# terms

id: PBO:0028546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_during_cellular_response_to_osmotic_stress","termid":"PBO:0028546"}


id: GO:0061762
data:
  {"annotated_genes":["SJAG_03802","SJAG_03486","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116441,116777,118526],"is_not":false,"summary":null,"term":"GO:0061762"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which calmodulin-dependent protein kinase activity enabled by a CAMKK directly activates an AMPK. The cascade begins with calmodulin binding calcium which in turn binds CAMKK enabling its calmodulin-dependent protein kinase activity. The cascade ends with AMP-activated protein kinase activity.","definition_xrefs":["PMID:23010169","PMID:24709372","GOC:pad","GOC:PARL","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"CAMKK-AMPK signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:0061762","terms_by_termid":{"GO:0061762":null}}


id: PBO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates cfh4","termid":"PBO:0001960"}


id: GO:0061161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the establishment of bipolar cell polarity that regulates the shape of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of bipolar cell polarity regulating cell shape","termid":"GO:0061160"},{"relation_name":"is_a","term_name":"positive regulation of establishment of bipolar cell polarity","termid":"GO:0061173"},{"relation_name":"is_a","term_name":"positive regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:2000247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"positive regulation of establishment of bipolar cell polarity regulating cell shape","termid":"GO:0061161"}


id: GO:0046330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAPK cascade","termid":"GO:0043410"},{"relation_name":"is_a","term_name":"regulation of JNK cascade","termid":"GO:0046328"},{"relation_name":"positively_regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of JNK cascade","synonyms":[{"name":"activation of JNK cascade","type":"narrow"},{"name":"stimulation of JNK cascade","type":"narrow"},{"name":"up regulation of JNK cascade","type":"exact"},{"name":"up-regulation of JNK cascade","type":"exact"},{"name":"upregulation of JNK cascade","type":"exact"}],"termid":"GO:0046330"}


id: PBO:0066462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 5","termid":"PBO:0066462"}


id: GO:0032375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sterol transport","termid":"GO:0032372"},{"relation_name":"is_a","term_name":"regulation of cholesterol transport","termid":"GO:0032374"},{"relation_name":"negatively_regulates","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholesterol transport","synonyms":[{"name":"down regulation of cholesterol transport","type":"exact"},{"name":"down-regulation of cholesterol transport","type":"exact"},{"name":"downregulation of cholesterol transport","type":"exact"},{"name":"inhibition of cholesterol transport","type":"narrow"}],"termid":"GO:0032375"}


id: GO:0051345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrolase activity, the catalysis of the hydrolysis of various bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hydrolase activity","synonyms":[{"name":"activation of hydrolase activity","type":"narrow"},{"name":"hydrolase activator","type":"exact"},{"name":"stimulation of hydrolase activity","type":"narrow"},{"name":"up regulation of hydrolase activity","type":"exact"},{"name":"up-regulation of hydrolase activity","type":"exact"},{"name":"upregulation of hydrolase activity","type":"exact"}],"termid":"GO:0051345"}


id: MONDO:1011647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic valvular disease, non-human animal","secondary_identifiers":["OMIA:001246"],"termid":"MONDO:1011647","xrefs":{"Monarch":{"xref_id":"1011647"}}}


id: GO:0006125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete thioredoxin pathway (obsolete GO:0006125)","synonyms":[{"name":"thioredoxin pathway","type":"exact"},{"name":"thioredoxin reduction","type":"narrow"}],"termid":"GO:0006125"}


id: PBO:0084402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysine methyltransferase; involved in the monomethylation of eEF1A (Tef1p/Tef2p); SET-domain family member; predicted involvement in ribosome biogenesis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0084402"}


id: PBO:0056611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 3","termid":"PBO:0056611"}


id: PR:O74385
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.10","synonyms":[{"name":"Spom972h-elp6","type":"exact"}],"termid":"PR:O74385"}


id: MONDO:1010859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lysosomal storage disease that occurs in kangaroo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disease, kangaroo","secondary_identifiers":["OMIA:000616-9322"],"termid":"MONDO:1010859","xrefs":{"Monarch":{"xref_id":"1010859"}}}


id: PATO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Polar polarity is a quality that inheres in a molecular entity when the molecular entity is polar, i.e. does possess an electric dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polarity","termid":"PATO:0002186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polar polarity","termid":"PATO:0002187"}


id: GO:0016607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.","definition_xrefs":["PMID:28977640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"nuclear speck","synonyms":[{"name":"nuclear speckle","type":"exact"},{"name":"nuclear speckles","type":"exact"},{"name":"speckle domain","type":"narrow"},{"name":"speckle focus","type":"related"},{"name":"splicing speckle","type":"exact"}],"termid":"GO:0016607"}


id: FYECO:0000389
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with sulfate ions as the sulfur source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, sulfate sulfur source","synonyms":[{"name":"glucose MM, sulphate sulphur source","type":"exact"},{"name":"glucose minimal medium, sulfate sulfur source","type":"exact"},{"name":"glucose minimal medium, sulphate sulphur source","type":"exact"}],"termid":"FYECO:0000389"}


id: PBO:0081406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 253","termid":"PBO:0081406"}


id: GO:0016211
data:
  {"annotated_genes":["SJAG_00359","SJAG_01845"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61403,71694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004356"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of ammonia (NH3) to another substance via a carbon-nitrogen bond with concomitant breakage of a diphosphate linkage, usually in a nucleoside triphosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-ammonia (or amide) ligase activity","termid":"GO:0016880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_01845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ammonia ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0016211","terms_by_termid":{"GO:0004356":null}}


id: MONDO:0010476
data:
  {"annotated_genes":["SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87272],"is_not":false,"summary":null,"term":"MONDO:0010476"}]},"cv_name":"mondo","definition":"Beta-propeller protein-associated neurodegeneration (BPAN), also known as static encephalopathy of childhood with neurodegeneration in adulthood, is a rare form of neurodegeneration with brain iron accumulation (NBIA) characterized by early-onset developmental delay and further neurological deterioration in early adulthood.","definition_xrefs":["Orphanet:329284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"neurodegeneration with brain iron accumulation 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300894","GARD:12570","SCTID:732959007","UMLS:C3550973","MEDGEN:763887","NCIT:C175210","DOID:0110739"],"synonyms":[{"name":"BPAN","type":"exact"},{"name":"NBIA5","type":"exact"},{"name":"SENDA","type":"exact"},{"name":"WDR45 neurodegeneration with brain iron accumulation","type":"exact"},{"name":"beta-propeller protein-associated neurodegeneration","type":"exact"},{"name":"neurodegeneration with brain iron accululation 5","type":"related"},{"name":"neurodegeneration with brain iron accumulation 5","type":"exact"},{"name":"neurodegeneration with brain iron accumulation 5, X-linked dominant","type":"exact"},{"name":"neurodegeneration with brain iron accumulation caused by mutation in WDR45","type":"exact"},{"name":"neurodegeneration with brain iron accumulation type 5","type":"exact"},{"name":"static encephalopathy Of childhood with neurodegeneration In adulthood","type":"exact"},{"name":"static encephalopathy of childhood with neurdegeneration in adulthood","type":"exact"},{"name":"static encephalopathy of childhood with neurodegeneration in adulthood","type":"related"}],"termid":"MONDO:0010476","terms_by_termid":{"MONDO:0010476":null},"xrefs":{"Monarch":{"xref_id":"0010476"}}}


id: PBO:0061947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily X member 5 pseudogene","termid":"PBO:0061947"}


id: PBO:0071135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 137","termid":"PBO:0071135"}


id: MONDO:0004431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bleeding into the joints. It may arise from trauma or spontaneously in patients with hemophilia.","definition_xrefs":["MESH:D006395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemarthrosis","secondary_identifiers":["EFO:1001344","SCTID:81808003","DOID:801","ICD9:719.18","UMLS:C0018924","ICD9:719.1","ICD9:719.10","MEDGEN:5479"],"synonyms":[{"name":"haemarthrosis of shoulder joint","type":"narrow"},{"name":"haemarthrosis of the ankle and foot","type":"narrow"},{"name":"haemarthrosis of the pelvic region and thigh","type":"narrow"},{"name":"hemarthrosis involving ankle and foot","type":"narrow"},{"name":"hemarthrosis involving forearm","type":"narrow"},{"name":"hemarthrosis involving hand","type":"narrow"},{"name":"hemarthrosis involving lower leg","type":"narrow"},{"name":"hemarthrosis involving pelvic region and thigh","type":"narrow"},{"name":"hemarthrosis involving shoulder region","type":"narrow"},{"name":"hemarthrosis involving upper arm","type":"narrow"},{"name":"hemarthrosis of ankle and/or foot","type":"exact"},{"name":"hemarthrosis of forearm","type":"narrow"},{"name":"hemarthrosis of hand","type":"narrow"},{"name":"hemarthrosis of lower leg","type":"narrow"},{"name":"hemarthrosis of shoulder","type":"narrow"},{"name":"hemarthrosis of shoulder region","type":"exact"},{"name":"hemarthrosis of the ankle and foot","type":"narrow"},{"name":"hemarthrosis of the ankle and/or foot","type":"exact"},{"name":"hemarthrosis of the forearm","type":"narrow"},{"name":"hemarthrosis of the hand","type":"narrow"},{"name":"hemarthrosis of the lower leg","type":"narrow"},{"name":"hemarthrosis of the pelvic region and thigh","type":"narrow"},{"name":"hemarthrosis of the shoulder region","type":"exact"},{"name":"hemarthrosis of the upper arm","type":"narrow"},{"name":"hemarthrosis of upper arm","type":"narrow"}],"termid":"MONDO:0004431","xrefs":{"Monarch":{"xref_id":"0004431"}}}


id: PBO:0030988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nucleosome_positioning_in_euchromatin","termid":"PBO:0030988"}


id: GO:0050000
data:
  {"annotated_genes":["SJAG_02814","SJAG_01263","SJAG_02837","SJAG_03543","SJAG_07002","SJAG_01278","SJAG_02761","SJAG_01745","SJAG_00646","SJAG_03217","SJAG_01805","SJAG_00930","SJAG_01297","SJAG_04884","SJAG_02045","SJAG_01371","SJAG_04508","SJAG_01067","SJAG_02336","SJAG_04412","SJAG_05290","SJAG_03540","SJAG_04280","SJAG_02451","SJAG_00794","SJAG_01613","SJAG_05019","SJAG_00768","SJAG_03220","SJAG_05226","SJAG_05295","SJAG_04076","SJAG_01082","SJAG_01538","SJAG_04142","SJAG_02731","SJAG_02299","SJAG_03327","SJAG_04140","SJAG_01777","SJAG_00678","SJAG_03449","SJAG_05260","SJAG_03437","SJAG_03126","SJAG_01837","SJAG_04623","SJAG_05196","SJAG_03680","SJAG_03092","SJAG_03048","SJAG_03698","SJAG_04040","SJAG_02698","SJAG_00727","SJAG_01224","SJAG_03683","SJAG_03926","SJAG_05319","SJAG_00302","SJAG_03989","SJAG_03685","SJAG_00335","SJAG_02346","SJAG_00918","SJAG_03299","SJAG_02624","SJAG_04259","SJAG_03287","SJAG_01584","SJAG_01601","SJAG_00082","SJAG_02286","SJAG_05220","SJAG_05266","SJAG_01211","SJAG_00207","SJAG_00756","SJAG_03103","SJAG_02737","SJAG_01775","SJAG_01370","SJAG_04745","SJAG_00418"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88209,94170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[110625,91723,116823,90381,110670,88344,98232,105798,72433,76158,95892,73187,88096,118443,111992,91332,118957,100701],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[89415,91680,94940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140698"},{"annotations":[112265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098653"},{"annotations":[117239,91681,89932,110273,103133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[76293,79692,97047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990683"},{"annotations":[108133,90625,115838,117358,101655,98946,114086,88153,94134],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[116965],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0120110"},{"annotations":[108568],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[64705,90103],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[87742,100247,90104,105426,103134],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[118960,99547,118446,116224,94137,95646,102752,100703,109454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[97048,116244,117995,117859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[114291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[110215,95108],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0099606"},{"annotations":[104212,108571,100705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007079"},{"annotations":[94535,99554,104213,108572,98948],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1990942"},{"annotations":[98950,89702,90086,114400,91320,103860,110201,108573,89482,102753,112925,112926,100844,113535,104214,112927,107817,114801,94172,99449,109199,94536,117213,118989,78346],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[117166,90105,99451,76450,105427],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0044820"},{"annotations":[102678],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[102687],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904537"},{"annotations":[116309,112268,105502],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[102698,90341,94146,111511,116976],"is_not":false,"rel_names":["regulates","part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[116979],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[109456],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[89484,107819,95647,105801,110628,91322,95893,116226,94151,101659,113536,98954,102754,114402,98233,117215,108137,109457,100846,110203,110671,109201,90088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"},{"annotations":[117245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"},{"annotations":[103918,91687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140464"},{"annotations":[75817,73539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034398"}]},"cv_name":"biological_process","definition":"Any process in which a chromosome is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle 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id: GO:0051071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:ai","PMID:15173185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"4,6-pyruvylated galactose residue metabolic process","synonyms":[{"name":"4,6-pyruvylated galactose residue metabolism","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 metabolic process","type":"exact"},{"name":"4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-1,3 metabolism","type":"exact"},{"name":"PvGal metabolic process","type":"exact"},{"name":"PvGal metabolism","type":"exact"}],"termid":"GO:0051071"}


id: GO:0047829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-nopaline + NADP+ + H2O = L-arginine + 2-oxoglutarate + NADPH + H+.","definition_xrefs":["RHEA:19637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-nopaline dehydrogenase activity","secondary_identifiers":["MetaCyc:D-NOPALINE-DEHYDROGENASE-RXN","EC:1.5.1.19"],"synonyms":[{"name":"2-N-(D-1,3-dicarboxypropyl)-L-arginine:NADP+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"D-nopaline synthase activity","type":"related"},{"name":"N2-(D-1,3-dicarboxypropyl)-L-arginine:NADP+ oxidoreductase (L-arginine-forming)","type":"related"},{"name":"NOS activity","type":"related"},{"name":"nopaline dehydrogenase activity","type":"related"},{"name":"nopaline synthase activity","type":"related"}],"termid":"GO:0047829"}


id: PBO:0027333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_level_during_cellular_response_to_menadione","termid":"PBO:0027333"}


id: PBO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein Igo1 (predicted)","termid":"PBO:0000860"}


id: GO:0160009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-(2E)-butenoyl-L-lysyl-[histone] = (2E)-2-butenoate + L-lysyl-[histone].","definition_xrefs":["PMID:28497810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"},{"relation_name":"is_a","term_name":"protein decrotonylase activity","termid":"GO:0160008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"histone decrotonylase activity","termid":"GO:0160009"}


id: PBO:0013061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, isoleucine biosynthesis protein (predicted)","termid":"PBO:0013061"}


id: MONDO:0013418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 7","secondary_identifiers":["OMIM:613780","MEDGEN:462427","UMLS:C3151077","GARD:15706"],"synonyms":[{"name":"AAT7","type":"related"},{"name":"aortic aneurysm, familial thoracic 7","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 7","type":"exact"},{"name":"aortic dissection, familial, with or without aortic aneurysm","type":"related"}],"termid":"MONDO:0013418","xrefs":{"Monarch":{"xref_id":"0013418"}}}


id: GO:0016270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stepwise addition of carbohydrate or carbohydrate derivative residues to the initially added O-linked residue (usually GalNAc) to form the core 4 O-glycan structure, GlcNAc-beta-(1->6)[GalNAc-beta-(1->3)]-GalNAc.","definition_xrefs":["GOC:mah","GOC:pr","PMID:10580130"],"gene_count":0,"genotype_count":0,"name":"obsolete O-glycan processing, core 4 (obsolete GO:0016270)","termid":"GO:0016270"}


id: PBO:0052901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-12","termid":"PBO:0052901"}


id: PBO:0015653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-level_fluctuates_during","termid":"PBO:0015653"}


id: GO:0035604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which activates or increases the frequency, rate or extent of cell proliferation in the bone marrow.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"positive regulation of cell proliferation in bone marrow","termid":"GO:0071864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow","synonyms":[{"name":"FGF receptor signaling pathway involved in positive regulation of cell proliferation in bone marrow","type":"exact"},{"name":"FGFR signaling pathway involved in positive regulation of cell proliferation in bone marrow","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in positive regulation of cell proliferation in bone marrow","type":"exact"}],"termid":"GO:0035604"}


id: GO:0052761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [beta-(1->4)-D-glucosamine]n-[N-acetyl-D-glucosamine]m = D-glucosamine + [beta-(1->4)-D-glucosamine](n-1)-[N-acetyl-D-glucosamine]m. This reaction is the hydrolysis of chitosan or chitosan oligosaccharides to remove a D-glucosamine residue from the non-reducing termini; chitosan is a linear polysaccharide composed of randomly distributed beta-(1->4)-linked D-glucosamine and N-acetyl-D-glucosamine units.","definition_xrefs":["MetaCyc:3.2.1.165-RXN","EC:3.2.1.165","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"exo-1,4-beta-D-glucosaminidase activity","secondary_identifiers":["KEGG_REACTION:R08715"],"synonyms":[{"name":"chitosan exo-1,4-beta-D-glucosaminidase activity","type":"exact"},{"name":"chitosan glucosaminohydrolase activity","type":"exact"},{"name":"exo-beta-D-glucosaminidase activity","type":"related"},{"name":"exochitosanase activity","type":"related"}],"termid":"GO:0052761"}


id: SO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a long, intervening non-coding RNA.","definition_xrefs":["PMID:23463798","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA_gene","synonyms":[{"name":"lincRNA gene","type":"exact"}],"termid":"SO:0001641"}


id: GO:0140023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amine group from an adenosine to produce inosine within a tRNA molecule.","definition_xrefs":["PMID:27974624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA adenosine deamination to inosine","synonyms":[{"name":"A-to-I tRNA editing","type":"exact"}],"termid":"GO:0140023"}


id: PBO:0005826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyradoxal family membrane transporter (predicted)","termid":"PBO:0005826"}


id: PBO:0024866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex SMC P-loop ATPase subunit Smc6","termid":"PBO:0024866"}


id: PBO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transporter (predicted)","termid":"PBO:0001286"}


id: MONDO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal motor neuropathy (MMN) is a rare acquired immune-mediatedneuropathy characterized clinically by a purely motor deficit with conduction block and asymmetric multifocal weakness, fasciculations, and cramping.","definition_xrefs":["Orphanet:641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired peripheral neuropathy","termid":"MONDO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"multifocal motor neuropathy","secondary_identifiers":["GARD:11011","NORD:1952","ICD9:357.89","MEDGEN:581615","UMLS:C0393847","NANDO:1200031","ICD10CM:G61.82","SCTID:230591002"],"synonyms":[{"name":"MMN","type":"exact"},{"name":"MMNCB","type":"exact"},{"name":"multifocal motor neuropathy with conduction block","type":"exact"}],"termid":"MONDO:0018979","xrefs":{"Monarch":{"xref_id":"0018979"}}}


id: PBO:0078466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-4","termid":"PBO:0078466"}


id: MONDO:0005735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dracunculiasis (obsolete MONDO:0005735)","termid":"MONDO:0005735","xrefs":{"Monarch":{"xref_id":"0005735"}}}


id: PBO:0087882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; binds promoter sequences of cyclin genes, CYS3, and SMF2; not expressed during log phase of growth, but induced by stress or starvation during mitosis, and late in meiosis; represses 15% of all yeast genes as cells transition to quiescence; important for maintaining G1 arrest and for longevity of quiescent cells; member of Swi4p/Mbp1p family; phosphorylated by Cdc28p; relative distribution to nucleus increases upon DNA replication stress","termid":"PBO:0087882"}


id: PBO:0045827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 17","termid":"PBO:0045827"}


id: GO:0045170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A germline specific spherical organelle, rich in membrane skeletal proteins. Precursor to the fusome.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"spectrosome","termid":"GO:0045170"}


id: MONDO:1011267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy that occurs in black-footed cats due to a mutation in the IQCB1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, IQCB1-related, black-footed cat","secondary_identifiers":["OMIA:001675-61379"],"synonyms":[{"name":"retinal atrophy - cone-rod dystrophy 2, black-footed cat","type":"related"}],"termid":"MONDO:1011267","xrefs":{"Monarch":{"xref_id":"1011267"}}}


id: GO:0048387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"down regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"down-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"downregulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"inhibition of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"negative regulation of RAR signaling pathway","type":"exact"},{"name":"negative regulation of RAR signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048387"}


id: PBO:0050175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 31","termid":"PBO:0050175"}


id: PBO:0073714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 1 pseudogene 1","termid":"PBO:0073714"}


