via membrane lipid binding or by interacting with a membrane protein, to establish or maintain the localization of the protein, protein complex or organelle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00079":null,"SJAG_00152":null,"SJAG_00185":null,"SJAG_00268":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00453":null,"SJAG_00700":null,"SJAG_00831":null,"SJAG_01073":null,"SJAG_01143":null,"SJAG_01178":null,"SJAG_01196":null,"SJAG_01258":null,"SJAG_01263":null,"SJAG_01305":null,"SJAG_01437":null,"SJAG_01456":null,"SJAG_01564":null,"SJAG_01738":null,"SJAG_01745":null,"SJAG_02215":null,"SJAG_02398":null,"SJAG_02699":null,"SJAG_02737":null,"SJAG_02874":null,"SJAG_03089":null,"SJAG_03103":null,"SJAG_03170":null,"SJAG_03200":null,"SJAG_03264":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03449":null,"SJAG_03464":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03673":null,"SJAG_03710":null,"SJAG_03851":null,"SJAG_03920":null,"SJAG_04077":null,"SJAG_04315":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04479":null,"SJAG_04558":null,"SJAG_04763":null,"SJAG_04821":null,"SJAG_04930":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"protein-membrane adaptor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:24184107":null},"synonyms":[{"name":"anchoring","type":"related"},{"name":"membrane-membrane adaptor activity","type":"narrow"},{"name":"protein membrane adaptor","type":"exact"},{"name":"protein membrane adaptor activity","type":"exact"},{"name":"protein membrane anchor","type":"related"}],"termid":"GO:0043495","terms_by_termid":{"GO:0043495":null,"GO:0062239":null,"GO:0106006":null,"GO:0106166":null,"GO:0140443":null,"GO:0140449":null,"GO:0140473":null,"GO:0140474":null,"GO:0140506":null,"GO:0140580":null,"GO:0160214":null}}


id: PBO:0116670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 1 pseudogene 1","termid":"PBO:0116670"}


id: GO:0047632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + H2O = N-carbamoylputrescine + NH3.","definition_xrefs":["MetaCyc:AGMATINE-DEIMINASE-RXN","EC:3.5.3.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"agmatine deiminase activity","secondary_identifiers":["RHEA:18037"],"synonyms":[{"name":"agmatine amidinohydrolase","type":"broad"},{"name":"agmatine iminohydrolase activity","type":"related"}],"termid":"GO:0047632"}


id: GO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dGTP + H2O = dGMP + H+ + diphosphate.","definition_xrefs":["PMID:22531138","PMID:17090528","GOC:dgf","RHEA:28362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0047429","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dGTP diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R01855"],"synonyms":[{"name":"2'-deoxyguanosine 5'-triphosphate diphosphohydrolase","type":"exact"},{"name":"dGTP pyrophosphatase activity","type":"exact"}],"termid":"GO:0036217"}


id: RO:HOM0000047
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves the chromosomes able to pair (synapse) during meiosis.","definition_xrefs":["ISBN:0195307615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_chromosomal_homology_relationship_with","synonyms":[{"name":"chromosomal homologous to","type":"exact"}],"termid":"RO:HOM0000047"}


id: PBO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergently orientated to functionally related gene","termid":"PBO:0000630"}


id: MONDO:0003125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant tumor that arises from the testis. It is composed of granulosa cells, Leydig cells, Sertoli cells, and fibroblasts. Each of these cell types may constitute the only cellular component that is present in the tumor or it may be mixed with other cell types in various combinations. The prognosis can not always be predicted on histologic grounds alone. Approximately, ten percent of these tumors may metastasize. Representative examples include granulosa cell tumor, Leydig cell tumor, Sertoli cell tumor, and tumors of the thecoma-fibroma group.","definition_xrefs":["NCIT:C6358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular sex cord-stromal neoplasm","secondary_identifiers":["Orphanet:363489","DOID:4757","SCTID:702406000","GARD:21551","UMLS:C3840076","MEDGEN:825921"],"synonyms":[{"name":"sex cord-stromal neoplasm","type":"related"},{"name":"sex cord-stromal neoplasm of testis","type":"related"},{"name":"sex cord-stromal neoplasm of the testis","type":"related"},{"name":"sex cord-stromal tumor of testis","type":"exact"},{"name":"sex cord-stromal tumor of the testis","type":"related"},{"name":"sex cord-stromal tumour of testis","type":"exact"},{"name":"sex cord-stromal tumour of the testis","type":"related"},{"name":"testicular sex cord-stromal neoplasm","type":"exact"},{"name":"testicular sex cord-stromal tumor","type":"exact"},{"name":"testicular sex cord-stromal tumour","type":"exact"},{"name":"testis sex cord-stromal tumor","type":"exact"},{"name":"testis sex cord-stromal tumour","type":"exact"}],"termid":"MONDO:0003125","xrefs":{"Monarch":{"xref_id":"0003125"}}}


id: FYPO:0001839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at the same frequency as in wild-type cells. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal minichromosome loss","termid":"FYPO:0001839"}


id: MONDO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhoid","termid":"MONDO:0004872"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perianal hematoma","secondary_identifiers":["SCTID:26373009","UMLS:C0155784","DOID:9745","ICD9:455.4","MEDGEN:510079"],"synonyms":[{"name":"Thrombosed external haemorrhoids","type":"exact"},{"name":"Thrombosed external hemorrhoids","type":"exact"},{"name":"external thrombosed haemorrhoids","type":"exact"},{"name":"external thrombosed hemorrhoids","type":"exact"}],"termid":"MONDO:0004871","xrefs":{"Monarch":{"xref_id":"0004871"}}}


id: GO:0021600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the abducens nerve. This process pertains to the physical shaping of a rudimentary structure. The motor function of the abducens nerve is to contract the lateral rectus which results in abduction of the eye.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"abducens nerve morphogenesis","termid":"GO:0021598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"abducens nerve structural organization","synonyms":[{"name":"CN VI structural organization","type":"related"},{"name":"abducens nerve structural organisation","type":"exact"}],"termid":"GO:0021600"}


id: PBO:0012037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity (predicted)","termid":"PBO:0012037"}


id: MONDO:0010190
data:
  {"annotated_genes":["SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86956],"is_not":false,"summary":null,"term":"MONDO:0010190"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1848526","GARD:15244","DOID:0060267","MEDGEN:376379","MESH:C564738","OMIM:277470"],"synonyms":[{"name":"PCH2A","type":"related"},{"name":"Pch2","type":"related"},{"name":"TSEN54 pontocerebellar hypoplasia type 2","type":"exact"},{"name":"Volendam neurodegenerative disease","type":"related"},{"name":"microcephaly pontocerebellar hypoplasia dyskinesia","type":"related"},{"name":"pontocerebellar hypoplasia type 2 caused by mutation in TSEN54","type":"exact"},{"name":"pontocerebellar hypoplasia with progressive cerebral atrophy","type":"related"},{"name":"pontocerebellar hypoplasia, type 2A","type":"related"}],"termid":"MONDO:0010190","terms_by_termid":{"MONDO:0010190":null},"xrefs":{"Monarch":{"xref_id":"0010190"}}}


id: GO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: JNKK + ATP = JNKK phosphate + ADP. This reaction is the phosphorylation and activation of JUN kinase kinases (JNKKs).","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAP kinase kinase kinase activity","termid":"GO:0004709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0004672","GO:0003824","GO:0140096","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"JUN kinase kinase kinase activity","synonyms":[{"name":"JNK kinase kinase activity","type":"related"},{"name":"JNKKK","type":"exact"}],"termid":"GO:0004706"}


id: PBO:0039012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 like ATPase","termid":"PBO:0039012"}


id: FYPO:0008057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed  ability of an enzyme to catalyze consecutive reactions without releasing the substrate (i.e. template) is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal enzyme processivity","termid":"FYPO:0008057"}


id: GO:0036461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BLOC-2 complex, a protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22511774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BLOC-2 complex binding","termid":"GO:0036461"}


id: PBO:0081573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 500","termid":"PBO:0081573"}


id: PBO:0063665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins 2","termid":"PBO:0063665"}


id: PBO:0083267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the uncharacterized gene CUE5; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083267"}


id: PBO:0026691
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tamoxifen","termid":"PBO:0026691"}


id: PBO:0042992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 5","termid":"PBO:0042992"}


id: GO:1902063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of betaine aldehyde.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23563483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"betaine aldehyde metabolic process","termid":"GO:1902061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde biosynthetic process","synonyms":[{"name":"betaine aldehyde anabolism","type":"exact"},{"name":"betaine aldehyde biosynthesis","type":"exact"},{"name":"betaine aldehyde formation","type":"exact"},{"name":"betaine aldehyde synthesis","type":"exact"}],"termid":"GO:1902063"}


id: MONDO:0859311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, demyelinating, type 1J","secondary_identifiers":["OMIM:620111","UMLS:C5774249","MEDGEN:1824022"],"termid":"MONDO:0859311","xrefs":{"Monarch":{"xref_id":"0859311"}}}


id: GO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of a cocaine stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to cocaine","termid":"GO:0042220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to cocaine","synonyms":[{"name":"behavioural response to cocaine","type":"exact"}],"termid":"GO:0048148"}


id: MONDO:0008607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Triphalangeal thumbs-brachyectrodactyly syndrome is characterized by triphalangeal thumbs and brachydactyly of the hands. It has been described in four families and in one isolated case. Ectrodactyly of the feet and, more rarely, ectrodactyly of the hands were also reported in some family members. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:2947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triphalangeal thumbs-brachyectrodactyly syndrome","secondary_identifiers":["GARD:5290","MESH:C536564","OMIM:190680","MEDGEN:348710","UMLS:C1860804"],"synonyms":[{"name":"Carnevale-Hernández-del Castillo syndrome","type":"exact"},{"name":"triphalangeal thumb and brachy-ectrodactyly syndrome","type":"related"},{"name":"triphalangeal thumb and brachyectrodactyly syndrome","type":"related"},{"name":"triphalangeal thumbs brachyectrodactyly","type":"related"},{"name":"triphalangeal thumbs with brachyectrodactyly","type":"related"}],"termid":"MONDO:0008607","xrefs":{"Monarch":{"xref_id":"0008607"}}}


id: MONDO:1010940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant histiocytosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant histiocytosis, non-human animal","termid":"MONDO:1010210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant histiocytosis, domestic cat","secondary_identifiers":["OMIA:000620-9685"],"termid":"MONDO:1010940","xrefs":{"Monarch":{"xref_id":"1010940"}}}


id: GO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxyimino)propanoate + acetone = acetone oxime + pyruvate.","definition_xrefs":["RHEA:11624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"oximinotransferase activity","secondary_identifiers":["MetaCyc:OXIMINOTRANSFERASE-RXN","KEGG_REACTION:R03796","EC:2.6.3.1","GO:0016770"],"synonyms":[{"name":"oximase activity","type":"related"},{"name":"oximinotransaminase activity","type":"related"},{"name":"pyruvate-acetone oximinotransferase activity","type":"related"},{"name":"transoximase activity","type":"related"},{"name":"transoximinase activity","type":"related"}],"termid":"GO:0050206"}


id: GO:1901273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-dehydro-3-deoxy-D-gluconic acid.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00856","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"2-dehydro-3-deoxy-D-gluconic acid metabolic process","termid":"GO:1901272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-D-gluconic acid catabolic process","synonyms":[{"name":"2-dehydro-3-deoxy-D-gluconic acid breakdown","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid catabolism","type":"exact"},{"name":"2-dehydro-3-deoxy-D-gluconic acid degradation","type":"exact"}],"termid":"GO:1901273"}


id: PBO:0049568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 5","termid":"PBO:0049568"}


id: MONDO:0859085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked","secondary_identifiers":["UMLS:C5774179","OMIM:301094","MEDGEN:1823953"],"termid":"MONDO:0859085","xrefs":{"Monarch":{"xref_id":"0859085"}}}


id: FYPO:0005602
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA derived from subtelomeric heterochromatin forming regions is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:27183912","PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal subtelomeric heterochromatin RNA level","synonyms":[{"name":"normal subtelomere-derived RNA level","type":"exact"},{"name":"normal subtelomere-derived RNA level during vegetative growth","type":"exact"},{"name":"normal subtelomere-derived RNA transcript level","type":"exact"}],"termid":"FYPO:0005602"}


id: GO:0010497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells via plasmodesmata. Plasmodesmata is a fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.","definition_xrefs":["PMID:17601829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular transport","termid":"GO:0010496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"plasmodesmata-mediated intercellular transport","secondary_identifiers":["GO:1902587"],"synonyms":[{"name":"plasmodesma-mediated cell-to-cell transport","type":"exact"},{"name":"plasmodesma-mediated intercellular transport","type":"exact"},{"name":"plasmodesmata-mediated cell-to-cell transport","type":"exact"},{"name":"single organism plasmodesmata-mediated intercellular transport","type":"related"},{"name":"single-organism plasmodesmata-mediated intercellular transport","type":"related"}],"termid":"GO:0010497"}


id: MONDO:0007222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brachydactyly characterized by short and broad terminal phalanges of the thumbs and big toes that has material basis in mutation in the HOXD13 gene on chromosome 2q31.1.","definition_xrefs":["DOID:0110971","PMID:12649808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type D","secondary_identifiers":["Orphanet:93385","MEDGEN:66313","UMLS:C0220664","OMIM:113200","icd11.foundation:642882691","MESH:C562420"],"synonyms":[{"name":"BDD","type":"exact"},{"name":"brachydactyly, type D","type":"related"},{"name":"stub thumb","type":"related"}],"termid":"MONDO:0007222","xrefs":{"Monarch":{"xref_id":"0007222"}}}


id: MONDO:0014840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the TCF3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 8, autosomal dominant","secondary_identifiers":["DOID:0081140","GARD:16171","MEDGEN:934753","OMIM:616941","UMLS:C4310786"],"synonyms":[{"name":"AGM8","type":"exact"},{"name":"TCF3 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 8, autosomal dominant","type":"exact"},{"name":"agammaglobulinemia 8, autosomal dominant; AGM8","type":"exact"},{"name":"agammaglobulinemia, autosomal dominant, due to TCF3 defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in TCF3","type":"exact"}],"termid":"MONDO:0014840","xrefs":{"Monarch":{"xref_id":"0014840"}}}


id: PR:Q9Y801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug57 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein mug57 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.10","synonyms":[{"name":"Spom972h-mug57","type":"exact"},{"name":"meiotically up-regulated gene 57 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y801"}


id: GO:0031351
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid membrane (obsolete GO:0031351)","synonyms":[{"name":"integral to plastid membrane","type":"narrow"}],"termid":"GO:0031351"}


id: PBO:0068540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 143, pseudogene","termid":"PBO:0068540"}


id: PBO:0082278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anthranilate synthase; catalyzes the initial step of tryptophan biosynthesis, forms multifunctional hetero-oligomeric anthranilate synthase:indole-3-glycerol phosphate synthase enzyme complex with Trp3p","termid":"PBO:0082278"}


id: MONDO:0016685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"low grade astrocytic tumor","termid":"MONDO:0021638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low-grade astrocytoma","secondary_identifiers":["MedDRA:10065869","UMLS:C1314694","MEDGEN:727259","GARD:20706","Orphanet:251592"],"termid":"MONDO:0016685","xrefs":{"Monarch":{"xref_id":"0016685"}}}


id: FYPO:0007617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium azide (NaN3). Cells stop growing (and may die) at a concentration of sodium azide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to sodium azide","synonyms":[{"name":"sensitive to NaN3","type":"exact"},{"name":"sensitive to sodium azide during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium azide during vegetative growth","type":"exact"}],"termid":"FYPO:0007617"}


id: SO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydrophobic regions are regions with a low affinity for water.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"hydrophobic_region_of_peptide","synonyms":[{"name":"hydropathic","type":"related"},{"name":"hydrophobic region of peptide","type":"related"},{"name":"hydrophobic_region","type":"exact"},{"name":"hydrophobicity","type":"related"}],"termid":"SO:0100013"}


id: PBO:0070142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 56 pseudogene","termid":"PBO:0070142"}


id: GO:0010661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle cell apoptotic process","synonyms":[{"name":"positive regulation of muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010661"}


id: PBO:0091157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine/xanthine/hypoxanthine phosphoribosyltransferase Hpt1","termid":"PBO:0091157"}


id: PR:Q9Y7T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04477","PANTHER:PTHR11599:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.12c","secondary_identifiers":["UniProtKB:Q9Y7T8"],"synonyms":[{"name":"Spom972h-PSMB3","type":"exact"}],"termid":"PR:Q9Y7T8"}


id: PBO:0050408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 10","termid":"PBO:0050408"}


id: MONDO:0019989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pauci-immune glomerulonephritis (GN) without antineutrophilic cytoplasmic antibodies (ANCA) is a form of rapidly progressive glomerulonephritis comprising 10-43% of pauci-immune glomerulonephritis and characterized by the absence of ANCA. In comparison with pauci-immune GN with ANCA, patients lacking ANCA may be younger at onset of the disease and have a shorter interval from onset of the disease to diagnosis. They have fewer extra renal manifestations (e.g. involvement of lung, eye, ear, nose and throat), fewer constitutional symptoms (e.g. fever, weight loss, muscle pain and arthralgia) and a high prevalence of nephrotic syndrome and chronic renal lesions. Their prognosis is generally poorer.","definition_xrefs":["Orphanet:97564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pauci-immune glomerulonephritis","termid":"MONDO:0019641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pauci-immune glomerulonephritis without ANCA","secondary_identifiers":["UMLS:C5680253","GARD:19380","MEDGEN:1842476"],"synonyms":[{"name":"antineutrophil cytoplasmic antibody-negative pauci-immune glomerulonephritis","type":"exact"},{"name":"pauci-immune glomerulonephritis without antineutrophil cytoplasmic antibody","type":"exact"}],"termid":"MONDO:0019989","xrefs":{"Monarch":{"xref_id":"0019989"}}}


id: PBO:0072778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC1 like phosphatidylinositide phosphatase","termid":"PBO:0072778"}


id: PR:O13915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.10","synonyms":[{"name":"Spom972h-mpn1","type":"exact"}],"termid":"PR:O13915"}


id: PBO:0057793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-2","termid":"PBO:0057793"}


id: PBO:0067198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 262, pseudogene","termid":"PBO:0067198"}


id: PBO:0060415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA50 pseudogene 2","termid":"PBO:0060415"}


id: PBO:0000519
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.10.1","termid":"PBO:0000519"}


id: PR:O59792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin-independence factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.01","synonyms":[{"name":"Spom972h-cif1","type":"exact"}],"termid":"PR:O59792"}


id: PBO:0074830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 26","termid":"PBO:0074830"}


id: PBO:0116315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase beta subunit (central stalk) Atp2","termid":"PBO:0116315"}


id: PBO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, highly conserved across species; homolog of human CYB5R4; null mutant displays reduced frequency of mitochondrial genome loss; AIM33 has a paralog, PGA3, that arose from the whole genome duplication","termid":"PBO:0086038"}


id: FYPO:0009061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in mitotic interphase in which the localization of a protein to the cell cortex is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to cell cortex during vegetative growth","termid":"FYPO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to cell cortex during mitotic interphase","synonyms":[{"name":"increased protein localisation to cell cortex during mitotic interphase","type":"exact"}],"termid":"FYPO:0009061"}


id: FYPO:0006855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 37 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K37 methylation","synonyms":[{"name":"abnormal histone H3 K37 methylation","type":"exact"},{"name":"abnormal histone H3K37me","type":"exact"},{"name":"abnormal histone lysine H3 K37 methylation","type":"exact"}],"termid":"FYPO:0006855"}


id: PBO:0056704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3 pseudogene 2","termid":"PBO:0056704"}


id: GO:0004320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (9Z)-octadecenoyl-[ACP] + H2O = (9Z)-octadecenoate + H+ + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oleoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0004320)","synonyms":[{"name":"oleoyl-ACP hydrolase activity","type":"exact"},{"name":"oleoyl-ACP thioesterase activity","type":"related"},{"name":"oleoyl-[acyl-carrier protein] hydrolase activity","type":"exact"},{"name":"oleoyl-acyl carrier protein thioesterase activity","type":"related"},{"name":"oleoyl-acyl-carrier-protein hydrolase","type":"broad"}],"termid":"GO:0004320"}


id: MONDO:0014792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone Paget disease","termid":"MONDO:0005382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paget disease of bone 6","secondary_identifiers":["OMIM:616833","MEDGEN:908743","DOID:0081369","UMLS:C4085250"],"synonyms":[{"name":"PDB6","type":"exact"},{"name":"Paget disease of bone 6","type":"exact"},{"name":"Paget disease of bone 6; PDB6","type":"exact"},{"name":"Paget disease of bone type 6","type":"exact"}],"termid":"MONDO:0014792","xrefs":{"Monarch":{"xref_id":"0014792"}}}


id: GO:0036523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of cytokine production by the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:25063865"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host cytokine production (obsolete GO:0036523)","synonyms":[{"name":"'induction by symbiont of host cytokine secretion'","type":"narrow"},{"name":"induction by symbiont of host cytokine secretion","type":"related"},{"name":"positive regulation by symbiont of host cytokine secretion","type":"narrow"}],"termid":"GO:0036523"}


id: PBO:0039368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia chromosome region 2","termid":"PBO:0039368"}


id: MONDO:0020193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secretory apparatus of the lacrimal system anomaly (obsolete MONDO:0020193)","secondary_identifiers":["Orphanet:98603"],"synonyms":[{"name":"disease of lacrimal gland","type":"broad"},{"name":"disorder of lacrimal gland","type":"broad"},{"name":"lacrimal gland disease","type":"broad"}],"termid":"MONDO:0020193","xrefs":{"Monarch":{"xref_id":"0020193"}}}