id: MONDO:0045043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the broad ligament of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligament disorder","termid":"MONDO:0045044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of uterine broad ligament","secondary_identifiers":["MEDGEN:589074","SCTID:237062006","UMLS:C0404479"],"synonyms":[{"name":"broad ligament of uterus disease","type":"exact"},{"name":"broad ligament of uterus disease or disorder","type":"exact"},{"name":"disease of broad ligament of uterus","type":"exact"},{"name":"disease or disorder of broad ligament of uterus","type":"exact"},{"name":"disorder of broad ligament","type":"exact"},{"name":"disorder of broad ligament of uterus","type":"exact"}],"termid":"MONDO:0045043","xrefs":{"Monarch":{"xref_id":"0045043"}}}


id: FYPO:0000594
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of transposition is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased transposition","synonyms":[{"name":"increased transposable element transposition","type":"exact"},{"name":"increased transposition during mitotic cell cycle","type":"related"},{"name":"increased transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: increased","type":"related"}],"termid":"FYPO:0000594"}


id: PBO:0074872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 55","termid":"PBO:0074872"}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: GO:0018130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heterocycle biosynthetic process (obsolete GO:0018130)","termid":"GO:0018130"}


id: MONDO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paralytic poliomyelitis in which the site of paralysis is the bulbospinal tract.","direct_ancestors":[{"relation_name":"is_a","term_name":"paralytic poliomyelitis","termid":"MONDO:0000341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"bulbospinal polio","secondary_identifiers":["DOID:0050514"],"termid":"MONDO:0000340","xrefs":{"Monarch":{"xref_id":"0000340"}}}


id: PBO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds d(GTT)n","termid":"PBO:0002499"}


id: GO:0030863
data:
  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id: PBO:0048777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase 2","termid":"PBO:0048777"}


id: PBO:0043667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10A","termid":"PBO:0043667"}


id: MONDO:0015149
data:
  {"annotated_genes":["SJAG_04506","SJAG_04292","SJAG_05289","SJAG_04325","SJAG_01848","SJAG_00199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011489"},{"annotations":[85536,85534,85535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012256"},{"annotations":[87111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012928"},{"annotations":[85981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014282"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_01848":null,"SJAG_04292":null,"SJAG_04325":null,"SJAG_04506":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"pure hereditary spastic paraplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0393555","GARD:19822","SCTID:230260007","NANDO:1200053","MEDGEN:581445","Orphanet:102012"],"synonyms":[{"name":"Pure HSP","type":"exact"},{"name":"Pure SPG","type":"exact"},{"name":"Pure familial spastic paraplegia","type":"exact"},{"name":"uncomplicated HSP","type":"exact"},{"name":"uncomplicated SPG","type":"exact"},{"name":"uncomplicated familial spastic paraplegia","type":"exact"},{"name":"uncomplicated hereditary spastic paraplegia","type":"exact"}],"termid":"MONDO:0015149","terms_by_termid":{"MONDO:0011489":null,"MONDO:0012256":null,"MONDO:0012928":null,"MONDO:0014282":null},"xrefs":{"Monarch":{"xref_id":"0015149"}}}


id: PBO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-64 (pseudogene)","termid":"PBO:0051474"}


id: GO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from diapause","termid":"GO:0071981"}


id: GO:0050993
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylallyl diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"dimethylallyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"DPP metabolic process","type":"exact"},{"name":"DPP metabolism","type":"exact"},{"name":"dimethylallyl diphosphate metabolism","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolic process","type":"exact"},{"name":"dimethylallyl pyrophosphate metabolism","type":"exact"}],"termid":"GO:0050993","terms_by_termid":{"GO:0050992":null}}


id: GO:0047519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-quinate + pyrroloquinoline-quinone = (-)-3-dehydroquinate + pyrroloquinoline-quinol.","definition_xrefs":["RHEA:23672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"quinate dehydrogenase (quinone) activity","secondary_identifiers":["EC:1.1.5.8","KEGG_REACTION:R01873","MetaCyc:1.1.99.25-RXN"],"synonyms":[{"name":"NAD(P)-independent quinate dehydrogenase activity","type":"related"},{"name":"quinate:pyrroloquinoline-quinone 5-oxidoreductase activity","type":"related"},{"name":"quinate:quinone 3-oxidoreductase activity","type":"exact"}],"termid":"GO:0047519"}


id: PBO:0031086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-translation_regulation_phenotype","termid":"PBO:0031086"}


id: GO:0031349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a defense response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response","synonyms":[{"name":"activation of defense response","type":"narrow"},{"name":"stimulation of defense response","type":"narrow"},{"name":"up regulation of defense response","type":"exact"},{"name":"up-regulation of defense response","type":"exact"},{"name":"upregulation of defense response","type":"exact"}],"termid":"GO:0031349"}


id: MONDO:0859214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Marbach-Schaaf neurodevelopmental syndrome","secondary_identifiers":["OMIM:619680","MEDGEN:1794260","UMLS:C5562050"],"termid":"MONDO:0859214","xrefs":{"Monarch":{"xref_id":"0859214"}}}


id: MONDO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete defective interfering particle induction, control of (obsolete MONDO:0044226)","secondary_identifiers":["HGNC:12678"],"synonyms":[{"name":"Dipi, control of","type":"related"},{"name":"defective interfering particle induction, control OF","type":"related"},{"name":"homologous viral interference","type":"related"},{"name":"vesicular stomatitis Virus defective interfering particle repressor","type":"related"}],"termid":"MONDO:0044226","xrefs":{"Monarch":{"xref_id":"0044226"}}}


id: GO:1903522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood circulation.","definition_xrefs":["PMID:10659969","GOC:TermGenie","GO_REF:0000058","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood circulation","synonyms":[{"name":"regulation of hemolymph circulation","type":"related"}],"termid":"GO:1903522"}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: PBO:0044229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 3","termid":"PBO:0044229"}


id: PBO:0048907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member B","termid":"PBO:0048907"}


id: MONDO:0000447
data:
  {"annotated_genes":["SJAG_01950","SJAG_03535","SJAG_00175"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[85458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"}]},"cv_name":"mondo","definition":"An autosomal dominant inherited condition characterized by many cysts of various sizes scattered throughout the liver.","definition_xrefs":["GARD:0009457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_01950":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"autosomal dominant polycystic liver disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:423904268","MedDRA:10010427","ICD9:751.62","ICD10CM:Q44.6","GARD:9457","OMIMPS:174050","SCTID:72925005","HP:0006557","MedDRA:10048834","MEDGEN:56388","MedDRA:10083939","UMLS:C0158683","icd11.foundation:1361740083","NCIT:C82833","DOID:0050770","Orphanet:2924"],"synonyms":[{"name":"polycystic liver disease","type":"exact"},{"name":"AD polycystic liver disease","type":"exact"},{"name":"ADPLD","type":"exact"},{"name":"PCLD","type":"exact"},{"name":"congenital cystic liver disease","type":"related"},{"name":"congenital hepatic cyst","type":"related"},{"name":"fibrocystic liver disease","type":"related"},{"name":"isolated congenital polycystic liver disease","type":"exact"},{"name":"isolated polycystic liver disease","type":"exact"}],"termid":"MONDO:0000447","terms_by_termid":{"MONDO:0008265":null,"MONDO:0014860":null,"MONDO:0054743":null},"xrefs":{"Monarch":{"xref_id":"0000447"}}}


id: PBO:0028174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-strand_break_repair_during_vegetative_growth","termid":"PBO:0028174"}


id: PBO:0042398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codanin 1","termid":"PBO:0042398"}


id: PBO:0065119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C substrate 80K-H","termid":"PBO:0065119"}


id: MONDO:0018923
data:
  {"annotated_genes":["SJAG_02317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","definition":"22q11.2 deletion syndrome (DS) is a chromosomal anomaly which causes a congenital malformation disorder whose common features include cardiac defects, palatal anomalies, facial dysmorphism, developmental delay and immune deficiency.","definition_xrefs":["Orphanet:567"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic anorectal malformation (obsolete MONDO:0015246)","termid":"MONDO:0015246"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"chromosome 22q deletion","termid":"MONDO:0022760"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"22q11.2 deletion syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1868156761","MedDRA:10066430","NANDO:1200339","NANDO:2200712","DECIPHER:16","GARD:10299","NANDO:1200688","MedDRA:10012979"],"synonyms":[{"name":"22q11DS","type":"exact"},{"name":"Cayler cardiofacial syndrome","type":"exact"},{"name":"DiGeorge sequence","type":"narrow"},{"name":"DiGeorge syndrome","type":"narrow"},{"name":"Sedlackova syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"exact"},{"name":"Takao syndrome","type":"exact"},{"name":"VCFS","type":"related"},{"name":"catch 22","type":"exact"},{"name":"conotruncal anomaly face syndrome","type":"exact"},{"name":"microdeletion 22q11.2","type":"exact"},{"name":"monosomy 22q11","type":"exact"},{"name":"velocardiofacial syndrome","type":"related"}],"termid":"MONDO:0018923","terms_by_termid":{"MONDO:0008644":null},"xrefs":{"Monarch":{"xref_id":"0018923"}}}


id: PBO:0018070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly protien Sdh8 (predicted)","termid":"PBO:0018070"}


id: GO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.","definition_xrefs":["GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system process","secondary_identifiers":["Wikipedia:Immune_system"],"termid":"GO:0002376"}


id: PBO:0040237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 7","termid":"PBO:0040237"}


id: PATO:0001763
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"female fertility","termid":"PATO:0000277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female semi-sterile","termid":"PATO:0001763"}


id: GO:0002561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a basophil.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"part_of","term_name":"basophil activation involved in immune response","termid":"GO:0002276"},{"relation_name":"part_of","term_name":"basophil mediated immunity","termid":"GO:0002560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"basophil degranulation","termid":"GO:0002561"}


id: PBO:0049166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 8","termid":"PBO:0049166"}


id: GO:0102856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-sn-glycerol-3-phosphocholine + O2 + a reduced electron acceptor = 1-18:3-2-18:2-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-sn-glycerol-3-phosphocholine desaturase activity (obsolete GO:0102856)","termid":"GO:0102856"}


id: MONDO:0001967
data:
  {"annotated_genes":["SJAG_03051","SJAG_03077","SJAG_04950","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","definition":"A congenital disorder characterized by the presence of extremely hypoplastic gonads preventing the development of secondary sex characteristics.","definition_xrefs":["NCIT:C61420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism","termid":"MONDO:0002146"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03051":null,"SJAG_03077":null,"SJAG_04148":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:205681004","ICD9:758.6","UMLS:C0018051","DOID:14447","MEDGEN:9075","MESH:D006059","GARD:2538"],"synonyms":[{"name":"gonadal dysgenesis syndrome","type":"exact"}],"termid":"MONDO:0001967","terms_by_termid":{"MONDO:0013689":null,"MONDO:0030736":null,"MONDO:0054850":null,"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"0001967"}}}


id: FYPO:0003117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of reactive oxygen species (ROS) measured in a cell is higher than normal during a cellular response to plumbagin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular reactive oxygen species level during vegetative growth","termid":"FYPO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular reactive oxygen species level during cellular response to plumbagin","synonyms":[{"name":"increased ROS accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular ROS accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular ROS level during cellular response to plumbagin","type":"exact"},{"name":"increased cellular reactive oxygen species accumulation during cellular response to plumbagin","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to plumbagin during mitotic cell cycle","type":"related"},{"name":"increased cellular reactive oxygen species level during cellular response to plumbagin during vegetative growth","type":"exact"}],"termid":"FYPO:0003117"}


id: GO:0033692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of polysaccharides, polymers of many (typically more than 10) monosaccharide residues linked glycosidically, occurring at the level of an individual cell.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular polysaccharide biosynthetic process (obsolete GO:0033692)","synonyms":[{"name":"cellular glycan biosynthesis","type":"exact"},{"name":"cellular glycan biosynthetic process","type":"exact"},{"name":"cellular polysaccharide anabolism","type":"exact"},{"name":"cellular polysaccharide biosynthesis","type":"exact"},{"name":"cellular polysaccharide formation","type":"exact"},{"name":"cellular polysaccharide synthesis","type":"exact"}],"termid":"GO:0033692"}


id: PR:Q9Y7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C569.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.04","synonyms":[{"name":"Spom972h-SPCC569.04","type":"exact"}],"termid":"PR:Q9Y7S3"}


id: PBO:0017695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor","termid":"PBO:0017695"}


id: PBO:0041349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 85","termid":"PBO:0041349"}


id: PBO:0083264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 5% of ORF overlaps the verified gene IMP1","termid":"PBO:0083264"}


id: MONDO:0007246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcific aortic disease with immunologic abnormalities, familial","secondary_identifiers":["OMIM:114065","MEDGEN:354631","UMLS:C1861974","MESH:C566182"],"synonyms":[{"name":"calcific aortic disease with immunologic abnormalities, familial","type":"exact"}],"termid":"MONDO:0007246","xrefs":{"Monarch":{"xref_id":"0007246"}}}


id: MONDO:0008398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salivary substance, Clostridium botulinum type","secondary_identifiers":["MEDGEN:356679","UMLS:C1867056","OMIM:180950"],"synonyms":[{"name":"salivary substance, Clostridium botulinum type","type":"exact"}],"termid":"MONDO:0008398","xrefs":{"Monarch":{"xref_id":"0008398"}}}


id: GO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response resulting in cell death or dysfunction mediated by activation of the classical complement pathway or induction of effector cell phagocytosis, cytolysis mechanisms via complement or Fc receptors following the binding of antibodies to cell surface antigens on a target cell, or mediated by the direct binding of antibody to cellular receptors.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type II hypersensitivity","secondary_identifiers":["Wikipedia:Type_II_hypersensitivity"],"termid":"GO:0002445"}


id: PBO:0064940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAC1 small nuclear protein","termid":"PBO:0064940"}


id: PBO:0061901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid receptor kappa 1","termid":"PBO:0061901"}


id: MONDO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising in the central nervous system. It is characterized by the presence of primitive, large malignant germ cells and lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"germinoma","secondary_identifiers":["ONCOTREE:GMN","HP:0100620","ICDO:9064/3","NCIT:C3753","MEDGEN:64626","DOID:3304","UMLS:C0206660","MESH:D018237"],"synonyms":[{"name":"germinoma","type":"exact"},{"name":"germinoma (disease)","type":"exact"}],"termid":"MONDO:0002598","xrefs":{"Monarch":{"xref_id":"0002598"}}}


id: PBO:0027022
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_punctate_nuclear_protein_localization","termid":"PBO:0027022"}


id: GO:0010592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellipodium assembly","termid":"GO:0010591"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"positive regulation of lamellipodium organization","termid":"GO:1902745"},{"relation_name":"positively_regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of lamellipodium assembly","synonyms":[{"name":"positive regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010592"}


id: MONDO:1011547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctionalis epidermolysis bullosa that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, cattle","termid":"MONDO:1010751"},{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctionalis epidermolysis bullosa, cattle","secondary_identifiers":["OMIA:000342-9913"],"termid":"MONDO:1011547","xrefs":{"Monarch":{"xref_id":"1011547"}}}


id: GO:0097153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0097153)","secondary_identifiers":["Reactome:R-HSA-6800797"],"synonyms":[{"name":"caspase activity","type":"broad"},{"name":"metacaspase activity","type":"narrow"}],"termid":"GO:0097153"}


id: GO:0043463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"rhamnose catabolic process","termid":"GO:0019301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of rhamnose catabolic process","synonyms":[{"name":"regulation of rhamnose breakdown","type":"exact"},{"name":"regulation of rhamnose catabolism","type":"exact"},{"name":"regulation of rhamnose degradation","type":"exact"}],"termid":"GO:0043463"}


id: PBO:0004088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein","termid":"PBO:0004088"}


id: MONDO:0043172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pfeiffer rockelein syndrome","secondary_identifiers":["UMLS:C2931656","MESH:C537890","MEDGEN:419465"],"synonyms":[{"name":"asymmetrical coronal synostosis, cutaneous syndactyly of fingers and toes, and jejunal atresia","type":"related"}],"termid":"MONDO:0043172","xrefs":{"Monarch":{"xref_id":"0043172"}}}


id: MONDO:0015569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nasal pyriform aperture stenosis with holoprosencephaly","secondary_identifiers":["MEDGEN:1747766","Orphanet:162521","UMLS:C5437790"],"synonyms":[{"name":"apertura pyriformis with holoprosencephaly","type":"exact"}],"termid":"MONDO:0015569","xrefs":{"Monarch":{"xref_id":"0015569"}}}


id: MONDO:0100151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the CTNS gene, encoding cystinosin. It is a sub-type of cystinosis, in which accumulation of cystine in the kidney results in renal dysfunction.","definition_xrefs":["NCIT:C129932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"cystinosis","termid":"MONDO:0016239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0006025"],"is_obsolete":false,"name":"nephropathic cystinosis","secondary_identifiers":["MEDGEN:419735","NANDO:2201234","UMLS:C2931187","NANDO:1200162","OMIM:219800","MESH:C535335","GARD:10074","icd11.foundation:810546659"],"synonyms":[{"name":"Abderhalden Kaufmann Lignac syndrome","type":"exact"},{"name":"Abderhalden Lignac Kaufmann disease","type":"exact"},{"name":"Abderhalden-Kaufmann-Lignac syndrome","type":"exact"},{"name":"Abderhalden-Lignac-Kaufmann disease","type":"exact"},{"name":"CTNS","type":"exact"},{"name":"cystinosis, atypical nephropathic","type":"exact"},{"name":"cystinosis, nephropathic","type":"exact"}],"termid":"MONDO:0100151","xrefs":{"Monarch":{"xref_id":"0100151"}}}


id: PBO:0005788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf24","termid":"PBO:0005788"}


id: PBO:0030098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_vegetative_growth","termid":"PBO:0030098"}


id: MONDO:0012481
data:
  {"annotated_genes":["SJAG_04865","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85426,85427],"is_not":false,"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","definition":"Mevalonic aciduria (MVA) is a rare, very severe form of mevalonate kinase deficiency (MKD) characterized by dysmorphic features, failure to thrive, psychomotor delay, ocular involvement, hypotonia, progressive ataxia, myopathy, and recurrent inflammatory episodes.","definition_xrefs":["Orphanet:29"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisomal disease","termid":"MONDO:0019053"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"mevalonate kinase deficiency","termid":"MONDO:0017708"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"mevalonic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200866","DOID:0050452","NCIT:C84890","MedDRA:10072219","SCTID:718558008","OMIM:610377","GARD:3588","icd11.foundation:572875152","UMLS:C1959626","MEDGEN:368373"],"synonyms":[{"name":"HIDS","type":"exact"},{"name":"MEVA","type":"related"},{"name":"MKD","type":"exact"},{"name":"MVA","type":"exact"},{"name":"Mevalonicaciduria","type":"related"},{"name":"complete mevalonate kinase deficiency","type":"exact"},{"name":"hyperimmunoglobulin D with periodic fever syndrome","type":"exact"},{"name":"mevalonic aciduria","type":"exact"}],"termid":"MONDO:0012481","terms_by_termid":{"MONDO:0012481":null},"xrefs":{"Monarch":{"xref_id":"0012481"}}}


id: PBO:0047278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCD2 opposite strand","termid":"PBO:0047278"}


id: GO:1903616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any MAPK cascade that is involved in axon regeneration.","definition_xrefs":["GO_REF:0000060","PMID:19417215","PMID:19164707","PMID:19737525","GOC:kmv","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK cascade involved in axon regeneration (obsolete GO:1903616)","synonyms":[{"name":"ERK/MAPK cascade involved in axon regeneration","type":"narrow"},{"name":"MAP kinase cascade involved in axon regeneration","type":"exact"},{"name":"MAP kinase kinase kinase cascade involved in axon regeneration","type":"exact"},{"name":"MAPK signal transduction involved in axon regeneration","type":"exact"},{"name":"MAPK signaling involved in axon regeneration","type":"related"},{"name":"MAPK signalling involved in axon regeneration","type":"related"},{"name":"MAPKKK cascade during sporulation involved in axon regeneration","type":"narrow"},{"name":"MAPKKK cascade involved in axon regeneration","type":"exact"},{"name":"mitogen-activated protein kinase cascade involved in axon regeneration","type":"exact"}],"termid":"GO:1903616"}