id: MONDO:0021640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of malignant gliomas that includes anaplastic astrocytoma, anaplastic oligodendroglioma, anaplastic oligoastrocytoma, and anaplastic ependymoma.","definition_xrefs":["NCIT:C127816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"grade III glioma","secondary_identifiers":["MEDGEN:925529","UMLS:C4287997"],"synonyms":[{"name":"WHO grade III glioma","type":"exact"},{"name":"anaplastic glioma","type":"exact"}],"termid":"MONDO:0021640","xrefs":{"Monarch":{"xref_id":"0021640"}}}


id: MONDO:0014452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial dysfibrinogenemia is a coagulation disorder characterized by a bleeding tendency due to a functional anomaly of circulating fibrinogen.","definition_xrefs":["Orphanet:98881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrinogen deficiency","termid":"MONDO:0018060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial dysfibrinogenemia","secondary_identifiers":["ICD9:286.3","NCIT:C131659","MEDGEN:82901","SCTID:111589005","UMLS:C0272350","GARD:2004","OMIM:616004"],"synonyms":[{"name":"congenital dysfibrinogenemia","type":"related"},{"name":"dysfibrinogenemia","type":"exact"},{"name":"dysfibrinogenemia, congenital","type":"related"},{"name":"dysfibrinogenemia, familial","type":"related"},{"name":"familial dysfibrinogenemia","type":"exact"},{"name":"hypodysfibrinogenemia","type":"exact"},{"name":"hypodysfibrinogenemia, congenital","type":"related"}],"termid":"MONDO:0014452","xrefs":{"Monarch":{"xref_id":"0014452"}}}


id: PBO:0013778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Mdb1","termid":"PBO:0013778"}


id: PBO:0011466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase, tubulin-like (predicted)","termid":"PBO:0011466"}


id: PBO:0078165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta locus","termid":"PBO:0078165"}


id: GO:0141119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that maintains methylated cytosine in newly synthesized DNA following DNA replication. After the establishment of novel DNA methylation marks, the newly created patterns must be faithfully transmitted by maintenance DNA methyltransferases during cell division.","definition_xrefs":["PMID:20142834","PMID:11005794","PMID:34968368","PMID:26077819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"chromosomal DNA methylation maintenance following DNA replication","synonyms":[{"name":"DNA methylation","type":"broad"},{"name":"DNA methylation maintenance","type":"broad"},{"name":"DNA methylation maintenance following DNA replication","type":"exact"},{"name":"DNA methylation maintenance following cell division","type":"exact"},{"name":"genome methylation maintenance following DNA replication","type":"exact"}],"termid":"GO:0141119"}


id: PBO:0072818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 12","termid":"PBO:0072818"}


id: PBO:0029619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029619"}


id: PBO:0032756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Aim19","termid":"PBO:0032756"}


id: MONDO:0004992
data:
  {"annotated_genes":["SJAG_01419","SJAG_02187","SJAG_01671","SJAG_04502","SJAG_03689","SJAG_00440","SJAG_04699","SJAG_03453","SJAG_04394","SJAG_01410","SJAG_02226","SJAG_03720","SJAG_01620","SJAG_03905","SJAG_00997","SJAG_00229","SJAG_01111","SJAG_01144","SJAG_01349","SJAG_01013","SJAG_01748","SJAG_04287","SJAG_01082","SJAG_02748","SJAG_02261","SJAG_02460","SJAG_00260","SJAG_02426","SJAG_02527","SJAG_04885","SJAG_04213","SJAG_04755","SJAG_02231","SJAG_00490","SJAG_00757","SJAG_04114","SJAG_03677","SJAG_04206","SJAG_01895","SJAG_05979","SJAG_01151","SJAG_01970","SJAG_04067","SJAG_01837","SJAG_02049","SJAG_05313","SJAG_03787","SJAG_00079","SJAG_00980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87711,87558,87556,87557,87559,87712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[86653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[86517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[86837,86836,86835,86831,86832,86830,86833,86834,87682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[85398,87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87399,87398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[87670,87671,87669,86551,87672,86550,86548,86552,86549,87673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[86511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[87156,87157,87688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[86007,86006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"},{"annotations":[87130,87131,87129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[85986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[86231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"},{"annotations":[87678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"},{"annotations":[87664,87665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"},{"annotations":[85540,85539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87676,87677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[87290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"},{"annotations":[86208,87651,87650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"},{"annotations":[86640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A tumor composed of atypical neoplastic, often pleomorphic cells that invade other tissues. Malignant neoplasms often metastasize to distant anatomic sites and may recur after excision. The most common malignant neoplasms are carcinomas (adenocarcinomas or squamous cell carcinomas), Hodgkin and non-Hodgkin lymphomas, leukemias, melanomas, and sarcomas.","definition_xrefs":["NCIT:C9305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00229":null,"SJAG_00260":null,"SJAG_00440":null,"SJAG_00490":null,"SJAG_00757":null,"SJAG_00980":null,"SJAG_00997":null,"SJAG_01013":null,"SJAG_01082":null,"SJAG_01111":null,"SJAG_01144":null,"SJAG_01151":null,"SJAG_01349":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01671":null,"SJAG_01748":null,"SJAG_01837":null,"SJAG_01895":null,"SJAG_01970":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_03677":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_03787":null,"SJAG_03905":null,"SJAG_04067":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04287":null,"SJAG_04394":null,"SJAG_04502":null,"SJAG_04699":null,"SJAG_04755":null,"SJAG_04885":null,"SJAG_05313":null,"SJAG_05979":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"is_obsolete":false,"name":"cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:199.1","DOID:162","ICDO:8000/3","MEDGEN:14297","ICD9:199","NIFSTD:birnlex_406","SCTID:363346000","UMLS:C0006826","DOID:0050687","DOID:0050686","ICD9:195.8","ONCOTREE:MT"],"synonyms":[{"name":"CA","type":"exact"},{"name":"MT","type":"related"},{"name":"cancer","type":"exact"},{"name":"cell type cancer","type":"exact"},{"name":"malignancy","type":"exact"},{"name":"malignant growth","type":"exact"},{"name":"malignant neoplasm","type":"exact"},{"name":"malignant neoplasm (disease)","type":"exact"},{"name":"malignant neoplastic disease","type":"exact"},{"name":"malignant tumor","type":"exact"},{"name":"malignant tumour","type":"exact"},{"name":"neoplasm (disease), malignant","type":"exact"},{"name":"neoplasm, malignant","type":"exact"},{"name":"primary cancer","type":"exact"}],"termid":"MONDO:0004992","terms_by_termid":{"MONDO:0001056":null,"MONDO:0001187":null,"MONDO:0002629":null,"MONDO:0003789":null,"MONDO:0005575":null,"MONDO:0007256":null,"MONDO:0007273":null,"MONDO:0007356":null,"MONDO:0007763":null,"MONDO:0008018":null,"MONDO:0008566":null,"MONDO:0008903":null,"MONDO:0009693":null,"MONDO:0011014":null,"MONDO:0011121":null,"MONDO:0011655":null,"MONDO:0011962":null,"MONDO:0012004":null,"MONDO:0012249":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0013602":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0013872":null,"MONDO:0014937":null,"MONDO:0016419":null,"MONDO:0018874":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0004992"}}}


id: GO:0061424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter and activates or increases the frequency, rate or extent of peroxisome organization.","definition_xrefs":["PMID:7500953","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061424)","synonyms":[{"name":"positive regulation of peroxisome organisation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0061424"}


id: GO:0018192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of an enzyme active site via modification of peptidyl-cysteine to peptidyl-L-cysteine persulfide.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via cysteine modification to L-cysteine persulfide (obsolete GO:0018192)","synonyms":[{"name":"enzyme active site formation via L-cysteine persulphide","type":"exact"}],"termid":"GO:0018192"}


id: FYPO:0005970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing magnesium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on magnesium chloride","synonyms":[{"name":"normal cell population growth in presence of magnesium chloride","type":"exact"},{"name":"normal cell population growth on MgCl2","type":"exact"},{"name":"normal cell population growth on magnesium chloride","type":"exact"},{"name":"normal cellular response to magnesium chloride","type":"related"},{"name":"normal growth on magnesium dichloride","type":"exact"},{"name":"normal vegetative cell population growth on magnesium chloride","type":"exact"}],"termid":"FYPO:0005970"}


id: GO:0047189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-amino-L-alanine + oxalyl-CoA = N(3)-oxalyl-L-2,3-diaminopropanoate + CoA.","definition_xrefs":["RHEA:13465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"2,3-diaminopropionate N-oxalyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.58-RXN","KEGG_REACTION:R04211","EC:2.3.1.58"],"synonyms":[{"name":"ODAP synthase activity","type":"related"},{"name":"oxalyl-CoA:L-2,3-diaminopropanoate 3-N-oxalyltransferase activity","type":"related"},{"name":"oxalyl-CoA:L-2,3-diaminopropanoate N3-oxalyltransferase activity","type":"related"},{"name":"oxalyl-CoA:L-alpha,beta-diaminopropionic acid oxalyltransferase activity","type":"related"},{"name":"oxalyldiaminopropionate synthase activity","type":"related"},{"name":"oxalyldiaminopropionic synthase activity","type":"related"}],"termid":"GO:0047189"}


id: MOD:01944
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that forms (2-aminosuccinimidyl)acetic acid by crosslinking either an aspartic acid residue or an asparagine residue with the following residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminosuccinimide ring crosslinked residues","termid":"MOD:01944"}


id: PBO:0051952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor type 1","termid":"PBO:0051952"}


id: PBO:0055028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2443","termid":"PBO:0055028"}


id: GO:0042823
data:
  {"annotated_genes":["SJAG_01881","SJAG_00252","SJAG_00707","SJAG_00283","SJAG_01383","SJAG_00691"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64256,75840],"is_not":false,"summary":null,"term":"GO:0042823"},{"annotations":[93161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[78495,75573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[112133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 biosynthetic process","termid":"GO:0042819"},{"relation_name":"is_a","term_name":"pyridoxal phosphate metabolic process","termid":"GO:0042822"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyridoxal phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-845"],"synonyms":[{"name":"active vitamin B6 biosynthesis","type":"exact"},{"name":"active vitamin B6 biosynthetic process","type":"exact"},{"name":"pyridoxal phosphate anabolism","type":"exact"},{"name":"pyridoxal phosphate biosynthesis","type":"exact"},{"name":"pyridoxal phosphate formation","type":"exact"},{"name":"pyridoxal phosphate synthesis","type":"exact"}],"termid":"GO:0042823","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042823":null}}


id: PBO:0067242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 314, pseudogene","termid":"PBO:0067242"}


id: PBO:0028383
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_outer_repeat","termid":"PBO:0028383"}


id: PBO:0069494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 761, pseudogene","termid":"PBO:0069494"}


id: PBO:0089845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase Erg26","termid":"PBO:0089845"}


id: MONDO:0020422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortopulmonary coronary arterial course is a rare coronary artery congenital malformation characterized by anomalous origin of the coronary artery from the contralateral sinus of Valsalva with course between the aorta and the pulmonary artery. The anomaly is associated with increased risk of sudden cardiac death, especially during exercise.","definition_xrefs":["Orphanet:99086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortopulmonary coronary arterial course","secondary_identifiers":["UMLS:C4757971","MEDGEN:1668023"],"termid":"MONDO:0020422","xrefs":{"Monarch":{"xref_id":"0020422"}}}


id: PBO:0061510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 ribosome biogenesis factor","termid":"PBO:0061510"}


id: SO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_acceptor_variant (SO:0001574) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_acceptor_variant","termid":"SO:0001574"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant_NMD_escaping","synonyms":[{"name":"splice acceptor variant-NMD escaping","type":"exact"},{"name":"splice acceptor variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002328"}


id: GO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells of the B-1 subset such that the total number of B-1 B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell homeostasis","termid":"GO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell homeostasis","synonyms":[{"name":"B-1 B lymphocyte homeostasis","type":"exact"},{"name":"B-1 B-cell homeostasis","type":"exact"},{"name":"B-1 B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001922"}


id: GO:0018415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-2S cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0292"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl L-cysteine persulfido bis-L-glutamato L-histidino nickel triiron disulfide trioxide (obsolete GO:0018415)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl L-cysteine persulphido bis-L-glutamato L-histidino nickel triiron disulphide trioxide","type":"exact"}],"termid":"GO:0018415"}


id: GO:1900812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of helvolic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"helvolic acid metabolic process","termid":"GO:1900810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"helvolic acid biosynthetic process","synonyms":[{"name":"Fumigacin anabolism","type":"related"},{"name":"Fumigacin biosynthesis","type":"related"},{"name":"Fumigacin biosynthetic process","type":"related"},{"name":"Fumigacin formation","type":"related"},{"name":"Fumigacin synthesis","type":"related"},{"name":"helvolic acid anabolism","type":"exact"},{"name":"helvolic acid biosynthesis","type":"exact"},{"name":"helvolic acid formation","type":"exact"},{"name":"helvolic acid synthesis","type":"exact"}],"termid":"GO:1900812"}


id: GO:0060279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of ovulation","termid":"GO:0060278"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovulation","termid":"GO:0060279"}


id: GO:0120164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological and developmental changes that occur in a conidium or asexual spore following release from dormancy up to the earliest signs of development such as swelling of conidia, adhesion and nuclear decondensation followed by hyphal growth several hours later. In many genera of plant pathogenic fungi (e.g. Magnaporthe, Colletotrichum, Ustilago), swelling of the hyphal tips to form appressorium, metabolic activities including respiration, RNA and protein synthesis and trehalose breakdown and changes in cell wall composition can be detected in conidium germination.","definition_xrefs":["PMID:9529886","PMID:10835388","PMID:18944978","PMID:25063657","PMID:17950638","PMID:11377860","PMID:27355215","DOI:10.1128/9781555815523.ch10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conidium germination","termid":"GO:0120164"}


id: GO:2001257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of cation channel activity","synonyms":[{"name":"regulation of cation diffusion facilitator activity","type":"exact"},{"name":"regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001257"}


id: GO:0003779
data:
  {"annotated_genes":["SJAG_01598","SJAG_04886","SJAG_03119","SJAG_00970","SJAG_01993","SJAG_02245","SJAG_03086","SJAG_02431","SJAG_01943","SJAG_03088","SJAG_01754","SJAG_03703","SJAG_00938","SJAG_04982","SJAG_03380","SJAG_00152","SJAG_00677","SJAG_04141","SJAG_04001","SJAG_02396","SJAG_00521","SJAG_03455","SJAG_03229","SJAG_03011","SJAG_04100","SJAG_02566","SJAG_00279","SJAG_02700","SJAG_04621","SJAG_01964","SJAG_01268","SJAG_03465","SJAG_03025","SJAG_01894","SJAG_02075","SJAG_01384","SJAG_04703","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61629,62581,66182,68282,69656,69699,70094,70623,71510],"is_not":false,"summary":null,"term":"GO:0003779"},{"annotations":[77784,79984,76704,79523,76785,80554,76401,70721,75290,70335,73775,74760,78103,71290,79396,70325,71890,79339,78179,78512,80068,75118,76971,80322,75941,76056,77007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051015"},{"annotations":[77577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"},{"annotations":[76054,72411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003785"}]},"cv_name":"molecular_function","definition":"Binding to monomeric or multimeric forms of actin, including actin filaments.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01598":null,"SJAG_01754":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03229":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04141":null,"SJAG_04498":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04886":null,"SJAG_04982":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"actin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null},"synonyms":[{"name":"membrane associated actin binding","type":"narrow"}],"termid":"GO:0003779","terms_by_termid":{"GO:0003779":null,"GO:0003785":null,"GO:0003786":null,"GO:0051015":null}}


id: MONDO:0007830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insensitivity to pain with hyperplastic Myelinopathy","secondary_identifiers":["OMIM:147530","UMLS:C1840172","MEDGEN:327046"],"synonyms":[{"name":"insensitivity to pain with hyperplastic Myelinopathy","type":"exact"}],"termid":"MONDO:0007830","xrefs":{"Monarch":{"xref_id":"0007830"}}}


id: PBO:0079528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-yW synthesizing protein 1 homolog pseudogene 1","termid":"PBO:0079528"}


id: MONDO:0017401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic ventricular dysplasia, left dominant form","secondary_identifiers":["Orphanet:293888","DOID:0070534","GARD:17345","UMLS:C5925017","MEDGEN:1863454"],"synonyms":[{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy, left dominant form","type":"exact"}],"termid":"MONDO:0017401","xrefs":{"Monarch":{"xref_id":"0017401"}}}


id: PBO:0065576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parathyroid hormone 1 receptor","termid":"PBO:0065576"}


id: PR:O60085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine aminopeptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03176","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.03","secondary_identifiers":["UniProtKB:O60085"],"synonyms":[{"name":"MAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MetAP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-METAP2","type":"exact"},{"name":"peptidase M (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60085"}


id: MONDO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solitary necrotic tumor of the liver is a rare nonmalignant hepatic lesion characterized by a mass with a completely necrotic core often partially calcified, surrounded by a dense hyalinized fibrous capsule containing elastin fibers. Patients are usually asymptomatic but some may suffer from intermittent abdominal pain or discomfort.","definition_xrefs":["Orphanet:100035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"solitary necrotic nodule of the liver","secondary_identifiers":["UMLS:C2960192","icd11.foundation:209168589","MEDGEN:755361","SCTID:447058001","GARD:19743"],"synonyms":[{"name":"hepatic solitary necrotic nodule","type":"exact"}],"termid":"MONDO:0015049","xrefs":{"Monarch":{"xref_id":"0015049"}}}


id: GO:1903690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GOC:als","PMID:18394891","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"negatively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"down regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"down-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"downregulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"inhibition of wound healing, spreading of epidermal cells","type":"narrow"}],"termid":"GO:1903690"}


id: GO:1902849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuronal signal transduction.","definition_xrefs":["GO_REF:0000058","GOC:sjp","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of neuronal signal transduction","termid":"GO:1902847"},{"relation_name":"positively_regulates","term_name":"neuronal signal transduction","termid":"GO:0023041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuronal signal transduction","synonyms":[{"name":"activation of neuronal signal transduction","type":"narrow"},{"name":"up regulation of neuronal signal transduction","type":"exact"},{"name":"up-regulation of neuronal signal transduction","type":"exact"},{"name":"upregulation of neuronal signal transduction","type":"exact"}],"termid":"GO:1902849"}


id: GO:0061691
data:
  {"annotated_genes":["SJAG_00141","SJAG_02515","SJAG_01199","SJAG_04823","SJAG_01216","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95530,105367,117666,118588,109148,100324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of hydrogen peroxide. These include transport of hydrogen peroxide away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"},{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to hydrogen peroxide","termid":"GO:0042542"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061691","terms_by_termid":{"GO:0061692":null}}


id: PBO:0079844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-13 homolog C","termid":"PBO:0079844"}


id: GO:0043924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to suramin, a naphthalenesulfonic acid compound which is used in the treatment of diseases caused by trypanosomes and worms.","definition_xrefs":["GOC:jl","Wikipedia:Suramin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"suramin binding","synonyms":[{"name":"Germanin binding","type":"exact"}],"termid":"GO:0043924"}


id: PBO:0069455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 720, pseudogene","termid":"PBO:0069455"}


id: MONDO:0017508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of fingers excluding thumb, bilateral (obsolete MONDO:0017508)","secondary_identifiers":["Orphanet:295114"],"synonyms":[{"name":"Adactyly of hand, bilateral","type":"exact"},{"name":"digits 2-5 hypodactyly, bilateral","type":"exact"},{"name":"digits 2-5 oligodactyly, bilateral","type":"exact"}],"termid":"MONDO:0017508","xrefs":{"Monarch":{"xref_id":"0017508"}}}


id: PBO:0043143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 11","termid":"PBO:0043143"}


id: GO:2000480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"},{"relation_name":"is_a","term_name":"regulation of cAMP-dependent protein kinase activity","termid":"GO:2000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"negative regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of AMPK","type":"related"},{"name":"negative regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"negative regulation of PKA","type":"related"},{"name":"negative regulation of PKA C","type":"related"},{"name":"negative regulation of STK22","type":"related"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"negative regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000480"}


id: MONDO:0021465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendiceal neoplasm","termid":"MONDO:0001236"},{"relation_name":"is_a","term_name":"benign neoplasm of cecum","termid":"MONDO:0021464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of appendix","secondary_identifiers":["SCTID:91981009","UMLS:C0496860","ICD10CM:D12.1","icd11.foundation:7146014","MEDGEN:99221","NCIT:C4773"],"synonyms":[{"name":"benign appendix neoplasm","type":"exact"},{"name":"benign appendix tumor","type":"exact"},{"name":"benign appendix tumour","type":"exact"},{"name":"benign neoplasm of the appendix","type":"exact"},{"name":"benign tumor of appendix","type":"exact"},{"name":"benign tumor of the appendix","type":"exact"},{"name":"benign tumour of appendix","type":"exact"},{"name":"benign tumour of the appendix","type":"exact"},{"name":"vermiform appendix benign neoplasm","type":"exact"}],"termid":"MONDO:0021465","xrefs":{"Monarch":{"xref_id":"0021465"}}}


id: PBO:0064574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PORCN divergent transcript","termid":"PBO:0064574"}


id: GO:0002757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated by a ligand binding to its receptor that lead to the activation or perpetuation of an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"immune response-regulating signaling pathway","termid":"GO:0002764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"immune response-activating signaling pathway","synonyms":[{"name":"immune response-activating signal transduction","type":"exact"}],"termid":"GO:0002757"}