id: GO:1903293
data:
  {"annotated_genes":["SJAG_03681","SJAG_01270","SJAG_00229","SJAG_01599","SJAG_03793","SJAG_03353","SJAG_00600","SJAG_03940","SJAG_03500","SJAG_00534","SJAG_00078","SJAG_01187","SJAG_01906","SJAG_00369","SJAG_04638","SJAG_03126","SJAG_03631","SJAG_04968","SJAG_00823","SJAG_00526","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73303,79866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005955"},{"annotations":[118517,100620,112258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990567"},{"annotations":[110035,113051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071595"},{"annotations":[73025,107716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030289"},{"annotations":[93319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000164"},{"annotations":[65094,62799,71447,72061,78630,104813,76124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000159"},{"annotations":[115779,118247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008287"},{"annotations":[112263,98024,116881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatase activity.","definition_xrefs":["GO_REF:0000088","PMID:24766807","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01187":null,"SJAG_01270":null,"SJAG_01599":null,"SJAG_01906":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03500":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"phosphatase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1903293","terms_by_termid":{"GO:0000159":null,"GO:0000164":null,"GO:0005955":null,"GO:0008287":null,"GO:0030289":null,"GO:0071595":null,"GO:0072357":null,"GO:1990567":null}}


id: GO:0030435
data:
  {"annotated_genes":["SJAG_03483","SJAG_03557","SJAG_02320","SJAG_05309","SJAG_00405","SJAG_01483","SJAG_00993","SJAG_00663","SJAG_04868","SJAG_03587","SJAG_04901","SJAG_00486","SJAG_01321","SJAG_04859","SJAG_03746","SJAG_01531","SJAG_01769","SJAG_03090","SJAG_04271","SJAG_01017","SJAG_00974","SJAG_00826","SJAG_04483","SJAG_03057","SJAG_02718","SJAG_01662","SJAG_04184","SJAG_04781","SJAG_04236","SJAG_04080","SJAG_03013","SJAG_02712","SJAG_04010","SJAG_02529","SJAG_04238","SJAG_04922","SJAG_04615","SJAG_00114","SJAG_00971","SJAG_02241","SJAG_04853","SJAG_02169","SJAG_00821","SJAG_03688","SJAG_03915","SJAG_04140","SJAG_04470","SJAG_02248","SJAG_03250","SJAG_03536","SJAG_04275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96850,97268,101049,105445,111818,113016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[94357,111624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90587,89044,88552,92109],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[73430],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[104487,114385,118080,109384,118088],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[73431,91840,105297],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[107697,97917,118832,102028,99154,105611,114234,97880,119132,91630,110424,119314,95706,100227],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[107150,92631,103234,97881,104445,100159,100160,108030,97201,114235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[111508],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102607],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[91067],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[92528],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[100162,116271,94841,100442,100161,106335],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cellular spore, a cell form that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["ISBN:0072992913","GOC:mah","GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporulation","termid":"GO:0043934"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Sporogenesis"],"synonyms":[{"name":"cellular spore formation by sporulation","type":"exact"},{"name":"spore biosynthesis","type":"exact"},{"name":"spore differentiation","type":"exact"},{"name":"spore formation","type":"exact"}],"termid":"GO:0030435","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0073042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scleraxis bHLH transcription factor","termid":"PBO:0073042"}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: MOD:00382
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionyl-L-tyrosine dipeptide to form 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one.","definition_xrefs":["RESID:AA0377","PubMed:11259412","PubMed:15491166","PubMed:10852900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","synonyms":[{"name":"3-(2-methylsulfanyl)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-amino-3,6-didehydropyrazin-2-ol","type":"exact"},{"name":"3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one","type":"exact"},{"name":"GFP-like chromoprotein asFP595 chromophore","type":"exact"},{"name":"L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"}],"termid":"MOD:00382"}


id: PBO:0087715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; general transcription factor involved in telomere maintenance","termid":"PBO:0087715"}


id: PBO:0013810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8","termid":"PBO:0013810"}


id: _global:never_in_taxon
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"never_in_taxon","secondary_identifiers":["RO:0002161"],"termid":"_global:never_in_taxon","xrefs":{"Monarch":{"xref_id":"never_in_taxon"}}}


id: MONDO:0016612
data:
  {"annotated_genes":["SJAG_02457","SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[86102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"X-linked form of cerebellar ataxia.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01400":null,"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050953","DOID:0111828","GARD:20665","Orphanet:247765"],"synonyms":[{"name":"X-linked hereditary ataxia","type":"exact"},{"name":"cerebellar ataxia, X-linked","type":"exact"},{"name":"hereditary ataxia, X-linked","type":"exact"}],"termid":"MONDO:0016612","terms_by_termid":{"MONDO:0010524":null,"MONDO:0010547":null},"xrefs":{"Monarch":{"xref_id":"0016612"}}}


id: MONDO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinoschisis of fovea","secondary_identifiers":["MESH:C538369","GARD:9143","MEDGEN:340313","UMLS:C1849397","OMIM:268080"],"synonyms":[{"name":"familial foveal retinoschisis","type":"related"},{"name":"foveal retinoschisis","type":"related"},{"name":"retinoschisis of fovea","type":"exact"}],"termid":"MONDO:0009988","xrefs":{"Monarch":{"xref_id":"0009988"}}}


id: PBO:0001691
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.-","termid":"PBO:0001691"}


id: PBO:0054469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1868","termid":"PBO:0054469"}


id: GO:0034111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"negatively_regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"}


id: GO:0019420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reduction of sulfate to hydrogen sulfide, which acts as a terminal electron acceptor. Sulfate is activated to adenosine-phosphosulfate (APS) which is then reduced to sulfite, which is in turn reduced to hydrogen sulfide.","definition_xrefs":["PMID:26680199","PMID:25400653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"},{"relation_name":"is_a","term_name":"anaerobic respiration","termid":"GO:0009061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"dissimilatory sulfate reduction","secondary_identifiers":["MetaCyc:DISSULFRED-PWY","Wikipedia:Sulfate-reducing_microorganism"],"synonyms":[{"name":"dissimilatory sulphate reduction","type":"exact"}],"termid":"GO:0019420"}


id: PBO:0074569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 25","termid":"PBO:0074569"}


id: PBO:0041852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 2","termid":"PBO:0041852"}


id: MONDO:0018358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"},{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0002280"],"is_obsolete":false,"name":"neonatal autoimmune hemolytic anemia","secondary_identifiers":["UMLS:C4751517","Orphanet:398109","GARD:21645","MEDGEN:1662969"],"synonyms":[{"name":"neonatal AHA","type":"exact"},{"name":"neonatal AIHA","type":"exact"}],"termid":"MONDO:0018358","xrefs":{"Monarch":{"xref_id":"0018358"}}}


id: PBO:0086977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the Glc7p type-1 protein phosphatase; involved with Reg1p, Glc7p, and Snf1p in regulation of glucose-repressible genes, also involved in glucose-induced proteolysis of maltose permease; REG2 has a paralog, REG1, that arose from the whole genome duplication","termid":"PBO:0086977"}


id: GO:0048440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the carpel over time, from its formation to the mature structure. A carpel is an organ (generally believed to be a modified foliar unit) at the centre of a flower, bearing one or more ovules and having its margins fused together or with other carpels to enclose the ovule in an ovary, and consisting also of a stigma and usually a style.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"gynoecium development","termid":"GO:0048467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carpel development","secondary_identifiers":["GO:0048429"],"termid":"GO:0048440"}


id: MONDO:0035540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neuroendocrine tumor arising from chromaffin cells of the adrenal medulla (pheochromocytoma) or from sympathetic and parasympathetic ganglia (paraganglioma). These tumors are most often benign and may produce catecholamines in excess causing hypertension and sometimes severe acute cardiovascular complications.","definition_xrefs":["Orphanet:573163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal gland neoplasm","termid":"MONDO:0021227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma-paraganglioma","secondary_identifiers":["MEDGEN:1826130","UMLS:C5681712","GARD:22315"],"termid":"MONDO:0035540","xrefs":{"Monarch":{"xref_id":"0035540"}}}


id: FYPO:0004720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to heat shock. Heat shock is a form of heat stress in which cells are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah","PMID:11711540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to heat shock","synonyms":[{"name":"normal cell population viability following heat shock","type":"exact"}],"termid":"FYPO:0004720"}


id: PBO:0059564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1H","termid":"PBO:0059564"}


id: MONDO:0024773
data:
  {"annotated_genes":["SJAG_02223"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86320],"is_not":false,"summary":null,"term":"MONDO:0024773"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02223":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070595","OMIM:301077","MEDGEN:1804024","UMLS:C5676882"],"synonyms":[{"name":"SPGFX4","type":"exact"},{"name":"spermatogenic failure, X-linked, 4","type":"exact"}],"termid":"MONDO:0024773","terms_by_termid":{"MONDO:0024773":null},"xrefs":{"Monarch":{"xref_id":"0024773"}}}


id: MOD:01815
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-glutamic acid residue to form L-glutamate thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:19678698","PubMed:18406324","PubMed:893891","RESID:AA0541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-glutamate thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-3-carboxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[-1-azanyl-3-carboxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Glu-Cys)","type":"exact"},{"name":"L-glutamate thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01815"}


id: MONDO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of rickets caused by inactivating mutation(s) in the CYP2R1 gene, encoding vitamin D 25-hydroxylase, the hepatic enzyme that converts vitamin D to 25-hydroxyvitamin D, the precursor of 1,25-dihydroxyvitamin D (calcitriol). The condition is characterized by reduced serum concentrations of 25-hydroxyvitamin D, hypophosphatemia, hypocalcemia with secondary hyperparathyroidism and elevated serum alkaline phosphatase, and by failure to thrive, seizures, muscle weakness, and rickets.","definition_xrefs":["NCIT:C131074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets, type 1","termid":"MONDO:0009924"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"vitamin D hydroxylation-deficient rickets, type 1B","secondary_identifiers":["MESH:C564005","OMIM:600081","MEDGEN:374020","DOID:0080887","GARD:18415","UMLS:C1838657"],"synonyms":[{"name":"25-Hydroxyvitamin D3 deficiency, selective","type":"related"},{"name":"CYP2R1 vitamin D-dependent rickets, type 1","type":"exact"},{"name":"Pseudovitamin D3 deficiency rickets due to 25-Hydroxylase deficiency","type":"related"},{"name":"VDDR1B","type":"related"},{"name":"Vitam D hydroxylation-deficient rickets type 1b","type":"exact"},{"name":"rickets due to defect in vitamin D 25-hydroxylation deficiency","type":"exact"},{"name":"vitamin D 25-Hydroxylase deficiency","type":"exact"},{"name":"vitamin D hydroxylation-deficient rickets type 1b","type":"exact"},{"name":"vitamin D hydroxylation-deficient rickets, type 1B","type":"exact"},{"name":"vitamin D-dependent rickets, type 1 caused by mutation in CYP2R1","type":"exact"},{"name":"vitamin D-dependent rickets, type 1B","type":"related"}],"termid":"MONDO:0010810","xrefs":{"Monarch":{"xref_id":"0010810"}}}


id: FYPO:0003054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PomBase:mah","PMID:22582262","PMID:23117617","PMID:24173580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased homologous chromosome pairing","termid":"FYPO:0003025"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"decreased homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"decreased homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"decreased synapsis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"reduced homologous chromosome pairing at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003054"}


id: PR:P41410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair and recombination protein RAD54-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.03c","secondary_identifiers":["UniProtKB:P41410"],"synonyms":[{"name":"RAD54 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RAD54L","type":"exact"}],"termid":"PR:P41410"}


id: PBO:0117402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM11 antisense RNA 1","termid":"PBO:0117402"}


id: MONDO:0013009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Megarbane-Jalkh syndrome","secondary_identifiers":["OMIM:612785","MESH:C548071","UMLS:C2748555","MEDGEN:412581"],"synonyms":[{"name":"Megarbane Jalkh syndrome","type":"related"},{"name":"Megarbane-Jalkh syndrome","type":"exact"},{"name":"developmental delay dysmorphic features neonatal spontaneous fractures wrinkled skin and hepatic failure","type":"related"},{"name":"developmental delay, dysmorphic features, neonatal spontaneous fractures, wrinkled skin, and hepatic failure","type":"related"}],"termid":"MONDO:0013009","xrefs":{"Monarch":{"xref_id":"0013009"}}}


id: PBO:0049431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 8","termid":"PBO:0049431"}


id: GO:0072320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"volume-sensitive anion channel activity","termid":"GO:0005225"},{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"volume-sensitive chloride channel activity","synonyms":[{"name":"swell-activated chloride channel","type":"related"}],"termid":"GO:0072320"}


id: PATO:0020001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual based upon genotypic composition that confers the capability for an organism to differentiate male gonads.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genotypic sex","termid":"PATO:0020000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male genotypic sex","termid":"PATO:0020001"}


id: MONDO:0850058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease","termid":"MONDO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"chronic neurovisceral acid sphingomyelinase deficiency","secondary_identifiers":["GARD:22456","MEDGEN:1842316","UMLS:C5539139","Orphanet:618891"],"termid":"MONDO:0850058","xrefs":{"Monarch":{"xref_id":"0850058"}}}


id: GO:0017082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a mineralocorticoid and transmitting the signal to the transcriptional machinery by binding to a specific DNA sequence in order to modulate transcription by RNA polymerase II.","definition_xrefs":["GOC:signaling","PMID:20932876"],"gene_count":0,"genotype_count":0,"name":"obsolete mineralocorticoid receptor activity (obsolete GO:0017082)","synonyms":[{"name":"aldosterone receptor","type":"narrow"}],"termid":"GO:0017082"}


id: GO:0032273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"positively_regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein polymerization","synonyms":[{"name":"activation of protein polymerization","type":"narrow"},{"name":"stimulation of protein polymerization","type":"narrow"},{"name":"up regulation of protein polymerization","type":"exact"},{"name":"up-regulation of protein polymerization","type":"exact"},{"name":"upregulation of protein polymerization","type":"exact"}],"termid":"GO:0032273"}


id: GO:0005310
data:
  {"annotated_genes":["SJAG_00671","SJAG_00522","SJAG_02140","SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015139"},{"annotations":[88755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034658"},{"annotations":[96895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[67746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015140"},{"annotations":[101977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[101978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901239"},{"annotations":[88756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015131"},{"annotations":[101980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of dicarboxylic acids from one side of a membrane to the other. A dicarboxylic acid is an organic acid with two COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"dicarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015365","Reactome:R-HSA-372843","GO:0005312","Reactome:R-HSA-1614546"],"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"},{"name":"dicarboxylate carrier","type":"narrow"},{"name":"dicarboxylic acid permease activity","type":"related"},{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0005310","terms_by_termid":{"GO:0015131":null,"GO:0015139":null,"GO:0015140":null,"GO:0015183":null,"GO:0015366":null,"GO:0034658":null,"GO:0097434":null,"GO:1901239":null}}


id: MONDO:0032816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with ataxia, hypotonia, and microcephaly","secondary_identifiers":["UMLS:C5231413","MEDGEN:1684871","GARD:18519","OMIM:618569"],"synonyms":[{"name":"NEDAHM","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH ATAXIA, HYPOTONIA, AND MICROCEPHALY","type":"related"}],"termid":"MONDO:0032816","xrefs":{"Monarch":{"xref_id":"0032816"}}}


id: PBO:0039856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 22","termid":"PBO:0039856"}


id: MONDO:0017733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidosis","termid":"MONDO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"alpha-mannosidosis, adult form","secondary_identifiers":["NANDO:2201189","Orphanet:309288","GARD:17408","MEDGEN:1843432","NANDO:1200128","SCTID:58112007","GTR:AN0103811","GTR:AN0103810","UMLS:C5679974"],"synonyms":[{"name":"Alpha-mannosidosis adult-onset form","type":"related"},{"name":"lysosomal alpha-D-mannosidase deficiency, adult form","type":"exact"}],"termid":"MONDO:0017733","xrefs":{"Monarch":{"xref_id":"0017733"}}}


id: GO:1905063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","PMID:19088079","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell differentiation","synonyms":[{"name":"regulation of VSMC differentiation","type":"exact"},{"name":"regulation of vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1905063"}


id: MONDO:0012633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malaria (obsolete MONDO:0012633)","termid":"MONDO:0012633","xrefs":{"Monarch":{"xref_id":"0012633"}}}


id: PBO:0091552
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleterious Haploid Meiosis","termid":"PBO:0091552"}


id: PBO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase at the interface between RNA polymerase II and chaperone (predicted)","termid":"PBO:0003322"}


id: PBO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein pseudogene 1","termid":"PBO:0052544"}


id: PBO:0044824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 110","termid":"PBO:0044824"}


id: FYPO:0001689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing 4-nitroquinoline N-oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on 4-nitroquinoline N-oxide","synonyms":[{"name":"normal cell population growth in presence of 4-nitroquinoline N-oxide","type":"exact"},{"name":"normal cell population growth on 4-NQO","type":"exact"},{"name":"normal cell population growth on 4-nitroquinoline N-oxide","type":"exact"},{"name":"normal cell population growth on 4NQO","type":"exact"},{"name":"normal cellular response to 4-nitroquinoline N-oxide","type":"related"},{"name":"normal vegetative cell population growth on 4-nitroquinoline N-oxide","type":"exact"}],"termid":"FYPO:0001689"}


id: PBO:0108936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 15","termid":"PBO:0108936"}


id: MONDO:0019245
data:
  {"annotated_genes":["SJAG_04323","SJAG_03052","SJAG_02068","SJAG_04790","SJAG_02949","SJAG_02518","SJAG_00158","SJAG_02056","SJAG_02716","SJAG_00570","SJAG_01407"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86785,86786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"},{"annotations":[85687,85686,85688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019149"},{"annotations":[85363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010155"},{"annotations":[86955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010526"},{"annotations":[86186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009744"},{"annotations":[86196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008767"},{"annotations":[87270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009756"},{"annotations":[86554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011871"},{"annotations":[86547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011873"},{"annotations":[85945,85944,85946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019148"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder in which harmful amounts of lipids accumulate in cells and tissues. Because of a functionally impaired hydrolase or auxiliary protein, their lipid substrates cannot be degraded, accumulate in the lysosome, and slowly spread to other intracellular membranes.","definition_xrefs":["PMID:21502308","Wikipedia:Lipid_storage_disorder"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00158":null,"SJAG_00570":null,"SJAG_01407":null,"SJAG_02056":null,"SJAG_02068":null,"SJAG_02518":null,"SJAG_02716":null,"SJAG_02949":null,"SJAG_03052":null,"SJAG_04323":null,"SJAG_04790":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"lysosomal lipid storage disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:272.7","MEDGEN:9780","MESH:D008064","Orphanet:79204","SCTID:10741005","UMLS:C0023794","DOID:9455","GARD:12511","ICD9:272.8"],"synonyms":[{"name":"inborn error of lipid storage","type":"exact"},{"name":"inborn lipid storage disorder","type":"exact"},{"name":"lipid storage disease","type":"exact"},{"name":"lipidoses","type":"related"},{"name":"lipidosis","type":"related"},{"name":"lipoid storage diseas","type":"exact"},{"name":"lipoid storage disease","type":"exact"},{"name":"lipoid storage disorder","type":"exact"},{"name":"lipoidoses","type":"related"},{"name":"lipoidosis","type":"related"},{"name":"rare inborn error of lipid storage","type":"exact"}],"termid":"MONDO:0019245","terms_by_termid":{"MONDO:0008083":null,"MONDO:0008767":null,"MONDO:0009744":null,"MONDO:0009756":null,"MONDO:0010155":null,"MONDO:0010526":null,"MONDO:0011871":null,"MONDO:0011873":null,"MONDO:0019148":null,"MONDO:0019149":null},"xrefs":{"Monarch":{"xref_id":"0019245"}}}


id: MONDO:0017949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis (HCHWA), Arctic type is a form of HCHWA characterized by an age of onset of 54-61 years and progressive Alzheimer's disease-like dementia, without intracerebral hemorrhages.","definition_xrefs":["Orphanet:324723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABeta amyloidosis, Arctic type","secondary_identifiers":["UMLS:C2751494","ICD10EXP:E85.4+","GARD:17493","ICD10EXP:I68.0*","MEDGEN:414032"],"synonyms":[{"name":"ABetaE22G amyloidosis","type":"exact"},{"name":"HCHWA, Arctic type","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Arctic variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Arctic type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Arctic type","type":"exact"}],"termid":"MONDO:0017949","xrefs":{"Monarch":{"xref_id":"0017949"}}}


id: PBO:0042222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNQ pseudogene 3","termid":"PBO:0042222"}


id: PR:Q9P7M6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P27G11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.12","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAP27G11.12","type":"exact"}],"termid":"PR:Q9P7M6"}