id: FYPO:0002953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of S-adenosyl-L-methionine measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased S-adenosyl-L-methionine level during G0","synonyms":[{"name":"increased S-adenosyl-L-methionine accumulation during G0","type":"related"},{"name":"increased S-adenosyl-L-methionine level during cell quiescence","type":"exact"},{"name":"increased S-adenosyl-L-methionine level during quiescence","type":"exact"},{"name":"increased S-adenosylmethionine level during G0","type":"exact"},{"name":"increased SAM level during G0","type":"exact"}],"termid":"FYPO:0002953"}


id: MONDO:0018876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mantle cell lymphoma is a rare form of malignant non-Hodgkin lymphoma affecting B lymphocytes in the lymph nodes in a region called the ``mantle zone''.","definition_xrefs":["Orphanet:52416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive B-cell non-Hodgkin lymphoma","termid":"MONDO:0017595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"mantle cell lymphoma","secondary_identifiers":["NCIT:C4337","icd11.foundation:1804127841","NORD:1399","ONCOTREE:MCL","SCTID:443487006","EFO:1001469","UMLS:C4721414","GARD:6969","ICDO:9673/3","MEDGEN:1668377","MESH:D020522","ICD9:200.40","DOID:0050746","MedDRA:10061275"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"MCL","type":"exact"},{"name":"classical mantle cell lymphoma","type":"exact"},{"name":"lymphoma, mantle cell","type":"related"},{"name":"mantle cell lymphoma","type":"exact"},{"name":"mantle zone lymphoma","type":"exact"}],"termid":"MONDO:0018876","xrefs":{"Monarch":{"xref_id":"0018876"}}}


id: GO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ergothioneine, a naturally occurring metabolite of histidine with antioxidant properties.","definition_xrefs":["Wikipedia:Ergothioneine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"amino-acid betaine catabolic process","termid":"GO:0006579"},{"relation_name":"is_a","term_name":"ergothioneine metabolic process","termid":"GO:0052698"},{"relation_name":"is_a","term_name":"modified histidine catabolic process","termid":"GO:0052702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"ergothioneine catabolic process","synonyms":[{"name":"(2S)-3-(2-mercapto-1H-imidazol-5-yl)-2-(trimethylazaniumyl)propanoate catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine breakdown","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolic process","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine catabolism","type":"exact"},{"name":"2-mercaptoergothioneine trimethylbetaine degradation","type":"exact"},{"name":"ergothioneine breakdown","type":"exact"},{"name":"ergothioneine catabolism","type":"exact"},{"name":"ergothioneine degradation","type":"exact"}],"termid":"GO:0052700"}


id: MONDO:0010185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria, an inborn error of vitamin B12 (cobalamin) metabolism characterized by variable biochemical, neurological and hematological manifestations.","definition_xrefs":["Orphanet:79283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"},{"relation_name":"is_a","term_name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria type cblD","secondary_identifiers":["MESH:C564743","MEDGEN:341253","NANDO:2201108","SCTID:31220004","GARD:3582","NANDO:1200797","OMIM:277410","DOID:0050716","UMLS:C1848552"],"synonyms":[{"name":"MAHCD","type":"related"},{"name":"Mehtylmalonic acidemia with homocystinuria cbI d","type":"related"},{"name":"cblD - cobalamin locus d","type":"related"},{"name":"cblD defect","type":"exact"},{"name":"cblD methylmalonic acidemia and homocystinuria","type":"related"},{"name":"cobalamin D defect","type":"exact"},{"name":"cobalamin D deficiency","type":"exact"},{"name":"cobalamin d disease","type":"exact"},{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis, type cblD","type":"exact"},{"name":"homocystinuria, cblD type, variant 1","type":"related"},{"name":"homocystinuria, cblD type, variant 1, included","type":"related"},{"name":"m0e.321 cobalamin locus d variant","type":"related"},{"name":"methylmalonic acidemia and homocystinuria, cblD type","type":"related"},{"name":"methylmalonic acidemia with homocystinuria type cblD","type":"related"},{"name":"methylmalonic acidemia with homocystinuria, type cblD","type":"related"},{"name":"methylmalonic acidemia, Cblh type","type":"related"},{"name":"methylmalonic acidemia, Cblh type, formerly","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblD","type":"exact"},{"name":"methylmalonic aciduria and homocystinuria, cblD type","type":"related"},{"name":"methylmalonic aciduria with homocystinuria, type cblD","type":"exact"},{"name":"methylmalonic aciduria, Cblh type","type":"related"},{"name":"methylmalonic aciduria, Cblh type, formerly","type":"related"},{"name":"methylmalonic aciduria, cblD type, variant 2","type":"related"},{"name":"methylmalonic aciduria, cblD type, variant 2, included","type":"related"}],"termid":"MONDO:0010185","xrefs":{"Monarch":{"xref_id":"0010185"}}}


id: GO:0050867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell activation","synonyms":[{"name":"activation of cell activation","type":"narrow"},{"name":"stimulation of cell activation","type":"narrow"},{"name":"up regulation of cell activation","type":"exact"},{"name":"up-regulation of cell activation","type":"exact"},{"name":"upregulation of cell activation","type":"exact"}],"termid":"GO:0050867"}


id: GO:0140760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri or a dimethyl-lysine residue at position 56 of the histone H3 protein.","definition_xrefs":["PMID:23451023","PMID:28743002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0032452","GO:0016491"],"is_obsolete":false,"name":"histone H3K56me2/H3K56me3 demethylase activity","synonyms":[{"name":"histone H3-tri/dimethyl-lysine-56 demethylase activity","type":"exact"},{"name":"histone H3K56me2 demethylase activity","type":"related"},{"name":"histone H3K56me3 demethylase activity","type":"related"},{"name":"histone demethylase activity (H3-K56 specific)","type":"related"}],"termid":"GO:0140760"}


id: FYPO:0001491
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04280:allele-3":{"allele_type":"amino_acid_mutation","description":"G788E","gene_uniquename":"SJAG_04280","name":"wee1-G788E","uniquename":"SJAG_04280:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119789,119788,119792,119665],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0000648"},{"annotations":[119641,119604,119615,119609],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119790,119791,119797],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetatively growing cell is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02013":null,"SJAG_02819":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":9,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]},"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-G788E(aa)","display_uniquename":"wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-3","expression":"Not assayed or wild type"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"viable vegetative cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_03048","SJAG_02013","SJAG_01794","SJAG_03453","SJAG_00514","SJAG_02819","SJAG_04280","SJAG_03581"],"single_locus_genotype_uniquenames":["cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","efc25delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","pyp1delta","scd2delta","ras1delta","gef1delta","scd1delta"],"synonyms":[{"name":"viable cell during vegetative growth","type":"exact"},{"name":"viable vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001491","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000648":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0080754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 2","termid":"PBO:0080754"}


id: GO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acidic epididymal glycoprotein (obsolete GO:0005191)","synonyms":[{"name":"acidic epididymal glycoprotein","type":"exact"}],"termid":"GO:0005191"}


id: SO:0002316
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that decreases the level or amount of gene product produced.","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered_gene_product_level","termid":"SO:0002314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_gene_product_level","synonyms":[{"name":"decreased gene product level","type":"exact"},{"name":"decreased transcription level","type":"exact"},{"name":"decreased_transcription_level","type":"exact"},{"name":"reduced gene product level","type":"exact"},{"name":"reduced transcription level","type":"exact"},{"name":"reduced_gene_product_level","type":"exact"},{"name":"reduced_transcription_level","type":"exact"}],"termid":"SO:0002316"}


id: PBO:0062626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 3 pseudogene","termid":"PBO:0062626"}


id: PBO:0084151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity nicotinamide riboside transporter; also transports thiamine with low affinity; major transporter for 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine) uptake; shares sequence similarity with Thi7p and Thi72p; proposed to be involved in 5-fluorocytosine sensitivity","termid":"PBO:0084151"}


id: PBO:0048542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET1 pseudogene 1","termid":"PBO:0048542"}


id: FYPO:0009051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing ammonium as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"increased cell population growth on ammonium nitrogen source","synonyms":[{"name":"increased growth on ammonium nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on ammonium nitrogen source","type":"exact"}],"termid":"FYPO:0009051"}


id: MONDO:0010857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Semantic dementia (SD) is a form of frontotemporal dementia (FTD), characterized by the progressive, amodal and profound loss of semantic knowledge (combination of visual associative agnosia, anomia, surface dyslexia or dysgraphia and disrupted comprehension of word meaning) and behavioral abnormalities, attributable to the degeneration of the anterior temporal lobes.","definition_xrefs":["Orphanet:100069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive non-fluent aphasia","termid":"MONDO:0015059"},{"relation_name":"is_a","term_name":"behavioral variant of frontotemporal dementia","termid":"MONDO:0017160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"semantic dementia","secondary_identifiers":["GARD:10792","DOID:0081391","OMIM:600274","UMLS:C0338462","MEDGEN:83268","NANDO:1200550"],"synonyms":[{"name":"FTD","type":"related"},{"name":"Ftdp17","type":"related"},{"name":"Ftld with Tau inclusions","type":"related"},{"name":"Pallidopontonigral Degeneration","type":"related"},{"name":"Pick Complex","type":"related"},{"name":"Wilhelmsen-Lynch disease","type":"related"},{"name":"dementia, frontotemporal","type":"exact"},{"name":"dementia, frontotemporal, with Parkinsonism","type":"related"},{"name":"dementia, frontotemporal, with or without parkinsonism","type":"exact"},{"name":"disinhibition-dementia-Parkinsonism-amyotrophy Complex","type":"related"},{"name":"frontotemporal dementia","type":"related"},{"name":"frontotemporal dementia with Parkinsonism","type":"related"},{"name":"frontotemporal lobar Degeneration with Tau inclusions","type":"related"},{"name":"frontotemporal lobe dementia","type":"related"},{"name":"multiple system tauopathy with presenile dementia","type":"related"},{"name":"semantic primary progressive aphasia","type":"exact"},{"name":"semantic variant PPA","type":"exact"}],"termid":"MONDO:0010857","xrefs":{"Monarch":{"xref_id":"0010857"}}}


id: MONDO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonspecific term used to denote any cutaneous lesion or group of lesions, or eruptions of any type on the leg. (From Stedman, 25th ed)","definition_xrefs":["MESH:D007868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"leg dermatosis","secondary_identifiers":["DOID:3142","UMLS:C0023219","MEDGEN:9700"],"termid":"MONDO:0006569","xrefs":{"Monarch":{"xref_id":"0006569"}}}


id: PBO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_vegetative_growth","termid":"PBO:0031441"}


id: MONDO:0013210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the GRXCR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 25","secondary_identifiers":["OMIM:613285","DOID:0110483","GARD:22632","MEDGEN:237587","UMLS:C1414017"],"synonyms":[{"name":"DFNB25","type":"narrow"},{"name":"GRXCR1 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 25","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 25","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in GRXCR1","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 25","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 25","type":"exact"},{"name":"deafness, autosomal recessive 25","type":"narrow"},{"name":"deafness, autosomal recessive type 25","type":"narrow"}],"termid":"MONDO:0013210","xrefs":{"Monarch":{"xref_id":"0013210"}}}


id: PBO:0048552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GFOD1 antisense RNA 1","termid":"PBO:0048552"}


id: PBO:0061533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE4 homolog A, SMC5-SMC6 complex component","termid":"PBO:0061533"}


id: PBO:0036136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2B-K119_ubiquitination_during_vegetative_growth","termid":"PBO:0036136"}


id: MONDO:0006884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute suppurative inflammation of the inner eye with necrosis of the sclera (and sometimes the cornea) and extension of the inflammation into the orbit. Pain may be severe and the globe may rupture. In endophthalmitis the globe does not rupture.","definition_xrefs":["MESH:D010202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"},{"relation_name":"is_a","term_name":"purulent endophthalmitis","termid":"MONDO:0004863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"panophthalmitis","secondary_identifiers":["SCTID:33382000","ICD9:360.02","UMLS:C0030332","MedDRA:10033683","DOID:13732","icd11.foundation:349386559","MEDGEN:10561"],"termid":"MONDO:0006884","xrefs":{"Monarch":{"xref_id":"0006884"}}}


id: GO:0052743
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990649"},{"annotations":[108612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052659"},{"annotations":[108614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol tetrakisphosphate + H2O = myo-inositol trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate phosphatase activity","termid":"GO:0052745"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"inositol tetrakisphosphate phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052743","terms_by_termid":{"GO:0052659":null,"GO:1990649":null,"GO:1990650":null}}


id: MOD:02058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tyrosine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-tyrosine residue","synonyms":[{"name":"XlnkTyr","type":"exact"}],"termid":"MOD:02058"}


id: MONDO:0005849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to milk (usually cow's milk) or milk products. milk hypersensitivity should be differentiated from lactose intolerance, an intolerance to milk as a result of congenital deficiency of lactase.","definition_xrefs":["MESH:D016269"],"gene_count":0,"genotype_count":0,"name":"obsolete milk allergic reaction (obsolete MONDO:0005849)","secondary_identifiers":["DOID:4376"],"synonyms":[{"name":"milk allergic reaction","type":"exact"},{"name":"milk allergy","type":"related"}],"termid":"MONDO:0005849","xrefs":{"Monarch":{"xref_id":"0005849"}}}


id: GO:1904580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["GOC:TermGenie","PMID:21471000","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular mRNA localization","synonyms":[{"name":"regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"regulation of intracellular mRNA localisation","type":"exact"},{"name":"regulation of intracellular mRNA positioning","type":"narrow"},{"name":"regulation of mRNA localization, intracellular","type":"exact"},{"name":"regulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904580"}


id: PBO:0043471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 8","termid":"PBO:0043471"}


id: MONDO:0008571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Blount disease","termid":"MONDO:0017194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Blount disease, infantile","secondary_identifiers":["OMIM:188700","GARD:15120","MEDGEN:65091","UMLS:C0220757"],"synonyms":[{"name":"Blount disease, infantile","type":"exact"},{"name":"Osteochondrosis deformans tibiae, infantile","type":"related"},{"name":"tibia vara, infantile","type":"related"}],"termid":"MONDO:0008571","xrefs":{"Monarch":{"xref_id":"0008571"}}}


id: PBO:0051490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 8","termid":"PBO:0051490"}


id: PBO:0061089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 8","termid":"PBO:0061089"}


id: PBO:0108604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_negatively_regulates","termid":"PBO:0108604"}


id: MONDO:0014255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor b deficiency","secondary_identifiers":["OMIM:615561","UMLS:C3809950","MEDGEN:816280","NANDO:2200797"],"synonyms":[{"name":"CFBD","type":"related"},{"name":"complement factor B deficiency","type":"related"},{"name":"complement factor b deficiency","type":"exact"}],"termid":"MONDO:0014255","xrefs":{"Monarch":{"xref_id":"0014255"}}}


id: GO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from a DNA template as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:txnOH","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA-templated transcription in response to stress (obsolete GO:0043620)","synonyms":[{"name":"regulation of DNA-dependent transcription in response to stress","type":"exact"}],"termid":"GO:0043620"}


id: GO:1901011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of (S)-reticuline.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-reticuline catabolic process (obsolete GO:1901011)","synonyms":[{"name":"(S)-reticuline breakdown","type":"exact"},{"name":"(S)-reticuline catabolism","type":"exact"},{"name":"(S)-reticuline degradation","type":"exact"}],"termid":"GO:1901011"}


id: MONDO:0014508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the IMPG1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"IMPG1-related recessive retinopathy","termid":"MONDO:1040037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 4","secondary_identifiers":["GARD:16064","OMIM:616151","MEDGEN:863779","UMLS:C4015342"],"synonyms":[{"name":"IMPG1 vitelliform macular dystrophy","type":"exact"},{"name":"VMD4","type":"related"},{"name":"macular dystrophy, vitelliform, 4","type":"exact"},{"name":"macular dystrophy, vitelliform, type 4","type":"exact"},{"name":"vitelliform macular dystrophy caused by mutation in IMPG1","type":"exact"}],"termid":"MONDO:0014508","xrefs":{"Monarch":{"xref_id":"0014508"}}}


id: GO:0042680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a compound eye cone cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"compound eye cone cell fate commitment","termid":"GO:0042676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye cone cell fate determination","secondary_identifiers":["GO:0042677"],"termid":"GO:0042680"}


id: GO:0100060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any DNA binding that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by DNA binding (obsolete GO:0100060)","termid":"GO:0100060"}


id: PBO:0076265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI5 homologous recombination repair protein","termid":"PBO:0076265"}


id: FYPO:0005610
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to a smaller portion of the chromosome than normal in the region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PomBase:mah","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased spatial extent of protein localization to double-strand break site","synonyms":[{"name":"decreased spatial extent of protein localisation to double-strand break site","type":"exact"},{"name":"decreased spatial extent of protein localization to DSB","type":"exact"},{"name":"decreased spatial extent of protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased spatial extent of protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased spatial extent of protein localization to site of double-strand break","type":"exact"},{"name":"reduced spatial extent of protein localization to double-strand break","type":"exact"}],"termid":"FYPO:0005610"}


id: PBO:0077741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOB1 antisense RNA 1","termid":"PBO:0077741"}


id: PATO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000727 behavioral function value (obsolete PATO:0000727)","termid":"PATO:0000727"}


id: GO:0042082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a glycosylsphingolipidinositol (GSI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The sphingolipid group is linked, via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via a ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GSI anchors have variants on this canonical linkage.","definition_xrefs":["GOC:go_curators","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process (obsolete GO:0042082)","synonyms":[{"name":"GPI/GSI anchor biosynthesis","type":"broad"},{"name":"GPI/GSI anchor biosynthetic process","type":"broad"},{"name":"GSI anchor anabolism","type":"exact"},{"name":"GSI anchor biosynthesis","type":"exact"},{"name":"GSI anchor formation","type":"exact"},{"name":"GSI anchor synthesis","type":"exact"}],"termid":"GO:0042082"}


id: GO:0047252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1->6)-alpha-D-mannosyloligosaccharide + beta-D-mannosylphosphodecaprenol = (1->6)-alpha-D-mannosyl-(1->6)-alpha-D-mannosyl-oligosaccharide + decaprenol phosphate.","definition_xrefs":["MetaCyc:2.4.1.199-RXN","EC:2.4.1.199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"beta-mannosylphosphodecaprenol-mannooligosaccharide 6-mannosyltransferase activity","synonyms":[{"name":"beta-D-mannosylphosphodecaprenol:1,6-alpha-D-mannosyloligosaccharide 1,6-alpha-D-mannosyltransferase activity","type":"related"},{"name":"mannosylphospholipid-methylmannoside alpha-1,6-mannosyltransferase activity","type":"related"}],"termid":"GO:0047252"}


id: MONDO:0005620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis (HCHWA) describes a group of rare familial central nervous system disorders characterized by amyloid deposition in the cerebral blood vessels leading to hemorrhagic and non-hemorrhagic strokes, focal neurological deficits, and progressive cognitive decline eventually leading to dementia.","definition_xrefs":["Orphanet:85458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"cerebral amyloid angiopathy","secondary_identifiers":["SCTID:230724001","ICD10EXP:I68.0*","UMLS:C1510489","GARD:10266","MESH:D016657","NCIT:C84625","ICD9:277.39","DOID:9246","MEDGEN:267610","ICD10CM:I68.0","EFO:0006790","ICD10EXP:E85.4+"],"synonyms":[{"name":"CAA, familial","type":"related"},{"name":"HCHWA","type":"exact"},{"name":"cerebral amyloid angiopathy, familial","type":"related"},{"name":"cerebral amyloid angiopathy, genetic","type":"related"},{"name":"dutch hereditary cerebral amyloid angiopathy","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis - Dutch type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis - Dutch type","type":"exact"}],"termid":"MONDO:0005620","xrefs":{"Monarch":{"xref_id":"0005620"}}}


id: PBO:0079074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-2","termid":"PBO:0079074"}


id: FYPO:0005605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which sites at which the protein Ssb1 accumulates remain present for longer than normal during a cellular response to ionizing radiation.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation","synonyms":[{"name":"delayed peak level of Ssb1 foci","type":"related"},{"name":"increased duration of RPA focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rad11 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Rpa1 focus presence during cellular response to ionizing radiation","type":"exact"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"increased duration of Ssb1 focus presence during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"increased persistence of Ssb1 foci during cellular response to ionizing radiation","type":"exact"},{"name":"prolonged Ssb1 focus presence during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0005605"}


id: GO:0006302
data:
  {"annotated_genes":["SJAG_00696","SJAG_02690","SJAG_02545","SJAG_05105","SJAG_05237","SJAG_04457","SJAG_02828","SJAG_02822","SJAG_03720","SJAG_05232","SJAG_05295","SJAG_02708","SJAG_02104","SJAG_01205","SJAG_05373","SJAG_05323","SJAG_00213","SJAG_01776","SJAG_02556","SJAG_00640","SJAG_00857","SJAG_01044","SJAG_04843","SJAG_00980","SJAG_04372","SJAG_03048","SJAG_03417","SJAG_00153","SJAG_03026","SJAG_01624","SJAG_04142","SJAG_01873","SJAG_00623","SJAG_02267","SJAG_01076","SJAG_02575","SJAG_03855","SJAG_03941","SJAG_02465","SJAG_00757","SJAG_01698","SJAG_03221","SJAG_03160","SJAG_00823","SJAG_00475","SJAG_03898","SJAG_02339","SJAG_01332","SJAG_02698","SJAG_04971","SJAG_05372","SJAG_04199","SJAG_03942","SJAG_02527","SJAG_02294","SJAG_03926","SJAG_04039","SJAG_03994","SJAG_02079","SJAG_02837","SJAG_01762","SJAG_00327","SJAG_02262","SJAG_00805","SJAG_01677","SJAG_00441","SJAG_04183","SJAG_01573","SJAG_01938","SJAG_01173","SJAG_00796","SJAG_03702","SJAG_04995","SJAG_01611","SJAG_04210","SJAG_03722","SJAG_05180","SJAG_01878","SJAG_01832","SJAG_01652","SJAG_02616","SJAG_02348","SJAG_03436","SJAG_16460","SJAG_01354","SJAG_01067","SJAG_00884","SJAG_00935","SJAG_00177","SJAG_02237","SJAG_00369","SJAG_01410","SJAG_04530","SJAG_04932","SJAG_01708","SJAG_02460","SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72048,72125,76295,79541,79694,92128,116042,117595,118005],"is_not":false,"summary":null,"term":"GO:0006302"},{"annotations":[112033,80216,72490,96341,73312,88879,89501],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000729"},{"annotations":[65204,72616,75464,65784,76198],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000730"},{"annotations":[117095,89502,88881,99381,107974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990918"},{"annotations":[71374,72392,74777,73812,73626,70294,78535,80669,74974,99606,112340,77750,80335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000727"},{"annotations":[114196,116625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[77500,79771,97428,117096,74618,79163,88734,74658,80640,75620,104183,95211,116552,100934,88385,78062,118018,71672,106062,91207,70967,78199,106623,104469,111797,118161,72731,103511,79887,78474,112036,71129,70594,75314,101492,97014,79875,77491,108061,89503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000724"},{"annotations":[114586,112037,89504,100265,105353,88883,117097,111258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006303"},{"annotations":[111132,76890,77333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045002"},{"annotations":[75315],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000736"},{"annotations":[71441,108459,78323,117743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045003"},{"annotations":[96210],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[108063,79594,117099],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000706"},{"annotations":[78909],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000707"},{"annotations":[110614,107976],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010772"},{"annotations":[100968],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902346"},{"annotations":[79769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097552"},{"annotations":[102681],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[110493,94224],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000781"},{"annotations":[107719],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001034"},{"annotations":[73024,91250],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000779"},{"annotations":[109630],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010569"},{"annotations":[75600,70189,72554,75236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990414"}]},"cv_name":"biological_process","definition":"The repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":97,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00177":null,"SJAG_00213":null,"SJAG_00327":null,"SJAG_00369":null,"SJAG_00441":null,"SJAG_00475":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_00696":null,"SJAG_00757":null,"SJAG_00796":null,"SJAG_00805":null,"SJAG_00823":null,"SJAG_00857":null,"SJAG_00884":null,"SJAG_00935":null,"SJAG_00980":null,"SJAG_01044":null,"SJAG_01067":null,"SJAG_01076":null,"SJAG_01173":null,"SJAG_01205":null,"SJAG_01332":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01573":null,"SJAG_01611":null,"SJAG_01624":null,"SJAG_01652":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01776":null,"SJAG_01832":null,"SJAG_01873":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02079":null,"SJAG_02104":null,"SJAG_02237":null,"SJAG_02262":null,"SJAG_02267":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02348":null,"SJAG_02460":null,"SJAG_02465":null,"SJAG_02527":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02690":null,"SJAG_02698":null,"SJAG_02708":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_02837":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03221":null,"SJAG_03417":null,"SJAG_03436":null,"SJAG_03454":null,"SJAG_03702":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03926":null,"SJAG_03941":null,"SJAG_03942":null,"SJAG_03994":null,"SJAG_04039":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04199":null,"SJAG_04210":null,"SJAG_04372":null,"SJAG_04457":null,"SJAG_04530":null,"SJAG_04843":null,"SJAG_04932":null,"SJAG_04971":null,"SJAG_04995":null,"SJAG_05105":null,"SJAG_05180":null,"SJAG_05232":null,"SJAG_05237":null,"SJAG_05295":null,"SJAG_05323":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"double-strand break repair","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693532"],"termid":"GO:0006302","terms_by_termid":{"GO:0000706":null,"GO:0000707":null,"GO:0000724":null,"GO:0000727":null,"GO:0000729":null,"GO:0000730":null,"GO:0000736":null,"GO:0006302":null,"GO:0006303":null,"GO:0010569":null,"GO:0010772":null,"GO:0045002":null,"GO:0045003":null,"GO:0061674":null,"GO:0097552":null,"GO:0097680":null,"GO:1902346":null,"GO:1990414":null,"GO:1990918":null,"GO:2000779":null,"GO:2000781":null,"GO:2001033":null,"GO:2001034":null}}


id: MONDO:0000349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Charcot-Marie-Tooth disease type 1 (obsolete MONDO:0000349)","termid":"MONDO:0000349","xrefs":{"Monarch":{"xref_id":"0000349"}}}


id: PBO:0090667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex subunit, membrane tether and lipid transfer protein Mmm1","termid":"PBO:0090667"}


id: MONDO:0021758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Agranulocytosis that is autoimmune in origin.","definition_xrefs":["PMID:443260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agranulocytosis","termid":"MONDO:0001609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acquired agranulocytosis","secondary_identifiers":["MEDGEN:115995","SCTID:72050006","GARD:5717","MESH:C538171","NORD:743","UMLS:C0235585"],"synonyms":[{"name":"Agranulocytosis, Acquired","type":"exact"},{"name":"agranulocytic angina","type":"related"},{"name":"agranulocytosis, acquired","type":"related"},{"name":"granulocytopenia, primary","type":"related"},{"name":"neutropenia, malignant","type":"related"}],"termid":"MONDO:0021758","xrefs":{"Monarch":{"xref_id":"0021758"}}}


id: PBO:0038324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_disease_slug","termid":"PBO:0038324"}


id: PBO:0064666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 1","termid":"PBO:0064666"}


id: PBO:0027750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_nitrogen_starvation","termid":"PBO:0027750"}


id: GO:1905200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of gibberellic acid across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","PMID:27139299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"gibberellic acid transmembrane transport","termid":"GO:1905200"}


id: PBO:0059234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L4","termid":"PBO:0059234"}


id: MONDO:0002008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the inner ear. The cause is often not clear. It may be due to a virus, but it can also arise from bacterial infection, head injury, extreme stress, an allergy, or as a reaction to medication.","definition_xrefs":["NCIT:C128369","Wikipedia:Labyrinthitis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious otitis interna","termid":"MONDO:0002812"},{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"labyrinthitis","secondary_identifiers":["DOID:3930","icd11.foundation:901550793","MESH:D007762","SCTID:23919004","UMLS:C0022893","ICD10CM:H83.0","DOID:1468","EFO:0009604","ICD9:386.3","MEDGEN:5991","ICD9:386.30"],"synonyms":[{"name":"inflammation of internal ear","type":"exact"},{"name":"inner ear infection","type":"related"},{"name":"internal ear inflammation","type":"exact"},{"name":"otitis interna","type":"exact"}],"termid":"MONDO:0002008","xrefs":{"Monarch":{"xref_id":"0002008"}}}


id: PBO:0113140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor-like protein; involved in negatively regulating TORC1 activity; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0113140"}


id: GO:0016870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for intramolecular transferases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete intramolecular transferase activity, transferring other groups (obsolete GO:0016870)","synonyms":[{"name":"intramolecular transferase activity, transferring other groups","type":"exact"}],"termid":"GO:0016870"}


id: GO:0035196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional miRNA. Includes the cleavage of stem-loop RNA precursors into microRNAs (miRNAs). miRNAs are a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.","definition_xrefs":["PMID:15066275","PMID:23985560","GOC:bc","GOC:aruk","GOC:rl","PMID:28379604","GOC:tb","GOC:dph","PMID:15066283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"miRNA processing","secondary_identifiers":["GO:0030918"],"synonyms":[{"name":"gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"miRNA biogenesis","type":"related"},{"name":"miRNA biosynthetic process","type":"broad"},{"name":"miRNA maturation","type":"exact"},{"name":"miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"microRNA biogenesis","type":"exact"},{"name":"microRNA biosynthesis","type":"broad"},{"name":"microRNA biosynthetic process","type":"broad"},{"name":"microRNA metabolic process","type":"broad"},{"name":"microRNA metabolism","type":"broad"},{"name":"microRNA processing","type":"exact"},{"name":"microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"production of microRNAs involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035196"}


id: GO:0052008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of a host cellular anatomical structure. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host anatomical structure","termid":"GO:0052111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host cellular anatomical structure","synonyms":[{"name":"catabolism of host cellular component by organism","type":"exact"},{"name":"catabolism of host structural constituent by organism","type":"exact"},{"name":"cytopathogenic effect","type":"related"},{"name":"degradation of host cellular component by organism","type":"exact"},{"name":"disassembly by organism of host cellular component","type":"exact"},{"name":"disassembly by symbiont of host cellular component","type":"related"},{"name":"disruption by symbiont of host cellular component","type":"exact"},{"name":"symbiont-mediated disruption of host cellular anatomical entity","type":"exact"},{"name":"symbiont-mediated disruption of host cellular component","type":"broad"}],"termid":"GO:0052008"}


id: PBO:0027686
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_branched,_elongated_cell","termid":"PBO:0027686"}


id: PBO:0076758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymine-DNA glycosylase pseudogene 1","termid":"PBO:0076758"}


id: GO:0004640
data:
  {"annotated_genes":["SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79585],"is_not":false,"summary":null,"term":"GO:0004640"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.","definition_xrefs":["RHEA:21540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylanthranilate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:5.3.1.24","MetaCyc:PRAISOM-RXN","KEGG_REACTION:R03509"],"synonyms":[{"name":"IGPS:PRAI (indole-3-glycerol-phosphate synthetase/N-5'-phosphoribosylanthranilate isomerase complex)","type":"related"},{"name":"N-(5'-phosphoribosyl)anthranilate isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate aldose-ketose-isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate ketol-isomerase activity","type":"related"},{"name":"PRA isomerase activity","type":"related"},{"name":"PRAI activity","type":"related"}],"termid":"GO:0004640","terms_by_termid":{"GO:0004640":null}}


id: PBO:0073446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFR1 pseudogene 2","termid":"PBO:0073446"}


id: MONDO:0009416
data:
  {"annotated_genes":["SJAG_04394","SJAG_02426","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85403,85404,85405],"is_not":false,"summary":null,"term":"MONDO:0009416"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"hypoinsulinemic hypoglycemia and body hemihypertrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112263","MEDGEN:480014","Orphanet:293964","UMLS:C3278384","OMIM:240900","GARD:17352"],"synonyms":[{"name":"HIHGHH","type":"related"},{"name":"hypoinsulinemic hypoglycemia with hemihypertrophy","type":"related"}],"termid":"MONDO:0009416","terms_by_termid":{"MONDO:0009416":null},"xrefs":{"Monarch":{"xref_id":"0009416"}}}


id: PBO:0017426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_integral_part","termid":"PBO:0017426"}


id: MONDO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 49","secondary_identifiers":["MEDGEN:1742668","UMLS:C5436887","OMIM:619144","DOID:0112271"],"synonyms":[{"name":"SPGF49","type":"exact"},{"name":"spermatogenic failure 49","type":"exact"}],"termid":"MONDO:0030868","xrefs":{"Monarch":{"xref_id":"0030868"}}}


id: PBO:0081626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 556","termid":"PBO:0081626"}


id: GO:1904370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to actin cortical patch","synonyms":[{"name":"regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904370"}


id: PR:000027586
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Pat1 kinase. Example: UniProtKB:P08965-1, Ser-438, MOD:00046|Thr-527, MOD:00047.","definition_xrefs":["PMID:9062192","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/Phos(S438,T527)","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: meiosis protein mei2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mei2/Phos:1","type":"exact"},{"name":"mei2/Phos(S438,T527)","type":"exact"}],"termid":"PR:000027586"}


id: GO:2000752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucosylceramide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"glucosylceramide catabolic process","termid":"GO:0006680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of glucosylceramide catabolic process","synonyms":[{"name":"regulation of glucosylceramide breakdown","type":"exact"},{"name":"regulation of glucosylceramide catabolism","type":"exact"},{"name":"regulation of glucosylceramide degradation","type":"exact"}],"termid":"GO:2000752"}


id: PBO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit (predicted)","termid":"PBO:0002563"}


id: MONDO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laryngo-tracheo-esophageal cleft (LC) is a congenital malformation characterized by an abnormal, posterior, sagittal communication between the larynx and the pharynx, possibly extending downward between the trachea and the esophagus.","definition_xrefs":["Orphanet:2004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft","secondary_identifiers":["GARD:3188","icd11.foundation:271795917","MESH:C537875","SCTID:232461002","NCIT:C98622"],"synonyms":[{"name":"LC","type":"exact"},{"name":"LTEC","type":"exact"},{"name":"Larnygeotracheoesophageal cleft","type":"exact"},{"name":"congenital cleft larynx","type":"exact"},{"name":"laryngeal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal diastema","type":"exact"},{"name":"tracheal cleft","type":"exact"}],"termid":"MONDO:0016060","xrefs":{"Monarch":{"xref_id":"0016060"}}}


id: MONDO:0008495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Platelet storage pool deficiency refers to a group of conditions that are caused by problems with the platelet granules. Platelet granules are tiny storage sacs found within the platelets which release various substances to help stop bleeding. Platelet storage pool deficiencies occur when platelet granules are absent, reduced in number, or unable to empty their contents into the bloodstream. The signs and symptoms include frequent nosebleeds; abnormally heavy or prolonged menstruation ; easy bruising; recurrent anemia ; and abnormal bleeding after surgery, dental work or childbirth. Platelet storage pool deficiencies may be genetic or acquired (non-genetic). They can also be part of an inherited genetic syndrome such as Hermansky-Pudlak syndrome, Chediak-Higashi syndrome, thrombocytopenia-absent radius (TAR) syndrome, and Wiskott-Aldrich syndrome. Treatment is symptomatic.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet storage pool deficiency","secondary_identifiers":["MEDGEN:19351","MESH:D010981","OMIM:185050","UMLS:C0032197","SCTID:234474009","DOID:2223","Orphanet:734","EFO:1001112","GARD:5034"],"synonyms":[{"name":"alpha delta granule deficiency","type":"related"},{"name":"alpha dense granule deficiency","type":"exact"},{"name":"combined alpha-delta platelet storage pool deficiency","type":"exact"},{"name":"dense body defect","type":"exact"},{"name":"platelet dense granule deficiency","type":"exact"},{"name":"platelet storage pool defect","type":"exact"},{"name":"platelet storage pool diseases","type":"related"},{"name":"storage pool platelet disease","type":"related"}],"termid":"MONDO:0008495","xrefs":{"Monarch":{"xref_id":"0008495"}}}


id: PBO:0050306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 8","termid":"PBO:0050306"}


id: GO:1900212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","GOC:mtg_kidney_jan10","PMID:17314325","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900211"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process","termid":"GO:2001054"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"down regulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"},{"name":"down-regulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"},{"name":"downregulation of mesenchymal cell apoptosis involved in metanephros development","type":"exact"},{"name":"inhibition of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"},{"name":"negative regulation of mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900212"}


id: GO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"L-methylmalonyl-CoA metabolic process","synonyms":[{"name":"L-methylmalonyl-CoA metabolism","type":"exact"}],"termid":"GO:0046491"}


id: PBO:0045824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 14","termid":"PBO:0045824"}


id: PBO:0000567
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.5","termid":"PBO:0000567"}


id: MONDO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystitis","secondary_identifiers":["ICD9:375.30","icd11.foundation:1034960983","SCTID:85777005","NCIT:C34521","MESH:D003607","DOID:9938","UMLS:C0010930","MEDGEN:3686"],"synonyms":[{"name":"Dacryoadenitides","type":"exact"},{"name":"Dacryocystitides","type":"exact"},{"name":"dacryoadenitis","type":"related"},{"name":"inflammation of lacrimal sac","type":"exact"},{"name":"lacrimal sac inflammation","type":"exact"}],"termid":"MONDO:0004926","xrefs":{"Monarch":{"xref_id":"0004926"}}}


id: PBO:0072749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A10","termid":"PBO:0072749"}


id: PBO:0026954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_monoseptate_vegetative_cell","termid":"PBO:0026954"}


id: PBO:0051689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INMT-MINDY4 readthrough (NMD candidate)","termid":"PBO:0051689"}


id: MONDO:0024250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"pityriasis lichenoides","termid":"MONDO:0024249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"acute lichenoid pityriasis","secondary_identifiers":["ICD9:696.5","SCTID:86487001","UMLS:C0162852","MEDGEN:57997"],"synonyms":[{"name":"Habermann disease","type":"related"},{"name":"Habermann's disease","type":"related"},{"name":"Habermanns disease","type":"related"},{"name":"Mucha Habermann disease","type":"related"},{"name":"Mucha-Habermann disease","type":"related"},{"name":"PLEVA","type":"related"},{"name":"disease, Habermann","type":"related"},{"name":"disease, Habermann's","type":"related"},{"name":"disease, Mucha-Habermann","type":"related"},{"name":"mucha habermann disease","type":"related"},{"name":"mucha-habermann disease","type":"related"},{"name":"mucha-habermann syndrome","type":"related"},{"name":"parapsoriasis lichenoides et varioliformis acuta","type":"related"},{"name":"parapsoriasis varioliformis acuta","type":"related"}],"termid":"MONDO:0024250","xrefs":{"Monarch":{"xref_id":"0024250"}}}


id: GO:1902989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any telomere maintenance via semi-conservative replication that is involved in meiotic cell cycle.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"meiotic telomere maintenance via semi-conservative replication","synonyms":[{"name":"equal telomere replication involved in meiotic cell cycle","type":"related"},{"name":"telomeric fork progression involved in meiotic cell cycle","type":"narrow"},{"name":"telomeric replication fork progression involved in meiotic cell cycle","type":"narrow"}],"termid":"GO:1902989"}


id: FYPO:0007546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear envelope division does not occur. Nuclear envelope division takes place at the end of mitosis; the nuclear envelope undergoes localized breakdown in the nuclear bridge midzone and the ends are sealed and retrieved into the envelopes of the separated daughter nuclei. When nuclear envelope division does not occur, the two DNA masses remain linked by the nuclear bridge, and may coalesce back into a single nucleus.","definition_xrefs":["PMID:32848252","PomBase:mah","PomBase:vw","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear envelope division","synonyms":[{"name":"abolished NE division","type":"exact"},{"name":"abolished nuclear envelope division during mitotic cell cycle","type":"related"},{"name":"abolished nuclear envelope division during vegetative growth","type":"exact"},{"name":"failed nuclear envelope division","type":"exact"},{"name":"nuclear envelope division abolished","type":"exact"}],"termid":"FYPO:0007546"}


id: PBO:0083139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data","termid":"PBO:0083139"}


id: GO:0060934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to His-Purkinje cell fates and their capacity to differentiate into His-Purkinje cells. These cells form the fibers that regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell fate commitment","termid":"GO:0060934"}


id: PBO:0039036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 13, pseudogene","termid":"PBO:0039036"}


id: MONDO:0017705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pulmonary venous return anomaly is a cardiac malformation where some or all of the pulmonary veins drain into the right atrium or the systemic veins, with or without the presence of pulmonary venous obstruction, leading to various manifestations such as fatigue, exertional dyspnea, pulmonary arterial hypertension, cyanosis and progressive congestive heart failure. The two main subtypes are congenital partial pulmonary venous return anomaly (PAPVC), where one or a few of the pulmonary veins are anomalous, and congenital total pulmonary venous return anomaly (TAPVC), where all of the pulmonary veins are anomalous.","definition_xrefs":["Orphanet:3090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital pulmonary venous return anomaly","secondary_identifiers":["MEDGEN:539577","GARD:4599","UMLS:C0265916"],"synonyms":[{"name":"APVR","type":"related"},{"name":"TAPVR","type":"related"},{"name":"TAPVR1","type":"related"},{"name":"anomalous pulmonary venous return","type":"related"},{"name":"congenital pulmonary venous connection anomaly","type":"exact"},{"name":"pulmonary venous return anomaly","type":"related"},{"name":"scimitar anomaly","type":"related"},{"name":"scimitar syndrome","type":"related"},{"name":"total anomalous pulmonary venous return","type":"related"}],"termid":"MONDO:0017705","xrefs":{"Monarch":{"xref_id":"0017705"}}}


id: PBO:0061823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 13 Y-linked","termid":"PBO:0061823"}


id: FYPO:0005663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which re-entry into the mitotic cell cycle is abnormal after arrest resulting from heat shock.","definition_xrefs":["PMID:19546237","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to heat","termid":"FYPO:0000212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal re-entry into mitotic cell cycle after arrest in response to heat shock","synonyms":[{"name":"abnormal re-entry into mitotic cell cycle after arrest in response to heat shock during vegetative growth","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after heat shock arrest","type":"exact"},{"name":"abnormal re-entry into mitotic cell cycle after heat shock-induced arrest","type":"exact"}],"termid":"FYPO:0005663"}


id: PBO:0077752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 2 membrane trafficking protein","termid":"PBO:0077752"}


id: PBO:0067430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 551, pseudogene","termid":"PBO:0067430"}


id: MOD:00515
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc(2)","definition_xrefs":["Unimod:147","PubMed:111247","PubMed:1694179","PubMed:5490222","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc2dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(1)","type":"related"},{"name":"HexNAc2dHex1","type":"related"}],"termid":"MOD:00515"}


id: PBO:0045255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 1 like 1","termid":"PBO:0045255"}


id: PBO:0083354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene MET2/YNL277W","termid":"PBO:0083354"}


id: GO:0044478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism initiates, promotes, or enhances platelet aggregation in another organism via the action of a venom.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated blood coagulation","termid":"GO:0044469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated platelet aggregation","synonyms":[{"name":"envenomation promoting platelet aggregation","type":"exact"},{"name":"envenomation resulting in positive regulation of platelet aggregation in another organism","type":"exact"},{"name":"envenomation resulting in positive regulation of platelet aggregation in other organism","type":"exact"},{"name":"venom-mediated platelet agglutination","type":"related"}],"termid":"GO:0044478"}