id: MONDO:0014803
data:
  {"annotated_genes":["SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86153],"is_not":false,"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"},{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0004069"],"is_obsolete":false,"name":"spasticity-ataxia-gait anomalies syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:401866","MEDGEN:905660","OMIM:616859","GARD:12681","UMLS:C4225178"],"synonyms":[{"name":"SPAHGC","type":"exact"},{"name":"childhood-onset spasticity with hyperglycinemia","type":"related"},{"name":"childhood-onset spasticity with variant non-ketotic hyperglycinemia","type":"exact"},{"name":"spasticity, childhood-onset, with hyperglycinemia","type":"exact"}],"termid":"MONDO:0014803","terms_by_termid":{"MONDO:0014803":null},"xrefs":{"Monarch":{"xref_id":"0014803"}}}


id: PBO:0052607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAS proto-oncogene, GTPase pseudogene 1","termid":"PBO:0052607"}


id: PBO:0065839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family pseudogene 4","termid":"PBO:0065839"}


id: GO:0008075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor guanylate cyclase activity (obsolete GO:0008075)","synonyms":[{"name":"receptor guanylate cyclase activity","type":"exact"}],"termid":"GO:0008075"}


id: GO:0045332
data:
  {"annotated_genes":["SJAG_02897","SJAG_03209","SJAG_02943","SJAG_00669","SJAG_01470","SJAG_02132","SJAG_00018","SJAG_05209","SJAG_00587","SJAG_00230","SJAG_02516","SJAG_00589","SJAG_00576","SJAG_04734","SJAG_01945","SJAG_01095","SJAG_01731","SJAG_02957","SJAG_03050","SJAG_02581","SJAG_02114","SJAG_06440"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60040,62827,72480,73209,73371,74880,75138,90857,90858,90859,90860,90861,90862,90863,90864,90865,99799,101605,102534,109822],"is_not":false,"summary":null,"term":"GO:0045332"},{"annotations":[68941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[73547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The movement of a phospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["PMID:20302864","ISBN:0815316194","PMID:20043909","PMID:16452632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03209":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"phospholipid translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1660524","Reactome:R-HSA-1660508","Reactome:R-HSA-1660537","Reactome:R-HSA-1660502","Reactome:R-HSA-1660510"],"synonyms":[{"name":"flippase","type":"related"},{"name":"phospholipid scrambling","type":"related"}],"termid":"GO:0045332","terms_by_termid":{"GO:0017121":null,"GO:0045332":null,"GO:0140331":null}}


id: GO:0052864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-deoxy-D-xylulose 5-phosphate, the 5-phospho derivative of 1-deoxy-D-xylulose. 1-deoxy-D-xylulose 5-phosphate is an intermediate in the non-mevalonate pathway and a common precursor for isoprenoid, thiamin, and pyridoxol biosynthesis.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"1-deoxy-D-xylulose 5-phosphate metabolic process","termid":"GO:0052863"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-deoxy-D-xylulose 5-phosphate catabolic process","synonyms":[{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate breakdown","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate catabolic process","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate catabolism","type":"exact"},{"name":"(2R,3S)-2,3-dihydroxy-4-oxopentyl dihydrogen phosphate degradation","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate breakdown","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate catabolism","type":"exact"},{"name":"1-deoxy-D-xylulose 5-phosphate degradation","type":"exact"}],"termid":"GO:0052864"}


id: MONDO:0015957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic movement disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic movement disorder (obsolete MONDO:0015957)","secondary_identifiers":["Orphanet:183521"],"synonyms":[{"name":"rare genetic movement disorder","type":"exact"}],"termid":"MONDO:0015957","xrefs":{"Monarch":{"xref_id":"0015957"}}}


id: PBO:0084265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; EMP46 has a paralog, EMP47, that arose from the whole genome duplication","termid":"PBO:0084265"}


id: PBO:0025539
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid metabolism disorder","termid":"PBO:0025539"}


id: GO:2000543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gastrulation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gastrulation","termid":"GO:0010470"},{"relation_name":"is_a","term_name":"positive regulation of embryonic development","termid":"GO:0040019"},{"relation_name":"positively_regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of gastrulation","termid":"GO:2000543"}


id: GO:0072348
data:
  {"annotated_genes":["SJAG_04673","SJAG_04295","SJAG_01660","SJAG_01344","SJAG_05213","SJAG_01589","SJAG_03652","SJAG_02780","SJAG_03577","SJAG_03334","SJAG_00835","SJAG_02463","SJAG_00671","SJAG_00991","SJAG_02962","SJAG_04325","SJAG_02779","SJAG_01941","SJAG_01890","SJAG_03497","SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[72144,79599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[63673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[95857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[113438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[97383,96403,118503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[101678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[101679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[70863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[88607,102923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[88754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990557"},{"annotations":[103953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[93677],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[110430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902434"},{"annotations":[61887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902358"},{"annotations":[101000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[90485,90484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of compounds that contain sulfur, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01344":null,"SJAG_01589":null,"SJAG_01660":null,"SJAG_01890":null,"SJAG_01941":null,"SJAG_02463":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02962":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_03652":null,"SJAG_04295":null,"SJAG_04325":null,"SJAG_04673":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sulfur compound transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulfur-containing compound transport","type":"exact"}],"termid":"GO:0072348","terms_by_termid":{"GO:0035348":null,"GO:0071934":null,"GO:0071996":null,"GO:0098709":null,"GO:0140125":null,"GO:0160007":null,"GO:1902358":null,"GO:1902434":null,"GO:1903712":null,"GO:1905135":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990553":null,"GO:1990554":null,"GO:1990557":null,"GO:1990559":null}}


id: PBO:0043049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and histidine rich domain containing 2, pseudogene","termid":"PBO:0043049"}


id: MOD:00597
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 277 redundant with Unimod 39. Remap to MOD:00110.","definition_xrefs":["Unimod:277"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00597 methyl methanethiosulfonate (obsolete MOD:00597)","termid":"MOD:00597"}


id: MONDO:0006408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare adenoma of the adrenal cortex that produces androgens or estrogens.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal cortex adenoma","termid":"MONDO:0003924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sex hormone-producing adrenal cortex adenoma","secondary_identifiers":["EFO:1000523","MEDGEN:328025","NCIT:C48452","UMLS:C1710067"],"synonyms":[{"name":"Sex hormone producing adrenal cortex adenoma","type":"exact"},{"name":"Sex hormone producing adrenal cortical adenoma","type":"exact"}],"termid":"MONDO:0006408","xrefs":{"Monarch":{"xref_id":"0006408"}}}


id: FYPO:0002795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, vacuoles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large vacuoles during vegetative growth","termid":"FYPO:0000123"},{"relation_name":"is_a","term_name":"vacuoles present in decreased numbers during vegetative growth","termid":"FYPO:0002793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"large vacuoles present in decreased numbers during vegetative growth","synonyms":[{"name":"enlarged vacuoles present in decreased numbers during vegetative growth","type":"exact"},{"name":"large vacuoles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"large vacuoles present in reduced numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0002795"}


id: MONDO:0000043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypomagnesemia (obsolete MONDO:0000043)","termid":"MONDO:0000043","xrefs":{"Monarch":{"xref_id":"0000043"}}}


id: GO:0043334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hexaprenyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-methionine = 2-hexaprenyl-3-methyl-6-methoxy-1,4-benzoquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:kd","PMID:9083048"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (obsolete GO:0043334)","synonyms":[{"name":"2-hexaprenyl-6-methoxy-1,4-benzoquinone methylase activity","type":"exact"}],"termid":"GO:0043334"}


id: GO:0050107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a monoterpenol = CoA + a monoterpenol acetate ester.","definition_xrefs":["EC:2.3.1.69","MetaCyc:MONOTERPENOL-O-ACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"monoterpenol O-acetyltransferase activity","synonyms":[{"name":"acetyl-CoA:monoterpenol O-acetyltransferase activity","type":"related"},{"name":"menthol transacetylase activity","type":"narrow"}],"termid":"GO:0050107"}


id: PBO:0087359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing protein; required for splicing of two mitochondrial group I introns (BI3 in COB and AI5beta in COX1); forms a splicing complex, containing four subunits of Mrs1p and two subunits of the BI3-encoded maturase, that binds to the BI3 RNA; MRS1 has a paralog, CCE1, that arose from the whole genome duplication","termid":"PBO:0087359"}


id: MONDO:0009741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 1","secondary_identifiers":["MEDGEN:412713","UMLS:C2749485","OMIM:256700"],"synonyms":[{"name":"neuroblastoma, susceptibility to","type":"broad"},{"name":"neuroblastoma, susceptibility to, 1, autosomal dominant, somatic mutation","type":"exact"},{"name":"susceptibility to neuroblastoma","type":"broad"}],"termid":"MONDO:0009741","xrefs":{"Monarch":{"xref_id":"0009741"}}}


id: MONDO:1040005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder in which the cause of the disease is a mutation in the PRPF19 gene. This disorder is characterised by developmental, motor and speech delay, and facial dysmorphisms. Most patients present mild to moderate intellectual disability, autism spectrum disorder or autistic features, and hypotonia. Other phenotypes observed less frequently include seizures, and visual and cardiac abnormalities.","definition_xrefs":["PMID:37962958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"PRPF19-related neurodevelopmental disorder","termid":"MONDO:1040005","xrefs":{"Monarch":{"xref_id":"1040005"}}}


id: PBO:0117382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID1B antisense RNA 1","termid":"PBO:0117382"}


id: GO:0070828
data:
  {"annotated_genes":["SJAG_04213","SJAG_02701","SJAG_01610","SJAG_01601","SJAG_03997","SJAG_03664","SJAG_02165","SJAG_04755","SJAG_03635","SJAG_01465","SJAG_01046","SJAG_00302","SJAG_01050","SJAG_00335","SJAG_03543","SJAG_02401","SJAG_03945","SJAG_01745","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91682,96981,117449],"is_not":false,"summary":null,"term":"GO:0070828"},{"annotations":[103371,112921,115555,118052,99446,103540,96492,94417,117421,99230,99472,88497,91093,113358,112919,112920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033696"}]},"cv_name":"biological_process","definition":"Any process that results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_01046":null,"SJAG_01050":null,"SJAG_01465":null,"SJAG_01601":null,"SJAG_01610":null,"SJAG_01745":null,"SJAG_02165":null,"SJAG_02401":null,"SJAG_02701":null,"SJAG_03118":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03945":null,"SJAG_03997":null,"SJAG_04213":null,"SJAG_04755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"heterochromatin organisation","type":"exact"}],"termid":"GO:0070828","terms_by_termid":{"GO:0033696":null,"GO:0070828":null}}


id: GO:1902803
data:
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id: GO:0030824
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id: PBO:0004449
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id: GO:0030163
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id: PBO:0029776
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id: PBO:0076313
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id: PBO:0007604
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id: PBO:0081249
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id: FYPO:0007180
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id: PATO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Multicolored quality inhering in a bearer by virtue of the bearer's being dappled with spots, patches, or blotches of different colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mottled","termid":"PATO:0002274"}


id: PBO:0062834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex non-catalytic subunit","termid":"PBO:0062834"}


id: GO:0018761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-dibromo-4-hydroxybenzonitrile + 2 H2O = 3,5-dibromo-4-hydroxybenzoate + NH4. Involved in the bacterial degradation of the herbicide bromoxynil.","definition_xrefs":["RHEA:22100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"bromoxynil nitrilase activity","secondary_identifiers":["UM-BBD_enzymeID:r0548","EC:3.5.5.6","MetaCyc:3.5.5.6-RXN","KEGG_REACTION:R04349"],"synonyms":[{"name":"3,5-dibromo-4-hydroxybenzonitrile aminohydrolase activity","type":"exact"},{"name":"bromoxynil-specific nitrilase activity","type":"exact"}],"termid":"GO:0018761"}


id: MONDO:0017052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intermediate maple syrup urine disease (intermediate MSUD) is a milder form of MSUD characterized by persistently raised branched-chain amino acids (BCAAs) and ketoacids, but fewer or no acute episodes of decompensation.","definition_xrefs":["Orphanet:268162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"intermediate maple syrup urine disease","secondary_identifiers":["MEDGEN:301223","SCTID:405287008","NANDO:2201079","UMLS:C1621920","GARD:17264"],"synonyms":[{"name":"Intermediate BCKD deficiency","type":"exact"},{"name":"Intermediate MSUD","type":"exact"},{"name":"Intermediate branched-chain 2-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"Intermediate branched-chain alpha-ketoacid dehydrogenase deficiency","type":"exact"},{"name":"intermediate maple syrup urine disease","type":"exact"}],"termid":"MONDO:0017052","xrefs":{"Monarch":{"xref_id":"0017052"}}}


id: PBO:0059237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L10","termid":"PBO:0059237"}


id: GO:0021753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior salivary nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls","GOC:curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary nucleus development","termid":"GO:0021751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior salivary nucleus development","termid":"GO:0021753"}


id: MONDO:0003463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of glandular structures with endometrial-type well-differentiated cells in a fibrotic stroma.","definition_xrefs":["NCIT:C27287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid adenofibroma","secondary_identifiers":["ICDO:8380/0","ICDO:8381/0","MEDGEN:389179","DOID:5480","UMLS:C2212024"],"synonyms":[{"name":"ovarian endometrioid adenofibroma","type":"exact"}],"termid":"MONDO:0003463","xrefs":{"Monarch":{"xref_id":"0003463"}}}


id: MONDO:0017379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polyneuropathy-intellectual disability-acromicria-premature menopause syndrome is a rare genetic syndromic intellectual disability characterized by intellectual disability, polyneuropathy, short stature and short limbs, brachydactyly, and premature ovarian insufficiency. Only one familial case with three affected females was described and there have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:2928"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy-intellectual disability-acromicria-premature menopause syndrome","secondary_identifiers":["GARD:4424","UMLS:C4749397","MEDGEN:1665486"],"synonyms":[{"name":"Lundberg syndrome","type":"exact"},{"name":"polyneuropathy - intellectual deficit - acromicria - premature menopause","type":"related"},{"name":"polyneuropathy intellectual disability acromicria premature menopause","type":"related"},{"name":"polyneuropathy mental retardation acromicria premature menopause","type":"related"}],"termid":"MONDO:0017379","xrefs":{"Monarch":{"xref_id":"0017379"}}}


id: PBO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion library version 2. has incorrect strain","termid":"PBO:0011111"}


id: GO:0000014
data:
  {"annotated_genes":["SJAG_01948","SJAG_02556","SJAG_04183","SJAG_02031","SJAG_02828","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72236,79764,110347,111138],"is_not":false,"summary":null,"term":"GO:0000014"},{"annotations":[119066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[104477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within a single-stranded deoxyribonucleic acid molecule by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01948":null,"SJAG_02031":null,"SJAG_02556":null,"SJAG_02828":null,"SJAG_04183":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"single-stranded DNA endodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific endodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific endodeoxyribonuclease activity","type":"related"}],"termid":"GO:0000014","terms_by_termid":{"GO:0000014":null,"GO:1990599":null,"GO:1990601":null}}


id: PBO:0062471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 162 pseudogene","termid":"PBO:0062471"}


id: GO:0140727
data:
  {"annotated_genes":["SJAG_04141","SJAG_01008","SJAG_02119","SJAG_00414","SJAG_02594","SJAG_04030","SJAG_04574","SJAG_04061","SJAG_01540","SJAG_01601","SJAG_02621","SJAG_03193","SJAG_02725","SJAG_00756","SJAG_03916","SJAG_04253","SJAG_00087","SJAG_03356","SJAG_02409","SJAG_00058","SJAG_03689","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89119,89175,91613,94432,95673,97062,99454,99892,106868,110799,110965,111519,112518,113977,114609,114873,115725,116287,117997,118282,118396,119115],"is_not":false,"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"The formation of pericentric heterochromatin by a process mediated by a small interfering RNA (siRNA).","definition_xrefs":["PMID:15289661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"},{"relation_name":"is_a","term_name":"siRNA-mediated heterochromatin formation","termid":"GO:0141194"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01540":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"siRNA-mediated pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNAi-mediated heterochromatin assembly at centromere","type":"exact"},{"name":"siRNA dependent pericentric heterochromatin assembly","type":"exact"},{"name":"siRNA-dependent pericentric heterochromatin assembly","type":"exact"},{"name":"siRNA-dependent pericentric heterochromatin formation","type":"exact"}],"termid":"GO:0140727","terms_by_termid":{"GO:0140727":null}}


id: GO:0007375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Internalization of the anterior midgut into the interior of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"gastrulation involving germ band extension","termid":"GO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut invagination","termid":"GO:0007375"}


id: MONDO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Superior mesenteric artery syndrome (SMAS) is a digestive condition that occurs when the duodenum (the first part of the small intestine) is compressed between two arteries (the aorta and the superior mesenteric artery). This compression causes partial or complete blockage of the duodenum. Symptoms vary based on severity, but can be severely debilitating. Symptoms may include abdominal pain, fullness, nausea, vomiting, and/or weight loss. SMAS typically is due toloss of the mesenteric fat pad (fatty tissue that surrounds the superior mesenteric artery). The most common cause is significant weight loss caused by medical disorders, psychological disorders, or surgery. In younger patients, it most commonly occurs after corrective spinal surgery for scoliosis. Delays in diagnosis may result in significant complications. Depending on the cause and severity, treatment options may include addressing the underlying cause, dietary changes (small feedings or a liquid diet), and/or surgery. Symptoms may not resolve completely after treatment.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"duodenal obstruction","termid":"MONDO:0002688"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"superior mesenteric artery syndrome","secondary_identifiers":["NORD:1955","DOID:3557","SCTID:197006009","MEDGEN:21404","MESH:D013478","Orphanet:622099","UMLS:C0038828","NCIT:C85175","GARD:7712"],"synonyms":[{"name":"Arteriomesenteric duodenal compression syndrome","type":"related"},{"name":"Cast syndrome","type":"related"},{"name":"Wilkie syndrome","type":"related"},{"name":"superior mesenteric artery syndrome","type":"exact"},{"name":"superior mesenteric artery syndromic disease","type":"exact"},{"name":"syndromic disease of superior mesenteric artery","type":"exact"},{"name":"vascular compression of the duodenum","type":"related"}],"termid":"MONDO:0002687","xrefs":{"Monarch":{"xref_id":"0002687"}}}


id: MONDO:0001430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal neovascularization","termid":"MONDO:0006713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"deep corneal vascularisation","secondary_identifiers":["SCTID:2102007","UMLS:C0155095","DOID:12087","ICD9:370.63","MEDGEN:509784"],"synonyms":[{"name":"deep vascularization of cornea","type":"exact"}],"termid":"MONDO:0001430","xrefs":{"Monarch":{"xref_id":"0001430"}}}


id: PBO:0049180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gremlin 1, DAN family BMP antagonist","termid":"PBO:0049180"}


id: PBO:0091745
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPBC18H10.16 was previously designated as can1","termid":"PBO:0091745"}


id: PATO:0002182
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a molecular entity, a single molecule, atom, ion, radical etc.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular quality","secondary_identifiers":["PATO:0002061"],"synonyms":[{"name":"relational molecular quality","type":"exact"}],"termid":"PATO:0002182"}


id: PBO:0068541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 146, pseudogene","termid":"PBO:0068541"}


id: PBO:0080185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 3","termid":"PBO:0080185"}


id: PBO:0047473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase","termid":"PBO:0047473"}


id: MONDO:0002645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the cerebrum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebritis","secondary_identifiers":["MEDGEN:149273","UMLS:C0742115","NCIT:C27199","DOID:3431"],"synonyms":[{"name":"cerebral hemisphere inflammation","type":"exact"},{"name":"inflammation of cerebral hemisphere","type":"exact"}],"termid":"MONDO:0002645","xrefs":{"Monarch":{"xref_id":"0002645"}}}


id: PBO:0042752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein V like 2","termid":"PBO:0042752"}


id: PR:Q9UTG1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A purine nucleoside phosphorylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01175","PANTHER:PTHR11904:SF9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside phosphorylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.16c","secondary_identifiers":["UniProtKB:Q9UTG1"],"synonyms":[{"name":"PNP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PNP","type":"exact"},{"name":"inosine phosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"inosine-guanosine phosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTG1"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: GO:0110033
data:
  {"annotated_genes":["SJAG_02311","SJAG_00266","SJAG_02426","SJAG_02481","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92427,116680,108282,100762,93092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway, the series of molecular signals generated as a consequence of glucose binding to a G protein-coupled receptor, where the pathway proceeds with activation of adenylyl cyclase and a subsequent increase in the concentration of cyclic AMP (cAMP).","definition_xrefs":["PMID:24297439","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0106070"},{"relation_name":"is_a","term_name":"regulation of glucose mediated signaling pathway","termid":"GO:1902659"},{"relation_name":"regulates","term_name":"adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","termid":"GO:0010619"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of adenylate cyclase-activating glucose-activated G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of adenylate cyclase-activating glucose-activated G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0110033","terms_by_termid":{"GO:0110034":null}}