id: FYPO:0001336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell process phenotype that affects a transport process in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype","termid":"FYPO:0000149"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"transport phenotype during vegetative growth","synonyms":[{"name":"fission yeast transport phenotype during vegetative growth","type":"exact"},{"name":"transport phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001336"}


id: GO:1900299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of hexasaccharide transport","termid":"GO:1900297"},{"relation_name":"positively_regulates","term_name":"hexasaccharide transport","termid":"GO:2001102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of hexasaccharide transport","synonyms":[{"name":"activation of hexasaccharide transport","type":"narrow"},{"name":"up regulation of hexasaccharide transport","type":"exact"},{"name":"up-regulation of hexasaccharide transport","type":"exact"},{"name":"upregulation of hexasaccharide transport","type":"exact"}],"termid":"GO:1900299"}


id: GO:0072491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"toluene-containing compound metabolic process","termid":"GO:0072490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound catabolic process","synonyms":[{"name":"toluene and derivative catabolic process","type":"exact"},{"name":"toluene-containing compound breakdown","type":"exact"},{"name":"toluene-containing compound catabolism","type":"exact"},{"name":"toluene-containing compound degradation","type":"exact"}],"termid":"GO:0072491"}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: PATO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape having numerous very small circular rounded projections or protuberances.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"knobbled","termid":"PATO:0002427"}


id: SO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a match, for example an hsp from blast is a match_part.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"},{"relation_name":"part_of","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"match_part","synonyms":[{"name":"match part","type":"exact"}],"termid":"SO:0000039"}


id: PBO:0053311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-54 DREAM MuvB core complex component","termid":"PBO:0053311"}


id: GO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + H2O = a long-chain fatty acid + CoA + H+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:67680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"long-chain fatty acyl-CoA hydrolase activity","synonyms":[{"name":"long-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"long-chain acyl-thioester hydrolase activity","type":"related"},{"name":"long-chain hydrolase activity","type":"related"},{"name":"long-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052816"}


id: PBO:0074444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 45","termid":"PBO:0074444"}


id: MOD:00883
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a 1-carboxyl group (usually referred to as the alpha-carboxyl) with a carboxamido group.","definition_xrefs":["OMSSA:25","DeltaMass:0","Unimod:2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-amidated residue","synonyms":[{"name":"Amidated","type":"related"},{"name":"Amidation","type":"related"},{"name":"Amide formation (C terminus)","type":"exact"},{"name":"ResN","type":"exact"},{"name":"alpha-amidated residue","type":"exact"},{"name":"ctermamide","type":"exact"}],"termid":"MOD:00883"}


id: PBO:0086812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YJR115W has a paralog, ECM13, that arose from the whole genome duplication","termid":"PBO:0086812"}


id: MONDO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital smooth muscle hamartoma (CSMH) is a rare cutaneous hamartomatous lesion most often located on the lumbosacral area or proximal limbs (but rarely on atypical areas such as scalp, eyelid or foot) and characterized by a disorganized proliferation of smooth muscle fibers of arrector pili presenting usually as a localized skin-colored or hyperpigmented plaque (up to 10 cm in diameter) with prominent vellus hairs (most common classic form) or less commonly by multiple skin-colored papules that can coalesce to form irregularly shaped plaques. With time, hyperpigmentation and vellus hairs usually diminish and neither malignant transformation nor associated systemic involvement has been reported.","definition_xrefs":["Orphanet:263435"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma","secondary_identifiers":["SCTID:239144007","MEDGEN:590701","ICD9:759.6","UMLS:C0406819","GARD:20902"],"termid":"MONDO:0016986","xrefs":{"Monarch":{"xref_id":"0016986"}}}


id: PBO:0070927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 35","termid":"PBO:0070927"}


id: GO:0090182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of secretion of lysosomal enzymes, the controlled release of lysosomal enzymes by a cell.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"secretion of lysosomal enzymes","termid":"GO:0033299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of secretion of lysosomal enzymes","termid":"GO:0090182"}


id: MONDO:0011553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 4q31.","definition_xrefs":["PMID:11101839","DOID:0110484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 26","secondary_identifiers":["MEDGEN:340185","MESH:C565329","OMIM:605428","UMLS:C1854275","GARD:22599"],"synonyms":[{"name":"DFNB26","type":"narrow"},{"name":"autosomal recessive deafness 26","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 26","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 26","type":"narrow"},{"name":"deafness, autosomal recessive 26","type":"narrow"}],"termid":"MONDO:0011553","xrefs":{"Monarch":{"xref_id":"0011553"}}}


id: CHEBI:15361
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A 2-oxo monocarboxylic acid anion that is the conjugate base of pyruvic acid, arising from deprotonation of the carboxy group.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate","termid":"CHEBI:15361"}


id: GO:0031162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of exogenous sulfur into a metallo-sulfur cluster.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfur incorporation into metallo-sulfur cluster (obsolete GO:0031162)","synonyms":[{"name":"sulphur incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0031162"}


id: GO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host systemic acquired resistance (obsolete GO:0052104)","synonyms":[{"name":"activation by organism of SAR in host","type":"exact"},{"name":"activation by organism of systemic acquired resistance in host","type":"exact"},{"name":"induction by organism of SAR in host","type":"exact"},{"name":"induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of systemic acquired resistance in host","type":"exact"},{"name":"positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host systemic acquired resistance","type":"related"},{"name":"positive regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"stimulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up-regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"upregulation by symbiont of systemic acquired resistance in host","type":"related"}],"termid":"GO:0052104"}


id: GO:0035816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process where water is taken up from the collecting ducts and proximal and distal loops of the nephron, which acts to decrease the amount of urine that is excreted from the body per unit time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete renal water absorption involved in negative regulation of urine volume (obsolete GO:0035816)","termid":"GO:0035816"}


id: GO:0070083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted monoamine transport vesicle.","definition_xrefs":["GOC:mg2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted monoamine transport vesicle","termid":"GO:0070081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted monoamine transport vesicle membrane","synonyms":[{"name":"clathrin sculpted monoamine constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted monoamine transport vesicle membrane","type":"exact"}],"termid":"GO:0070083"}


id: GO:0010133
data:
  {"annotated_genes":["SJAG_02235","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70616,78374],"is_not":false,"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including glutamate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"proline catabolic process","termid":"GO:0006562"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"proline catabolic process to glutamate","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0019494","MetaCyc:PROUT-PWY"],"synonyms":[{"name":"proline breakdown to glutamate","type":"exact"},{"name":"proline degradation to glutamate","type":"exact"},{"name":"proline oxidation","type":"related"}],"termid":"GO:0010133","terms_by_termid":{"GO:0010133":null}}


id: GO:0046527
data:
  {"annotated_genes":["SJAG_04236","SJAG_05285","SJAG_01531","SJAG_00394","SJAG_03587","SJAG_00876","SJAG_01950","SJAG_03656","SJAG_03764","SJAG_02222","SJAG_04571","SJAG_00129","SJAG_01427","SJAG_01288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75060,113469,80394,76226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[93692,79304,101380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[118091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033840"},{"annotations":[116122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[80363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[69413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[77571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"},{"annotations":[67072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[79920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01950":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046527","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0033840":null,"GO:0042281":null,"GO:0042283":null,"GO:0106073":null,"GO:0140752":null}}


id: PBO:0028058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_S-phase_DNA_damage_checkpoint_during_cellular_response_to_hydroxyurea","termid":"PBO:0028058"}


id: PR:Q9UTF0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small EDRK-rich factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERF-like protein C1705.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1705.02","secondary_identifiers":["UniProtKB:Q9UTF0"],"synonyms":[{"name":"Spom972h-SERF1","type":"exact"}],"termid":"PR:Q9UTF0"}


id: PBO:0090830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane TRP-like calcium ion channel Pkd2","termid":"PBO:0090830"}


id: PBO:0087984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; two forms of protein are made by alternative translation starts; localizes to both nucleus and mitochondrion to produce modified base N2,N2-dimethylguanosine in tRNAs in both compartments; nuclear Trm1p is evenly distributed around inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body (SPB) mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon SPB","termid":"PBO:0087984"}


id: GO:0043595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A layer surrounding a bacterial endospore found inside the outer endospore membrane, but outside the membrane surrounding the endospore core. It consists of peptidoglycan of a different chemical nature than that found in vegetative cell walls which results in less cross-linking of peptidoglycan.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endospore external encapsulating structure","termid":"GO:0043591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"endospore cortex","termid":"GO:0043595"}


id: PBO:0109360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109360"}


id: PBO:0057909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3612","termid":"PBO:0057909"}


id: MONDO:1011462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, domestic cat","secondary_identifiers":["OMIA:000033-9685"],"termid":"MONDO:1011462","xrefs":{"Monarch":{"xref_id":"1011462"}}}


id: PBO:0003676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf1","termid":"PBO:0003676"}


id: PBO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY divergent transcript","termid":"PBO:0046297"}


id: GO:0072394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about a biological process or quality is received and converted into a molecular signal, contributing to a cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in cell cycle checkpoint (obsolete GO:0072394)","synonyms":[{"name":"G1/S transition checkpoint sensor mechanism","type":"related"},{"name":"G1/S transition checkpoint sensor process","type":"related"},{"name":"G2/M transition checkpoint sensor mechanism","type":"related"},{"name":"G2/M transition checkpoint sensor process","type":"related"},{"name":"cell cycle checkpoint sensor mechanism","type":"related"},{"name":"cell cycle checkpoint sensor process","type":"related"},{"name":"detection of stimulus involved in G1/S transition checkpoint","type":"related"},{"name":"detection of stimulus involved in G2/M transition checkpoint","type":"related"},{"name":"sensing involved in G1/S transition checkpoint","type":"related"},{"name":"sensing involved in G2/M transition checkpoint","type":"related"},{"name":"sensing involved in cell cycle checkpoint","type":"related"}],"termid":"GO:0072394"}


id: PBO:0079912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 2","termid":"PBO:0079912"}


id: GO:0044528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of mitochondrial mRNA molecules to degradation. Includes processes that both stabilize and destabilize mitochondrial mRNAs.","definition_xrefs":["GOC:jl","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mitochondrial mRNA stability","secondary_identifiers":["Reactome:R-HSA-9837092"],"termid":"GO:0044528"}


id: PBO:0038820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 23","termid":"PBO:0038820"}


id: PBO:0062738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 5","termid":"PBO:0062738"}


id: GO:0046800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the severity of viral infection and subsequent disease.","definition_xrefs":["PMID:10587354"],"gene_count":0,"genotype_count":0,"name":"obsolete enhancement of virulence (obsolete GO:0046800)","synonyms":[{"name":"enhancement of virulence","type":"exact"}],"termid":"GO:0046800"}


id: MONDO:0015418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lateral facial cleft (obsolete MONDO:0015418)","secondary_identifiers":["Orphanet:141269"],"synonyms":[{"name":"Tessier number 7 facial cleft","type":"exact"},{"name":"transverse facial cleft","type":"exact"}],"termid":"MONDO:0015418","xrefs":{"Monarch":{"xref_id":"0015418"}}}


id: PBO:0084298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Invertase; sucrose hydrolyzing enzyme; a secreted, glycosylated form is regulated by glucose repression, and an intracellular, nonglycosylated enzyme is produced constitutively","termid":"PBO:0084298"}


id: MONDO:0005531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Strong dependence, both physiological and emotional, upon morphine.","definition_xrefs":["MESH:D009021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opiate dependence","termid":"MONDO:0005530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"morphine dependence","secondary_identifiers":["icd11.foundation:337142707","MEDGEN:7706","SCTID:231479000","EFO:0005612","DOID:2560","UMLS:C0026552"],"termid":"MONDO:0005531","xrefs":{"Monarch":{"xref_id":"0005531"}}}


id: PATO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000986 absolute consistency (obsolete PATO:0000986)","termid":"PATO:0000986"}


id: PBO:0087576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the 26S proteasome; substrate of the N-acetyltransferase Nat1p; protein abundance increases in response to DNA replication stress","termid":"PBO:0087576"}


id: PBO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-0 (non-functional)","termid":"PBO:0051308"}


id: PBO:0084506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific serine/threonine protein kinase; functions in meiotic checkpoint, promotes recombination between homologous chromosomes by suppressing double strand break repair between sister chromatids; stabilizes Hop1-Thr318 phosphorylation to promote interhomolog recombination and checkpoint responses during meiosis","termid":"PBO:0084506"}


id: PBO:0065151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 3","termid":"PBO:0065151"}


id: PBO:0046060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit J","termid":"PBO:0046060"}


id: GO:1903190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyoxal.","definition_xrefs":["PMID:22523093","GO_REF:0000068","PMID:23651081","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"glyoxal metabolic process","termid":"GO:1903189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyoxal catabolic process","synonyms":[{"name":"glyoxal breakdown","type":"exact"},{"name":"glyoxal catabolism","type":"exact"},{"name":"glyoxal degradation","type":"exact"}],"termid":"GO:1903190"}


id: MONDO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrasomy 9p is a rare autosomal anomaly characterized by pre- and postnatal growth retardation, psychomotor delay, mild to moderate intellectual disability, hypotonia, microcephaly, dysmorphic features (ocular hypertelorism, low-set, malformed ears, bulbous/beaked nose, microretrognathia, enophthalmos/micropthalmia, epicanthus, strabismus), cleft lip/palate, skeletal abnormalities (hypoplastic nails/distal phalanges, short stature, short neck, contractures), congenital heart defects, renal and urogenital malformations (renal hypoplasia, genital hypoplasia, cryptorchidism).","definition_xrefs":["Orphanet:3310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication of the short arm of chromosome 9","termid":"MONDO:0700043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetrasomy 9p","secondary_identifiers":["MESH:C538027","NORD:964","SCTID:715530004","UMLS:C0795832","icd11.foundation:1426428869","GARD:42","MEDGEN:162876"],"synonyms":[{"name":"Chromosome 9, Tetrasomy 9p","type":"exact"},{"name":"Isochromosome 9p","type":"exact"},{"name":"Mosaic tetrasomy 9p","type":"related"},{"name":"chromosome 9p tetrasomy","type":"related"},{"name":"tetrasomy of short arm of chromosome 9","type":"related"},{"name":"tetrasomy type 9p","type":"exact"}],"termid":"MONDO:0018030","xrefs":{"Monarch":{"xref_id":"0018030"}}}


id: PBO:0013813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phophatidylinositol 3-kinase complex subunit Vps38","termid":"PBO:0013813"}


id: GO:0062195
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97612],"is_not":false,"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a microtubule bundle in a stable functional or structural state.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule bundle maintenance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062195","terms_by_termid":{"GO:0062195":null}}


id: PBO:0031827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_modification","termid":"PBO:0031827"}


id: PBO:0041233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 56","termid":"PBO:0041233"}


id: GO:1901718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of dipeptide transmembrane transport.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:1901718)","termid":"GO:1901718"}


id: MONDO:0958277
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87470],"is_not":false,"summary":null,"term":"MONDO:0958277"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 123","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620745","UMLS:C5935588","MEDGEN:1861332"],"synonyms":[{"name":"deafness, autosomal recessive 123","type":"narrow"}],"termid":"MONDO:0958277","terms_by_termid":{"MONDO:0958277":null},"xrefs":{"Monarch":{"xref_id":"0958277"}}}


id: PBO:0024477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein (Meikin) Moa1","termid":"PBO:0024477"}


id: PBO:0056461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBL associated serine protease 1","termid":"PBO:0056461"}


id: PBO:0053000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 4","termid":"PBO:0053000"}


id: GO:0120028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of osmosensory signaling pathway (obsolete GO:0120028)","termid":"GO:0120028"}


id: MONDO:0018109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fulminant viral hepatitis is a rapid and severe impairment of liver functions (acute liver failure) with hepatic encephalopathy developing less than 8 weeks after the onset of jaundice, secondary to viral hepatitis mainly due to HBV, but also to HAV.","definition_xrefs":["Orphanet:35063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"fulminant viral hepatitis","secondary_identifiers":["MEDGEN:547442","UMLS:C0276624","icd11.foundation:369649302","GARD:18812","MedDRA:10019772"],"termid":"MONDO:0018109","xrefs":{"Monarch":{"xref_id":"0018109"}}}


id: PBO:0004882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Pet191 (predicted)","termid":"PBO:0004882"}


id: PBO:0049014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPM6A divergent transcript","termid":"PBO:0049014"}


id: FYPO:0005787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing extends for a normal (i.e. indistinguishable from wild type) distance from the break site. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["GO:0000729","PMID:27729451","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal spatial extent of double-strand break processing","synonyms":[{"name":"normal spatial extent of DSB processing","type":"exact"},{"name":"normal spatial extent of double-strand break processing during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of double-strand break processing during vegetative growth","type":"exact"},{"name":"normal spatial extent of double-strand break resection","type":"exact"}],"termid":"FYPO:0005787"}


id: MONDO:0006123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well circumscribed benign tumor arising from cardiac muscle. It usually affects children and may be present in the fetus. Depending on tumor location and size, cardiac, respiratory, and hemodynamic parameters may be affected. There is an association between cardiac rhabdomyoma and tuberous sclerosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"},{"relation_name":"is_a","term_name":"rhabdomyoma","termid":"MONDO:0036688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac rhabdomyoma","secondary_identifiers":["NCIT:C6739","MEDGEN:232027","UMLS:C1332852","EFO:1000150","HP:0009729"],"synonyms":[{"name":"cardiac rhabdomyoma","type":"exact"},{"name":"cardiac rhabdomyoma (disease)","type":"exact"},{"name":"heart rhabdomyoma","type":"exact"},{"name":"rhabdomyoma of heart","type":"exact"},{"name":"rhabdomyoma of the heart","type":"exact"}],"termid":"MONDO:0006123","xrefs":{"Monarch":{"xref_id":"0006123"}}}


id: MONDO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disease characterized by cerebellar ataxia, cytopenias and predisposition to bone marrow failure and myeloid leukemia. Neurologic features variably include slowly progressive cerebellar ataxia or balance impairment with cerebellar atrophy and periventricular white matter T2 hyperintensities in brain MRI, horizontal and vertical nystagmus, dysmetria, dysarthria, pyramidal tract signs and reduced nerve conduction velocity. Hematological abnormalities are variable and may be intermittent and include cytopenias of all cell lineages, immunodeficiency, myelodysplasia and acute myeloid leukemia.","definition_xrefs":["Orphanet:2585"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of medulla oblongata (obsolete MONDO:0015141)","termid":"MONDO:0015141"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"ataxia-pancytopenia syndrome","secondary_identifiers":["MEDGEN:230896","SCTID:768556005","OMIM:159550","NCIT:C176909","GARD:3865","UMLS:C1327919","ICD10CM:D61.0","MESH:C563233"],"synonyms":[{"name":"ATXPC","type":"related"},{"name":"ataxia-pancytopenia syndrome","type":"exact"},{"name":"myelocerebellar disorder","type":"exact"}],"termid":"MONDO:0008038","xrefs":{"Monarch":{"xref_id":"0008038"}}}


id: PBO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 1","termid":"PBO:0052700"}


id: GO:1902242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of copal-8-ol diphosphate(3-).","definition_xrefs":["GOC:TermGenie","PMID:22672125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"},{"relation_name":"is_a","term_name":"copal-8-ol diphosphate(3-) metabolic process","termid":"GO:1902241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"copal-8-ol diphosphate(3-) catabolic process","synonyms":[{"name":"copal-8-ol diphosphate(3-) breakdown","type":"exact"},{"name":"copal-8-ol diphosphate(3-) catabolism","type":"exact"},{"name":"copal-8-ol diphosphate(3-) degradation","type":"exact"}],"termid":"GO:1902242"}


id: PBO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7","termid":"PBO:0046845"}


id: PBO:0062080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 11 pseudogene","termid":"PBO:0062080"}


id: PBO:0086657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; has some characteristics of a transcriptional activator; may be a target of Dbf2p-Mob1p kinase; GFP-fusion protein co-localizes with clathrin-coated vesicles; YML037C is not an essential gene","termid":"PBO:0086657"}


id: PBO:0084570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein involved in zinc ion homeostasis; member of the four-protein IZH family, expression induced by zinc deficiency; deletion reduces sensitivity to elevated zinc and shortens lag phase, overexpression reduces Zap1p activity","termid":"PBO:0084570"}


id: GO:0033338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a medial fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medial fin development","synonyms":[{"name":"median fin development","type":"exact"}],"termid":"GO:0033338"}


id: MONDO:0013702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the LINS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 27","secondary_identifiers":["GARD:22555","OMIM:614340","UMLS:C3280538","DOID:0081193","MEDGEN:482168"],"synonyms":[{"name":"LINS1 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT27","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in LINS1","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 27","type":"exact"},{"name":"intellectual disability, autosomal recessive 27","type":"exact"},{"name":"intellectual disability, autosomal recessive type 27","type":"exact"},{"name":"mental retardation, autosomal recessive 27","type":"related"},{"name":"mental retardation, autosomal recessive type 27","type":"exact"}],"termid":"MONDO:0013702","xrefs":{"Monarch":{"xref_id":"0013702"}}}


id: PBO:0069693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 972, pseudogene","termid":"PBO:0069693"}


id: GO:0051319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation (usually by mitosis or meiosis).","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"G2 phase","secondary_identifiers":["Wikipedia:G2_phase"],"termid":"GO:0051319"}


id: GO:1900525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:8056324","PMID:8614637","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1900525)","synonyms":[{"name":"activation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"activation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"activation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine formation by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900525"}