id: GO:0016305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A phosphoinositide 3-kinase which can phosphorylate phosphatidylinositol and phosphatidylinositol-4-phosphate; the human form can phosphorylate phosphatidylinositol-4,5-bisphosphate in the presence of phosphatidylserine.","definition_xrefs":["PMID:9759495"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol 3-kinase activity, class II (obsolete GO:0016305)","synonyms":[{"name":"PI3KC2","type":"exact"},{"name":"phosphatidylinositol 3-kinase activity, class II","type":"exact"}],"termid":"GO:0016305"}


id: PBO:0012824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-added_by","termid":"PBO:0012824"}


id: GO:0039721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed at the periphery of the host cell nucleus by Baculoviruses.","definition_xrefs":["PMID:18434402","VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peristromal region viral factory","synonyms":[{"name":"PR","type":"related"}],"termid":"GO:0039721"}


id: PBO:0067213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 279, pseudogene","termid":"PBO:0067213"}


id: GO:0120192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the aggregation, arrangement and bonding together of a set of components to form a tight junction. A tight junction seals cells together in an epithelium in a way that prevents even small molecules from leaking from one side of the sheet to the other.","definition_xrefs":["GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"},{"relation_name":"is_a","term_name":"tight junction organization","termid":"GO:0120193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"tight junction assembly","synonyms":[{"name":"occluding cell junction assembly","type":"exact"},{"name":"occluding junction assembly","type":"exact"}],"termid":"GO:0120192"}


id: PBO:0053888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1168","termid":"PBO:0053888"}


id: PBO:0070101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 15 pseudogene","termid":"PBO:0070101"}


id: GO:0102965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + 2 H+ + 2 NADPH = a long-chain primary fatty alcohol + CoA + 2 NADP+. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pz","RHEA:52716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alcohol-forming long-chain fatty acyl-CoA reductase activity","secondary_identifiers":["EC:1.2.1.84","MetaCyc:RXN-9344"],"synonyms":[{"name":"alcohol-forming fatty acyl-CoA reductase activity","type":"broad"}],"termid":"GO:0102965"}


id: FYPO:0003661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is abnormal. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["PomBase:mah","GO:0006303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000293"],"is_obsolete":false,"name":"abnormal double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abnormal NHEJ","type":"exact"},{"name":"abnormal double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abnormal double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"abnormal nonhomologous end joining","type":"exact"}],"termid":"FYPO:0003661"}


id: PBO:0086065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Msb2p; may play a role in activation of the filamentous growth pathway","termid":"PBO:0086065"}


id: PBO:0087977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 3'-end processing endonuclease tRNase Z; also localized to mitochondria and interacts genetically with Rex2 exonuclease; homolog of the human candidate prostate cancer susceptibility gene ELAC2","termid":"PBO:0087977"}


id: FYPO:0000531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic cell cycle arrest in response to pheromone does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000530"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000298","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished mitotic cell cycle arrest in response to pheromone","synonyms":[{"name":"absent pheromone-induced mitotic cell cycle arrest","type":"exact"},{"name":"mitotic cell cycle arrest in response to pheromone abolished","type":"exact"},{"name":"pheromone-induced cell cycle arrest: absent","type":"related"},{"name":"pheromone-induced mitotic cell cycle arrest abolished","type":"exact"}],"termid":"FYPO:0000531"}


id: GO:0086021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an SA node cardiomyocyte and an atrial cardiomyocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"SA node cell to atrial cardiac muscle cell communication","termid":"GO:0086070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell communication by electrical coupling","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell communication by electrical coupling","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte communication by electrical coupling","type":"narrow"}],"termid":"GO:0086021"}


id: SO:0000716
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that has the quality dicistronic.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"dicistronic","termid":"SO:0000879"},{"relation_name":"is_a","term_name":"dicistronic_transcript","termid":"SO:0000079"},{"relation_name":"is_a","term_name":"polycistronic_mRNA","termid":"SO:0000634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic_mRNA","synonyms":[{"name":"dicistronic mRNA","type":"exact"},{"name":"dicistronic processed transcript","type":"related"}],"termid":"SO:0000716"}


id: MONDO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder presenting in childhood that is characterized by motor and/or phonic tics that occur daily or nearly daily for one to twelve months and are not attributed to an identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tic disorder","termid":"MONDO:0002420"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient tic disorder","secondary_identifiers":["UMLS:C0040702","MEDGEN:52814","ICD10CM:F95.0","NCIT:C116767","ICD9:307.21","DOID:2768","SCTID:56573006"],"synonyms":[{"name":"benign Tic disorder of childhood","type":"exact"}],"termid":"MONDO:0002419","xrefs":{"Monarch":{"xref_id":"0002419"}}}


id: PBO:0012044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase","termid":"PBO:0012044"}


id: FYPO:0005923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in subtelomeric regions is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level in chromatin","termid":"FYPO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased H2A.Z level at subtelomere","synonyms":[{"name":"H2A.Z accumulation at subtelomere","type":"exact"},{"name":"increased H2A.Z level at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased H2A.Z level at subtelomere during vegetative growth","type":"exact"},{"name":"increased H2A.Z level in chromatin at subtelomere","type":"exact"}],"termid":"FYPO:0005923"}


id: PBO:0047676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLII actin remodeling protein","termid":"PBO:0047676"}


id: GO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleus","secondary_identifiers":["GO:0033649"],"termid":"GO:0042025"}


id: GO:0075335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075335)","termid":"GO:0075335"}


id: PBO:0018175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint kinase Bub1","termid":"PBO:0018175"}


id: MONDO:0008797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anodontia is an extreme developmental dental anomaly characterized by the complete absence of all teeth.","definition_xrefs":["Orphanet:99797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anodontia","secondary_identifiers":["DOID:13714","MESH:D000848","MedDRA:10002583","ICD10CM:K00.0","OMIM:206780","SCTID:16958000","UMLS:C0399352","GARD:5818","icd11.foundation:413433873","MEDGEN:98313","ICD9:520.0"],"synonyms":[{"name":"absence of permanent teeth","type":"related"},{"name":"anodontia of permanent dentition","type":"related"},{"name":"complete absence of teeth","type":"exact"},{"name":"developmental absence of tooth","type":"exact"},{"name":"teeth, permanent, absence of","type":"related"},{"name":"total anodontia of permanent and deciduous teeth","type":"exact"}],"termid":"MONDO:0008797","xrefs":{"Monarch":{"xref_id":"0008797"}}}


id: PBO:0069561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 833, pseudogene","termid":"PBO:0069561"}


id: GO:0005628
data:
  {"annotated_genes":["SJAG_00971","SJAG_02736","SJAG_01469","SJAG_04483","SJAG_04080","SJAG_02368","SJAG_03587","SJAG_00430","SJAG_04184","SJAG_04948","SJAG_03721","SJAG_03915","SJAG_01855","SJAG_00826","SJAG_03145","SJAG_00821","SJAG_00405","SJAG_03536","SJAG_02076","SJAG_00974","SJAG_04001","SJAG_03079","SJAG_01697","SJAG_04275","SJAG_03483","SJAG_03746","SJAG_04781","SJAG_03250","SJAG_02169","SJAG_04922"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88551,91060,91628,91839,93228,93906,94202,94799,95703,96957,97879,101171,101802,102025,103570,103618,104486,105296,107695,109374,109611,114384,116541,117223,117806,119311],"is_not":false,"summary":null,"term":"GO:0005628"},{"annotations":[103232,118828,99153],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070056"},{"annotations":[103233,105610,118829],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The prospore membrane is a double-membraned structure that extends from the cytoplasmic face of the spindle pole bodies to encompass the spindle pole bodies and the four nuclear lobes that are formed during meiosis. It helps isolate the meiotic nuclei from the cytoplasm during spore formation and serves as a foundation for the formation of the spore walls. An example of this component is found in Schizosaccharomyces pombe.","definition_xrefs":["ISBN:0879693649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00430":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_01469":null,"SJAG_01697":null,"SJAG_01855":null,"SJAG_02076":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_02736":null,"SJAG_03079":null,"SJAG_03145":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03587":null,"SJAG_03721":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04001":null,"SJAG_04080":null,"SJAG_04184":null,"SJAG_04275":null,"SJAG_04483":null,"SJAG_04781":null,"SJAG_04922":null,"SJAG_04948":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"prospore membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FSM","type":"exact"},{"name":"ascospore-type prospore membrane","type":"exact"},{"name":"forespore membrane","type":"related"}],"termid":"GO:0005628","terms_by_termid":{"GO:0005628":null,"GO:0070056":null,"GO:0070057":null}}


id: PBO:0064141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N2","termid":"PBO:0064141"}


id: PBO:0017943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family Rrp1 (predicted)","termid":"PBO:0017943"}


id: PBO:0076783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin beta-propeller repeat containing 1","termid":"PBO:0076783"}


id: GO:0140618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe3+-siderophore + NAD+ + H+ -> 2 Fe2+-siderophore + NADH.","definition_xrefs":["RHEA:15061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-chelate reductase activity","termid":"GO:0000293"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ferric-chelate reductase (NADH) activity","secondary_identifiers":["MetaCyc:FERRIC-CHELATE-REDUCTASE-RXN","EC:1.16.1.7"],"synonyms":[{"name":"NADH:Fe(3+) oxidoreductase activity","type":"exact"},{"name":"NADH:Fe3+ oxidoreductase activity","type":"exact"},{"name":"ferric chelate reductase activity","type":"broad"},{"name":"iron chelate reductase activity","type":"broad"}],"termid":"GO:0140618"}


id: PATO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001064 absolute flux (obsolete PATO:0001064)","termid":"PATO:0001064"}


id: GO:1904390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cone retinal bipolar cell.","definition_xrefs":["PMID:24123365","GOC:TermGenie","GO_REF:0000086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cone retinal bipolar cell differentiation","synonyms":[{"name":"cone bipolar cell differentiation","type":"exact"},{"name":"retinal cone bipolar cell differentiation","type":"exact"}],"termid":"GO:1904390"}


id: PBO:0111948
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo Sfi1 Interactor","termid":"PBO:0111948"}


id: PBO:0045585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 7","termid":"PBO:0045585"}


id: PBO:0067098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 138, pseudogene","termid":"PBO:0067098"}


id: PBO:0059917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 3","termid":"PBO:0059917"}


id: MONDO:1012765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the CNGA1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, CNGA1-related, dog","secondary_identifiers":["OMIA:001977-9615"],"termid":"MONDO:1012765","xrefs":{"Monarch":{"xref_id":"1012765"}}}


id: PBO:0041195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB3 mitotic checkpoint protein pseudogene 1","termid":"PBO:0041195"}


id: PBO:0036111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_during_vegetative_growth","termid":"PBO:0036111"}


id: PBO:0079438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 6","termid":"PBO:0079438"}


id: PBO:0035732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_centromeric_chromatin_during_mitotic_G1_phase","termid":"PBO:0035732"}


id: MONDO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the opening between the bladder and the urethra resulting in the reduction or prevention of the urine flow from the bladder into the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder neck obstruction","secondary_identifiers":["DOID:13948","icd11.foundation:441939472","ICD10CM:N32.0","SCTID:399072004","MedDRA:10005053","EFO:1000840","MEDGEN:14151","MESH:D001748","UMLS:C0005694","ICD9:596.0"],"synonyms":[{"name":"obstruction of bladder neck or vesicourethral orifice","type":"exact"}],"termid":"MONDO:0006679","xrefs":{"Monarch":{"xref_id":"0006679"}}}


id: GO:0050661
data:
  {"annotated_genes":["SJAG_00972","SJAG_00027","SJAG_04032","SJAG_04810","SJAG_02488","SJAG_03115","SJAG_05015","SJAG_02297","SJAG_03828","SJAG_03903","SJAG_02148","SJAG_04608","SJAG_04270","SJAG_04652","SJAG_02945","SJAG_00636","SJAG_06622","SJAG_01198","SJAG_06621","SJAG_03476","SJAG_02135","SJAG_01162","SJAG_00234","SJAG_03852","SJAG_03152","SJAG_00660","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57603,58578,59732,60208,62712,62906,64636,64670,64945,65090,65938,68384,68472,70106,71345,80744,94451,104777,109722,109723,109726,109728,115109],"is_not":false,"summary":null,"term":"GO:0050661"},{"annotations":[58973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070401"},{"annotations":[103359,74725,115092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070402"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00972":null,"SJAG_01162":null,"SJAG_01198":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02488":null,"SJAG_02696":null,"SJAG_02945":null,"SJAG_03115":null,"SJAG_03152":null,"SJAG_03476":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04032":null,"SJAG_04270":null,"SJAG_04608":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_05015":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"NADP or NADPH binding","type":"related"},{"name":"NADP+ or NADPH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0050661","terms_by_termid":{"GO:0050661":null,"GO:0070401":null,"GO:0070402":null}}


id: PBO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 39B","termid":"PBO:0044753"}


id: PBO:0080980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 14","termid":"PBO:0080980"}


id: PR:Q9HFE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP16F5.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol-specific monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.08c","synonyms":[{"name":"Spom972h-SPBP16F5.08c","type":"exact"},{"name":"flavin-dependent monooxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE4"}


id: PBO:0091707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane CH-OH group oxidoreductase, human RTN4IP1 ortholog, implicated in mitochondrial organization or tethering","termid":"PBO:0091707"}


id: PBO:0067074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 105, pseudogene","termid":"PBO:0067074"}


id: PBO:0046238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 32","termid":"PBO:0046238"}


id: PBO:0086366
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alpha-1,3-mannosyltransferase; not required for protein O-glycosylation; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086366"}


id: MONDO:0700012
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  {"annotated_genes":["SJAG_01548","SJAG_03424"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86075,86074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 5 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700012","terms_by_termid":{"MONDO:0007925":null},"xrefs":{"Monarch":{"xref_id":"0700012"}}}


id: MONDO:0011798
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id: MONDO:0060589
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  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85580],"is_not":false,"summary":null,"term":"MONDO:0060589"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"facial palsy, congenital, with ptosis and velopharyngeal dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1623077","UMLS:C4540277","OMIM:617732"],"synonyms":[{"name":"FPVEPD","type":"related"},{"name":"facial palsy, congenital, with ptosis and velopharyngeal dysfunction","type":"exact"},{"name":"facial palsy, congenitla, with ptosis and velopharyngeal dysfunction","type":"exact"}],"termid":"MONDO:0060589","terms_by_termid":{"MONDO:0060589":null},"xrefs":{"Monarch":{"xref_id":"0060589"}}}


id: PBO:0048632
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 1","termid":"PBO:0048632"}


id: MONDO:0014713
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id: PBO:0090397
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Vps4","termid":"PBO:0090397"}


id: MONDO:0032819
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id: GO:0036516
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id: MONDO:0012525
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id: PBO:0000054
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  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh repeats","termid":"PBO:0000054"}


id: GO:0051346
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id: PBO:0051833
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 7","termid":"PBO:0051833"}


id: FYPO:0005919
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id: RO:0002107
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id: MONDO:1011829
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id: PBO:0060189
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id: PBO:0077517
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 232","termid":"PBO:0077517"}


id: PBO:0004383
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id: PBO:0016908
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id: MONDO:0006595
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id: MONDO:0003939
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id: GO:0043862
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arginine(out) + agmatine(in) = arginine(in) + agmatine(out).","definition_xrefs":["GOC:jl","PMID:17099215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"arginine:agmatine antiporter activity","synonyms":[{"name":"AdiC","type":"related"},{"name":"arginine-agmatine antiporter activity","type":"exact"},{"name":"arginine-agmatine exchange transporter activity","type":"exact"},{"name":"arginine/agmatine antiporter activity","type":"exact"}],"termid":"GO:0043862"}


id: MONDO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male genital organ stricture","secondary_identifiers":["MEDGEN:510240","DOID:12333","SCTID:198064007","UMLS:C0156316","ICD9:608.85"],"synonyms":[{"name":"stricture of male genital organs","type":"exact"}],"termid":"MONDO:0001496","xrefs":{"Monarch":{"xref_id":"0001496"}}}


id: PBO:0027698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mRNA_absent_from_cell","termid":"PBO:0027698"}


id: GO:1900060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:15302821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sphingolipid biosynthetic process","termid":"GO:0090155"},{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"negatively_regulates","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ceramide biosynthetic process","synonyms":[{"name":"down regulation of ceramide anabolism","type":"exact"},{"name":"down regulation of ceramide biosynthesis","type":"exact"},{"name":"down regulation of ceramide biosynthetic process","type":"related"},{"name":"down regulation of ceramide formation","type":"exact"},{"name":"down regulation of ceramide synthesis","type":"exact"},{"name":"down-regulation of ceramide anabolism","type":"exact"},{"name":"down-regulation of ceramide biosynthesis","type":"exact"},{"name":"down-regulation of ceramide biosynthetic process","type":"related"},{"name":"down-regulation of ceramide formation","type":"exact"},{"name":"down-regulation of ceramide synthesis","type":"exact"},{"name":"downregulation of ceramide anabolism","type":"exact"},{"name":"downregulation of ceramide biosynthesis","type":"exact"},{"name":"downregulation of ceramide biosynthetic process","type":"related"},{"name":"downregulation of ceramide formation","type":"exact"},{"name":"downregulation of ceramide synthesis","type":"exact"},{"name":"inhibition of ceramide anabolism","type":"exact"},{"name":"inhibition of ceramide biosynthesis","type":"exact"},{"name":"inhibition of ceramide biosynthetic process","type":"related"},{"name":"inhibition of ceramide formation","type":"exact"},{"name":"inhibition of ceramide synthesis","type":"exact"},{"name":"negative regulation of ceramide anabolism","type":"exact"},{"name":"negative regulation of ceramide biosynthesis","type":"exact"},{"name":"negative regulation of ceramide formation","type":"exact"},{"name":"negative regulation of ceramide synthesis","type":"exact"}],"termid":"GO:1900060"}


id: MONDO:0008306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cerebral amyloid angiopathy characterized by onset in the 4th to 6th decade of life, progressive mental deterioration, spasticity, muscular rigidity but no tremors, spontaneous movements or sensory changes that has material basis in an autosomal dominant mutation of ITM2B on chromosome 13q14.2.","definition_xrefs":["DOID:0070029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy","termid":"MONDO:0005620"},{"relation_name":"is_a","term_name":"ITM2B amyloidosis","termid":"MONDO:0018591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"ABri amyloidosis","secondary_identifiers":["icd11.foundation:1037669378","UMLS:C5190835","Orphanet:97345","ICD10EXP:E85.4+","GARD:8344","ICD10EXP:I68.0*","MESH:C538208","OMIM:176500","MEDGEN:1677186"],"synonyms":[{"name":"ABri amyloidosis","type":"exact"},{"name":"Bri amyloidosis","type":"related"},{"name":"FBD","type":"exact"},{"name":"ITM2B-related cerebral amyloid angiopathy 1","type":"related"},{"name":"cerebral amyloid angiopathy, British type","type":"exact"},{"name":"cerebral amyloid angiopathy, ITM2B-RELATED, 1","type":"related"},{"name":"cerebral amyloid angiopathy, ITM2B-related, type 1","type":"exact"},{"name":"dementia familial British","type":"related"},{"name":"dementia, familial British","type":"related"},{"name":"familial British dementia","type":"exact"},{"name":"familial dementia, British type","type":"exact"},{"name":"presenile dementia with spastic ataxia","type":"exact"}],"termid":"MONDO:0008306","xrefs":{"Monarch":{"xref_id":"0008306"}}}


id: MOD:01019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxymethylphenyl linker","synonyms":[{"name":"HMP","type":"exact"}],"termid":"MOD:01019"}


id: MONDO:0008357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by symmetric, nonopposable triphalangeal thumbs and radial hypoplasia. It has been described in eight patients (five females and three males) spanning generations of a family. The affected males also presented with hypospadias. The syndrome is inherited as an autosomal dominant trait.","definition_xrefs":["Orphanet:2252"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic urogenital tract malformation (obsolete MONDO:0015620)","termid":"MONDO:0015620"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial hypoplasia-triphalangeal thumbs-hypospadias-maxillary diastema syndrome","secondary_identifiers":["OMIM:179250","MEDGEN:357271","MESH:C536262","SCTID:716092007","UMLS:C1867397","GARD:258"],"synonyms":[{"name":"Schmitt Gillenwater Kelly syndrome","type":"exact"},{"name":"Schmitt-Gillenwater-Kelly syndrome","type":"exact"},{"name":"radial hypoplasia triphalangeal thumbs hypospadias maxillary diastema","type":"exact"},{"name":"radial hypoplasia, triphalangeal thumbs and hypospadias","type":"related"},{"name":"radial hypoplasia, triphalangeal thumbs, hypospadias, and maxillary diastema","type":"exact"}],"termid":"MONDO:0008357","xrefs":{"Monarch":{"xref_id":"0008357"}}}


id: MONDO:0005465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal mental state resulting from an abuse of methamphetamine","definition_xrefs":["EFO:0005242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"methamphetamine-induced psychosis","termid":"MONDO:0005465","xrefs":{"Monarch":{"xref_id":"0005465"}}}


id: MONDO:0018682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital insensitivity to pain with severe intellectual disability","secondary_identifiers":["MEDGEN:1814444","UMLS:C5679994","GARD:21890","Orphanet:453510"],"synonyms":[{"name":"congenital absence of pain with severe intellectual disability","type":"exact"},{"name":"congenital analgesia with severe intellectual disability","type":"exact"},{"name":"congenital insensitivity to pain with preserved temperature sensation","type":"exact"},{"name":"congenital insensitivity to pain with severe non-progressive cognitive delay","type":"exact"}],"termid":"MONDO:0018682","xrefs":{"Monarch":{"xref_id":"0018682"}}}


id: PBO:0013823
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CYR1","termid":"PBO:0013823"}


id: PATO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000259 visual_ability (obsolete PATO:0000259)","termid":"PATO:0000259"}


id: PBO:0005380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase involved in genome maintenance Pgp1","termid":"PBO:0005380"}


id: MONDO:0017334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"12q15q21.1 microdeletion syndrome is a rare chromosomal anomaly syndrome resulting from a partial deletion of the long arm of chromosome 12, with a highly variable phenotype, typically characterized by developmental delay, learning disability, intra-uterine and postnatal growth retardation, and mild facial dysmorphism that changes with age. Nasal speech and hypothyroidism are also associated.","definition_xrefs":["Orphanet:289513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 12","termid":"MONDO:0016877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"12q15q21.1 microdeletion syndrome","secondary_identifiers":["UMLS:C4518344","GARD:21141","MEDGEN:1383455","SCTID:734030009"],"synonyms":[{"name":"Del(12)(q15)(q21.1)","type":"exact"},{"name":"deletion 12q15q21.1","type":"exact"},{"name":"monosomy 12q15q21.1","type":"exact"}],"termid":"MONDO:0017334","xrefs":{"Monarch":{"xref_id":"0017334"}}}


id: GO:0031323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular metabolic process (obsolete GO:0031323)","synonyms":[{"name":"regulation of cellular metabolism","type":"exact"}],"termid":"GO:0031323"}


id: PR:O94293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.08 gene.","definition_xrefs":["UniProtKB:O94293","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C887.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.08","synonyms":[{"name":"Spom972h-SPBC887.08","type":"exact"}],"termid":"PR:O94293"}


id: GO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + N-acetylserotonin = S-adenosyl-L-homocysteine + melatonin. Melatonin is also known as N-acetyl-5-methoxytryptamine.","definition_xrefs":["EC:2.1.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"acetylserotonin O-methyltransferase activity","secondary_identifiers":["GO:0017097","MetaCyc:ACETYLSEROTONIN-O-METHYLTRANSFERASE-RXN","RHEA:15573"],"synonyms":[{"name":"N-acetylserotonin O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-acetylserotonin O-methyltransferase activity","type":"related"},{"name":"acetylserotonin methyltransferase activity","type":"related"},{"name":"hydroxyindole O-methyltransferase activity","type":"related"},{"name":"hydroxyindole methyltransferase activity","type":"related"}],"termid":"GO:0017096"}


id: PR:Q09688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug121 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 121 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.06c","synonyms":[{"name":"Spom972h-mug121","type":"exact"}],"termid":"PR:Q09688"}


id: PBO:0005412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit 1","termid":"PBO:0005412"}


id: PBO:0061015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGG1 interacting factor 3 like 1","termid":"PBO:0061015"}


id: RO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"has_input","termid":"RO:0002233"},{"relation_name":"is_a","term_name":"results_in_organization_of","termid":"RO:0002592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_remodeling_of","termid":"RO:0002591"}


id: PBO:0086709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; mRNA expression appears to be regulated by SUT1 and UPC2","termid":"PBO:0086709"}


id: GO:0008474
data:
  {"annotated_genes":["SJAG_00774","SJAG_02268","SJAG_00734","SJAG_02056","SJAG_03377"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61591,70499,80657,93862,101258],"is_not":false,"summary":null,"term":"GO:0008474"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-protein + H2O = palmitate + protein.","definition_xrefs":["EC:3.1.2.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"},{"relation_name":"is_a","term_name":"palmitoyl hydrolase activity","termid":"GO:0098599"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00734":null,"SJAG_00774":null,"SJAG_02056":null,"SJAG_02268":null,"SJAG_03377":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203613","Reactome:R-HSA-5690517","Reactome:R-HSA-8933328","RHEA:19233","Reactome:R-HSA-9647994","MetaCyc:3.1.2.22-RXN"],"synonyms":[{"name":"palmitoyl-[protein] hydrolase","type":"broad"},{"name":"palmitoyl-protein hydrolase activity","type":"exact"},{"name":"palmitoyl-protein thioesterase activity","type":"exact"},{"name":"palmitoyl-protein thiolesterase activity","type":"exact"}],"termid":"GO:0008474","terms_by_termid":{"GO:0008474":null}}


id: PBO:0088904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12","termid":"PBO:0088904"}


id: PBO:0080982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 17","termid":"PBO:0080982"}


id: GO:0010876
data:
  {"annotated_genes":["SJAG_02957","SJAG_00018","SJAG_03172","SJAG_02943","SJAG_00587","SJAG_01329","SJAG_01731","SJAG_04413","SJAG_03718","SJAG_03416","SJAG_00355","SJAG_01225","SJAG_04370","SJAG_06440","SJAG_03741","SJAG_03690","SJAG_03774","SJAG_03746","SJAG_00176","SJAG_00589","SJAG_03710","SJAG_05268","SJAG_02114","SJAG_01305","SJAG_02581","SJAG_01437","SJAG_03338","SJAG_01470","SJAG_01722","SJAG_00230","SJAG_16459","SJAG_02736","SJAG_03050","SJAG_05209","SJAG_01229","SJAG_01407","SJAG_00576","SJAG_02323","SJAG_01945","SJAG_00669","SJAG_01590","SJAG_03851","SJAG_00261","SJAG_00405","SJAG_02516","SJAG_01095","SJAG_01116","SJAG_03209","SJAG_04734","SJAG_03721","SJAG_02132","SJAG_02897","SJAG_02375"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68941],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140331"},{"annotations":[75119],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0015917"},{"annotations":[117813,73909,73695,109930,73249,74630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035621"},{"annotations":[77351,94760],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034203"},{"annotations":[116519,102928,109674,108517,111636,57480,94583],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120009"},{"annotations":[97821,107834,116542,104360,101603,107057,91241,100849,97882,89569,107960,109836,106170,98956,108965],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120010"},{"annotations":[106648],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120011"},{"annotations":[62350,72330,77308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032366"},{"annotations":[103236,117226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140043"},{"annotations":[73209,60040,90858,73371,72480,90857,109822,75138,74880,90865,90864,99799,90861,62827,102534,90859,90860,90862,101605,90863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045332"},{"annotations":[73547],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0017121"},{"annotations":[94586,102930,109676,108520,111638,116522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"Any process in which a lipid is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00176":null,"SJAG_00230":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00405":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01116":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02736":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03690":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03774":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipid localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"lipid localisation","type":"exact"}],"termid":"GO:0010876","terms_by_termid":{"GO:0015917":null,"GO:0015918":null,"GO:0017121":null,"GO:0032366":null,"GO:0034203":null,"GO:0035621":null,"GO:0045332":null,"GO:0120009":null,"GO:0120010":null,"GO:0120011":null,"GO:0140043":null,"GO:0140331":null}}


id: MONDO:0044720
data:
  {"annotated_genes":["SJAG_00863"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86808],"is_not":false,"summary":null,"term":"MONDO:0044720"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia with neuropathy and bilateral vestibular areflexia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614575","GARD:17937","MEDGEN:482853","Orphanet:504476","UMLS:C3281223"],"synonyms":[{"name":"CABV syndrome","type":"exact"},{"name":"CANVAS","type":"exact"},{"name":"cerebellar ataxia with bilateral vestibulopathy syndrome","type":"exact"},{"name":"cerebellar ataxia, neuropathy, and vestibular areflexia syndrome","type":"exact"}],"termid":"MONDO:0044720","terms_by_termid":{"MONDO:0044720":null},"xrefs":{"Monarch":{"xref_id":"0044720"}}}


id: MONDO:0009545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","secondary_identifiers":["MESH:C537721","OMIM:248010","MEDGEN:419847","UMLS:C2931597"],"synonyms":[{"name":"Macroepiphyseal dysplasia, McAlister coe type","type":"related"},{"name":"McAlister coe Whyte syndrome","type":"related"},{"name":"macroepiphyseal dysplasia with osteoporosis, wrinkled skin, and aged appearance","type":"exact"}],"termid":"MONDO:0009545","xrefs":{"Monarch":{"xref_id":"0009545"}}}


id: PBO:0054722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2131","termid":"PBO:0054722"}


id: GO:0003099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which increases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:0003099"}


id: GO:0050005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA = 3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA + H2O.","definition_xrefs":["RHEA:24144","EC:4.2.1.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"isohexenylglutaconyl-CoA hydratase activity","secondary_identifiers":["KEGG_REACTION:R03493","MetaCyc:ISOHEXENYLGLUTACONYL-COA-HYDRATASE-RXN","UM-BBD_reactionID:r1167"],"synonyms":[{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase [3-(4-methylpent-3-en-1-yl)pent-2-enedioyl-CoA-forming]","type":"related"},{"name":"3-hydroxy-3-(4-methylpent-3-en-1-yl)glutaryl-CoA hydro-lyase activity","type":"related"},{"name":"3-hydroxy-3-isohexenylglutaryl-CoA-hydrolase activity","type":"related"},{"name":"beta-isohexenylglutaconyl-CoA-hydratase activity","type":"related"},{"name":"isohexenylglutaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050005"}


id: PBO:0078488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 7-2","termid":"PBO:0078488"}


id: GO:0019811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cocaine (2-beta-carbomethoxy-3-beta-benzoxytropane), an alkaloid obtained from dried leaves of the South American shrub Erythroxylon coca or by chemical synthesis.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cocaine binding","termid":"GO:0019811"}


id: GO:1904629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:19765580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diterpene","termid":"GO:1904629"}


id: MONDO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute lymphoblastic leukemia of T-cell origin occurring in children.","definition_xrefs":["NCIT:C7953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"childhood acute lymphoblastic leukemia","termid":"MONDO:0000870"},{"relation_name":"is_a","term_name":"childhood precursor T-lymphoblastic lymphoma/leukemia","termid":"MONDO:0004403"},{"relation_name":"is_a","term_name":"T-cell acute lymphoblastic leukemia","termid":"MONDO:0004963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"T-cell childhood acute lymphocytic leukemia","secondary_identifiers":["DOID:0080145","MEDGEN:75996","UMLS:C0279583","EFO:1001947"],"synonyms":[{"name":"T acute lymphoblastic leukaemia","type":"broad"},{"name":"T acute lymphoblastic leukemia","type":"broad"},{"name":"T-cell childhood ALL","type":"exact"},{"name":"T-cell childhood acute lymphoblastic leukaemia","type":"exact"},{"name":"T-cell childhood acute lymphoblastic leukemia","type":"exact"},{"name":"T-cell childhood acute lymphocytic leukemia","type":"exact"},{"name":"T-cell paediatric ALL","type":"exact"},{"name":"T-cell paediatric acute lymphoblastic leukaemia","type":"exact"},{"name":"T-cell paediatric acute lymphocytic leukaemia","type":"exact"},{"name":"T-cell pediatric ALL","type":"exact"},{"name":"T-cell pediatric acute lymphoblastic leukemia","type":"exact"},{"name":"T-cell pediatric acute lymphocytic leukemia","type":"exact"},{"name":"childhood T acute lymphoblastic leukaemia","type":"exact"},{"name":"childhood T acute lymphoblastic leukemia","type":"exact"},{"name":"childhood T-ALL","type":"exact"},{"name":"childhood T-cell acute lymphoblastic leukaemia","type":"exact"},{"name":"childhood T-cell acute lymphoblastic leukemia","type":"exact"},{"name":"childhood precursor T-lymphoblastic leukaemia","type":"exact"},{"name":"childhood precursor T-lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0000871","xrefs":{"Monarch":{"xref_id":"0000871"}}}


id: PR:O42893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ntp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutral trehalase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.07","synonyms":[{"name":"Spom972h-ntp1","type":"exact"},{"name":"alpha,alpha-trehalase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha,alpha-trehalose glucohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42893"}


id: MONDO:0002594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by an Orthopoxvirus, which is transmitted by primates or rodents, and which is characterized by a prodromal syndrome of fever, chills, headache, myalgia, and lymphedema; initial symptoms are followed by a generalized papular rash that typically progresses from vesiculation through crusting over the course of two weeks.","definition_xrefs":["NCIT:C128421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monkeypox","secondary_identifiers":["MEDGEN:124442","SCTID:359814004","UMLS:C0276180","ICD9:136.8","ICD9:059.01","ICD10CM:B04","MESH:D045908","DOID:3292"],"synonyms":[{"name":"Monkeypox virus infection","type":"exact"},{"name":"infections, Monkeypox virus","type":"related"}],"termid":"MONDO:0002594","xrefs":{"Monarch":{"xref_id":"0002594"}}}


id: MONDO:0030625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskinesia with orofacial involvement","termid":"MONDO:0031115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement, autosomal recessive","secondary_identifiers":["OMIM:619647","MEDGEN:1794246","UMLS:C5562036"],"synonyms":[{"name":"DSKOR","type":"exact"},{"name":"dyskinesia with orofacial involvement, autosomal recessive","type":"exact"}],"termid":"MONDO:0030625","xrefs":{"Monarch":{"xref_id":"0030625"}}}


id: PBO:0066885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 185","termid":"PBO:0066885"}


id: GO:0015918
data:
  {"annotated_genes":["SJAG_03718","SJAG_01407","SJAG_01590","SJAG_01722","SJAG_02323","SJAG_00261","SJAG_00355","SJAG_01329","SJAG_02375"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94586,102930,108520,109676,111638,116522],"is_not":false,"summary":null,"term":"GO:0015918"},{"annotations":[106648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[62350,72330,77308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"}]},"cv_name":"biological_process","definition":"The directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sterol transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015918","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null}}


id: GO:0061473
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate (murein tripeptide) + H2O = L-alanyl-D-glutamate + meso-2,6-diaminoheptanedioate.","definition_xrefs":["RHEA:28398","PMID:22970852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallocarboxypeptidase activity","termid":"GO:0004181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0008233","GO:0140096","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"murein tripeptide carboxypeptidase activity","termid":"GO:0061473"}


id: GO:0008811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chloramphenicol + acetyl-CoA = chloramphenicol 3-acetate + CoA.","definition_xrefs":["EC:2.3.1.28","RHEA:18421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"chloramphenicol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03065","MetaCyc:CHLORAMPHENICOL-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"CAT I","type":"related"},{"name":"CAT II","type":"related"},{"name":"CAT III","type":"related"},{"name":"acetyl-CoA:chloramphenicol 3-O-acetyltransferase activity","type":"related"},{"name":"chloramphenicol acetylase activity","type":"related"},{"name":"chloramphenicol acetyltransferase activity","type":"related"},{"name":"chloramphenicol transacetylase activity","type":"related"}],"termid":"GO:0008811"}


id: PBO:0016940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug74","termid":"PBO:0016940"}


id: RO:0002584
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part_structure_that_is_capable_of","termid":"RO:0002584"}


id: GO:0046808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Antigenically dense structures located at the periphery of nuclei, close to but not abutting nuclear membranes. Assemblons contain the proteins for immature-capsid assembly; they are located at the periphery of a diffuse structure composed of proteins involved in DNA synthesis, which overlaps only minimally with the assemblons. More than one site can be present simultaneously.","definition_xrefs":["PMID:8676489"],"gene_count":0,"genotype_count":0,"name":"obsolete assemblon (obsolete GO:0046808)","termid":"GO:0046808"}


id: PBO:0057069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 150","termid":"PBO:0057069"}


id: PBO:0091145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-mannosyltransferase II complex subunit Pga1","termid":"PBO:0091145"}


id: GO:0102052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: indole-3-acetate + L-proline + ATP(4-) = H+ + indole-3-acetyl-proline + AMP(2-) + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete indole-3-acetyl-proline synthetase activity (obsolete GO:0102052)","termid":"GO:0102052"}


id: MONDO:1012483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exercise-induced pulmonary hemorrhage, non-human animal","termid":"MONDO:1011704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exercise-induced pulmonary hemorrhage, horse","secondary_identifiers":["OMIA:001896-9796"],"termid":"MONDO:1012483","xrefs":{"Monarch":{"xref_id":"1012483"}}}


id: GO:1903246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","PMID:17242280","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903246)","synonyms":[{"name":"down regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"down-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"downregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"negative regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903246"}


id: GO:0032151
data:
  {"annotated_genes":["SJAG_01277","SJAG_04375","SJAG_03374","SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98223,100437,101279,104236],"is_not":false,"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A heterooligomeric septin complex that acts during mitotic cell division.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin complex","termid":"GO:0031105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_03374":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitotic septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032151","terms_by_termid":{"GO:0032151":null}}


id: MONDO:1011094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospadias that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias, non-human animal","termid":"MONDO:1010269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias, goat","secondary_identifiers":["OMIA:001187-9925"],"termid":"MONDO:1011094","xrefs":{"Monarch":{"xref_id":"1011094"}}}


id: MONDO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete halo nevi (obsolete MONDO:0009322)","secondary_identifiers":["OMIM:234300"],"termid":"MONDO:0009322","xrefs":{"Monarch":{"xref_id":"0009322"}}}


id: PBO:0031203
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cisplatin","termid":"PBO:0031203"}


id: MONDO:0011968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2D (LGMD2D) is a subtype of autosomal recessive limb-girdle muscular dystrophy characterized by childhood onset of progressive proximal weakness of the shoulder and pelvic girdle muscles, resulting in difficulty walking, scapular winging, calf hypertrophy and contractures of the Achilles tendon, which lead to a tiptoe gait pattern. Cardiac and respiratory involvement is rare.","definition_xrefs":["Orphanet:62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-sarcoglycan","termid":"MONDO:0016141"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2D","secondary_identifiers":["DOID:0110278","SCTID:715340002","OMIM:608099","MEDGEN:424706","UMLS:C2936332","NCIT:C142081","GARD:438"],"synonyms":[{"name":"Adhalinopathy, primary","type":"related"},{"name":"Alpha-sarcoglycanopathy","type":"exact"},{"name":"DMDA2","type":"exact"},{"name":"Duchenne-like autosomal recessive muscular dystrophy type 2","type":"exact"},{"name":"Duchenne-like autosomal recessive muscular dystrophy, type 2","type":"related"},{"name":"LGMD2D","type":"exact"},{"name":"SGCA autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in SGCA","type":"exact"},{"name":"limb-girdle muscular dystrophy due to alpha-sarcoglycan deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2D","type":"exact"},{"name":"limb-girdle muscular dystrophy, type 2D","type":"related"},{"name":"muscular dystrophy limb-girdle with alpha-sarcoglycan","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 3","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2D","type":"exact"},{"name":"primary adhalinopathy","type":"exact"}],"termid":"MONDO:0011968","xrefs":{"Monarch":{"xref_id":"0011968"}}}


id: GO:0043307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a eosinophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte activation","termid":"GO:0036230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil activation","termid":"GO:0043307"}


id: PBO:0087864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of oleate genes; regulates genes involved in fatty acid utilization; zinc cluster protein; deletion confers sensitivity to Calcufluor white, and prevents growth on glycerol or lactate as sole carbon source","termid":"PBO:0087864"}


id: GO:0019683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glyceraldehyde-3-phosphate, an important intermediate in glycolysis.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate catabolic process","synonyms":[{"name":"glyceraldehyde 3-phosphate catabolic process","type":"exact"},{"name":"glyceraldehyde 3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate breakdown","type":"exact"},{"name":"glyceraldehyde-3-phosphate catabolism","type":"exact"},{"name":"glyceraldehyde-3-phosphate degradation","type":"exact"}],"termid":"GO:0019683"}


id: PBO:0029134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell","termid":"PBO:0029134"}


id: PBO:0086723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene; interacts genetically with CHS5, a gene involved in chitin biosynthesis","termid":"PBO:0086723"}