id: MONDO:0013363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mesomelic dysplasia, Kantaputra type","termid":"MONDO:0007977"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 2","termid":"MONDO:0016953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chromosome 2q31.1 duplication syndrome","secondary_identifiers":["GARD:15688","OMIM:613681","MEDGEN:462290","Orphanet:294026","UMLS:C3150940","DOID:0060458"],"synonyms":[{"name":"2q31.1 microduplication syndrome","type":"exact"},{"name":"chromosome 2q31.1 duplication syndrome","type":"exact"},{"name":"dup(2)(q31.1)","type":"exact"},{"name":"mesomelic dysplasia, 2Q31.1 Duplication-related","type":"related"},{"name":"trisomy 2q31.1","type":"exact"}],"termid":"MONDO:0013363","xrefs":{"Monarch":{"xref_id":"0013363"}}}


id: GO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0014808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"}


id: PBO:0043037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 6","termid":"PBO:0043037"}


id: GO:0045611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hemocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hemocyte differentiation","termid":"GO:0045610"},{"relation_name":"negatively_regulates","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemocyte differentiation","synonyms":[{"name":"down regulation of hemocyte differentiation","type":"exact"},{"name":"down-regulation of hemocyte differentiation","type":"exact"},{"name":"downregulation of hemocyte differentiation","type":"exact"},{"name":"inhibition of hemocyte differentiation","type":"narrow"},{"name":"negative regulation of arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0045611"}


id: MONDO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia, microcornea, and spontaneously Reabsorbed cataract","secondary_identifiers":["MESH:C566280","OMIM:106230","UMLS:C1862867","MEDGEN:350777"],"synonyms":[{"name":"aniridia, microcornea, and spontaneously Reabsorbed cataract","type":"exact"}],"termid":"MONDO:0007121","xrefs":{"Monarch":{"xref_id":"0007121"}}}


id: GO:1990115
data:
  {"annotated_genes":["SJAG_04093","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78879,118361],"is_not":false,"summary":null,"term":"GO:1990115"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase III complex.","definition_xrefs":["GOC:rb","PMID:23459708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"RNA polymerase III assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase III complex assembly","type":"exact"},{"name":"RNA Polymerase III complex assembly","type":"exact"}],"termid":"GO:1990115","terms_by_termid":{"GO:1990115":null}}


id: MOD:00974
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3'-chlorotyrosine","termid":"MOD:00974"}


id: PR:Q9UTB5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psd2 gene.","definition_xrefs":["UniProtKB:Q9UTB5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.03","synonyms":[{"name":"Spom972h-psd2","type":"exact"}],"termid":"PR:Q9UTB5"}


id: PBO:0081300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 81","termid":"PBO:0081300"}


id: GO:0002712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell mediated immunity","synonyms":[{"name":"regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"regulation of B-cell mediated immunity","type":"exact"},{"name":"regulation of B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002712"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["GOC:sp","PMID:23706739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: PBO:0029415
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_palmitoylation_during_meiosis","termid":"PBO:0029415"}


id: PBO:0041907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene C","termid":"PBO:0041907"}


id: PBO:0086652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole, while HA-tagged protein is found in the soluble fraction, suggesting cytoplasmic localization","termid":"PBO:0086652"}


id: MONDO:0006567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy in infants due to high levels of unconjugated bilirubin that are a result of Rh incompatibility between the mother and the fetus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal anemia","termid":"MONDO:0001240"},{"relation_name":"is_a","term_name":"bilirubin encephalopathy","termid":"MONDO:0018477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"kernicterus due to isoimmunization","secondary_identifiers":["SCTID:359007","ICD9:773.4","UMLS:C0270204","ICD10CM:P57.0","icd11.foundation:1111245443","MEDGEN:542597","NCIT:C101270","DOID:12043"],"synonyms":[{"name":"kernicterus - due to isoimm.","type":"exact"},{"name":"kernicterus due to isoimmunization of fetus or newborn","type":"exact"},{"name":"kernicterus due to isoimmunization of foetus or newborn","type":"exact"},{"name":"kernicterus related to isoimmunization","type":"exact"}],"termid":"MONDO:0006567","xrefs":{"Monarch":{"xref_id":"0006567"}}}


id: GO:0106034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of an assembled [2Fe-2S] cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:23615440"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by [2Fe-2S] cluster transfer (obsolete GO:0106034)","termid":"GO:0106034"}


id: FYPO:0005209
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore","synonyms":[{"name":"abnormal protein localisation to kinetochore","type":"exact"}],"termid":"FYPO:0005209"}


id: MONDO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from either increased or decreased motility in the bowel.","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease","termid":"MONDO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease secondary to altered bowel motility","synonyms":[{"name":"diarrhea secondary to altered bowel motility","type":"exact"},{"name":"diarrhoea secondary to altered bowel motility","type":"exact"},{"name":"motility-related diarrhea","type":"exact"},{"name":"motility-related diarrhoea","type":"exact"}],"termid":"MONDO:0000251","xrefs":{"Monarch":{"xref_id":"0000251"}}}


id: SO:1000122
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000122 sequence_variant_causing_polypeptide_post_translational_processing_change (obsolete SO:1000122)","synonyms":[{"name":"mutation causing polypeptide post translational processing change","type":"related"},{"name":"polypeptide post-translational processing affected","type":"exact"},{"name":"sequence variant causing polypeptide post translational processing change","type":"exact"}],"termid":"SO:1000122"}


id: MONDO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic dilatation of the right atrium (IDRA) is a rare congenital heart malformation of unknown etiology that is characterized by an extremely dilated right atrium, and that is usually asymptomatic and fortuitously discovered by echocardiography or chest radiography, and can be sometimes associated with other anomalies such as atrial arrhythmias (e.g. atrial flutter, atrial fibrillation, supraventricular tachycardia), severe tricuspid regurgitation, or atrial thrombus that could lead to potentially life-threatening thromboembolic complications.","definition_xrefs":["Orphanet:1677"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial idiopathic dilatation of the right atrium","secondary_identifiers":["GARD:18735","MEDGEN:901482","SCTID:716773002","UMLS:C4274283"],"synonyms":[{"name":"familial idiopathic dilatation of the right atrium (disease)","type":"exact"}],"termid":"MONDO:0015666","xrefs":{"Monarch":{"xref_id":"0015666"}}}


id: PBO:0030723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization_during_nitrogen_starvation","termid":"PBO:0030723"}


id: GO:0060467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of fertilization. Fertilization is the union of gametes of opposite sexes during the process of sexual reproduction to form a zygote. It involves the fusion of the gametic nuclei (karyogamy) and cytoplasm (plasmogamy).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fertilization","termid":"GO:0080154"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fertilization","termid":"GO:0060467"}


id: CHEBI:28786
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraquat dichloride","termid":"CHEBI:28786"}


id: PR:O14341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2F12.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L35, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.10","synonyms":[{"name":"Spom972h-SPBC2F12.10","type":"exact"}],"termid":"PR:O14341"}


id: PBO:0065008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 12","termid":"PBO:0065008"}


id: PBO:0091106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold subunit Apc1","termid":"PBO:0091106"}


id: FYPO:0000598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of vacuolar transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased vacuolar transport","synonyms":[{"name":"decreased vacuolar protein transport","type":"narrow"},{"name":"decreased vacuolar transport during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar transport during vegetative growth","type":"exact"},{"name":"reduced vacuolar transport","type":"exact"},{"name":"vacuolar transport: decreased","type":"related"}],"termid":"FYPO:0000598"}


id: MONDO:0013476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the CALR3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 19","secondary_identifiers":["OMIM:613875","DOID:0110325"],"synonyms":[{"name":"CALR3 hypertrophic cardiomyopathy","type":"exact"},{"name":"CMH19","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 19","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 19","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 19","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in CALR3","type":"exact"},{"name":"hypertrophic cardiomyopathy type 19","type":"exact"}],"termid":"MONDO:0013476","xrefs":{"Monarch":{"xref_id":"0013476"}}}


id: _global:capable_of_regulating
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Holds between c and p if and only if c is capable of some activity a, and a regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_agent_in_process","termid":"_global:causal_agent_in_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_regulating","secondary_identifiers":["RO:0002596"],"termid":"_global:capable_of_regulating"}


id: PBO:0004009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN component Cdc14","termid":"PBO:0004009"}


id: PBO:0055251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2678","termid":"PBO:0055251"}


id: PBO:0046030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2D","termid":"PBO:0046030"}


id: GO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"negatively_regulates","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen metabolic process","termid":"GO:0010713"}


id: FYPO:0006894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of inositol hexakisphosphate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal inositol hexakisphosphate kinase activity","termid":"FYPO:0006891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased inositol hexakisphosphate kinase activity","termid":"FYPO:0006894"}


id: MONDO:0007932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An age related macular degeneration conferred by variation in the ABCA4 gene on chromosome 1p22.","definition_xrefs":["DOID:0110015","PMID:10396622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 2","secondary_identifiers":["MESH:C562479","MEDGEN:501183","UMLS:C3495438","OMIM:153800"],"synonyms":[{"name":"ARMD2","type":"exact"},{"name":"age related macular degeneration type 2","type":"exact"},{"name":"macular Degeneration, Senile","type":"related"},{"name":"macular Degeneration, age-related, type 2","type":"exact"},{"name":"macular degeneration, age-related, 2","type":"related"},{"name":"maculopathy, age-related, 2","type":"related"}],"termid":"MONDO:0007932","xrefs":{"Monarch":{"xref_id":"0007932"}}}


id: MONDO:1012708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal disorder characterized by multiple areas of retinal degeneration that occurs in dogs due to a G(482)A missense mutation in the BEST1 gene.","definition_xrefs":["PMID:17460247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal retinopathy 2, BEST1-related, dog","secondary_identifiers":["OMIA:001553-9615"],"synonyms":[{"name":"CMR2","type":"exact"},{"name":"multifocal retinopathy 2, dog","type":"related"}],"termid":"MONDO:1012708","xrefs":{"Monarch":{"xref_id":"1012708"}}}


id: PBO:0070822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a","termid":"PBO:0070822"}


id: PBO:0073951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 2","termid":"PBO:0073951"}


id: PBO:0066744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 42","termid":"PBO:0066744"}


id: GO:0071640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"regulation of CCL3 production","type":"exact"},{"name":"regulation of MIP-1a production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071640"}


id: GO:0080151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of salicylic acid mediated signal transduction.","definition_xrefs":["PMID:20181750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of salicylic acid mediated signaling pathway","termid":"GO:2000031"},{"relation_name":"positively_regulates","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of salicylic acid mediated signaling pathway","synonyms":[{"name":"positive regulation of salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0080151"}


id: PBO:0088382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multidomain vesicle coat component Sec16","termid":"PBO:0088382"}


id: PATO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutinous","termid":"PATO:0001540"}


id: FYPO:0007824
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119679,119680],"is_not":false,"summary":null,"term":"FYPO:0007824"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which a response to quorum sensing molecules (QSMs) is decreased. The amount of QSMs may be normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal quorum sensing","termid":"FYPO:0007823"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased quorum sensing response","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"deficient in quorum sensing","type":"exact"},{"name":"quorum sensing attenuated","type":"exact"},{"name":"quorum sensing decreased","type":"exact"},{"name":"quorum sensing deficient","type":"exact"}],"termid":"FYPO:0007824","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007824":null}}


id: GO:0030569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the serine endopeptidase chymotrypsin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chymotrypsin inhibitor activity (obsolete GO:0030569)","synonyms":[{"name":"chymotrypsin inhibitor activity","type":"exact"}],"termid":"GO:0030569"}


id: PR:Q10139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- img2 gene.","definition_xrefs":["UniProtKB:Q10139","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein img2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.03","synonyms":[{"name":"Spom972h-img2","type":"exact"},{"name":"integrity of mitochondrial genome protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10139"}


id: MONDO:0000276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Powassan virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"viral encephalitis","termid":"MONDO:0006009"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Powassan encephalitis","secondary_identifiers":["MEDGEN:18601","SCTID:416707008","icd11.foundation:1674038791","ICD9:063.8","DOID:0050179","UMLS:C0032858"],"synonyms":[{"name":"Powassan virus caused disease or disorder","type":"exact"},{"name":"Powassan virus disease or disorder","type":"exact"},{"name":"Powassan virus infectious disease","type":"exact"},{"name":"encephalitis, powassan","type":"related"},{"name":"powassan encephalitis virus infection","type":"exact"}],"termid":"MONDO:0000276","xrefs":{"Monarch":{"xref_id":"0000276"}}}


id: PR:O74762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10943:SF2","OMA:SCHPO03658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.07c","secondary_identifiers":["UniProtKB:O74762"],"synonyms":[{"name":"Spom972h-PSMD1","type":"exact"}],"termid":"PR:O74762"}


id: PATO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality held by the bearer when the latter exhibits decreased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased functionality","secondary_identifiers":["PATO:0001568","PATO:0001641","PATO:0001556","PATO:0001642"],"synonyms":[{"name":"dysfunction","type":"broad"},{"name":"dysfunctional","type":"broad"},{"name":"having decreased function","type":"exact"},{"name":"impaired","type":"related"},{"name":"lacks function of type","type":"exact"},{"name":"low functionality","type":"exact"},{"name":"partial functionality","type":"exact"}],"termid":"PATO:0001624"}


id: MONDO:0030669
data:
  {"annotated_genes":["SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87608],"is_not":false,"summary":null,"term":"MONDO:0030669"}]},"cv_name":"mondo","definition":"A severe autosomal recessive developmental disorder characterized by multiple intestinal atresia apparent soon after birth. Affected infants have a distended abdomen and do not pass meconium. There is some evidence of inflammatory bowel disease. Death occurs in the first weeks of life. Some patients may also have immunodeficiency.","definition_xrefs":["OMIM:619708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PI4KA-related disorder","termid":"MONDO:1040012"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"gastrointestinal defects and immunodeficiency syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1811526","UMLS:C5676901"],"synonyms":[{"name":"GIDID2","type":"exact"},{"name":"gastrointestinal defects and immunodeficiency syndrome 2","type":"exact"},{"name":"multiple intestinal atresia with or without leukopenia","type":"exact"}],"termid":"MONDO:0030669","terms_by_termid":{"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"0030669"}}}


id: PBO:0052530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 3","termid":"PBO:0052530"}


id: GO:1990354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a SUMO protein bound to a SUMO activating enzyme complex. Activation by the E1 complex and linkage to the E2 enzyme UBE2I is required for the formation of covalent bonds between SUMO and its ultimate target proteins.","definition_xrefs":["GOC:bhm","PMID:15660128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"activated SUMO-E1 ligase complex","synonyms":[{"name":"SUMO-SAE1/2 complex","type":"narrow"}],"termid":"GO:1990354"}


id: PBO:0063963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pipecolic acid and sarcosine oxidase","termid":"PBO:0063963"}


id: PBO:0113002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminopeptidase yscII; may have role in obtaining leucine from dipeptide substrates; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; APE2 has a paralog, AAP1, that arose from the whole genome duplication","termid":"PBO:0113002"}


id: PBO:0084622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-R-sulfoxide reductase; reduces the R enantiomer of free Met-SO, in contrast to Ycl033Cp which reduces Met-R-SO in a peptide linkage; has a role in protection against oxidative stress; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0084622"}


id: MONDO:0014132
data:
  {"annotated_genes":["SJAG_02306"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86375],"is_not":false,"summary":null,"term":"MONDO:0014132"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the IBA57 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02306":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17555","OMIM:615330","UMLS:C3809165","MEDGEN:815495","Orphanet:363424","DOID:0080135"],"synonyms":[{"name":"IBA57 deficiency","type":"exact"},{"name":"IBA57 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"MMDS3","type":"related"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in IBA57","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 3","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome type 3","type":"exact"}],"termid":"MONDO:0014132","terms_by_termid":{"MONDO:0014132":null},"xrefs":{"Monarch":{"xref_id":"0014132"}}}


id: PBO:0031334
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cadmium","termid":"PBO:0031334"}


id: MONDO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of genetic neurological disorders caused by mutations in genes involved in the sodium and calcium channels in nerve cells. It is characterized by episodes of muscle paralysis in which the affected muscles become flaccid and the deep tendon reflexes disappear. Between the episodes the affected muscles usually work normally.","definition_xrefs":["NCIT:C84709"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"muscle tissue disorder","termid":"MONDO:0003939"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"periodic paralysis","termid":"MONDO:0016122"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial periodic paralysis","secondary_identifiers":["MEDGEN:18291","NANDO:1200502","UMLS:C0030443","SCTID:267607008","Orphanet:371433","MESH:D010245","GARD:21613","DOID:1029"],"synonyms":[{"name":"familial periodic paralyses","type":"related"},{"name":"familial periodic paralysis","type":"exact"},{"name":"familial periodic paralyzes","type":"related"},{"name":"genetic periodic paralysis","type":"related"},{"name":"hereditary periodic paralysis (disease)","type":"exact"},{"name":"normokalemic periodic paralyses","type":"related"},{"name":"normokalemic periodic paralysis","type":"related"},{"name":"normokalemic periodic paralyzes","type":"related"},{"name":"paralysis, familial periodic","type":"related"},{"name":"paralysis, normokalemic periodic","type":"related"},{"name":"paralyzes, normokalemic periodic","type":"related"},{"name":"periodic paralysis, familial","type":"related"},{"name":"periodic paralysis, normokalemic","type":"related"},{"name":"periodic paralyzes, familial","type":"related"},{"name":"periodic paralyzes, normokalemic","type":"related"}],"termid":"MONDO:0000995","xrefs":{"Monarch":{"xref_id":"0000995"}}}


id: GO:1901809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of capsanthin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","MetaCyc:PWY-5174","PMID:10995282","UniPathway:UPA00806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"capsanthin metabolic process","termid":"GO:1901807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"capsanthin biosynthetic process","synonyms":[{"name":"capsanthin anabolism","type":"exact"},{"name":"capsanthin biosynthesis","type":"exact"},{"name":"capsanthin formation","type":"exact"},{"name":"capsanthin synthesis","type":"exact"}],"termid":"GO:1901809"}


id: GO:0043999
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine (position 5) = CoA + histone H2A N6-acetyl-L-lysine (position 5).","definition_xrefs":["PMID:18552846","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A acetyltransferase activity","termid":"GO:0043998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016740","GO:0034212","GO:0016746"],"is_obsolete":false,"name":"histone H2AK5 acetyltransferase activity","synonyms":[{"name":"histone H2A-K5 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H2A-K5 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2A-K5 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2A-K5 specific)","type":"exact"}],"termid":"GO:0043999"}


id: GO:0060465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a pharynx from an initial condition to its mature state. The pharynx is the part of the digestive system immediately posterior to the mouth.","definition_xrefs":["GOC:dph","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pharynx development","synonyms":[{"name":"pharyngeal development","type":"related"}],"termid":"GO:0060465"}


id: GO:0051928
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"positively_regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion transport","type":"narrow"},{"name":"positive regulation of calcium transport","type":"exact"},{"name":"stimulation of calcium ion transport","type":"narrow"},{"name":"up regulation of calcium ion transport","type":"exact"},{"name":"up-regulation of calcium ion transport","type":"exact"},{"name":"upregulation of calcium ion transport","type":"exact"}],"termid":"GO:0051928","terms_by_termid":{"GO:1905665":null}}


id: MONDO:0016966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 16","termid":"MONDO:0016934"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial trisomy of the long arm of chromosome 16","secondary_identifiers":["GARD:20886","MEDGEN:1797784","Orphanet:262959","MESH:C538042","icd11.foundation:126160943","UMLS:C5566361"],"synonyms":[{"name":"16q duplication","type":"related"},{"name":"16q trisomy","type":"related"},{"name":"Duplication 16q","type":"related"},{"name":"chromosome 16q duplication","type":"related"},{"name":"partial duplication of chromosome 16q","type":"exact"},{"name":"partial duplication of the long arm of chromosome 16","type":"exact"},{"name":"partial trisomy 16q","type":"related"},{"name":"partial trisomy of chromosome 16q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome type 16","type":"exact"},{"name":"trisomy 16q","type":"related"}],"termid":"MONDO:0016966","xrefs":{"Monarch":{"xref_id":"0016966"}}}


id: MONDO:0004524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma with increased cellularity and nuclear atypia. There is no capsular or vascular invasion. The clinical course is benign.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland atypical follicular adenoma","secondary_identifiers":["NCIT:C27729","ICDO:8330/1","UMLS:C1266046","MEDGEN:224756","DOID:8292"],"synonyms":[{"name":"atypical follicular adenoma","type":"exact"},{"name":"atypical follicular adenoma (morphologic abnormality)","type":"exact"},{"name":"thyroid gland atypical follicular adenoma","type":"exact"}],"termid":"MONDO:0004524","xrefs":{"Monarch":{"xref_id":"0004524"}}}


id: GO:0072551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diferuloyl mono-(hydroxyferuloyl) spermidine + NADPH + O2 = monoferuloyl di-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072551"}


id: PBO:0051965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersectin 1","termid":"PBO:0051965"}


id: MONDO:1010107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute intermittent porphyria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease, non-human animal","termid":"MONDO:1011300"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"porphyria, non-human animal","termid":"MONDO:1011418"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute intermittent porphyria, non-human animal","secondary_identifiers":["OMIA:001493"],"termid":"MONDO:1010107","xrefs":{"Monarch":{"xref_id":"1010107"}}}


id: GO:0031515
data:
  {"annotated_genes":["SJAG_02637","SJAG_02386"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74400,75266],"is_not":false,"summary":null,"term":"GO:0031515"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 1-methyladenosine (m1A) in tRNA. In yeast, it is a heterotetramer of two subunits, Gcd10p and Gcd14p, while in bacteria and archaea it is a homotetramer.","definition_xrefs":["PMID:14739239","PMID:10779558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031515","terms_by_termid":{"GO:0031515":null}}


id: GO:0035651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AP-3 adaptor complex. The AP-3 adaptor complex is a heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).","definition_xrefs":["PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AP-3 adaptor complex binding","termid":"GO:0035651"}