id: GO:1901707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to leptomycin B.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid binding","termid":"GO:0005504"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"leptomycin B binding","termid":"GO:1901707"}


id: PR:P56523
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr3 gene.","definition_xrefs":["UniProtKB:P56523","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase clr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.03","synonyms":[{"name":"Spom972h-clr3","type":"exact"},{"name":"cryptic loci regulator 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56523"}


id: SO:0001355
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methoxyuridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxyuridine","secondary_identifiers":["RNAMOD:063"],"synonyms":[{"name":"5-methoxyuridine","type":"exact"},{"name":"five methoxyuridine","type":"exact"},{"name":"mo5U","type":"exact"}],"termid":"SO:0001355"}


id: GO:0046402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the O side chain of a lipopolysaccharide, which determines the antigenic specificity of the organism. It is made up of about 50 repeating units of a branched tetrasaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"O antigen metabolic process","synonyms":[{"name":"O antigen metabolism","type":"exact"}],"termid":"GO:0046402"}


id: FYPO:0007709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of a non-growing cell tip is decreased.","definition_xrefs":["PomBase:mah","PMID:23093943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of non-growing cell tip","synonyms":[{"name":"decreased protein localisation to cell cortex of non-growing cell tip","type":"exact"},{"name":"decreased protein localization to cell cortex of new non-growing cell tip","type":"exact"},{"name":"decreased protein localization to cell cortex of non-growing cell end","type":"exact"},{"name":"decreased protein localization to cell cortex of non-growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell cortex of non-growing cell tip during vegetative growth","type":"exact"},{"name":"decreased protein localization to non-growing cell tip cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of non-growing cell tip","type":"exact"}],"termid":"FYPO:0007709"}


id: PBO:0014273
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUppressor of Cdc2 ts-mutations","termid":"PBO:0014273"}


id: PBO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with LSB1 cooperatively inhibits the nucleation of actin filaments; short-lived protein whose levels increase in response to thermal stress; induces the formation of the [PIN+] and [RNQ+] prions when overproduced; PIN3 has a paralog, LSB1, that arose from the whole genome duplication","termid":"PBO:0085001"}


id: PBO:0079887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B pseudogene 1","termid":"PBO:0079887"}


id: PR:Q9HGM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04078","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.06c","secondary_identifiers":["UniProtKB:Q9HGM5"],"synonyms":[{"name":"Spom972h-DDX49","type":"exact"}],"termid":"PR:Q9HGM5"}


id: PBO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L7","termid":"PBO:0002045"}


id: PATO:0000872
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000872 anxious (obsolete PATO:0000872)","termid":"PATO:0000872"}


id: PBO:0085707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in shmoo formation and bipolar bud site selection; localizes to sites of polarized growth in a cell cycle dependent- and Spa2p-dependent manner, interacts with MAPKKs Mkk1p, Mkk2p, and Ste7p; SPH1 has a paralog, SPA2, that arose from the whole genome duplication","termid":"PBO:0085707"}


id: PBO:0043189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4","termid":"PBO:0043189"}


id: GO:0060456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of a digestive system process, a physical, chemical, or biochemical process carried out by living organisms to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"digestive system process","termid":"GO:0022600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of digestive system process","termid":"GO:0060456"}


id: PBO:0004777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur protein Isa2","termid":"PBO:0004777"}


id: PBO:0040609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromo adjacent homology domain containing 1","termid":"PBO:0040609"}


id: GO:0004021
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111544],"is_not":false,"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.","definition_xrefs":["RHEA:19453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine-oxo-acid transaminase activity","termid":"GO:0047635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"L-alanine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70523","MetaCyc:ALANINE-AMINOTRANSFERASE-RXN","EC:2.6.1.2","Reactome:R-HSA-70524","Reactome:R-HSA-507775","KEGG_REACTION:R00258","Reactome:R-HSA-507749"],"synonyms":[{"name":"ALT","type":"related"},{"name":"GPT","type":"related"},{"name":"L-alanine aminotransferase activity","type":"broad"},{"name":"L-alanine transaminase activity","type":"broad"},{"name":"L-alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine aminotransferase activity","type":"broad"},{"name":"alanine transaminase activity","type":"broad"},{"name":"alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine-pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine aminotransferase","type":"broad"},{"name":"glutamic acid-pyruvic acid transaminase activity","type":"related"},{"name":"glutamic--alanine transaminase activity","type":"related"},{"name":"glutamic--pyruvic transaminase activity","type":"related"},{"name":"glutamic-pyruvic aminotransferase activity","type":"related"},{"name":"pyruvate transaminase activity","type":"broad"},{"name":"pyruvate-alanine aminotransferase activity","type":"related"},{"name":"pyruvate-glutamate transaminase activity","type":"related"}],"termid":"GO:0004021","terms_by_termid":{"GO:0004021":null}}


id: GO:0170005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of cyclic nucleotide phosphodiesterase.","definition_xrefs":["PMID:6259174","PMID:6087882","PMID:6667031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"positively_regulates","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"positively_regulates","termid":"GO:0003824"},{"rel_name":"positively_regulates","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"positively_regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0016787"},{"rel_name":"regulates","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0030234","GO:0003824","GO:0016788","GO:0016787","GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide phosphodiesterase activator activity","termid":"GO:0170005"}


id: PBO:0076931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor EB","termid":"PBO:0076931"}


id: GO:0010928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of auxin mediated signaling pathway","synonyms":[{"name":"regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010928"}


id: PBO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase (predicted)","termid":"PBO:0001982"}


id: MONDO:0014128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic craniosynostosis in which the cause of the disease is a mutation in the TCF12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:23354436"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated plagiocephaly (obsolete MONDO:0018113)","termid":"MONDO:0018113"},{"relation_name":"excluded_subClassOf","term_name":"obsolete isolated brachycephaly (obsolete MONDO:0018114)","termid":"MONDO:0018114"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"TCF12-related craniosynostosis","secondary_identifiers":["OMIM:615314","MEDGEN:811568","UMLS:C3715051","GARD:18047","Orphanet:672979"],"synonyms":[{"name":"CRS3","type":"related"},{"name":"TCF12 craniosynostosis","type":"exact"},{"name":"TCF12-related craniosynostosis","type":"exact"},{"name":"craniosynostosis 3","type":"exact"},{"name":"craniosynostosis caused by mutation in TCF12","type":"exact"},{"name":"craniosynostosis type 3","type":"exact"}],"termid":"MONDO:0014128","xrefs":{"Monarch":{"xref_id":"0014128"}}}


id: PR:Q69Z14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma9 gene.","definition_xrefs":["UniProtKB:Q69Z14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.16","synonyms":[{"name":"Spom972h-vma9","type":"exact"},{"name":"V-ATPase subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit e (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q69Z14"}


id: PBO:0068039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 344","termid":"PBO:0068039"}


id: GO:0009526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The double lipid bilayer enclosing a plastid and separating its contents from the rest of the cytoplasm; includes the intermembrane space.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope","termid":"GO:0031967"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid envelope","termid":"GO:0009526"}


id: GO:0019471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline. The presence of hydroxyproline is essential to produce stable triple helical tropocollagen, hence the problems caused by ascorbate deficiency in scurvy. This unusual amino acid is also present in considerable amounts in the major glycoprotein of primary plant cell walls.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyproline metabolic process","synonyms":[{"name":"4-hydroxyproline metabolism","type":"exact"}],"termid":"GO:0019471"}


id: MONDO:0010622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genodermatosis belonging to the Mendelian Disorders of Cornification (MeDOC) and characterized by generalized hyperkeratosis and scaling of the skin.","definition_xrefs":["Orphanet:461"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"excluded_subClassOf","term_name":"ichthyosis","termid":"MONDO:0019269"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"sterol metabolism disorder","termid":"MONDO:0019256"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0005093"],"is_obsolete":false,"name":"recessive X-linked ichthyosis","secondary_identifiers":["GARD:7904","NORD:1293","SCTID:3944006","NCIT:C84779","NANDO:1200625","MEDGEN:86937","MedDRA:10048063","DOID:1700","OMIM:308100","DECIPHER:27","UMLS:C0079588","icd11.foundation:1466487054"],"synonyms":[{"name":"Ichthyosis, X Linked","type":"exact"},{"name":"RXLI","type":"exact"},{"name":"SSDD","type":"related"},{"name":"STS deficiency","type":"related"},{"name":"X linked ichthyosis","type":"related"},{"name":"X-linked ichthyosis","type":"exact"},{"name":"X-linked ichthyosis with steryl-sulphatase deficiency","type":"exact"},{"name":"X-linked placental steryl-sulphatase deficiency","type":"exact"},{"name":"X-linked recessive ichthyosis","type":"exact"},{"name":"XLI","type":"exact"},{"name":"ichthyosis (disease), X-linked","type":"exact"},{"name":"ichthyosis , X-linked, X-linked recessive","type":"exact"},{"name":"ichthyosis, X-linked","type":"related"},{"name":"ichthyosis, X-linked, complicated","type":"related"},{"name":"placental steroid sulfatase deficiency","type":"related"},{"name":"recessive X-linked ichthyosis","type":"exact"},{"name":"steroid sulfatase deficiency","type":"exact"},{"name":"steroid sulfatase deficiency disease","type":"related"}],"termid":"MONDO:0010622","xrefs":{"Monarch":{"xref_id":"0010622"}}}


id: PBO:0017414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-preceded_by","termid":"PBO:0017414"}


id: MONDO:0013456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megaloblastic anemia","termid":"MONDO:0001700"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"constitutional megaloblastic anemia with severe neurologic disease","secondary_identifiers":["MEDGEN:462555","GARD:11000","OMIM:613839","UMLS:C3151205","MESH:C565095","Orphanet:319651","SCTID:124178006"],"synonyms":[{"name":"DHFR deficiency","type":"exact"},{"name":"dihydrofolate reductase deficiency","type":"exact"},{"name":"megaloblastic anaemia due to dihydrofolate reductase deficiency","type":"related"},{"name":"megaloblastic anemia due to dihydrofolate reductase deficiency","type":"related"}],"termid":"MONDO:0013456","xrefs":{"Monarch":{"xref_id":"0013456"}}}


id: PBO:0074786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 7","termid":"PBO:0074786"}


id: MONDO:0011097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Axenfeld-Rieger syndrome that has material basis in deletions in the region 13q14.","definition_xrefs":["DOID:0110121","PMID:8751862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Axenfeld-Rieger syndrome","termid":"MONDO:0019187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Axenfeld-Rieger syndrome type 2","secondary_identifiers":["MEDGEN:316937","GARD:10517","MESH:C535680","UMLS:C1832229","OMIM:601499"],"synonyms":[{"name":"Axenfeld-Rieger syndrome, type 2","type":"related"},{"name":"RIEG2","type":"exact"},{"name":"Rieger syndrome type 2","type":"exact"},{"name":"Rieger syndrome, type 2","type":"related"}],"termid":"MONDO:0011097","xrefs":{"Monarch":{"xref_id":"0011097"}}}


id: PBO:0087913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in phospholipid synthesis; required for derepression of inositol-choline-regulated genes involved in phospholipid synthesis; forms a complex, with Ino2p, that binds the inositol-choline-responsive element through a basic helix-loop-helix domain","termid":"PBO:0087913"}


id: MONDO:0016534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypophysitis","termid":"MONDO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"infundibulo-neurohypophysitis","secondary_identifiers":["UMLS:C5190834","Orphanet:238305","GARD:20632","MEDGEN:1683829"],"termid":"MONDO:0016534","xrefs":{"Monarch":{"xref_id":"0016534"}}}


id: PBO:0046807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor X","termid":"PBO:0046807"}


id: PBO:0085108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear thiol peroxidase; functions as an alkyl-hydroperoxide reductase during post-diauxic growth","termid":"PBO:0085108"}


id: PBO:0057418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548t","termid":"PBO:0057418"}


id: MONDO:0010707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Paine syndrome","secondary_identifiers":["MEDGEN:234691","UMLS:C1412041","MESH:C538101","OMIM:311400"],"synonyms":[{"name":"Paine syndrome","type":"exact"},{"name":"Seemanova syndrome 1","type":"related"},{"name":"microcephaly with spastic diplegia","type":"related"}],"termid":"MONDO:0010707","xrefs":{"Monarch":{"xref_id":"0010707"}}}


id: GO:0044562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts the activity of a  voltage-gated potassium channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of voltage-gated potassium channel activity","termid":"GO:0044559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated inhibition of voltage-gated potassium channel activity","synonyms":[{"name":"envenomation resulting in negative regulation of voltage-gated potassium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in negative regulation of voltage-gated potassium channel activity in other organism","type":"exact"}],"termid":"GO:0044562"}


id: PBO:0041389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 52","termid":"PBO:0041389"}


id: SO:0002079
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the splice region of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_splice_region_variant","synonyms":[{"name":"incomplete transcript splice region variant","type":"exact"}],"termid":"SO:0002079"}


id: PBO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3-containing 90S preribosome complex subunit Cms1 (predicted)","termid":"PBO:0008880"}


id: PBO:0068806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 43, pseudogene","termid":"PBO:0068806"}


id: FYPO:0001040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of thiamine diphosphokinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal thiamine diphosphokinase activity","termid":"FYPO:0001039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased thiamine diphosphokinase activity","synonyms":[{"name":"reduced thiamine diphosphokinase activity","type":"exact"}],"termid":"FYPO:0001040"}


id: GO:0007336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete bilateral process (obsolete GO:0007336)","synonyms":[{"name":"bilateral process","type":"exact"}],"termid":"GO:0007336"}


id: PBO:0061301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural proliferation, differentiation and control 1","termid":"PBO:0061301"}


id: FYPO:0007493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of alpha-D-glucan measured in the spore wall is lower than normal.","definition_xrefs":["PMID:16420355","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall alpha-glucan level","termid":"FYPO:0001081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0002946"],"is_obsolete":false,"name":"decreased ascospore wall alpha-glucan level","synonyms":[{"name":"decreased ascospore wall alpha-D-glucan level","type":"exact"},{"name":"decreased ascospore wall alpha-glucan accumulation","type":"related"},{"name":"decreased ascospore wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"decreased ascospore wall alpha-glucan level during vegetative growth","type":"exact"},{"name":"decreased spore wall alpha-glucan level","type":"exact"},{"name":"reduced ascospore wall alpha-glucan level","type":"exact"}],"termid":"FYPO:0007493"}


id: MONDO:0014133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by seizure onset in the first weeks or months of life, delayed or regression of psychomotor development, and hypotonia that has material basis in homozygous or compound heterozygous mutation in the TBC1D24 gene on chromosome 16p13.","definition_xrefs":["DOID:0080449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant migrating partial seizures of infancy","termid":"MONDO:0017385"},{"relation_name":"is_a","term_name":"neonatal-onset developmental and epileptic encephalopathy","termid":"MONDO:0100455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 16","secondary_identifiers":["GARD:15945","OMIM:615338","UMLS:C3809173","MEDGEN:815503"],"synonyms":[{"name":"DEE16","type":"exact"},{"name":"EIEE16","type":"exact"},{"name":"developmental and epileptic encephalopathy 16","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 16","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 16","type":"exact"}],"termid":"MONDO:0014133","xrefs":{"Monarch":{"xref_id":"0014133"}}}


id: MONDO:0020396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anomaly of the tricuspid valve chordae is a rare, congenital anomaly of the tricuspid subvalvular apparatus characterized by aberrant tendinous chords, which insert at the clear zone of the leaflet instead of its free edge and connect to the endocardium instead of the papillary muscles. Resulting tethering of one or more tricuspid leaflets leads to their impaired mobility and tricuspid regurgitation. Association with other congenital cardiac anomalies has been reported.","definition_xrefs":["Orphanet:99055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"anomaly of the tricuspid valve chordae","secondary_identifiers":["UMLS:C3165162","GARD:19623","MEDGEN:757566"],"termid":"MONDO:0020396","xrefs":{"Monarch":{"xref_id":"0020396"}}}


id: PBO:0089963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Ncb2","termid":"PBO:0089963"}


id: PBO:0076518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 20","termid":"PBO:0076518"}


id: PBO:0065936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 2","termid":"PBO:0065936"}


id: PBO:0051904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 11","termid":"PBO:0051904"}


id: GO:0006240
data:
  {"annotated_genes":["SJAG_02874","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92778,95821,107572],"is_not":false,"summary":null,"term":"GO:0006240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009197"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCDP metabolic process","termid":"GO:0046062"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCDP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dCDP anabolism","type":"exact"},{"name":"dCDP biosynthesis","type":"exact"},{"name":"dCDP formation","type":"exact"},{"name":"dCDP synthesis","type":"exact"}],"termid":"GO:0006240","terms_by_termid":{"GO:0006240":null}}


id: PR:O94464
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC23G7.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23G7.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.06c","synonyms":[{"name":"Spom972h-SPBC23G7.06c","type":"exact"}],"termid":"PR:O94464"}


id: PBO:0028786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_heterochromatin_assembly_at_protein_coding_gene","termid":"PBO:0028786"}


id: PBO:0071360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 19","termid":"PBO:0071360"}


id: MONDO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or borderline cystic epithelial neoplasm arising from the glandular epithelium. The epithelial cells line the cystic spaces which contain serous or mucinous fluid. Representative examples include ovarian and pancreatic cystadenomas.","definition_xrefs":["NCIT:C2972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"cystic neoplasm","termid":"MONDO:0021077"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystadenoma","secondary_identifiers":["UMLS:C0010633","MEDGEN:8221","ICDO:8440/0","MESH:D003537","DOID:2634"],"synonyms":[{"name":"cystadenoma","type":"exact"},{"name":"cystadenoma (morphologic abnormality)","type":"exact"},{"name":"cystadenoma, benign","type":"exact"},{"name":"cystoma","type":"exact"}],"termid":"MONDO:0002369","xrefs":{"Monarch":{"xref_id":"0002369"}}}


id: PBO:0078894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 5-1","termid":"PBO:0078894"}


id: PBO:0029542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_mixed_vegetative_cell_population_including_cell_with_normal_morphology_and_long_cells_(obsolete_FYPO:0002180)","termid":"PBO:0029542"}


id: PBO:0025528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-H ortholog Fta3","termid":"PBO:0025528"}


id: MONDO:0008502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sulfhemoglobinemia","termid":"MONDO:0006988"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sulfhemoglobinemia, congenital","secondary_identifiers":["UMLS:C1861437","MESH:C566102","OMIM:185460","MEDGEN:350024"],"synonyms":[{"name":"sulfhemoglobinemia, congenital","type":"exact"}],"termid":"MONDO:0008502","xrefs":{"Monarch":{"xref_id":"0008502"}}}


id: GO:0043461
data:
  {"annotated_genes":["SJAG_07008","SJAG_04450","SJAG_04899","SJAG_01838","SJAG_06135","SJAG_01503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110033,110453,89385,74491,78451,73850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting ATP synthase (also known as F-type ATPase), a two-sector ATPase found in the inner membrane of mitochondria and chloroplasts, and in bacterial plasma membranes.","definition_xrefs":["GOC:mah","PMID:29514954","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01503":null,"SJAG_01838":null,"SJAG_04450":null,"SJAG_04899":null,"SJAG_06135":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"proton-transporting ATP synthase complex assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"F-type ATPase complex assembly","type":"exact"}],"termid":"GO:0043461","terms_by_termid":{"GO:0033615":null}}


id: MONDO:0010118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"inherited threoninemia","secondary_identifiers":["UMLS:C1848861","MEDGEN:336439","OMIM:273770"],"synonyms":[{"name":"hyperthreoninemia","type":"broad"},{"name":"threoninemia","type":"exact"}],"termid":"MONDO:0010118","xrefs":{"Monarch":{"xref_id":"0010118"}}}


id: PBO:0113805
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peak copy number 100 at endocytic sites","termid":"PBO:0113805"}


id: GO:0008825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid = S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid.","definition_xrefs":["EC:2.1.1.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"cyclopropane-fatty-acyl-phospholipid synthase activity","secondary_identifiers":["MetaCyc:2.1.1.79-RXN","RHEA:11988"],"synonyms":[{"name":"CFA synthase activity","type":"related"},{"name":"S-adenosyl-L-methionine:unsaturated-phospholipid methyltransferase (cyclizing)","type":"related"},{"name":"cyclopropane fatty acid synthase activity","type":"related"},{"name":"cyclopropane fatty acid synthetase activity","type":"related"},{"name":"cyclopropane synthase activity","type":"related"},{"name":"cyclopropane synthetase activity","type":"broad"},{"name":"unsaturated-phospholipid methyltransferase activity","type":"broad"}],"termid":"GO:0008825"}