id: GO:0019069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a virus capsid from its protein subunits.","definition_xrefs":["PMID:22615368","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral capsid assembly","secondary_identifiers":["VZ:1950"],"termid":"GO:0019069"}


id: FYPO:0000333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle begins later than normal. The duration of G1 phase is thus longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic G1 phase progression","termid":"FYPO:0000602"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mitotic G1/S phase transition delay","secondary_identifiers":["FYPO:0000543","FYPO:0000480","FYPO:0000396"],"synonyms":[{"name":"G1/S transition delay during mitotic cell cycle","type":"related"},{"name":"cell cycle progression through the G1/S phase transition: delayed","type":"related"},{"name":"delayed cell cycle progression through mitotic G1/S phase transition","type":"exact"},{"name":"delayed mitotic G1 phase progression","type":"related"},{"name":"increased duration of mitotic G1 phase","type":"related"},{"name":"increased duration of mitotic G1 phase during vegetative growth","type":"related"},{"name":"increased duration of mitotic G1 phase progression","type":"related"},{"name":"mitotic G1/S phase transition delay during vegetative growth","type":"exact"},{"name":"mitotic G1/S transition delay","type":"exact"},{"name":"mitotic cell cycle delay at G1/S transition","type":"exact"},{"name":"mitotic cell cycle delay in G1","type":"related"},{"name":"transient cell cycle arrest in mitotic G1 phase","type":"exact"}],"termid":"FYPO:0000333"}


id: PBO:0072552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA pseudouridine synthase D4","termid":"PBO:0072552"}


id: FYPO:0007289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-glucose 4-epimerase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal UDP-glucose 4-epimerase activity","termid":"FYPO:0007289"}


id: PBO:0116395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, mug2/mug135/meu2 family","termid":"PBO:0116395"}


id: GO:0010881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction by calcium ion signaling","termid":"GO:0010882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion","termid":"GO:0010881"}


id: MONDO:0017910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dehydrated hereditary stomatocytosis (DHS) is a rare hemolytic anemia characterized by a decreased red cell osmotic fragility due to a defect in cation permeability, resulting in red cell dehydration and mild to moderate compensated hemolysis. Pseudohyperkalemia (loss of potassium ions from red cells on storage at room temperature) is sometimes observed.","definition_xrefs":["Orphanet:3202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"dehydrated hereditary stomatocytosis","secondary_identifiers":["UMLS:C0272051","icd11.foundation:799088159","SCTID:715526002","DOID:0111575","GARD:5623","MEDGEN:124415","NANDO:2200633"],"synonyms":[{"name":"Desiccytosis hereditary","type":"related"},{"name":"hereditary xerocytosis","type":"exact"},{"name":"xerocytosis hereditary","type":"related"}],"termid":"MONDO:0017910","xrefs":{"Monarch":{"xref_id":"0017910"}}}


id: PBO:0046368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 4","termid":"PBO:0046368"}


id: GO:0090580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated DNA strand.","definition_xrefs":["GOC:pde","GOC:rb","PMID:11238902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands","termid":"GO:0090580"}


id: PBO:0027005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_DNA_during_vegetative_growth","termid":"PBO:0027005"}


id: MOD:00088
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-palmitoyl-L-threonine.","definition_xrefs":["PubMed:6642431","OMSSA:95","RESID:AA0079","Unimod:47#T","PubMed:8413602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-palmitoylated residue","termid":"MOD:00652"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"O-palmitoyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(hexadecanoyloxy)butanoic acid","type":"exact"},{"name":"L-threonine hexadecanoate ester","type":"exact"},{"name":"LIPID O-palmitoyl threonine","type":"exact"},{"name":"O-hexadecanoylated L-threonine","type":"exact"},{"name":"O-palmitoyl-L-threonine","type":"exact"},{"name":"O-palmitoylated L-threonine","type":"exact"},{"name":"O3-palmitoyl-threonine","type":"exact"},{"name":"OPamThr","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"},{"name":"palmitoylationt","type":"exact"},{"name":"threonine palmitate ester","type":"exact"}],"termid":"MOD:00088"}


id: PBO:0017764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0017764"}


id: PBO:0068963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 207, pseudogene","termid":"PBO:0068963"}


id: PBO:0045197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B8","termid":"PBO:0045197"}


id: MONDO:0400004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phrynoderma is a form of follicular hyperkeratosis seen in young children and adolescents due to nutritional deficiencies. It is clinically characterized by discrete, follicular, skin-colored papules with keratotic plugs distributed over elbows, knees, extensor extremities, and buttocks.","definition_xrefs":["doi:10.4103/2319-7250.175657","NCIT:C112827","PMID:21965845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"phrynoderma","secondary_identifiers":["icd11.foundation:1716182078","MEDGEN:83101","UMLS:C0334013"],"termid":"MONDO:0400004","xrefs":{"Monarch":{"xref_id":"0400004"}}}


id: GO:0006948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of syncytia-forming cell-cell fusion, caused by a virus.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host cell-cell fusion (obsolete GO:0006948)","secondary_identifiers":["Reactome:R-HSA-9733458"],"synonyms":[{"name":"induction by virus of cell-cell fusion in host","type":"exact"},{"name":"viral-induced cell-cell fusion","type":"exact"},{"name":"viral-induced host cell-cell fusion","type":"exact"},{"name":"viral-induced membrane fusion","type":"narrow"}],"termid":"GO:0006948"}


id: PBO:0034469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0034469"}


id: FYPO:0002679
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119487,119483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_04551":null},"genotype_count":2,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein phosphorylation","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"reduced protein phosphorylation","type":"exact"}],"termid":"FYPO:0002679","terms_by_termid":{"FYPO:0001838":null}}


id: GO:0150128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["PMID:29778524","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"negatively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-33 production","secondary_identifiers":["GO:0150131","GO:0150124"],"synonyms":[{"name":"negative regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150128"}


id: SO:0000208
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA transposable element defined as having termini with perfect, or nearly perfect short inverted repeats, generally 10 - 40 nucleotides long.","direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_inverted_repeat_element","synonyms":[{"name":"TIR element","type":"exact"},{"name":"terminal inverted repeat element","type":"exact"}],"termid":"SO:0000208"}


id: GO:0044414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the normal execution of host defense(s) by active mechanisms that normally result in the shutting down of a host pathway. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defenses","termid":"GO:0030682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host defenses","secondary_identifiers":["GO:0051833","GO:0052037","GO:0052261"],"synonyms":[{"name":"down regulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"down regulation by symbiont of host defense response","type":"exact"},{"name":"down-regulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"down-regulation by symbiont of host defense response","type":"exact"},{"name":"downregulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"downregulation by symbiont of host defense response","type":"exact"},{"name":"inhibition by organism of defense response of other organism during symbiotic interaction","type":"narrow"},{"name":"inhibition by symbiont of host defense response","type":"narrow"},{"name":"negative regulation by organism of defense response of other organism during symbiotic interaction","type":"related"},{"name":"negative regulation by organism of defense response of other organism involved in symbiotic interaction","type":"exact"},{"name":"negative regulation by symbiont of host defense response","type":"exact"},{"name":"negative regulation of host defenses","type":"exact"},{"name":"suppression of defense response of other organism","type":"exact"},{"name":"suppression of defense response of other organism involved in symbiotic interaction","type":"related"},{"name":"suppression of defenses of other organism involved in symbiotic interaction","type":"broad"},{"name":"suppression of host defense response","type":"exact"},{"name":"suppression of host defenses by symbiont","type":"exact"}],"termid":"GO:0044414"}


id: FYECO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which proline was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pro","synonyms":[{"name":"proline added","type":"exact"}],"termid":"FYECO:0000087"}


id: GO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of primitive erythrocyte differentiation. Primitive erythrocyte differentiation occurs as part of the process of primitive hemopoiesis.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"primitive erythrocyte differentiation","termid":"GO:0060319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of primitive erythrocyte differentiation","synonyms":[{"name":"regulation of primitive RBC differentiation","type":"exact"},{"name":"regulation of primitive erythropoeisis","type":"exact"},{"name":"regulation of primitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010725"}


id: MONDO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to comprehend the succession and duration of events.","definition_xrefs":["DOID:0060152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"time agnosia","secondary_identifiers":["UMLS:C0234506","MEDGEN:65882"],"termid":"MONDO:0000682","xrefs":{"Monarch":{"xref_id":"0000682"}}}


id: FYPO:0005838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal with a cluster distal to each side of the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"symmetric mitochondrial aggregation","synonyms":[{"name":"bipolar intracellular mitochondrion distribution","type":"related"},{"name":"bipolar intracellular mitochondrion localisation","type":"related"},{"name":"bipolar intracellular mitochondrion localization","type":"related"},{"name":"bipolar mitochondrial aggregation","type":"related"},{"name":"bipolar mitochondrion distribution","type":"related"},{"name":"symmetric mitochondrial aggregation during mitotic cell cycle","type":"related"},{"name":"symmetric mitochondrial aggregation during vegetative growth","type":"exact"}],"termid":"FYPO:0005838"}


id: GO:0046637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell differentiation","termid":"GO:0045580"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell differentiation","synonyms":[{"name":"regulation of alpha-beta T cell development","type":"related"},{"name":"regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046637"}


id: MONDO:0008592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricho-dento-osseous dysplasia (TDO) belongs to the ectodermal dysplasias and is characterized by curly/kinky hair at birth, enamel hypoplasia with discolouration and molar taurodontism, increased overall bone mineral density (BMD) and increased thickness of the cortical bones of the skull.","definition_xrefs":["Orphanet:3352"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tricho-dento-osseous syndrome","secondary_identifiers":["OMIM:190320","ICD9:759.89","icd11.foundation:131993435","MESH:C536549","NORD:1786","SCTID:38993008","UMLS:C0265333","MEDGEN:78555","DOID:0111565","GARD:7799"],"synonyms":[{"name":"TDO","type":"exact"},{"name":"TDO syndrome","type":"exact"},{"name":"TDO syndrome 1","type":"related"},{"name":"TRICHODENTOOSSEOUS syndrome","type":"exact"},{"name":"Tricho Dento Osseous Syndrome","type":"exact"},{"name":"Tricho-dento-osseous syndrome 1","type":"related"},{"name":"enamel hypoplasia and hypocalcification with associated strikingly curly hair","type":"related"},{"name":"kinky or curly hair, dolichocephaly, enamel hypoplasia, increased dental caries, radial dense bones, and brittle nails","type":"related"},{"name":"trichodontoosseous syndrome","type":"exact"}],"termid":"MONDO:0008592","xrefs":{"Monarch":{"xref_id":"0008592"}}}


id: GO:0060950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell differentiation","termid":"GO:0060950"}


id: PATO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000109 water sensitivity (obsolete PATO:0000109)","termid":"PATO:0000109"}


id: PBO:0064256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A4","termid":"PBO:0064256"}


id: PBO:0052845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-1","termid":"PBO:0052845"}


id: MONDO:0020670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete antithrombin deficiency type 2 (obsolete MONDO:0020670)","secondary_identifiers":["MESH:C537779"],"synonyms":[{"name":"Inherited antithrombin deficiency type II","type":"related"},{"name":"antithrombin deficiency type 2","type":"exact"},{"name":"antithrombmin III deficiency Type II","type":"related"}],"termid":"MONDO:0020670","xrefs":{"Monarch":{"xref_id":"0020670"}}}


id: _global:sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_of","termid":"_global:sequence_of"}


id: PBO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(9)(q12)","termid":"PBO:0047914"}


id: PBO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-16","termid":"PBO:0051434"}


id: MONDO:0009537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interstitial pneumonia characterized by the presence of bibasilar pulmonary interstitial infiltrates composed of lymphocytes and plasma cells. It may be associated with autoimmune and lymphoproliferative disorders. Signs and symptoms include fever, cough, and dyspnea. Symptomatic patients may require immunosuppressive treatment.","definition_xrefs":["NCIT:C27558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoid interstitial pneumonia","secondary_identifiers":["GARD:16700","ICD10CM:J84.2","MedDRA:10062997","SCTID:44274007","Orphanet:79128","UMLS:C0264511","NANDO:1200424","ICD9:516.8","icd11.foundation:1140418798","MEDGEN:82682","MESH:C562489","OMIM:247610","DOID:0050159"],"synonyms":[{"name":"LIP","type":"related"},{"name":"diffuse hyperplasia of bronchus-associated lymphoid tissue","type":"exact"},{"name":"lymphocytic interst. pneumonitis","type":"exact"},{"name":"lymphocytic interstitial pneumonia","type":"exact"},{"name":"lymphocytic interstitial pneumonitis","type":"exact"},{"name":"lymphoid interstitial pneumonia","type":"exact"}],"termid":"MONDO:0009537","xrefs":{"Monarch":{"xref_id":"0009537"}}}


id: GO:0044673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer which catalyses the reaction of 5-amino-6-(D-ribitylamino)uracil and 4-hydroxyphenylpyruvate to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO), an intermediate of coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:14593448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase complex","synonyms":[{"name":"FO-synthase complex","type":"exact"}],"termid":"GO:0044673"}


id: GO:0031224
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of the gene products having some covalently attached portion, for example part of a peptide sequence or some other covalently attached group such as a GPI anchor, which spans or is embedded in one or both leaflets of the membrane.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of membrane (obsolete GO:0031224)","synonyms":[{"name":"intrinsic to membrane","type":"narrow"}],"termid":"GO:0031224"}


id: PBO:0057577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 874","termid":"PBO:0057577"}


id: GO:0071637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of monocyte chemotactic protein-1.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"monocyte chemotactic protein-1 production","termid":"GO:0071605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of monocyte chemotactic protein-1 production","synonyms":[{"name":"regulation of CCL2 production","type":"exact"},{"name":"regulation of MCP-1 production","type":"exact"}],"termid":"GO:0071637"}


id: GO:0140483
data:
  {"annotated_genes":["SJAG_04884","SJAG_00794","SJAG_04076","SJAG_04259","SJAG_03217"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95648,102755,105803,110217,114092],"is_not":false,"summary":null,"term":"GO:0140483"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings the kinetochore and another molecule into contact, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_03217":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"kinetochore adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inner kinetochore adaptor activity","type":"narrow"},{"name":"outer kinetochore adaptor activity","type":"narrow"}],"termid":"GO:0140483","terms_by_termid":{"GO:0140483":null}}


id: MONDO:0035548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial jak1 deficiency","secondary_identifiers":["MEDGEN:1830105","ICD10CM:D84.8","Orphanet:574957","UMLS:C5680361"],"synonyms":[{"name":"Autosomal recessive MSMD due to partial JAK1 deficiency","type":"exact"}],"termid":"MONDO:0035548","xrefs":{"Monarch":{"xref_id":"0035548"}}}


id: GO:0008507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: iodide(out) + Na+(out) = iodide(in) + Na+(in).","definition_xrefs":["TC:2.A.21.5.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodide transmembrane transporter activity","termid":"GO:0015111"},{"relation_name":"is_a","term_name":"monoatomic anion:sodium symporter activity","termid":"GO:0015373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sodium:iodide symporter activity","secondary_identifiers":["Reactome:R-HSA-429591","Reactome:R-HSA-5658195"],"synonyms":[{"name":"sodium/iodide symporter activity","type":"exact"}],"termid":"GO:0008507"}


id: MONDO:0014361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autism spectrum disorder due to AUTS2 deficiency is a rare genetic syndromic intellectual disability characterized by global developmental delay and borderline to severe intellectual disability, autism spectrum disorder with obsessive behavior, stereotypies, hyperactivity but frequently friendly and affable personality, feeding difficulties, short stature, muscular hypotonia, microcephaly, characteristic dysmorphic features (hypertelorism, high arched eyebrows, ptosis, deep and/or broad nasal bridge, broad/prominent nasal tip, short and/or upturned philtrum, narrow mouth, and micrognathia), and skeletal anomalies (kyphosis and/or scoliosis, arthrogryposis, slender habitus and extremities). Other clinical features may include hernias, congenital heart defects, cryptorchidism and seizures.","definition_xrefs":["Orphanet:352490"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"autism spectrum disorder due to AUTS2 deficiency","secondary_identifiers":["DOID:0070056","MEDGEN:862872","GARD:17520","OMIM:615834","UMLS:C4014435"],"synonyms":[{"name":"ASD due to AUTS2 deficiency","type":"exact"},{"name":"AUTS2 syndrome","type":"exact"},{"name":"MRD26","type":"exact"},{"name":"autism spectrum disorder due to AUTS2 deficiency","type":"exact"},{"name":"autosomal dominant mental retardation 26","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 26","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 26","type":"exact"},{"name":"intellectual disability type 26","type":"exact"},{"name":"mental retardation, autosomal dominant 26","type":"exact"},{"name":"mental retardation, autosomal dominant type 26","type":"exact"}],"termid":"MONDO:0014361","xrefs":{"Monarch":{"xref_id":"0014361"}}}


id: PBO:0058931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIRLET7I host gene","termid":"PBO:0058931"}


id: PBO:0113529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar carboxypeptidase Y (proteinase C, CPY); broad-specificity C-terminal exopeptidase involved in non-specific protein degradation in vacuole; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; member of serine carboxypeptidase family; N-glycosylated","termid":"PBO:0113529"}


id: MONDO:0003494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually high grade squamous cell carcinoma that arises from the ovary and is not associated with a germ cell tumor. The prognosis is poor.","definition_xrefs":["NCIT:C40093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian squamous cell neoplasm","termid":"MONDO:0003495"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian squamous cell carcinoma","secondary_identifiers":["DOID:5531","UMLS:C2019443","MEDGEN:384474","EFO:1000432"],"synonyms":[{"name":"ovarian squamous cell cancer","type":"exact"},{"name":"ovarian squamous cell carcinoma","type":"exact"},{"name":"ovary squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003494","xrefs":{"Monarch":{"xref_id":"0003494"}}}


id: PR:O13621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anoctamin-10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C691.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.05c","secondary_identifiers":["UniProtKB:O13621"],"synonyms":[{"name":"Spom972h-ANO10","type":"exact"}],"termid":"PR:O13621"}


id: PBO:0048151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE and coiled-coil domain autophagy adaptor 1","termid":"PBO:0048151"}


id: MONDO:1010805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, domestic guinea pig","secondary_identifiers":["OMIA:000810-10141"],"termid":"MONDO:1010805","xrefs":{"Monarch":{"xref_id":"1010805"}}}


id: PR:O13799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mtl1 gene.","definition_xrefs":["UniProtKB:O13799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized helicase C17H9.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.02","synonyms":[{"name":"Spom972h-mtl1","type":"exact"}],"termid":"PR:O13799"}


id: GO:0008232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a heterodimer of Ecdysone receptor (EcR) and ultraspiracle (usp) bound to the ligand ecdysone, which activates transcription of target genes.","definition_xrefs":["PMID:10488333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ecdysone receptor holocomplex","termid":"GO:0008230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"activator ecdysone receptor complex","synonyms":[{"name":"activator ecdysone receptor holocomplex","type":"related"}],"termid":"GO:0008232"}


id: MONDO:0017784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epstein-Barr virus (EBV)-associated gastric carcinoma (EBVaGC) is a rare form of gastric carcinoma (seen in approximately 10% of cases) with a male predominance, characterized by a latent EBV infection in gastric carcinoma cells, diffuse-type histology, a proximal location (in the body and cardia of the stomach) and a relatively favorable prognosis.","definition_xrefs":["Orphanet:313920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated carcinoma","termid":"MONDO:0017344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"Epstein-Barr virus-associated gastric carcinoma","secondary_identifiers":["MEDGEN:896878","NCIT:C162304","SCTID:716586009","UMLS:C4274414","GARD:21362"],"synonyms":[{"name":"EBV-associated gastric carcinoma","type":"exact"},{"name":"EBVaGC","type":"exact"}],"termid":"MONDO:0017784","xrefs":{"Monarch":{"xref_id":"0017784"}}}


id: GO:0018187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of molybdenum into a protein by L-cysteinyl molybdopterin guanine dinucleotide.","definition_xrefs":["RESID:AA0281"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum incorporation via L-cysteinyl molybdopterin guanine dinucleotide (obsolete GO:0018187)","termid":"GO:0018187"}


id: PBO:0077279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 18","termid":"PBO:0077279"}


id: MONDO:0007588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Extrasystoles-short stature-hyperpigmentation-microcephaly syndrome is a rare, genetic, malformation syndrome with short stature characterized by microcephaly, borderline intellectual disability, hyperpigmentation of the skin, short stature, and ventricular extrasystoles. Cardiac syncope may also be associated. There have been no further descriptions in the literature since 1975.","definition_xrefs":["Orphanet:1964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"extrasystoles-short stature-hyperpigmentation-microcephaly syndrome","secondary_identifiers":["MESH:C565032","GARD:2213","OMIM:133750","MEDGEN:343564","UMLS:C1851412"],"synonyms":[{"name":"Char-Douglas-Dungan syndrome","type":"exact"},{"name":"extrasystoles, multiform ventricular, with short stature, hyperpigmentation and microcephaly","type":"related"}],"termid":"MONDO:0007588","xrefs":{"Monarch":{"xref_id":"0007588"}}}


id: PBO:0056518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound O-acyltransferase domain containing 7","termid":"PBO:0056518"}


id: MONDO:0012496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly characterized by developmental delay, childhood hypotonia, facial dysmorphism, and a friendly/amiable behavior.","definition_xrefs":["Orphanet:96169"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Koolen-de Vries syndrome","secondary_identifiers":["OMIM:610443","UMLS:C1864871","NORD:91169","GARD:10727","MEDGEN:355853"],"synonyms":[{"name":"17q21.31 deletion syndrome","type":"related"},{"name":"KANSL1-related intellectual disability syndrome","type":"exact"},{"name":"KDVS","type":"exact"},{"name":"KdVS","type":"exact"},{"name":"Koolen de Vries syndrome","type":"exact"},{"name":"Koolen-DE Vries syndrome","type":"related"},{"name":"Koolen-De Vries syndrome","type":"exact"},{"name":"chromosome 17Q21.31 deletion syndrome","type":"related"},{"name":"chromosome 17q21.31 deletion syndrome","type":"exact"},{"name":"chromosome 17q21.31 microdeletion syndrome","type":"related"},{"name":"microdeletion 17Q21.31 syndrome","type":"related"},{"name":"microdeletion 17q21.31 syndrome","type":"exact"}],"termid":"MONDO:0012496","xrefs":{"Monarch":{"xref_id":"0012496"}}}


id: PBO:0006177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_sequence_feature","termid":"PBO:0006177"}


id: GO:0042989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The selective interaction of actin monomers with specific molecules that inhibit their polymerization by preventing their access to other monomers.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sequestering of actin monomers (obsolete GO:0042989)","synonyms":[{"name":"actin monomer retention","type":"exact"},{"name":"actin monomer sequestering","type":"exact"},{"name":"actin monomer sequestration","type":"exact"},{"name":"actin monomer storage","type":"exact"},{"name":"retention of actin monomers","type":"exact"},{"name":"sequestration of actin monomers","type":"exact"},{"name":"storage of actin monomers","type":"exact"}],"termid":"GO:0042989"}


id: PBO:0056590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MyoD family inhibitor domain containing","termid":"PBO:0056590"}


id: PBO:0062413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 41 pseudogene","termid":"PBO:0062413"}


id: PBO:0048739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 1","termid":"PBO:0048739"}


id: PBO:0075907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8SIA6 antisense RNA 1","termid":"PBO:0075907"}


id: PR:O14136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal membrane protein PEX13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR19332:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein pex13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.10","secondary_identifiers":["UniProtKB:O14136"],"synonyms":[{"name":"SPAC3C7.10","type":"related"},{"name":"Spom972h-PEX13","type":"exact"},{"name":"peroxin-13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14136"}


id: PBO:0113127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); cooperates with Duo1p and Pse1p to connect the DASH complex with the microtubules (MT); couples kinetochores to the force produced by MT depolymerization, thereby aiding in chromosome segregation; N-terminal staple region is important for self-assembly of the Dam1 complex higher order ring structure that forms around microtubules; Ipl1p target for regulating kinetochore-MT attachments","termid":"PBO:0113127"}


id: PBO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 11","termid":"PBO:0047660"}


id: SO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial SSU rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_rRNA_gene","termid":"SO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_SSU_rRNA_gene","synonyms":[{"name":"mitochondrial small subunit rRNA gene","type":"exact"}],"termid":"SO:0002365"}


id: GO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a protozoan is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to protozoan","termid":"GO:0001562"},{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of protozoan","synonyms":[{"name":"detection of protozoa","type":"exact"},{"name":"detection of protozoon","type":"exact"},{"name":"perception of protozoa","type":"related"}],"termid":"GO:0001563"}


id: GO:0098568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the mycolate outer membrane that faces the environment and any proteins embedded in it or loosely bound to its surface.","definition_xrefs":["PMID:18567661","PMID:18316738","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external side of cell outer membrane","termid":"GO:0031240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"external side of mycolate outer membrane","termid":"GO:0098568"}


id: GO:0102496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A5 + O2 + 2-oxoglutarate = gibberellin A6 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GA5 2,3 epoxidase activity (obsolete GO:0102496)","termid":"GO:0102496"}


id: PBO:0077021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioesterase superfamily member 4","termid":"PBO:0077021"}


id: PBO:0083297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; open reading frame overlaps the verified gene VMA4/YOR332W","termid":"PBO:0083297"}


id: PBO:0076841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric repeat binding factor 2","termid":"PBO:0076841"}


id: MONDO:0000864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myopathy (obsolete MONDO:0000864)","termid":"MONDO:0000864","xrefs":{"Monarch":{"xref_id":"0000864"}}}


id: PBO:0069751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1034, pseudogene","termid":"PBO:0069751"}


id: PBO:0090709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 family Ran GEF","termid":"PBO:0090709"}


id: MONDO:0002698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A testicular mixed germ cell-sex cord-stromal tumor. It is usually associated with mixed gonadal dysgenesis and ambiguous genitalia. It is characterized by the presence of nests of large neoplastic germ cells and immature cells that resemble Sertoli cells.","definition_xrefs":["NCIT:C39911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"},{"relation_name":"is_a","term_name":"gonadoblastoma","termid":"MONDO:0010768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular gonadoblastoma","secondary_identifiers":["MEDGEN:272839","UMLS:C1515283","HP:0000030","DOID:3579"],"synonyms":[{"name":"gonadoblastoma of testis","type":"exact"},{"name":"testicular gonadoblastoma","type":"exact"},{"name":"testicular gonadoblastoma (disease)","type":"exact"},{"name":"testis gonadoblastoma","type":"exact"}],"termid":"MONDO:0002698","xrefs":{"Monarch":{"xref_id":"0002698"}}}


id: FYPO:0005921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005921"}


id: PBO:0048331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 42","termid":"PBO:0048331"}


id: FYPO:0000920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal aconitate hydratase activity","synonyms":[{"name":"abnormal aconitase activity","type":"exact"}],"termid":"FYPO:0000920"}


id: PBO:0074328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4","termid":"PBO:0074328"}


id: PBO:0025546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-56 Par1","termid":"PBO:0025546"}


id: PBO:0057331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520f","termid":"PBO:0057331"}


id: PBO:0031141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation","termid":"PBO:0031141"}


id: PBO:0045042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 2","termid":"PBO:0045042"}


id: GO:0090121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disassembly into constituent parts of the low-density lipoprotein particle in the lysosome that contributes to cholesterol transport.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"},{"relation_name":"part_of","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly involved in cholesterol transport","termid":"GO:0090121"}


id: PATO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000355 enzyme composition value (obsolete PATO:0000355)","termid":"PATO:0000355"}


id: FYPO:0004092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the horsetail-astral microtubule array is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004266"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule during meiosis","termid":"FYPO:0006130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to horsetail-astral microtubule array","synonyms":[{"name":"abolished protein localisation to horsetail-astral microtubule array","type":"exact"},{"name":"protein localization to horsetail-astral microtubule array abolished","type":"exact"}],"termid":"FYPO:0004092"}


id: PBO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATPase inhibitor (predicted)","termid":"PBO:0005837"}


id: PBO:0056656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 23","termid":"PBO:0056656"}


id: PBO:0090878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Zip1","termid":"PBO:0090878"}


id: PBO:0018243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein","termid":"PBO:0018243"}


id: MONDO:0957874
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86682],"is_not":false,"summary":null,"term":"MONDO:0957874"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081428","MEDGEN:1850177","OMIM:620402","UMLS:C5882672"],"termid":"MONDO:0957874","terms_by_termid":{"MONDO:0957874":null},"xrefs":{"Monarch":{"xref_id":"0957874"}}}


id: PBO:0076287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symplekin scaffold protein","termid":"PBO:0076287"}


id: GO:1905472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K79 dimethylation.","definition_xrefs":["PMID:27541139","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K79 dimethylation (obsolete GO:1905472)","synonyms":[{"name":"down regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"down regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"down regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"down-regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"down-regulation of histone H3-K79 dimethylation","type":"exact"},{"name":"down-regulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"downregulation of histone H3 K79 dimethylation","type":"exact"},{"name":"downregulation of histone H3-K79 dimethylation","type":"exact"},{"name":"downregulation of histone lysine H3 K79 dimethylation","type":"exact"},{"name":"inhibition of histone H3 K79 dimethylation","type":"narrow"},{"name":"inhibition of histone H3-K79 dimethylation","type":"narrow"},{"name":"inhibition of histone lysine H3 K79 dimethylation","type":"narrow"},{"name":"negative regulation of histone H3 K79 dimethylation","type":"exact"},{"name":"negative regulation of histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:1905472"}


id: PBO:0057369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ak","termid":"PBO:0057369"}


id: PBO:0059279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L37 pseudogene 1","termid":"PBO:0059279"}


id: GO:0102139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate + H2O = H+ + anthranilate + (2E)-2-hydroxypenta-2,4-dienoate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2'-aminophenyl)-hexa-2,4dienoate hydrolase activity (obsolete GO:0102139)","termid":"GO:0102139"}


id: PBO:0086082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt3p, can instead interact with Pmt2p in some conditions; target for new antifungals","termid":"PBO:0086082"}


id: PBO:0116598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFNG regulatory antisense RNA 1","termid":"PBO:0116598"}


id: PBO:0046785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eyes shut homolog","termid":"PBO:0046785"}


id: PBO:0109368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 4B","termid":"PBO:0109368"}


id: MONDO:0020023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete respiratory or mediastinal malformation (obsolete MONDO:0020023)","secondary_identifiers":["Orphanet:98045"],"termid":"MONDO:0020023","xrefs":{"Monarch":{"xref_id":"0020023"}}}


id: MONDO:0018215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paraneoplastic syndrome that involves the nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic neurologic syndrome","secondary_identifiers":["ICD9:331.89","MedDRA:10072106","SCTID:192877007","UMLS:C0751911","MEDGEN:155656","GARD:7326","Orphanet:36388"],"synonyms":[{"name":"PCD","type":"exact"},{"name":"PNS","type":"exact"},{"name":"nervous system paraneoplastic syndrome","type":"exact"},{"name":"paraneoplastic cerebellar degeneration","type":"narrow"},{"name":"paraneoplastic syndrome of nervous system","type":"exact"}],"termid":"MONDO:0018215","xrefs":{"Monarch":{"xref_id":"0018215"}}}


id: PBO:0031073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_pheromone","termid":"PBO:0031073"}


id: PBO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during S phase","termid":"PBO:0003088"}


id: SO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA with a plus 1 frameshift.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"plus_1_frameshift","termid":"SO:0000868"},{"relation_name":"is_a","term_name":"mRNA_with_frameshift","termid":"SO:0000108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_with_plus_1_frameshift","synonyms":[{"name":"mRNA with plus 1 frameshift","type":"exact"}],"termid":"SO:0000321"}


id: GO:0042269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immunity","termid":"GO:0002715"},{"relation_name":"regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"regulation of NK cell mediated cell death","type":"exact"},{"name":"regulation of NK cell mediated cell killing","type":"exact"},{"name":"regulation of NK cell mediated cytolysis","type":"related"},{"name":"regulation of NK cell mediated cytotoxicity","type":"related"},{"name":"regulation of natural killer cell mediated cell death","type":"exact"},{"name":"regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"regulation of natural killer cell mediated cytolysis","type":"related"},{"name":"regulation of natural killer-cell mediated cytolysis","type":"related"}],"termid":"GO:0042269"}


id: PBO:0013442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosomal protein Rsm22 fusion protein","termid":"PBO:0013442"}


id: RO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_endoparasite","termid":"RO:0002635"}


id: GO:0003896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the synthesis of a short RNA primer on a DNA template, providing a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.","definition_xrefs":["PMID:26184436","GOC:mah","GOC:mcc","PMID:11395402","PMID:38203225","PMID:38492718"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA primase activity (obsolete GO:0003896)","termid":"GO:0003896"}


id: MONDO:0010396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the CDKL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile spasms","termid":"MONDO:0018097"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"atypical Rett syndrome","termid":"MONDO:0017746"},{"relation_name":"is_a","term_name":"CDKL5 disorder","termid":"MONDO:0100039"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 2","secondary_identifiers":["UMLS:C4750718","MESH:C564064","MEDGEN:1663579","OMIM:300672","Orphanet:505652","GARD:18617","DOID:0080467"],"synonyms":[{"name":"CDKL5 early infantile epileptic encephalopathy","type":"exact"},{"name":"DEE2","type":"exact"},{"name":"EIEE2","type":"exact"},{"name":"developmental and epileptic encephalopathy 2, X-linked dominant","type":"exact"},{"name":"developmental and epileptic encephalopathy, 2","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in CDKL5","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 2","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 2","type":"exact"},{"name":"infantile spasm syndrome, X-linked 2","type":"related"}],"termid":"MONDO:0010396","xrefs":{"Monarch":{"xref_id":"0010396"}}}


id: MONDO:0007820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fused manidbular incisors is an extremely rare dental anomaly that is characterized by the union of two, normally separated, incisor tooth germs of the primary dentition. It is frequently associated with hypodontia and an increased risk of pulp exposure.","definition_xrefs":["Orphanet:2287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fused mandibular incisors","secondary_identifiers":["SCTID:707796002","icd11.foundation:1109888650","GARD:2419","MEDGEN:488128","UMLS:C3494175","OMIM:147251"],"synonyms":[{"name":"'Double Tooth'","type":"related"},{"name":"Double tooth","type":"related"},{"name":"incisors, FUSED mandibular","type":"related"}],"termid":"MONDO:0007820","xrefs":{"Monarch":{"xref_id":"0007820"}}}


id: GO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["PMID:19193861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose-6-phosphate","synonyms":[{"name":"response to trehalose-6-phosphate stimulus","type":"exact"}],"termid":"GO:0080094"}


id: PBO:0085099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear pore protein; involved in nuclear export of pre-tRNA and in re-export of mature tRNAs after their retrograde import from the cytoplasm; deletion mutation extends replicative lifespan, as does exclusion of Los1p from the nucleus in response to caloric restriction","termid":"PBO:0085099"}


id: RO:0002615
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of is-model-of","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_model","termid":"RO:0002615"}


id: GO:0010242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O = O2 + 4 H+ + 4 e-. The evolution of oxygen from oxidizing water is carried out by the oxygen evolving complex in photosystem II of plants. P680+, the photochemically oxidized reaction-center chlorophyll of PSII, is a strong biological oxidant. The reduction potential of P680+ is more positive than that of water, and thus it can oxidize water to give O2 and H+ ions. The oxygen escapes as a gas while the H+ ions remain in solution inside the thylakoid vesicle.","definition_xrefs":["GOC:syr","PMID:17091926","PMID:7948862","GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxygen evolving activity","secondary_identifiers":["RHEA:36359","EC:1.10.3.9","MetaCyc:PSII-RXN"],"synonyms":[{"name":"photosynthetic water oxidation","type":"exact"}],"termid":"GO:0010242"}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: PBO:0042831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 4, pseudogene","termid":"PBO:0042831"}


id: GO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 6 metabotropic glutamate receptor binding","synonyms":[{"name":"type 6 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031803"}


id: PBO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086072"}


id: PBO:0027656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027656"}


id: PBO:0064153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKP4 antisense RNA 1","termid":"PBO:0064153"}


id: GO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.6","RHEA:10012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(R)-6-hydroxynicotine oxidase activity","secondary_identifiers":["KEGG_REACTION:R07170","UM-BBD_reactionID:r0477","MetaCyc:R-6-HYDROXYNICOTINE-OXIDASE-RXN"],"synonyms":[{"name":"(R)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-D-nicotine oxidase activity","type":"exact"},{"name":"D-6-hydroxynicotine oxidase activity","type":"related"}],"termid":"GO:0018530"}


id: MONDO:0026768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete warfarin sensitivity, X-linked (obsolete MONDO:0026768)","secondary_identifiers":["OMIM:301052","DOID:0080839"],"synonyms":[{"name":"Coumarin Sensitivity, X-Linked","type":"related"},{"name":"WARFARIN SENSITIVITY, X-LINKED","type":"related"},{"name":"Warfarin sensitivity","type":"exact"}],"termid":"MONDO:0026768","xrefs":{"Monarch":{"xref_id":"0026768"}}}


id: PR:Q09858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nnf1 gene.","definition_xrefs":["UniProtKB:Q09858","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nnf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.04","synonyms":[{"name":"NMS complex subunit nnf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nnf1","type":"exact"}],"termid":"PR:Q09858"}


id: GO:0030017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The repeating unit of a myofibril in a muscle cell, composed of an array of overlapping thick and thin filaments between two adjacent Z discs.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"myofibril","termid":"GO:0030016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"sarcomere","secondary_identifiers":["Wikipedia:Sarcomere"],"termid":"GO:0030017"}


id: MONDO:1012403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"contractural arachnodactyly, non-human animal","termid":"MONDO:1011800"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractural arachnodactyly, cattle","secondary_identifiers":["OMIA:001511-9913"],"synonyms":[{"name":"Fawn calf syndrome","type":"exact"}],"termid":"MONDO:1012403","xrefs":{"Monarch":{"xref_id":"1012403"}}}


id: GO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The membrane organization process that joins two lipid bilayers to form a single membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane fusion (obsolete GO:0044800)","termid":"GO:0044800"}


id: MONDO:0012150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 2","secondary_identifiers":["OMIM:608904","MEDGEN:323086","UMLS:C1837152"],"synonyms":[{"name":"ADHD2","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 2","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0012150","xrefs":{"Monarch":{"xref_id":"0012150"}}}


id: PBO:0059984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 4","termid":"PBO:0059984"}


id: GO:2000612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"regulation of TSH secretion","type":"exact"},{"name":"regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000612"}


id: MONDO:0004029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ureter small cell carcinoma (obsolete MONDO:0004029)","termid":"MONDO:0004029","xrefs":{"Monarch":{"xref_id":"0004029"}}}


id: GO:0008834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,6E)-farnesyl diphosphate + 8 isopentenyl diphosphate = di-trans,octa-cis-undecaprenyl diphosphate + 8 diphosphate.","definition_xrefs":["RHEA:27551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity","termid":"GO:0045547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"ditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] activity","secondary_identifiers":["EC:2.5.1.31","MetaCyc:RXN-8999"],"synonyms":[{"name":"UPP synthetase activity","type":"related"},{"name":"bactoprenyl-diphosphate synthase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenyl-diphosphate:isopentenyl-diphosphate undecaprenylcistransferase activity","type":"related"},{"name":"di-trans,poly-cis-decaprenylcistransferase activity","type":"exact"},{"name":"di-trans,poly-cis-undecaprenyl-diphosphate synthase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthase activity","type":"exact"},{"name":"undecaprenyl diphosphate synthetase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthase activity","type":"related"},{"name":"undecaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"undecaprenyl-diphosphate synthase activity","type":"related"}],"termid":"GO:0008834"}


id: FYPO:0007385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a longer time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah","PMID:28366743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein-protein interaction","synonyms":[{"name":"increased duration of protein binding","type":"exact"}],"termid":"FYPO:0007385"}


id: GO:0042471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the ear are generated and organized. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic organ morphogenesis","termid":"GO:0048562"},{"relation_name":"is_a","term_name":"sensory organ morphogenesis","termid":"GO:0090596"},{"relation_name":"part_of","term_name":"ear development","termid":"GO:0043583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ear morphogenesis","synonyms":[{"name":"hearing organ morphogenesis","type":"exact"}],"termid":"GO:0042471"}


id: PBO:0082429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blocked reading frame, contains two in-frame stops in translation; this ORF is conserved, without the stops, in Saccharomyces paradoxus, S. mikatae, and S. bayanus; RNA sequencing data indicate the presence of a transcription unit at this reading frame","termid":"PBO:0082429"}


id: PBO:0077414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 150B","termid":"PBO:0077414"}


id: GO:1904738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a vascular associated smooth muscle cell from one site to another.","definition_xrefs":["PMID:20693317","GOC:TermGenie","GOC:rph","GOC:BHF_miRNA","GOC:BHF","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell migration","synonyms":[{"name":"vascular smooth muscle cell migration","type":"exact"}],"termid":"GO:1904738"}


id: FYPO:0002289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"abolished protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0002289"}


id: MONDO:0968980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 12","secondary_identifiers":["OMIM:620792","MEDGEN:1856162","UMLS:C5935610"],"termid":"MONDO:0968980","xrefs":{"Monarch":{"xref_id":"0968980"}}}


id: PR:O94281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ckb2 gene.","definition_xrefs":["UniProtKB:O94281","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase II subunit beta-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.02c","synonyms":[{"name":"CK II beta-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ckb2","type":"exact"}],"termid":"PR:O94281"}


id: MONDO:0032726
data:
  {"annotated_genes":["SJAG_04862"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86488],"is_not":false,"summary":null,"term":"MONDO:0032726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 39","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618397","MEDGEN:1683958","GARD:17999","Orphanet:565624","UMLS:C5193075","DOID:0111475"],"synonyms":[{"name":"COMBINED OXIDATIVE PHOSPHORYLATION DEFICIENCY 39","type":"related"},{"name":"COXPD39","type":"related"}],"termid":"MONDO:0032726","terms_by_termid":{"MONDO:0032726":null},"xrefs":{"Monarch":{"xref_id":"0032726"}}}


id: GO:0097753
data:
  {"annotated_genes":["SJAG_03795","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119499,119505],"is_not":false,"summary":null,"term":"GO:0097753"}]},"cv_name":"biological_process","definition":"A membrane organization process resulting in the bending of a membrane.","definition_xrefs":["Wikipedia:Membrane_curvature","GOC:krc","GOC:pr","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01848":null,"SJAG_03795":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane bending","references_by_uniquename":{"PMID:33495454":null},"synonyms":[{"name":"membrane curvature","type":"related"}],"termid":"GO:0097753","terms_by_termid":{"GO:0097753":null}}


id: MOD:01525
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"},{"relation_name":"is_a","term_name":"mTRAQ reporter fragment","termid":"MOD:01870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01525"}


id: PBO:0049566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 2","termid":"PBO:0049566"}


id: MONDO:0005332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005332 (obsolete MONDO:0005332)","termid":"MONDO:0005332","xrefs":{"Monarch":{"xref_id":"0005332"}}}


id: GO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase IV promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase IV transcription repressor complex","termid":"GO:0090573"}