id: PBO:0035943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035943"}


id: GO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(1207) in 16S rRNA = N(2)-methylguanosine(1207) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"16S rRNA (guanine(1207)-N(2))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11576","RHEA:42736"],"synonyms":[{"name":"M(2)G1207 methyltransferase activity","type":"related"}],"termid":"GO:0052914"}


id: PBO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 7","termid":"PBO:0072130"}


id: PBO:0029706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_vegetative_cell_with_mislocalized_septum","termid":"PBO:0029706"}


id: MONDO:0017797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of odontogenic neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare odontologic tumor (obsolete MONDO:0017797)","secondary_identifiers":["Orphanet:314425"],"synonyms":[{"name":"rare odontogenic neoplasm","type":"exact"},{"name":"rare odontogenic tumor","type":"related"}],"termid":"MONDO:0017797","xrefs":{"Monarch":{"xref_id":"0017797"}}}


id: PBO:0047669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin adenine dinucleotide synthetase 1","termid":"PBO:0047669"}


id: GO:0090119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, or cholesterol-containing compounds, by membrane-bounded vesicles.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"cytosolic transport","termid":"GO:0016482"},{"relation_name":"is_a","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}


id: MONDO:0009159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ehlers-Danlos syndrome, cardiac valvular type is a form of Ehlers-Danlos syndrome characterized by soft skin, skin hyperextensibility, easy bruisability, atrophic scar formation, joint hypermobility and cardiac valvular defects comprising mitral and/or aortic valve insufficiency.","definition_xrefs":["Orphanet:230851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, cardiac valvular type","secondary_identifiers":["GARD:12613","MEDGEN:929458","MESH:C536200","SCTID:720858001","DOID:0080730","icd11.foundation:531375176","UMLS:C4303789","OMIM:225320"],"synonyms":[{"name":"Cardiac valvular form of Ehlers-Danlos syndrome","type":"related"},{"name":"Cardiac valvular form of autosomal recessive Ehlers-Danlos syndrome","type":"related"},{"name":"Cardiac-valvular EDS","type":"related"},{"name":"Cardiac-valvular Ehlers-Danlos syndrome","type":"related"},{"name":"EDS, cardiac valvular type","type":"exact"},{"name":"EDSCV","type":"related"},{"name":"Ehlers-Danlos syndrome, CARDIAC valvular type","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasis type","type":"related"},{"name":"Ehlers-Danlos syndrome, autosomal recessive, CARDIAC valvular form","type":"related"},{"name":"Ehlers-Danlos syndrome, autosomal recessive, Cardiac valvular form","type":"related"},{"name":"cvEDS","type":"related"}],"termid":"MONDO:0009159","xrefs":{"Monarch":{"xref_id":"0009159"}}}


id: PR:Q9Y7P1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ERO1-like protein alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04810","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERO1-like protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.14c","secondary_identifiers":["UniProtKB:Q9Y7P1"],"synonyms":[{"name":"Spom972h-ERO1L","type":"exact"},{"name":"endoplasmic reticulum oxidoreductin-1-like protein B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7P1"}


id: PBO:0002783
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively regulates sexual differentiation in nutrient rich conditions by repression of Ste11","termid":"PBO:0002783"}


id: GO:0102069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-hydroxy-alpha-humulene + NAD = zerumbone + NADH + H+.","definition_xrefs":["EC:1.1.1.326","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"zerumbone synthase activity","secondary_identifiers":["RHEA:32327","MetaCyc:RXN-10629"],"termid":"GO:0102069"}


id: PBO:0052159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ6 antisense RNA 1","termid":"PBO:0052159"}


id: MONDO:0030048
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85768],"is_not":false,"summary":null,"term":"MONDO:0030048"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"CPOX-related hereditary coproporphyria","termid":"MONDO:0800180"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0019142"],"is_obsolete":false,"name":"harderoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:659672","icd11.foundation:1664486132","OMIM:618892","MEDGEN:137981","UMLS:C0342859","MESH:C562816"],"synonyms":[{"name":"HARDEROPORPHYRIA","type":"exact"},{"name":"HARPO","type":"exact"},{"name":"harderoporphyria","type":"exact"}],"termid":"MONDO:0030048","terms_by_termid":{"MONDO:0030048":null},"xrefs":{"Monarch":{"xref_id":"0030048"}}}


id: GO:1903291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["PMID:10636900","GOC:rl","GO_REF:0000058","GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ATP catabolic process (obsolete GO:1903291)","synonyms":[{"name":"activation of ATP breakdown","type":"narrow"},{"name":"activation of ATP catabolic process","type":"narrow"},{"name":"activation of ATP catabolism","type":"narrow"},{"name":"activation of ATP degradation","type":"narrow"},{"name":"activation of ATP hydrolysis","type":"narrow"},{"name":"positive regulation of ATP breakdown","type":"exact"},{"name":"positive regulation of ATP catabolism","type":"exact"},{"name":"positive regulation of ATP degradation","type":"exact"},{"name":"positive regulation of ATP hydrolysis","type":"narrow"},{"name":"up regulation of ATP breakdown","type":"exact"},{"name":"up regulation of ATP catabolic process","type":"exact"},{"name":"up regulation of ATP catabolism","type":"exact"},{"name":"up regulation of ATP degradation","type":"exact"},{"name":"up regulation of ATP hydrolysis","type":"narrow"},{"name":"up-regulation of ATP breakdown","type":"exact"},{"name":"up-regulation of ATP catabolic process","type":"exact"},{"name":"up-regulation of ATP catabolism","type":"exact"},{"name":"up-regulation of ATP degradation","type":"exact"},{"name":"up-regulation of ATP hydrolysis","type":"narrow"},{"name":"upregulation of ATP breakdown","type":"exact"},{"name":"upregulation of ATP catabolic process","type":"exact"},{"name":"upregulation of ATP catabolism","type":"exact"},{"name":"upregulation of ATP degradation","type":"exact"},{"name":"upregulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903291"}


id: PBO:0080945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 1","termid":"PBO:0080945"}


id: PBO:0060634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolin pseudogene 1","termid":"PBO:0060634"}


id: PBO:0083466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene NAP1","termid":"PBO:0083466"}


id: PBO:0043098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 10","termid":"PBO:0043098"}


id: GO:0046142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving coenzymes and prosthetic groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of coenzyme and prosthetic group metabolic process (obsolete GO:0046142)","synonyms":[{"name":"negative regulation of coenzyme and prosthetic group metabolic process","type":"exact"}],"termid":"GO:0046142"}


id: SO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence alteration which includes an insertion or a deletion. This describes a sequence length change when the direction of the change is unspecified or when such changes are pooled into one category.","definition_xrefs":["ZFIN:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unspecified_indel","synonyms":[{"name":"insertion or deletion","type":"exact"},{"name":"unspecified indel","type":"exact"}],"termid":"SO:0002217"}


id: FYPO:0008217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA N-glycosylase activity is increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA N-glycosylase activity","termid":"FYPO:0008217"}


id: MONDO:0020281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease with pigmentary retinitis (obsolete MONDO:0020281)","secondary_identifiers":["Orphanet:98713"],"termid":"MONDO:0020281","xrefs":{"Monarch":{"xref_id":"0020281"}}}


id: FYPO:0008048
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in meiosis in which dimethylation of lysine at position 4 of histone H3 is increased at the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 dimethylation during meiosis","termid":"FYPO:0008049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K4 dimethylation at centromere during meiosis","termid":"FYPO:0008048"}


id: PBO:0052265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 3B","termid":"PBO:0052265"}


id: PBO:0087075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication","termid":"PBO:0087075"}


id: GO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell activation","termid":"GO:0046636"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"negatively_regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of alpha-beta T cell proliferation","synonyms":[{"name":"down regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"down-regulation of alpha-beta T cell proliferation","type":"exact"},{"name":"downregulation of alpha-beta T cell proliferation","type":"exact"},{"name":"inhibition of alpha-beta T cell proliferation","type":"narrow"},{"name":"negative regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"negative regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046642"}


id: GO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened contributing to the modulation of the frequency, rate or extent of cardioblast proliferation in the secondary heart field. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smoothened signaling pathway","termid":"GO:0007224"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"part_of","term_name":"regulation of secondary heart field cardioblast proliferation","termid":"GO:0003266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway involved in regulation of secondary heart field cardioblast proliferation","synonyms":[{"name":"hedgehog signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"hh signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signaling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"},{"name":"smoothened receptor signalling pathway involved in regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:0003271"}


id: PBO:0054188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1563","termid":"PBO:0054188"}


id: GO:0017000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibiotic biosynthetic process","synonyms":[{"name":"antibiotic anabolism","type":"exact"},{"name":"antibiotic biosynthesis","type":"exact"},{"name":"antibiotic formation","type":"exact"},{"name":"antibiotic synthesis","type":"exact"}],"termid":"GO:0017000"}


id: PBO:0013787
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimeric","termid":"PBO:0013787"}


id: MONDO:0007984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome is characterized by metaphyseal dysplasia associated with short stature and facial dysmorphism (a beaked nose, short philtrum, thin lips, maxillary hypoplasia, dystrophic yellowish teeth) and acral anomalies (short fifth metacarpals and/or short middle phalanges of fingers two and five). It has been described in several members spanning four generations of a French-Canadian family. The syndrome is likely to be transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome","secondary_identifiers":["OMIM:156510","UMLS:C3549874","GARD:3568","DOID:0111513","MEDGEN:762788"],"synonyms":[{"name":"MDMHB","type":"related"},{"name":"metaphyseal dysplasia maxillary hypoplasia brachydactyly","type":"related"},{"name":"metaphyseal dysplasia with maxillary hypoplasia with or without brachydactyly","type":"related"}],"termid":"MONDO:0007984","xrefs":{"Monarch":{"xref_id":"0007984"}}}


id: GO:1901777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mitomycin C.","definition_xrefs":["PMID:10099135","GOC:TermGenie","GOC:yaf","UniPathway:UPA00851","PMID:10094699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mitomycin C metabolic process","termid":"GO:1901775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"mitomycin C biosynthetic process","synonyms":[{"name":"mitomycin C anabolism","type":"exact"},{"name":"mitomycin C biosynthesis","type":"exact"},{"name":"mitomycin C formation","type":"exact"},{"name":"mitomycin C synthesis","type":"exact"}],"termid":"GO:1901777"}


id: GO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephric nephron over time, from its formation to the mature structure. A pronephric nephron is the functional unit of the pronephros.","definition_xrefs":["XAO:00002785","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron development","termid":"GO:0072006"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric nephron development","termid":"GO:0039019"}


id: PBO:0049607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 10","termid":"PBO:0049607"}


id: PBO:0047693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLVCR heme transporter 1","termid":"PBO:0047693"}


id: PR:P23636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P23636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major serine/threonine-protein phosphatase PP2A-2 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.07c","synonyms":[{"name":"Spom972h-ppa2","type":"exact"}],"termid":"PR:P23636"}


id: GO:0071819
data:
  {"annotated_genes":["SJAG_00087","SJAG_03752","SJAG_00641","SJAG_03599"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62154,88827,112054,114604],"is_not":false,"summary":null,"term":"GO:0071819"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of SAGA-type complexes SAGA and SLIK, and mediates deubiquitination of histone H2B. In S. cerevisiae, the DUBm consists of the proteins Ubp8p, Sgf11p, Sus1p, and Sgf73p.","definition_xrefs":["PMID:19226466","PMID:20395473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00641":null,"SJAG_03599":null,"SJAG_03752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DUBm complex","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"SAGA DUBm complex","type":"narrow"},{"name":"deubiquitinating module","type":"exact"},{"name":"deubiquitination module","type":"exact"}],"termid":"GO:0071819","terms_by_termid":{"GO:0071819":null}}


id: PBO:0004115
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.2.1.1","termid":"PBO:0004115"}


id: GO:0140859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + medicarpin = 4'-methoxyisoflavan-2',4,7-triol.","definition_xrefs":["PMID:7805842","RHEA:35407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"pterocarpan synthase activity","secondary_identifiers":["EC:4.2.1.139"],"synonyms":[{"name":"2',7-dihydroxy-4'-methoxyisoflavanol dehydratase activity","type":"exact"},{"name":"2'-hydroxyisoflavanol 4,2'-dehydratase activity","type":"exact"},{"name":"7,2'-dihydroxy-4'-methoxyisoflavanol dehydratase activity","type":"exact"},{"name":"medicarpan synthase activity","type":"exact"},{"name":"medicarpin synthase activity","type":"exact"}],"termid":"GO:0140859"}


id: MONDO:0017212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"choroiditis","termid":"MONDO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"paraneoplastic uveitis","secondary_identifiers":["Orphanet:279928","MEDGEN:1830109","UMLS:C5680786","GARD:21069"],"termid":"MONDO:0017212","xrefs":{"Monarch":{"xref_id":"0017212"}}}


id: PBO:0041654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 4","termid":"PBO:0041654"}


id: PBO:0073696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle and kinetochore associated complex subunit 2","termid":"PBO:0073696"}


id: GO:0048782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"negative regulation of pigment cell differentiation","termid":"GO:0050941"},{"relation_name":"negatively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cyanophore differentiation","synonyms":[{"name":"down regulation of cyanophore differentiation","type":"exact"},{"name":"down-regulation of cyanophore differentiation","type":"exact"},{"name":"downregulation of cyanophore differentiation","type":"exact"},{"name":"inhibition of cyanophore differentiation","type":"narrow"}],"termid":"GO:0048782"}


id: PBO:0041172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruton tyrosine kinase","termid":"PBO:0041172"}


id: FYPO:0007217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in regions containing protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:31260531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0001442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3-K9 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 acetylation at protein-coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 acetylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007217"}


id: MONDO:0000787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Solanum lycopersicum.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete tomato allergy (obsolete MONDO:0000787)","secondary_identifiers":["DOID:0060512"],"synonyms":[{"name":"Solanum lycopersicum allergic disease","type":"exact"},{"name":"Solanum lycopersicum caused allergic disease","type":"exact"},{"name":"Solanum lycopersicum fruit allergy","type":"exact"},{"name":"allergy of Solanum lycopersicum","type":"exact"}],"termid":"MONDO:0000787","xrefs":{"Monarch":{"xref_id":"0000787"}}}


id: GO:0032331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chondrocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chondrocyte differentiation","termid":"GO:0032330"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of cartilage development","termid":"GO:0061037"},{"relation_name":"negatively_regulates","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chondrocyte differentiation","synonyms":[{"name":"down regulation of chondrocyte differentiation","type":"exact"},{"name":"down-regulation of chondrocyte differentiation","type":"exact"},{"name":"downregulation of chondrocyte differentiation","type":"exact"},{"name":"inhibition of chondrocyte differentiation","type":"narrow"}],"termid":"GO:0032331"}


id: FYPO:0007290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-glucose 4-epimerase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal UDP-glucose 4-epimerase activity","termid":"FYPO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased UDP-glucose 4-epimerase activity","synonyms":[{"name":"reduced UDP-glucose 4-epimerase activity","type":"exact"}],"termid":"FYPO:0007290"}


id: SO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site considered part of the normal chromosomal structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"common_fragile_site","termid":"SO:0002350"}


id: PBO:0066206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 20","termid":"PBO:0066206"}


id: PBO:0070758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 14","termid":"PBO:0070758"}


id: MONDO:0023134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Febrile ulceronecrotic Mucha-Habermann disease (FUMHD) is a rare and severe form of pityriasis lichenoides et varioliformis acuta (PLEVA). PLEVA is characterized by skin lesions that ulcerate, breakdown, form open sores, then form a red-brown crust. FUMHD often begins as PLEVA, but then rapidly and suddenly progresses to large, destructive ulcers. There may be fever and extensive, painful loss of skin tissue as well as secondary infection of the ulcers. Diagnosis of FUMHD is confirmed by biopsy of skin lesions. FUMHD occurs more frequently in children, peaking at age 5 to 10. Males tend to be affected more often than females. While some cases of FUMHD have resolved without therapy, others have resulted in death. Early diagnosis and prompt treatment may help to reduce morbidity and death.","definition_xrefs":["GARD:0009516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lichenoid pityriasis","termid":"MONDO:0024250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"febrile ulceronecrotic Mucha-Habermann disease","secondary_identifiers":["SCTID:402860008","icd11.foundation:1408299147","MEDGEN:266145","GARD:9516","UMLS:C1274297","MESH:C537077"],"synonyms":[{"name":"A severe variant of pityriasis lichenoides et varioliformis acuta (PLEVA)","type":"related"},{"name":"FUMHD","type":"related"},{"name":"febrile ulceronecrotic Mucha-Habermann disease","type":"exact"},{"name":"febrile ulceronecrotic pityriasis lichenoides acuta","type":"exact"},{"name":"ulceronecrotic Mucha-Habermann disease","type":"related"},{"name":"variant of Mucha-Habermann disease","type":"related"}],"termid":"MONDO:0023134","xrefs":{"Monarch":{"xref_id":"0023134"}}}


id: PBO:0058875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10226","termid":"PBO:0058875"}


id: PR:Q9UTB1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rcf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTB1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 domain-containing protein C25B8.07c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.07c","synonyms":[{"name":"Spom972h-rcf1","type":"exact"}],"termid":"PR:Q9UTB1"}


id: PATO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer not being suitable for use as food.","definition_xrefs":["PATOC:VO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"edibility","termid":"PATO:0002138"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inedible","termid":"PATO:0002140"}


id: PBO:0064404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic lipase related protein 2 (gene/pseudogene)","termid":"PBO:0064404"}


id: PBO:0044361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 49","termid":"PBO:0044361"}


id: PBO:0110360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENR pseudogene 4","termid":"PBO:0110360"}


id: PBO:0113191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major ADP/ATP carrier of the mitochondrial inner membrane; exchanges cytosolic ADP for mitochondrially synthesized ATP; also imports heme and ATP; also functions in peroxisomes; required for viability in many lab strains that carry a sal1 mutation; PET9 has a paralog, AAC3, that arose from the whole genome duplication; human homolog SLC25A4 implicated in progressive external ophthalmoplegia can complement yeast null mutant","termid":"PBO:0113191"}


id: GO:0051340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate. Ligase is the systematic name for any enzyme of EC class 6.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ligase activity (obsolete GO:0051340)","synonyms":[{"name":"ligase regulator","type":"exact"}],"termid":"GO:0051340"}


id: PBO:0034669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_sumoylated_protein_in_cell","termid":"PBO:0034669"}


id: PBO:0064622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU6F2 antisense RNA 2","termid":"PBO:0064622"}


id: PBO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 10 receptor subunit alpha","termid":"PBO:0051556"}


id: FYPO:0004320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of DNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered DNA level","synonyms":[{"name":"abnormal DNA content","type":"exact"},{"name":"abnormal DNA level","type":"exact"},{"name":"altered DNA content","type":"exact"},{"name":"altered cellular DNA level","type":"exact"}],"termid":"FYPO:0004320"}


id: GO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a cytosine residue to uridine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytidine to uridine editing","secondary_identifiers":["Reactome:R-HSA-72200"],"termid":"GO:0016554"}


id: PBO:0067129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 176, pseudogene","termid":"PBO:0067129"}


id: PBO:0045809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1","termid":"PBO:0045809"}


id: MONDO:1012260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinal dysraphism, non-human animal","termid":"MONDO:1011671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal dysraphism, cattle","secondary_identifiers":["OMIA:000938-9913"],"termid":"MONDO:1012260","xrefs":{"Monarch":{"xref_id":"1012260"}}}


id: GO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catenin complex alpha subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"alpha-catenin binding","termid":"GO:0045294"}


id: GO:0141152
data:
  {"annotated_genes":["SJAG_00409","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62942,69556],"is_not":false,"summary":null,"term":"GO:0141152"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + sn-glycerol 3-phosphate = dihydroxyacetone phosphate + H+ + NADH.","definition_xrefs":["RHEA:11092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:1.1.1.8-RXN","EC:1.1.1.8","KEGG_REACTION:R00842"],"synonyms":[{"name":"L-alpha-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-alpha-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerol phosphate dehydrogenase activity","type":"broad"},{"name":"L-glycerophosphate dehydrogenase activity","type":"broad"},{"name":"NAD-L-glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-alpha-glycerophosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-dependent glycerol-3-phosphate dehydrogenase activity","type":"exact"},{"name":"NAD-linked glycerol 3-phosphate dehydrogenase activity","type":"exact"},{"name":"NADH-dihydroxyacetone phosphate reductase activity","type":"exact"},{"name":"alpha-glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"alpha-glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol 1-phosphate dehydrogenase activity","type":"broad"},{"name":"glycerol phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"glycerol-3-phosphate dehydrogenase [NAD+] activity","type":"exact"},{"name":"glycerophosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"hydroglycerophosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0141152","terms_by_termid":{"GO:0141152":null}}


